BLACK COTTONWOOD P450S ACCESSION NUMBERS 566 models complete shown in yellow

Last modified Mar. 7, 2005 David R. Nelson

Made some minor name revisions on 8/24/2006 mostly v1, v2 changes to P1, P2 etc.

Complete list of P450s found by blast searches, yellow are finished assembled seqs.

cyan seqs have a model that is retrieved and in a sequence file of cottonwood P450s.

Many of the models are short or otherwise wrong.

566 total cottonwood sequences, 566 assembled, all P450 models (524) retrieved. Some P450 sequences have no models at JGI. Two adjacent models are sometimes from a single gene. Some JGI models fuse two different genes into a hybrid gene.

one bacterial contamination = scaf_2810. A CYP39 contamination = scaffold_11900.

61 sequences were found in the JGI annotation but not in my first 5-6 blast searches

53 sequences in my blast output had no P450 models in JGI

searched with 85A 90A 71B2 97A3 72A7

Sequences in the 53 families shown in Blue have been assigned names.

All 566 sequences are named.

Plant P450s sort into 62 families in 10 clans.

Clans are clusters of related families.

Six clans have only one family CYP51 (2), CYP74 (9), CYP97 (3), CYP710 (1),

CYP711 (3), CYP727 (2)

(20 sequences in this group) All have been assembled and named.

All members of these 6 one family clans have been assembled

Parentheses show how many sequences are in the collection for each family.

These numbers include pseudogenes and possible duplicate sequences, so the

count of full length functional sequences is less.

All sequences have been shown as belonging to one of the 62 plant families,

or CYP749, the only new plant family in cottonwood (CYP72 clan).

The CYP71 clan has 26 families, some are specific for other taxa like CYP99,

CYP719, CYP723, CYP726. That leaves 22 families.

CYP71 (66), CYP73 (4), 75 (3), 76 (17), 77 (4), 78 (14), 79 (6), 80 (8), 81 (50),

82 (36), 83(21), 84 (4), 89 (19), 92(13), 93 (9), 98 (6), 701 (1), 703 (2), 705 (8),

706 (5), 712 (7), 736 (25) these are now all assembled. (328 sequences in this clan)

The CYP72 clan has 8 families. All are present in cottonwood. CYP72 (21), 709 (2),

714 (7), 715 (3), 721 (13), 734 (2), 735 (2), 749(18) All are assembled.

(68 sequences in this clan)

The CYP85 clan has 16 families. CYP702, 708 and CYP725 seem to be absent in Populus.

That leaves 13 families. CYP85 (4), 87 (20), 88 (4), 90 (9), 707 (8), 716 (27),

718 (2), 720 (1), 722 (2), 724 (2), 728 (17), 729 (2), 733 (1). These have all been assembled and named. (99 sequences in this clan)

The CYP86 clan has 7 families. CYP730, CYP731 and CYP732 are only found in rice so

far. There are 4 families in cottonwood CYP86 (9), CYP94 (16), CYP96 (11) and

CYP704 (15). All members of the CYP86 clan have been assembled and named.

(51 sequences in this clan)

All 566 sequences are now assembled.

Scaffold_2810 is a bacterial contamination from another JGI genome Ralstonia metallidurans. (100% match)

Scaffold_11900 is a CYP39 contamination, most like chicken CYP39.

Most CYP71 clan members have only one intron in the middle region, making them fairly

easy to assemble. The CYP701 family is an exception, and it should belong in another

clan.

LG_I (-) 174753-172748 CYP716D1 46% to 716A1

LG_I (-) 178465-176158 CYP716D2v1 47% to 716A1

LG_I (-) 185470-183274 CYP716D3v1 47% to 716A1

LG_1 (-) 183202-183113 CYP716D3-de1bv1 partial exon 1 pseudogene -de1b

LG_I (-) 1663727-1659176 CYP727B1 44% TO CYP727A1 85% to 727B2

LG_I (+) 2171265-2172908 CYP80E1 39% to 76C4

LG_I (-) 3924905-3921817 CYP78D3v1 51% to 78A5

LG_I (-) 4925909-4924104 CYP51G1

LG_I (+) 6124306-6126694 CYP78A22 68% to 78A9

LG_I (-) 8142817-8140384 CYP87A7 76% to 87A2 ortholog?

LG_I (+) 8155946-8158046 CYP80E2 41% to 76G1

LG_I (-) 8580345-8578719 CYP76F3 47% to 76C4

LG_I (-) 16937584-16936049 CYP86A18 78% to 86A1 Arab. 90% to 86A19

LG_I (+) 17454906-17459858 CYP707A9 69% to 707A2

LG_I (-) 19620275-19616562 CYP87D1P N-term and C-term only (seq gap)

LG_I (-) 19635300-19632986 CYP87D2v1 45% to 87A2

LG_I (-) 19665613-19663169 CYP87D3 97% to scaf_9597

LG_I (-) 19679729-19677282 CYP87D4 44% to 87A2

LG_I (-) 19683439-19680773 CYP87D5 50% to 87A2

LG_I (-) 19703740-19702073 CYP705B6 44% to 705A2

LG_I (+) 19811612-19812590 CYP71B44P like pseudogene 51% to 71B36

LG_I (+) 19972937-19975122 CYP75A11 80% to 75A8 87% to CYP75A12

LG_I (-) 20250132-20251678 CYP94F1 46% to 94D22

LG_I (+) 20278749-20279837 CYP87D6P 74% to LG_IX (+) 1537124

LG_I (-) 22500323-22497486 CYP724B8 55% to 724B1, 52% to 724B7

LG_I (-) 23341018-23339071 CYP82J1 50% to 82C2

LG_I (-) 23611288-23610335 CYP82J1P

LG_I (-) 23945857-23944313 CYP94B7 61% to 94B2

LG_I (-) 24001619-24000402 CYP89A25 53% to 89A5

LG_I (-) 29491328-29490406 CYP71D36Pv1 PSEUDOGENE 61% TO CYP71D26

LG_I (-) 29497891-29497622 CYP71D35Pv1 pseudogene no model exists

LG_I (-) 29516258-29514652 CYP71D34 93% to CYP71D28v1 52% to 71D10

LG_I (-) 29524379-29524047 CYP71D33P pseudogene

LG_I (-) 29530020-29529344 CYP71D32P pseudogene

LG_I (-) 29532948-29532496 CYP71D31P pseudogene

LG_I (-) 29540735-29539563 CYP71D30P pseudogene

LG_I (-) 29575643-29574039 CYP71D29 54% to 71D11 93% to 71D34

LG_I (-) 29606262-29604787 CYP71D28v1 55% to 71D11

LG_II (+) 611387-613607 CYP87D7P pseudogene 47% to 87A2

LG_II (-) 1594296-1594132 CYP83F1-se1[1] pseudogene N-term fragment

LG_II (-) 1597238-1596704 CYP83F1-se2[1] pseudogene no gene model exists

LG_II (-) 1617938-1616292 CYP83F1 53% to 83A2, 97% to 83F4, 72% to 83F2

LG_II (+) 1630135-1630206 CYP83F2-se1[1] N-term fragment

LG_II (+) 1650845-1651086 CYP83F2-se2[2] pseudogene no gene model exists

LG_II (+) 1655600-1657684 CYP83F2 48% to 83A2, 96% to 83F3

LG_II (+) 1667099-1667266 CYP83F2-se3[2] pseudogene 100% to LG_II 1702772

LG_II (+) 1671977-1672045 CYP83F2-se4[1] N-term fragment

LG_II (+) 1685541-1685612 CYP83F2-se5[1] N-term fragment

LG_II (+) 1688396-1689904 CYP83F3v3 95% to 83F3v1

LG_II (+) 1697711-1697881 CYP83F3-se1[2] pseudogene no gene model exists

LG_II (+) 1702691-1702858 CYP83F3-se2[2] pseudogene no gene model exists

LG_II (+) 1707953-1708189 CYP83F3v1-de1b detritus exon 1

LG_II (+) 1708840-1710924 CYP83F3v1 48% to 83A2, 96% to 83F2, 63% to 83F5

LG_II (+) 2131180-2134259 CYP722A1 61% to 722A1 46% to 722B1 in rice

LG_II (+) 2695301-2696854 CYP94A11 67% to 94A4, 85% to 94A9v1

LG_II (+) 2705673-2707202 CYP94A12 67% to 94A4, 83% to 94A9v1

LG_II (-) 4100255-4098382 CYP718A1 67% to 718A1 Arab. = ortholog

LG_II (+) 4123900-4125604 CYP78A20 67% to 78A7

LG_II (+) 4750944-4753397 CYP733A1 70% to rice 733A1 = ortholog

LG_II (-) 9145798-9143865 CYP81B5 50% to 81D8

LG_II (-) 9151207-9149369 CYP81B4 49% to 81D2

LG_II (-) 9154259-9152268 CYP81B3v1 47% to 81D8

LG_II (+) 9173256-9175652 CYP81C5 51% to 81K1

LG_II (+) 9525988-9529091 CYP707A14 69% to 707A4

LG_II (-) 9774605-9770969 CYP701A11 68% to 701A3

LG_II (-) 9856083-9854503 CYP74A1

LG_II (-) 10070853-10066188 CYP721A3 53% to 721A1 no correct model exists

LG_II (-) 10420336-10419995 CYP714E3P no correct model exists 69% to 714E2

LG_II (+) 11243028-11244627 CYP76T1 51% to 76C4

LG_II (+) 11302436-11304039 CYP76T2 50% to 76C4

LG_II (+) 11339047-11340633 CYP76T3 52% to 76C4

LG_II (+) 11361815-11362516 CYP76T4 partial seq

LG_II (+) 11370278-11371869 CYP76T5 52% to 76C4

LG_II (-) 13208335-13206633 CYP703A4 78% to 703A2

LG_II (+) 13511138-13512986 CYP78A24 72% to 78A9

LG_II (-) 16041237-16040849 CYP79D10P 78% to 79D8

LG_II (-) 16609905-16609795 CYP82C-se3[2] pseudogene no gene model exists

LG_II (+) 24351775-24351969 CYP721A-se1[4] no gene model exists

LG_II (+) 24360275-24360469 CYP721A-se2[4] C-term, no model exists

LG_II (+) 24440445-24442978 CYP721A2v1 100% to scaffold_1746

LG_III (+) 3591921-3593661 CYP92A21 3 aa diffs to LG_III (+) 3610917

LG_III (+) 3593032-3593661 CYP92A20P duplicate of exon 2

LG_III (+) 3610917-3612657 CYP92A20 63% to 92A9

LG_III (+) 3641419-3641829 CYP92A19P

LG_III (+) 3649066-3651041 CYP92A19 71% to 92A9

LG_III (+) 10170571-10172100 CYP89A26 48% to 89A5 no introns

LG_III (+) 11000576-11004081 CYP706D1

LG_III (+) 11353007-11354677 CYP76F4 47% to 76C4

LG_III (-) 11661882-11664294 CYP87A8 76% to 87A2

LG_III (-) 12109591-12107981 CYP86A21 74% to 86A7 Arab. 76% to 86A20

LG_III (-) 13439255-13437042 CYP78A23 68% to 78A9

LG_III (+) 14476000-14477787 CYP51G5

LG_III (+) 15447061-15449577 CYP78D2 50% to 78A5

LG_III (+) 17762390-17766956 CYP727B2 43% TO CYP727A1 85% to 727B1

LG_IV (+) 521696-523425 CYP728D7v1 74% to 728D4

LG_IV (+) 526815-528578 CYP728D8 54% to 728B3

LG_IV (-) 589294-587777 CYP77B3 68% to 77B1 no introns 71% to CYP77B4

LG_IV (+) 605695-607218 CYP77B4 66% to 77B1 no introns 71% to CYP77B3

LG_IV (+) 3871814-3873941 CYP79D8 56% to 79D1, 73% to 79D5

LG_IV (+) 5434809-5437753 CYP735A6 69% to 735A1, 91% to 735A5

LG_IV (+) 7961227-7961940 CYP81S10P

LG_IV (+) 8826205-8827922 CYP82L1 55% to 82G1

LG_IV (-) 10881282-10879750 CYP710A12 68% to 710A1

LG_IV (+) 13600264-13602937 CYP85A1 68% to CYP85A1 Arab., 90% to 85A3

LG_IV (+) 13604641-13606601 CYP85A1P duplicate of exons 2-8 100% identical

LG_IV (+) 13987032-13988462 CYP74C6v1 79% to CYP74C8

LG_IV (+) 13991961-13993406 CYP74C7 78% to 74C6v1

LG_IV (+) 14183519-14183770 CYP87D-se2[6:7] exons 6,7 identical to scaff_12583

LG_IV (+) 15006407-15008324 CYP84A13P pseudogene 65% to 84A1

LG_IV (-) 16503207-16503109 CYP87D11 44% to 87A2

LG_V (+) 371877-373430 CYP96F1 46% to 96A10

LG_V (+) 388448-390004 CYP96F2 45% to 96A10

LG_V (-) 490310-489234 CYP87D13P pseudogene partial

LG_V (+) 1583967-1585490 CYP89A18 63% to 89A5

LG_V (-) 1989840-1988143 CYP78A18 70% to 78A7

LG_V (+) 2585685-2588232 CYP86B4 72% to 86B1 92% to 86B5

LG_V (-) 2790530-2789037 CYP96G1 42% to 96A16, 39% to 96A8

LG_V (+) 5628907-5630507 CYP81S7 55% to 81D8

LG_V (+) 5648929-5650535 CYP81S8 51% to 81D8

LG_V (+) 5671068-5672773 CYP81S9 51% to 81D1

LG_V (-) 13684462-13682757 CYP78A19 68% to 78A7

LG_V (+) 13756134-13757679 CYP718A2P pseudogene 80% to 718A1 Populus

LG_V (+) 15327217-15328314 CYP94A9v2 72% to 94A4, 1 aa diff to 94A9v1

LG_V (-) 15969731-15965354 CYP722A2P pseudogene 67% to 722A1 Populus

LG_V (-) 16417765-16416052 CYP83F5 50% to 83A2, 62% to 83F1

LG_V (-) 16414413-16413906 CYP83F5-de2bv1 pseudogene

LG_VI (-) 451262-445524 CYP97B7 79% to 97B4, 75% to 97B3

LG_VI (-) 1075479-1074052 CYP71-un3 potri pseudogene

LG_VI (-) 1500143-1497695 CYP709F1 47% to 709B1

LG_VI (-) 1982315-1979658 CYP98A27 81% to 98A3

LG_VI (+) 2012189-2013688 CYP94D22 60% to 94D2 Arab.

LG_VI (-) 5146670-5145983 CYP73A45P pseudogene 82% to 73A44

LG_VI (-) 5680025-5678363 CYP716A8 62% to 716A2

LG_VI (+) 6134143-6134717 CYP71D46P 52% to 71D38

LG_VI (-) 6443611-6441801 CYP76A8 49% to 76G1

LG_VI (+) 9538846-9541818 CYP734A9 78% to 734A1 (= old 72B1) 88% to 734A10

LG_VI (+) 11287066-11288715 CYP712A6 55% to 712A1

LG_VI (-) 15175313-15172776 CYP711A3 72% to 711A1, 90% to 711A2

LG_VII (-) 307725-307385 CYP704A10-se5d6d pseudogene 1aa diff to 704A10

LG_VII (+) 1874399-1875984 CYP81S13 52% to 81D8

LG_VII (+) 4351919-4358145 CYP89A17 63% to 89A5

LG_VII (+) 4652216-4653805 CYP736A1v1 53% to 736A1

LG_VII (+) 4667173-4668746 CYP736A4v1 53% to 736A1

LG_VII (+) 4685384-4686979 CYP736A5v1 52% to 736A1

LG_VII (+) 4700002-4701575 CYP736A6P1 2 frameshifts and 1 stop codon

LG_VII (+) 4706173-4707749 CYP736A6P2 2 frameshifts and 1 stop codon

LG_VII (+) 4725314-4725388 CYP736A7P1-de2b C-term fragment

LG_VII (+) 4728397-4729273 CYP736A7P1

LG_VII (+) 4782357-4782458 CYP736A-se1[1] N-term only

LG_VII (+) 4796192-4796347 CYP736A-se2[1] N-term no model exists

LG_VII (+) 4799802-4800209 CYP736A-se3[2] C-term

LG_VII (+) 4834273-4835846 CYP736A8v1 54% to 736A1

LG_VII (+) 4847468-4849041 CYP736A9 54% to 736A1

LG_VII (+) 4864410-4865111 CYP736A10Pv1 missing C-term

LG_VII (+) 4873686-4875265 CYP736A11 54% to 736A1

LG_VII (-) 5114877-5113187 CYP78A21v1 69% to 78A7

LG_VII (-) 5203243-5201726 CYP96A17 54% to 96A10

LG_VII (-) 5753477-5751477 CYP71D43 43% to 71B33

LG_VII (-) 5804810-5802796 CYP71D42/CYP71D44 same gene 49% to 71D4

LG_VII (+) 5888964-5891028 CYP71D41 43% TO 71B33

LG_VII (+) 6192453-6195080 CYP86B5 74% to 86B1 92% to 86B4

LG_VII (-) 9437395-9434788 CYP92A22 63% to 92A9

LG_VII (+) 10101681-10103846 CYP721A9P pseudogene exons 1 and 3

LG_VII (+) 10780123-10780564 CYP749A11P pseudogene 65% to CYP749A7

LG_VII (+) 10675275-10680393 CYP90B7 92% to scaf_57 90B seq

LG_VII (+) 11271727-11277154 CYP90C3 63% to 90C1

LG_VII (+) 11484731-1486533 CYP84A11 73% to 84A1

LG_VII (+) 12626860-12628510 CYP716A10 71% to scaffold_164 (-) 229701

LG_VIII (-) 1164925-1163381 CYP77A10 no introns 72% to 77A4

LG_VIII (-) 1227617-1225656 CYP714E5 duplicate of LG_VIII (-) 1236190

LG_VIII (-) 1236190-1234228 CYP714E6 45% to 714A1 51% to 714C2

LG_VIII (+) 3862555-3866960 CYP90A6 77% to 90A1

LG_VIII (+) 4083957-4088046 CYP90A6P 100% to LG_VIII (+) 3862555

LG_VIII (+) 5139033-5140582 CYP71D27 51% to 71D4 59% to LG_I.29

LG_VIII (-) 5534676-5532241 CYP704B3 77% to 704B1

LG_VIII (+) 6182991-6184553 CYP89A23 56% to 89A4

LG_VIII (-) 8088062-8086557 CYP96H1

LG_VIII (+) 12396377-12399637 CYP86C5v2 only 2 aa diffs to 86C5v1 (duplicate)

LG_VIII (-) 12460686-12458958 CYP71B42P pseudogene

LG_VIII (-) 12479032-12476806 CYP71B41 54% to 71B36

LG_VIII (-) 12482829-12482572 CYP71B41-de1 pseudogene N-term only

LG_VIII (-) 12489221-12487004 CYP71B40v1 53% to 71B36

LG_VIII (-) 12534486-12532739 CYP71B39P pseudogene

LG_VIII (-) 12547429-12545187 CYP71B38 54% to 71B36

LG_VIII (-) 14685512-14683933 CYP81S14v1 53% to 81D8

LG_IX (+) 340405-340566 CYP78D-se1[2] pseudogene

LG_IX (+) 1428300-1429772 CYP94C5 64% to 94C1 no introns

LG_IX (-) 1437687-1437347 CYP704A10-se5c6c pseudogene 1aa diff to 704A10

LG_IX (+) 1537124-1539316 CYP87D8 46% to 87A2

LG_IX (-) 2646866-2644256 CYP84A12 69% to 84A1

LG_IX (-) 3544141-3542158 CYP82C15v1 49% to 82C2

LG_IX (-) 3494707-3493259 CYP74C8 64% to 74C2 Cucumis melo

LG_IX (-) 3941290-3938759 CYP707A11 74% to 707A4

LG_IX (-) 6112639-6110882 CYP75A12 87% to CYP75A11

LG_IX (+) 6276537-6278244 CYP705B1 46% to 705A2

LG_IX (+) 6288042-6289749 CYP705B2 46% to 705A2

LG_IX (+) 6356567-6357732 CYP705B3P pseudogene 48% to 705A12

LG_IX (+) 6358443-6360623 CYP705B4P pseudogene 44% to 705A2

LG_IX (+) 6367706-6369461 CYP705B5 45% to 705A2

LG_IX (+) 6379157-6382449 CYP87D9 49% to 87A2

LG_IX (+) 6392855-6394949 CYP87D10 45% to 87A2

LG_IX (-) 7878845-7877310 CYP86A19 78% to 86A1 Arab. 90% to 86A18

LG_IX (+) 8486677-8491505 CYP707A10 72% to 707A2

LG_IX (+) 11607769-11608171 CYP749A13P pseudogene 48% to CYP749A4

LG_X (+) 6643814-6645403 CYP86C6 62% to CYP86C1, no introns, 89% to 86C5v1

LG_X (-) 6735316-6733923 CYP71B45P pseudogene 75% to CYP71B42P

LG_X (-) 6738703-6736564 CYP71B43P 52% to 71B36

LG_X (-) 7735686-7735582 CYP82C-se4[2] pseudogene

LG_X (+) 11790272-11792193 CYP714F1 49% to 714E5 38% to 714A2

LG_X (+) 11955163-11963106 CYP96H2P pseudogene 60% to CYP96H1

LG_X (-) 13512686-13510704 CYP749A3P pseudogene

LG_X (-) 13518234-13516106 CYP749A4 68% to CYP749A2

LG_X (-) 13523547-13521574 CYP749A5 60% to CYP749A2

LG_X (-) 13525095-13524907 CYP749A5-de1b exon 1 pseudogene fragment

LG_X (-) 13533480-13527660 CYP749A6 59% to CYP749A2

LG_X (-) 13534846-13534553 CYP749A7-de4b exon 4 pseudogene fragment

LG_X (-) 13538031-13535767 CYP749A7 57% to CYP749A2

LG_X (-) 13541431-13540251 CYP749A8P partial pseudogene

LG_X (-) 13544471-13542249 CYP749A9 56% to CYP749A2

LG_X (-) 13547164-13545930 CYP749A10P 70% to CYP749A9

LG_X (-) 14547286-14543918 CYP85A4 55% to 85A1 Arab. 61% to tomato 85A1

LG_X (-) 15267076-15268515 CYP704B4P pseudogene 72% to 704B3

LG_X (-) 16928514-16924549 CYP90A7 94% to LG_VIII, 78% to 90A1 Arab.

LG_X (-) 19404794-19403073 CYP712A4P

LG_X (+) 20920639-20921376 CYP94C8P 2 aa diffs to CYP94C8v1 assembly error?

LG_X (+) 20930872-20932371 CYP94C8 60% to 94C1, no introns

LG_X (-) 21015073-21015481 CYP77A11P pseudogene

LG_XI (-) 41591-40200 CYP728D1P pseudogene 73% to LG_XI 46116-43045

LG_XI (-) 46116-43045 CYP728D2 50% to 728B1

LG_XI (-) 49088-47266 CYP728D3P pseudogene 48% to 728B1

LG_XI (-) 53775-51945 CYP728D4 49% to 728B1

LG_XI (-) 11397146-11394711 CYP72D1 49% to 72A8

LG_XI (-) 11404336-11402643 CYP72D2 missing exon 1 and part of exon 2

LG_XI (-) 12867601-12867395 CYP71-un5 potri pseudogene

LG_XI (+) 12873790-12874128 CYP71D37P EXXR to the end with deletions

LG_XI (+) 12875195-12876930 CYP71D38 47% to 71Y1

LG_XI (+) 12884309-12886030 CYP71D39 47% to 71K8

LG_XI (+) 12892840-12894465 CYP71D40P 46% to 71K8

LG_XI (-) 13358321-13356572 CYP728D5 55% to 728B3

LG_XI (-) 13365751-13358706 CYP728D6P 52% to 728B1 pseudogene

LG_XI (+) 14624830-14626505 CYP716C1 47% to 716A2

LG_XII (-) 8738627-8735696 CYP729A3 52% to 729A1

LG_XII (-) 10752455-10550851 CYP71AN4 44% to 71A22 65% to CYP71AN5

LG_XII (+) 10772698-10774358 CYP71AP1 44% to 71B2 98% to CYP71AP2

LG_XII (+) 10777737-10779397 CYP71AP2 43% to 71B2 98% to CYP71AP1

LG_XII (+) 10791887-10793547 CYP71AP3 42% to 71B2 95% to CYP71AP1

LG_XII (-) 11326129-11324600 CYP94B6 62% to 94B3 Arab.

LG_XII (-) 12462598-12462165 CYP728F1-se2[3:4]v1 49% to 728C1

LG_XII (-) 12797236-12793955 CYP715A2 64% to 715A1

LG_XII (-) 13076542-13074912 CYP80C1 45% to 76C2 49% to 80B2

LG_XII (-) 13087162-13085557 CYP80D2 42% to 76C2

LG_XII (-) 13100933-13099325 CYP80D1 41% to 76C2

LG_XII (-) 13112302-13111922 CYP80D-se1[1]

LG_XII (-) 13549852-13546391 CYP704A12 possible pseudogene 60% to 704A11

LG_XIII (-) 1795947-1794304 CYP93B7 43% to 93D1

LG_XIII (-) 6200373-6197990 CYP75B11 75% to 75B1

LG_XIII (-) 6515028-6513496 CYP94C7 58% to 94C1

LG_XIII (-) 6605099-6603552 CYP89A11 like 60% to 89A5

LG_XIII (-) 6638846-6637305 CYP89A12 like 63% to 89A5

LG_XIII (-) 6648270-6646729 CYP89A13 like 63% to 89A5

LG_XIII (-) 8092103-8090977 CYP728D10P pseudogene

LG_XIII (-) 8094512-8092845 CYP728D11P pseudogene

LG_XIII (-) 8108137-8108927 CYP728D9P pseudogene 41% to 728B2

LG_XIII (+) 12617173-12619036 CYP79D5 58% to 79D1

LG_XIII (+) 12759202-12761064 CYP79D6v1 57% to 79D1 95% to 79D5

LG_XIII (+) 12783206-12785069 CYP79D7 58% to 79D1, 99% to 79D5

LG_XIII (-) 12825303-12821368 CYP73A42 85% to 73A5, 96% TO 73A43, 2 introns,

LG_XIII (+) 13030170-13032201 CYP714E4 46% to 714A1 53% to 714C2

LG_XIII (+) 13095453-13098147 CYP88A8 69% to 88A4 83% to CYP88A9

LG_XIV (-) 930738-928767 CYP81B7 51% to 81D8

LG_XIV (+) 1587908-1590100 CYP704A9 64% to 704A2

LG_XIV (+) 1590589-1598508 CYP704A10 56% to 704A2

LG_XIV (+) 1600028-1600469 CYP704A11-de5b6b pseudogene 1 aa diff to 704A11

LG_XIV (+) 1602002-1602298 CYP704A10-de1b pseudogene 74% to 704A10

LG_XIV (+) 1611107-1611878 CYP704A10-de1c2c pseudogene 87% to 704A10

LG_XIV (+) 1624826-1627211 CYP704A11 90% to 704A10

LG_XIV (-) 2543966-2542269 CYP86A20 80% to 86A8 Arab. 76% to 86A21

LG_XIV (-) 3557159-3556743 CYP703A5P like pseudogene 76% to 703A4

LG_XIV (-) 3837010-3835172 CYP78A25 72% to 78A9

LG_XIV (-) 4631710-4630147 CYP709F2P pseudogene 48% to 709B2 N-term half

LG_XIV (-) 8217095-8213771 CYP74B7

LG_XIV (-) 9223410-9223207 CYP71-un1 potri 50% to 71AN4

LG_XIV (-) 9234477-9232794 CYP71-un2 potri

LG_XIV (-) 9847839-9845384 CYP724B7 68% to 724B1, 96% to 724B6

LG_XIV (-) 10688265-10685082 CYP88A9 72% to 88A3, 83% to CYP88A8

LG_XIV (-) 11123204-11115332 CYP721A8 55% to 721A1

LG_XV (+) 412465-414027 CYP89A22 52% to 89A5

LG_XV (-) 6427585-6426017 CYP71AN5 46% to 71B2 65% to CYP71AN4

LG_XV (+) 6442643-6444377 CYP71AQ1 49% to 71AJ1 47% to 71A12

LG_XV (+) 6453904-6455556 CYP71AP4 44% to 71B2 90% to CYP71AP1

LG_XV (-) 6502339-6500813 CYP96F3 44% to 96A1

LG_XV (-) 6509783-6507479 CYP96F4 44% to 96A1 one intron possible pseudogene

LG_XV (+) 7113294-7114921 CYP71D23P pseudogene 46% to 71D10

LG_XV (+) 7140835-7141622 CYP89A14P

LG_XV (+) 9617055-9618575 CYP96A16v1 1aa diff to CYP96A16v2 = same gene

LG_XV (-) 9642311-9641958 CYP704A13P pseudogene 75% to 704A12

LG_XV (-) 10046207-10044971 CYP80C2 43% to 76C2

LG_XV (+) 10373222-10376509 CYP715A3 62% to 715A1, 83% to 715A3

LG_XVI (+) 158690-159330 CYP71-un4 potri pseudogene

LG_XVI (-) 168971-167389 CYP82K1 49% to 82C4

LG_XVI (-) 1542608-1539021 CYP98A23 76% to 98A3

LG_XVI (+) 1587227-1588727 CYP94D23v1 64% to 94D2

LG_XVI (-) 3135000-3133112 CYP93A4 54% to 93D1

LG_XVI (-) 3142068-3136957 CYP93A7P pseudogene 89% to scaffold_152 (+) 155571

LG_XVI (-) 3144892-3142631 CYP712C1 51% to 712A2

LG_XVI (+) 3309276-3311130 CYP712A5 52% to 712A1

LG_XVI (+) 7802640-7803110 CYP705B7P pseudogene no gene model at JGI

LG_XVI (-) 13030394-13030137 CYP90B7P 1 aa diff to LG_VII 90B seq exon

LG_XVI (+) 13154281-13155936 CYP71AN1 44% to 71B10 98% to CYP71AN2

LG_XVI (+) 13161865-13163520 CYP71AN2v1 44% to 71A12 97% to CYP71AN3

LG_XVI (+) 13169467-13171129 CYP71AN3 44% to 71A12 97% to CYP71AN2

LG_XVIII (+) 838110-840693 CYP711A2 73% to 711A1 90% to 711A3

LG_XVIII (+) 2833441-2835456 CYP92A25 62% to 92A9

LG_XVIII (+) 12748216-12750034 CYP716A3 58% to 716A2

LG_XVIII (+) 12757052-12758882 CYP716A4 57% to 716A2

LG_XVIII (-) 12775733-12773417 CYP716A5 55% to 716A2

LG_XVIII (-) 12779490-12778023 CYP716A5P duplicate of LG_XVIII 12775733-12773417

LG_XVIII (-) 12823612-12821563 CYP716A6 53% to 716A2

LG_XVIII (-) 12848609-12849559 CYP716A7P 91% to LG_XVIII 12823612-12821563

LG_XIX (+) 1852415-1854550 CYP749A1v1 5aa diffs to scaffold_282

LG_XIX (+) 1877778-1879913 CYP749A2 5aa diffs to scaffold_282

LG_XIX (+) 7758422-7760477 CYP728E1 43% to 728B3

LG_XIX (+) 8392282-8394410 CYP749A14 gene model long at C-term

LG_XIX (-) 8996596-8994682 CYP716E3

LG_XIX (-) 9167061-9162988 CYP716E4

LG_XIX (+) 10989681-10992498 CYP73A43 84% to 73A5, 96% TO 73A42, 2 introns

scaffold_28 (+) 109106-109647 CYP72A50P pseudogene 55% to 72A8

scaffold_28 (-) 306996-304599 CYP92A24 59% to 92A9

scaffold_28 (-) 2755358-2750774 CYP97C4 79% to 97C1, 76% to 97C2 rice

scaffold_28 (+) 3042728-3044399 CYP76A9P pseudogene 41% to 76G1

scaffold_28 (+) 3040250-3041175 CYP76A9P-de2b two C-TERM fragments

scaffold_29 (+) 3163988-3165482 CYP89A27P pseudogene

scaffold_29 (+) 1864490-1864686 CYP88A-se1b2b N-term pseudogene

scaffold_40 (+) 651136-652849 CYP714E2 42% to 714A1 57% to medicago seq. 714E1

scaffold_40 (+) 1195920-1198457 CYP721A4 52% to 721A1

scaffold_40 (+) 1202028-1203778 CYP721A5 53% to 721A1

scaffold_40 (+) 1205348-1207795 CYP721A6P pseudogene

Scaffold_40 (+) 1480809-1482389 CYP74A5

scaffold_40 (-) 1522560-1520144 CYP82C11 gene model short at N-term

scaffold_40 (-) 1527266-1527180 CYP82C-se2[2] heme region 81% to scaf_40 (-) 1555735

scaffold_40 (-) 1533682-1531659 CYP82C10 gene model correct

scaffold_40 (-) 1539510-1539424 CYP82C-se1[2] heme region 81% to scaf_40 1555735

scaffold_40 (-) 1540989-1542721 CYP82D2 gene model correct

scaffold_40 (-) 1551888-1550208 CYP82C9P1 gene model short at N-term

scaffold_40 (-) 1555735-1555331 CYP82C8P3 gene model short

scaffold_40 (-) 1565307-1564681 CYP82C8P2 gene model short

scaffold_40 (-) 1572611-1572060 CYP82C7Pv1 N-term gene model short

scaffold_40 (-) 1585647-1585558 CYP82C5P N-term seq. no gene model at JGI

scaffold_40 (-) 1589818-1590441 CYP82C6P gene model short

scaffold_40 (-) 1598233-1596082 CYP82C5 gene model short

scaffold_40 (-) 2112435-2109420 CYP707A13 70% to 707A4

scaffold_40 (-) 2619478-2619248 CYP81T1-de2c pseudogene heme signature

scaffold_40 (-) 2622115-2620377 CYP81T1 49% to 81D2

scaffold_40 (-) 2620375-2620241 CYP81T1-de2b pseudogene repeat of C-term seq

scaffold_40 (-) 2625277-2624657 CYP81R5P exon 2

scaffold_40 (-) 2629530-2627051 CYP81R4 joined two

scaffold_40 (-) 2633172-2630892 CYP81C4 45% to 81A7

scaffold_40 (-) 2639518-2637241 CYP81C3 45% to 81A7

scaffold_40 (+) 2662475-2663559 CYP81B8P1 pseudogene

scaffold_40 (+) 2666003-2667947 CYP81B9P

scaffold_40 (+) 2671685-2672180 CYP81B-se1[2] exon 2

scaffold_40 (+) 2676659-2676886 CYP81B8P2 N-term

scaffold_40 (+) 2684818-2687264 CYP81B10 N-term

scaffold_40 (+) 2689865-2690096 CYP81B-se2[1]

scaffold_40 (+) 2691314-2693223 CYP81B11 51% to 81D8

scaffold_40 (+) 2695016-2695445 CYP81B-se3[1]

scaffold_40 (+) 2698671-2700987 CYP81B12 51% to 81D8

scaffold_40 (+) 2701996-2702187 CYP81B12-de2b

scaffold_41 (-) 1505394-1503478 CYP716E1

scaffold_41 (-) 1517260-1515291 CYP716E2

scaffold_44 (-) 1010414-1004762 CYP90D6 70% to 90D1, 90% to scaf 97

scaffold_57 (-) 1038584-1035782 CYP84A10 76% to 84A1

scaffold_57 (-) 1624555-1619874 CYP90B6 78% to 90B1 Arab.

scaffold_57 (+) 1939692-1940233 CYP72A49P pseudogene 51% to 72A8 92% to scaf_28

scaffold_64 (-) 865374-863615 CYP81R1 41% to 81K1

scaffold_64 (-) 881364-879605 CYP81R2 43% to 81K1

scaffold_64 (-) 903647-903045 CYP81R3P

Scaffold_66 (-) 45516-44044 CYP94C6 84% to 94C5, 60% to 94C1

scaffold_66 (+) 1246533-1246730 CYP87D12-de1b 58% to LG_IV (-) 16503207 exon 1

scaffold_66 (-) 1245680-1243218 CYP87D12 47% to 87A2

scaffold_70 (-) 879822-876621 CYP706C5

scaffold_70 (-) 1388718-1387837 CYP93B8P2 39% to 93D1, 40% to 93G1

scaffold_70 (-) 1392931-1392122 CYP93B8P1 100% to scaf_1994

scaffold_70 (+) 1407665-1410186 CYP93B8v1 39% to 93D1, 40% to 93G1

scaffold_70 (+) 1518015-1520473 CYP721A7v1 57% to 721A1

scaffold_86 (-) 269140-268941 CYP81S-se1[2]

scaffold_86 (-) 1256451-1254410 CYP707A15 81% to 707A1

scaffold_87 (+) 1294208-1317779 CYP97A7 79% to 97A3, 73% TO 97A4

scaffold_97 (+) 405069-409781 CYP90D5 67% to 90D1

Scaffold_107 (-) 283300-281741 CYP96F5 45% to 96A10, 54% to 96F1

Scaffold_118 (-) 331714-330901 CYP88A10P pseudogene

scaffold_122 (+) 199976-202441 CYP71D22 45% to 71D10

scaffold_122 (+) 221737-222360 CYP71D22P dup. 100% match to scaffold_122.5 exon 2

scaffold_123 (+) 684368-687253 CYP735A5 72% to 735A1, 91% to 735A6

scaffold_125 (-) 611455-6008432 CYP714A3 61% to 714A1

scaffold_127 (-) 281038-279097 CYP706B3 55% to 706B2

scaffold_127 (-) 288016-285624 CYP706C6 55% to 706C1

scaffold_130 (-) 112070-99249 CYP82C14P pseudogene 52% to 82C4

scaffold_130 (-) 704177-701738 CYP707A12v1 74% to 707A4

scaffold_142 (-) 468463-467483 CYP721A10P pseudogene

scaffold_142 (-) 531878-529641 CYP82L2 55% to 82G1

scaffold_150 (+) 437927-439595 CYP81S3 51% to 81D6

scaffold_150 (+) 506775-507275 CYP81S1v3

scaffold_150 (+) 551355-553284 CYP81S4 53% to 81D8

scaffold_150 (+) 562399-563313 CYP81S5P 52% to 81D6 exon 1 only

scaffold_150 (+) 567120-568973 CYP81S6 54% to 81D8

scaffold_152 (+) 143579-145208 CYP712A3v1 71% to 712A1

scaffold_152 (+) 146873-148630 CYP712C2 52% to 712A2

scaffold_152 (+) 154010-155780 CYP93A6 57% to 93D1

scaffold_152 (+) 158255-159380 CYP93A5P pseudogene 49% to 93D1

Scaffold_155 (+) 207254-210369 CYP85A3 68% to 85A1 Arab 90% to 85A1 Populus

scaffold_158 (-) 58842-57112 CYP92A17v1 72% to 92A9

scaffold_158 (-) 69821-67869 CYP92A18 61% to 92A9

scaffold_164 (-) 229701-227818 CYP716A9 59% to 716A1

scaffold_164 (-) 228000-227824 CYP716A9-de3b C-term frag.

Scaffold_164 (+) 432328-434026 CYP73A44 65% to 73A5, 66% to 73A42 and 73A43

scaffold_168 (-) 422324-421987 CYP72A44-de5d exon 5 partial

scaffold_168 (-) 433348-432950 CYP72A44-de5c exon 5 partial

scaffold_168 (-) 448326-445219 CYP72A44 intact

scaffold_168 (-) 450449-450213 CYP72A44-de5b exon 5 partial no model in JGI

scaffold_168 (-) 466085-463913 CYP72A43 intact

scaffold_168 (-) 532526-506314 CYP72A42v1 intact with large first intron

scaffold_168 (-) 534371-533954 CYP72A42-de5b exon 5 only

scaffold_170 (+) 28364-30438 CYP749A12P pseudogene 73% to CYP749A6

scaffold_173 (+) 109052-112871 CYP82J2P pseudogene no gene model in JGI

scaffold_184 (+) 330890-333481 CYP720A1 72% to 720A1 Arab. = ortholog

scaffold_202 (+) 109027-110710 CYP716C2v1 45% to 716A2

scaffold_205 (-) 34570-32904 CYP81S12v1 49% to 81D8

scaffold_205 (-) 68149-59691 CYP81S11 56% to 81D3 7kb intron

scaffold_215 (-) 197710-194686 CYP734A10 78% to 734A1 (= old 72B1) 88% to 734A9

scaffold_228 (-) 35436-34671 CYP71D24P exon 1 pseudogene

scaffold_228 (-) 39599-38903 CYP71D25P exon 1 pseudogene

scaffold_228 (-) 105939-104306 CYP71D26 45% to 71B23

scaffold_232 (+) 223237-225013 CYP728F1 43% to 728B3

scaffold_232 (+) 269360-269428 CYP728F1-se1[3] duplicate exon 3 of scaf_232

scaffold_236 (+) 135347-136367 CYP72A45P1 partial seq

scaffold_236 (+) 143286-145899 CYP72A45P2 partial seq

scaffold_236 (+) 154621-158825 CYP72A46P1 partial seq

scaffold_236 (+) 160492-160917 CYP72A46P2 partial seq

scaffold_236 (+) 177460-180461 CYP72A42v2 almost complete missing C-term

scaffold_256 (+) 532-1167 CYP76G-se1[2] exon 2 only

scaffold_256 (+) 26660-27136 CYP76G-se2[1] N-term fragment

scaffold_256 (+) 32430-34839 CYP76G2 66% to 76G1

scaffold_256 (+) 67375-69789 CYP76G3 66% to 76G1

scaffold_256 (+) 78586-81678 CYP76G4 68% to 76G1

scaffold_256 (+) 98560-101256 CYP76G5 68% to 76G1

scaffold_279 (-) 99748-99595 CYP81R6-de2b pseudogene PKG to PERF region

scaffold_279 (-) 96174-94443 CYP81R6 43% to 81K1 43% to 81A6

scaffold_282 (-) 9453-7324 CYP749A15 99% (5aa diffs) to CYP749A1v1

scaffold_351 (+) 2-403 CYP736A5v2

scaffold_351 (+) 33771-34214 CYP736A-se4[1]

scaffold_351 (+) 36319-36393 CYP736A-se5[1] C-term frag.

scaffold_351 (+) 37523-38219 CYP736A7P2

scaffold_351 (+) 102433-102990 CYP736A4v2 2 aa diff to LG_VII (+) 4667173

scaffold_351 (+) 109005-109223 CYP736A-se6[1] N-term

scaffold_351 (+) 121370-121642 CYP736A10Pv2 no gene model at JGI

scaffold_397 (-) 54684-54058 CYP82C10P 100% match to scaffold_40 (-) 1533682

Scaffold_492 (-) 31117-27522 CYP94D23v2 64% to 94D2 missing N-term

scaffold_674 (-) 3785-1144 CYP721A7v2 partial duplicate of scaf_70 1518027

scaffold_710 (-) 1341-893 CYP71D38-de2b pseudogene 89% to 71D38

scaffold_710 (-) 19864-18128 CYP71D38 100% to 71D38, 50% to 726A1 euphorbia

scaffold_710 (-) 21263-20928 CYP71D38-de2c pseudogene 79% to 71D38

scaffold_724 (+) 1454-2065 CYP71D45P 2 aa diffs to 71D31P 95% to 71D29 exon 2

scaffold_724 (+) 13518-14366 CYP71D46P 97% to 71D29 exon 1

Scaffold_732 (-) 11570-10047 CYP94A10 96% to 94A9v1 68% to 94A4

scaffold_738 (-) 1-961 CYP72A48P 3aa diffs to CYP72A43

scaffold_738 (-) 21070-17525 CYP72A47 96% to CYP72A43 intact seq

scaffold_751 (-) 7968-5543 CYP87D1 45% to 87A2 new subfamily in CYP87?

scaffold_796 (+) 8760-12990 CYP706D2 49% to 706A5

scaffold_816 (-) 1920-927 CYP81S2 partial seq

scaffold_816 (-) 15204-14722 CYP81S1v2

scaffold_829 (-) 131153-128927 CYP82C9 50% to 82C4

scaffold_974 (-) 388-347 CYP716D2v3 END OF EXON 1

scaffold_974 (-) 738-406 CYP716D2v2 EXON 1

scaffold_974 (-) 5460-5371 CYP716D3-de1bv2 partial exon 1 pseudogene

scaffold_974 (-) 5654-5544 CYP716D3v2 partial exon 4 pseudogene

scaffold_994 (+) 9952-10569 CYP71B40v2 exon 2 duplicate seq.

scaffold_1047 (+) 3473-5320 CYP81B6 51% to 81D3

scaffold_1047 (+) 8471-9091 CYP81B6P

scaffold_1047 (+) 16009-16578 CYP81B3v2 no gene model at JGI

scaffold_1142 (-) 11129-8104 CYP92A23P pseudogene

scaffold_1182 (+) 2410-3939 CYP89A15v1 64% to 89A5

scaffold_1240 (-) 6280-5579 CYP71AN2v2 98% to 71AN2, 3 aa diffs, duplicate?

Scaffold_1297 (-) 11956-10436 CYP96A16v2 55% to 96A10, 1aa diff to CYP96A16v1

scaffold_1365 (-) 11307-10612 CYP74C7 C-term identical to 74C7

scaffold_1365 (-) 14922-15488 CYP74C6v2 100% to CYP74C6v1 probable duplicate

scaffold_1387 (-) 6082-5135 CYP78D3v2 1 aa diff to LG_I 3922062

scaffold_1454 (+) 1851-5548 CYP98A24 76% to 98A3

Scaffold_1479 (+) 6988-8586 CYP86C5v1 61% to CYP86C1, no introns 89% to 86C6

scaffold_1517 (-) 4845-4513 CYP71D29-se1d 97% to 71D29 N-term 100% scaf_19234

scaffold_1517 (-) 9207-8703 CYP71D36Pv2 3 aa diffs to 71D36P, duplicate seq.

scaffold_1564 (+) 2035-2163 CYP82C12P1-de2b C-term pseudogene fragment

scaffold_1564 (+) 5393-6497 CYP82C12P1

scaffold_1585 (-) 9137-7275 CYP79D6v2 only 2aa diffs to 79D6 poss. duplicate

Scaffold_1594 (-) 4660-3013 CYP83F4 97% to 83F1, 72% to 83F2, 63% to 83F5

scaffold_1594 (-) 10925-10809 CYP83F4-de2b C-terminal duplication of CYP83F4

scaffold_1691 (-) 2042-808 CYP89A15v2

scaffold_1694 (+) 5956-6849 CYP716A11P pseudogene last two exons only

scaffold_1745 (-) 1715-1245 CYP736A8v3 100% to LG_VII (+) 4834273

scaffold_1746 (+) 4438-6971 CYP721A2v2 52% to 721A1 100% to LG_II 24440445

scaffold_1769 (-) 9485-8871 CYP736A3v2

scaffold_1813 (+) 7926-8444 CYP71D29 duplicate seq 100% match

scaffold_1911 (+) 7175-8184 CYP71D25Pv2 2 aa diffs to v1

scaffold_1954 (-) 5819-5235 CYP89A21P

scaffold_1991 (+) 5336-7335 CYP729A4P 94% duplicate of CYP729A3v1?

scaffold_1994 (-) 5560-3035 CYP93B8v2 46% TO 93C1v1 soybean

scaffold_2001 (-) 7180-4247 CYP72A42v3

scaffold_2146 (+) 6463-8244 CYP715A2 59% to 715A1 duplicate sequence

scaffold_2179 (+) 3774-4172 CYP92A22P middle

scaffold_2240 (-) 487-3 CYP71D28v2 1 aa diff to CYP71D28v1

scaffold_2379 (-) 106-381 CYP72D2 exon 1 only

scaffold_2390 (-) 7318-5629 CYP78A21v2 69% to 78A7

scaffold_2410 (+) 3342-5208 CYP81S1v1 43% to 81A6

Scaffold_2425 (+) 683-2206 CYP94A9v1 67% to 94A4, 1 aa diff to CYP94A9v2

scaffold_2741 (-) 1250-743 CYP83F5-de2bv2 100% match to LG_V (-) 16414413

scaffold_2789 (+) 2508-4492 CYP82C15v2 51% to 82C4

scaffold_2810 (-) 1236-1 CYP102E1 46% to S. bicolor ESTs Bacterial cont.

scaffold_3616 (+) 3-478 CYP98A26

scaffold_3616 (+) 3009-5285 CYP98A25 74% to 98A3

scaffold_3645 (-) 4941-3651 CYP78A26P PSEUDOGENE 64% to 78A10

scaffold_3771 (-) 2060-330 CYP92A17v2 71% to 92A9

Scaffold_4331 (+) 1256-3864 CYP704A16 96% to 704A12, same seq?

scaffold_4500 (-) 2247-1907 CYP704A10-se5b6b pseudogene 1aa diff to 704A10

scaffold_4500 (-) 3903-3733 CYP71D40 100% match

Scaffold_4631 (-) 3310-1881 CYP74C6v3 79% to CYP74C8

scaffold_4672 (-) 2892-1263 CYP712A3v2 71% to 712A1

scaffold_4756 (-) 3708-3244 CYP705B4P pseudogene 1aa diff to LG_IX (+) 6358443

scaffold_5333 (-) 49-388 CYP707A12v2 100% to scaf_130

scaffold_5464 (-) 3066-2671 CYP81S14v2

scaffold_5479 (+) 1092-2785 CYP82C13P partial seq

scaffold_5606 (-) 1564-608 CYP82C9P2 2 aa diffs to scaffold_829

Scaffold_5798 (-) 1307-530 CYP704A12P identical to LG_XII 13549852

scaffold_5854 (+) 673-2263 CYP76T6 51% to 76C4

scaffold_5894 (-) 2108-2 CYP82C8P1 47% to 82C4

scaffold_6719 (-) 2305-1486 CYP728D7v2 40% to 716A2 partial

scaffold_6967 (-) 2023-1561 CYP71D36Pv3 100% to 71D36Pv2

scaffold_7045 (+) 1877-1981 CYP82C-se5[2] no gene model at JGI

scaffold_7290 (+) 1373-2155 CYP82C11P1 100% to scaffold_40 (-) 1522560

scaffold_7597 (-) 1871-37 CYP87D2v2 14 aa diffs to scaffold_751

scaffold_8029 (+) 1-257 CYP89A16P no gene model at JGI

scaffold_9149 (-) 1-618 CYP89A19P

scaffold_9254 (+) 1134-1760 CYP749A1v2 1 aa diff to CYP749A1v1

scaffold_9416 (-) 764-3 CYP71AP2v2 duplicate seq

scaffold_9456 (-) 2-691 CYP716C3 80% to scaf_202, 45% to 716A1

scaffold_9774 (+) 1-887 CYP716C2v2 54% to 716A1

scaffold_10588 (+) 2-1138 CYP81B13P

scaffold_11555 (-) 1500-306 CYP81S12v2 51% to 81D8

scaffold_11610 (-) 1395-784 CYP71D47 96% to 71D34 exon 2 only

scaffold_11900 (-) 1401-309 CYP39 vertebrate seq contamination

scaffold_12583 (+) 457-1149 CYP87D-se1[4:5:6:7] 46% to 87B3 pseudogene

scaffold_12820 (-) 312-52 CYP80C-se1[1] N-term no gene model at JGI

scaffold_13620 (-) 1352-2 CYP82C11P2 52% to 82C4 no gene model at JGI

scaffold_14645 (+) 312-730 CYP728F1-se2[3:4]v2 pseudogene 49% to 728C1

scaffold_14699 (-) 294-1 CYP72A42v4 no gene model at JGI

scaffold_15402 (+) 209-760 CYP82C7Pv2

scaffold_15445 (+) 1-348 CYP89A24P

scaffold_16034 (+) 2-547 CYP83F3-se3[2] 94% to CYP83F3v1

scaffold_16122 (-) 481-1221 CYP83F3v2 45% to 83A2 3aa diffs to CYP83F3v1

scaffold_16661 (+) 808-1197 CYP736A8v2 1aa diff to LG_VII (+) 4873686-4875265

scaffold_18069 (+) 2-552 CYP89A15v3 100% to scaf 1691 and scaf 1182

scaffold_18213 (+) 303-1138 CYP82C12P2

scaffold_18730 (+) 986-1117 CYP711A2 identical to LG_XVIII 711A2 seq.

scaffold_18933 (+) 920-1111 CYP71D29-se1c no gene model at JGI

scaffold_19234 (-) 368-1 CYP71D29-se1b no gene model at JGI

scaffold_19450 (-) 3-596 CYP736A8v4 duplicate seq.

scaffold_19769 (+) 488-1081 CYP89A20P runs off end

scaffold_20448 (+) 647-1056 CYP82C15v3

scaffold_21067 (+) 515-913 CYP98A25