122
Conifer P450s, 1 fungi (Pinus root induced)
99 Pinus
taeda
17 Pinus
pinaster
1 Pinus
radiata
3 Taxus
cuspidata
1 Taxus
chinensis
1 Picea
abies
2
Cryptomeria japonica (Japanese cedar)
$CYP51 bin
>CYP51 Pinus
taeda (pine)
BF517195.1 AW984874.1 AW626637.1 BX676845 CD021313
CF394090
AW290673 BF610290.1 BX250011.1 BX250891 CD027336
N-term 71%
to 51A2 arab. C-term 82% to 51A2 arab.
MDFIQNIYVQAGLLILATLVLAKIVSSILGFGSSKNLPPMVPAWPIVGGLMKFLKGPIVMLR
EEYPKLGNVFTIKLLIKNVTFLIGPEVSQHFFKAPESDLSQQEVYQFNVPTFGPGVVYDV
DYSVRQEQFRFFTESLR
536
CYP51
C-term
LXHDVLAXXDVLYRCIKEALRLHPPLIVLLRSNHRDFTVTAKDGKDYVIPKGHVVATSPAFANRLPHIFKNPDT
YDPDRFVPGREEDKVGGAFSYISFGGGRHGCLGEPFAYLQIKAIWTHLLRNFELELISP
FPEIDWNAMVVGVKDKVMVRYRRRPLSVD*
$CYP73 bin
>CYP73A20
AF096998.1 Pinus taeda trans-cinnamate 4-hydroxylase (TC4H) mRNA,
CF387404 CF390012 CF393821
CF397305 CF399964 CF402320 CF470644
CF477753 CF478231
CF478379 CF666477 AI812674 AI920132
CYP73A20
79% to 73A5
MEIMTVASLEKGLLAIFAVIVGAIFISKLKSKKLKLPPGPLAVP
IFGNWLQVGDDLNHRNLGDLAKKYGEIFLLKMGQRNLVVVSSPDLAKEVLHTQGVEFG
SRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFAWEDELGRA
VDDIKKRPEASTTGIVIRRRLQLVMYNIMYRMMFDRRFESEDDPLFLRLKALNGERSR
LAQSFEYNYGDFIPVLRPFLRGYLKICKEVKESRLLLFKDYFIDERKKLASTTGSKVT
GDKCAIDHIFEAEEKGEINEDNVLYIVENINVAAIETTLWSMEWGLAEIVNHPEIQQK
IRAELDAVIGRGVPLTEPDTTKLPYLQAVVKETLRLHMAIPLLVPHMNLHQAKLGGYD
IPAESKILVNAWFLANNPEWWEKPEEFIPERFLGEEKIEASGNDFRFLPFGVGRRSCP
GIILALPILALALGRLVQNFELLPPPGQSKVDVTEKGGQFSLHILNHSVVVAKPIA
>CF474252
Well-watered loblolly pine roots WW2 Pinus taeda cDNA clone
93% to
73A20 78% TO CYP73A23 80% TO BX251949 68% TO AL751089
KCGIDHIFEAEEKGEINEDNVLYIVENINVAAIETTLWSMEWGIAEIVNSPDIQQKIRAE
LDAVIGRGVPLTEPDTTKLPYLQAVVKETMRLHMAIPLLVPHMNLDHAKLCGYDIPAESK
ILVNAWFLANNPEWWDKPEEFIPERFLGDQEKIEASGNDFRFLPFGVGRRSCPGIILALP
IVALALGRLVQNFELLPPPGQSRVDVTEKRGQFSLQILNHSVVVAKPID*
>AL751089 AL751089 RS Pinus pinaster cDNA clone
RS05A03 similar to
TRANS-CINNAMATE 4-HYDROXYLASE.
71% to
73A20 68% to CF474252 65% to BX251949 64% to 73A23
2
KIRDELDAVVGPGIPMTESDIVKLPYLQAVMKESLRLHITLPFVPRLNVPQTKLGGYDIP 181
182
AGTKVLVNIWWLANNPELWDNPQDFIPERFLQEGEKIEFHGNDFRFLPFGAGRRSCPGIH 361
362
MALANVALTVGRLLQNFELLPPPGKSKVDVSDKGGQFSLPILNHTLLVAKPRLPASS*
>CYP73A23 Pinus taeda
AI812813, AA556941, AI812771, AI812842, AI919827
CF670152
BX254757 AW042602 AW495794 BE187484.1 BE643861.1
BF609655.1
BF610527.1
BG275633.1
sequence made from ESTs only
missing 160 amino acids at N-terminal
81% to 73A20 79% to 73A5
MASEVLAQGSALLEKSLIALLV
VVVGAVLVNKLRGRKLKLPPGPFALPIFGNWLQVGDDLNHRNLTDLAKKYGKIFLLKMGQ
RNLVVVSAPDLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMAV
PFFTNKVVRHYRFAWEDEISRV
VADVKSRAESSTSGIVIRKRLQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLA
QSFEYNYGDFIPILRPFLRGYLRICNEIKEKRLSLFKDYFVEERKKLNSTKTSTNTGELK
CAMDHILDAQNKGEI
NEDNVLYIVENINVAAIETTLWSMEWGIAELVNHQDIQSKVRAELDAVLGPGVQITEPDT
TRLPYLQAVVKETLRLRMAIPLLVPHXNLHDAKLGGYDIPAESKILVNAWWLANNPANWK
NPEEFRPERFFEEEKHTEANGNDFKFLPFGVGRKTCPGIILALPLLALSIGR
LVQNFHLLPPPGQSKVDVTEKGGQFSLHILNHSLIVAKPIASA*
>BX251949
Pinus pinaster
differenciating xylem adult Pinus pinaster
5 diffs to
CYP73A23 in Pinus taeda (ortholog of 73A23 from Pinus taeda)
QSKGEINEDNVLYIVENINVAAIETTLWSMEWGIAELVNHQEIQSKVRAELDAVLGPGVQ
ITEPDTTRLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLAN
NPANWKNPEEFRPERFFEEEKNTEANGNDFKFLPFGVGRRSCPGIILALPLLALSIGRLV
QNFHLLPPPGQSXVDVTEKGGQFSLHILNHSLIVAKPIASAYP
$CYP78 bin
>Pinus radiata cytochrome P450
(PRE74) mRNA, complete cds.
AF049067
AA220888 AA220889 AA220898 AA220911 BM158467.1
CYP78A4
59% to 78A7
MENRRSSGGSGWWVCVLPLFTKDGPAYFLHSSSDDVSAWRQWPL
YIALLIVAVCAVLVSWLSPGGCAWAGRHKRGRVAIPGPKGWPIIGSLMDMSVGLPHRK
LESLARLHGAKQLMSFSLGCTPAVITSDPEVARELLTSPHFANRPLKQSAQQLLFGRA
IGFAPNGGYWRLLRRIASAHLFAPRRIAAHEAGRQADVVAMLDDIQKEYHSKGVVRVR
RHLQGAALNNIMGSVFGRRFDMSHENEEVKKLREMVDEGFQLLGAFNWADHLPWLRPL
DPLRIHARCARLVPRVTTFVSNIIEQHRREEQRRESGDQCDFVDVLLSLQGEDKLDEE
DMIAVLWEMIFRGTDTTALLTEWTMAELVLHPEAQKKAQAELDAVVGHDRSVKDSDIP
KLPYIQAVVKEALRMHPPGPLLSWARLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPN
IWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKL
LHHFEWLPHAEHPVDLSEVLKLSCEMARPLHCVPVTRVPFAKFSD
$CYP98 bin
>AY064170.1 UniGene info Pinus taeda p-coumarate
3-hydroxylase mRNA, complete cds
BX251037 CF668250
BX248886 CF672102 CF663747 CF668330 AA556173 BG039994.1
BG040095.1
BG039083.1 BE187393.1 AW888136.1 BG625848.1 BQ697614
CYP98A19
74% to 98A3
MSVPEMGPFGVVVTGIVAIAIVYKLVQRWRFKLPPGPRPWPVVG
NLLQIEPVRFRCFWDWSKKYGPIMSVWFGSTLNVVVSNTELAKEVLKEHDQQLADRPR
SRSAEKFSRNGQDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVAAMVESI
FNDCGKQEGIGKPLVVKRYLSGVAFNNITRPAFGKRFVNEEGKMDPQGVEFKEIVATG
LKLGASLTMAEHIPYLRWMFPLEEGAFAKHGARRDNVTKAIMEEHTLARQTSGAKQHF
VDALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAITVEWAMAELVRNPRIQQKAQEEI
DRVVGRDRVMNETDFPHLPYLQCITKEALRLHPPTPLMLPHKATQNVKIGGYDIPKGS
NVHVNVWAIARDPAVWKDPVTFRPERFLEEDVDIKGHDYRLLPFGAGRRICPGAQLGI
NLVQSMLGHLLHHFVWAPPEGMQAEDIDLTENPGLVTFMAKPVQAIAIPRLPDHLYKR
QPLN
>Picea abies partial mRNA for
cytochrome P450-like protein, (CYP81
gene).
ACCESSION AJ438350 59% to 98A11
REAFGSGNAEEGDLANLPYLQAVMKETMRLHPPAPLLLPHEVSETGVTLGGFSVPKGARVLI
$CYP725
bin
>AY056019.1 Taxus cuspidata taxane 13-alpha-hydroxylase mRNA,
CYP725A2 48% to 718
MDALKQLEVSPSILFVTLAVMAGIILFFRSKRHSSVKLPPGNLG
FPLVGETLQFVRSLGSSTPQQFIEERMSKFGDVFKTSIIGHPTVVLCGPAGNRLVLSN
ENKLVQMSWPSSMMKLIGEDCLGGKTGEQHRIVRAALTRFLGPQALQNHFAKMSSGIQ
RHINEKWKGKDEATVLPLVKDLVFSVASRLFFGITEEHLQEQLHNLLEVILVGSFSVP
LNIPGFSYHKAIQARATLADIMTHLIEKRRNELRAGTASENQDLLSVLLTFTDERGNS
LADKEILDNFSMLLHGSYDSTNSPLTMLIKVLASHPESYEKVAQEQFGILSTKMEGEE
IAWKDLKEMKYSWQVVQETLRMYPPIFGTFRKAITDIHYNGYTIPKGWKLLWTTYSTQ
TKEEYFKDADQFKPSRFEEEGKHVTPYTYLPFGGGMRVCPGWEFAKMETLLFLHHFVK
AFSGLKAIDPNEKLSGKPLPPLPVNGLPIKLYSRS
>AY188177.1 Taxus cuspidata taxane 14b-hydroxylase mRNA,
complete cds
CYP725A3 49% to 718
MDVFYPLKSTVAKFNECFPAILFIVLSAVAGIVLPLLLFLRSKR
RSSVGLPPGKLGYPFIGESLLFLKALRSNTVEQFLDERVKNFGNVFKTSLIGHPTVVL
CGPAGNRLILANEEKLVQMSWPKSSMKLMGEKSITAKRGEGHMIIRSALQGFFSPGAL
QKYIGQMSKTIENHINEKWKGNDQVSVVALVGDLVFDISACLFFNINEKHERERLFEL
LEIIAVGVLAVPVDLPGFAYHRALQARSKLNAILSGLIEKRKMDLSSGLATSNQDLLS
VFLTFKDDRGNPCSDEEILDNFSGLLHGSYDTTVSAMACVFKLLSSNPECYEKVVQEQ
LGILSNKLEGDEITWKDVKSMKYTWQVVQETLRLYPSIFGSFRQAITDIHYNGYIIPK
GWKLLWTPYTTHPKEMYFSEPEKFLPSRFDQEGKLVAPYTFLPFGGGQRSCPGWEFSK
MEILLSVHHFVKTFSTFTPVDPAEIIARDSLCPLPSNGFSVKLFPRSYSLHTGNQVKKI
>AF545833.1 Taxus chinensis
5-alpha-taxadienol-10-beta-hydroxylase mRNA, complete
5-alpha-taxadienol-10-beta-hydroxylase"
MDSFIFLRSIGTKFGQLESSPAIISLTLAPILAIILLLLFRYNH
RSSVKLPPGKLGFPLIGETIQLLRTLRSETPQKFFDDRLKKFGPVYMTSLIGHSTVVL
CGPAGNKLALSNEDKLVEMEGPKSFMKLIGEDSIVAKRGEDHRILRTALARFLGAQAL
QNYLGRMSSEIGHHFNKKWKGKDEVKVLPLVRGLIFSIASTLFFDANDGHQQKQLHHL
LETILVGSLSVPLDFPGTRYRKGLQARLKLDEILSSLIKRRRSDLRSGIASDDQDLLS
VLLTFRDEKGNSLTDQGILDNFSAMFHASYDTTVAPMALIFKLLYSNPEYHEKVFQEQ
LEIIGNKKEGEEISWKDLKSMKYTWQAVQESLRMYPPVFGIFRKAITDIHYDGYTIPK
GWRVLCSPYTTHLREEYFPEPEKFRPSRFEDEGRHVTPYTYVPFGGGLRTCPGWEFSK
IEILLFVHHFVKNFSSYIPVDPNEKVLSDPLPPLPANGFSIKLFPRS
>AF318211 Taxus cuspidata
5-alpha-taxadienol-10-beta-hydroxylase mRNA, complete
CYP725A1 45% to 718
MDSFIFLRSIGTKFGQLESSPAILSLTLAPILAIILLLLFRYNH
RSSVKLPPGKLGFPLIGETIQLLRTLRSETPQKFFDDRLKKFGPVYMTSLIGHPTVVL
CGPAGNKLVLSNEDKLVEMEGPKSFMKLIGEDSIVAKRGEDHRILRTALARFLGAQAL
QNYLGRMSSEIGHHFNEKWKGKDEVKVLPLVRGLIFSIASTLFFDVNDGHQQKQLHHL
LETILVGSLSVPLDFPGTRYRKGLQARLKLDEILSSLIKRRRRDLRSGIASDDQDLLS
VLLTFRDEKGNSLTDQGILDNFSAMFHASYDTTVAPMALIFKLLYSNPEYHEKVFQEQ
LEIIGNKKEGEEISWKDLKSMKYTWQAVQESLRMYPPVFGIFRKAITDIHYDGYTIPK
GWRVLCSPYTTHLREEYFPEPEEFRPSRFEDEGRHVTPYTYVPFGGGLRTCPGWEFSK
IEILLFVHHFVKNFSSYIPVDPNEKVLSDPLPPLPANGFSIKLFPRS
$CYP71 bin
>CF397580 Drought-stressed loblolly pine roots DS3
Pinus taeda cDNA clone
CF393834 CF397258 CF398277 CF399002 CF399517 CF472070 CF475340 CF666506 CF668475
CF663405 CF390647 CF664544 CF472140 CF399053 CF399084 CF388981
CF395197 CF395240
94% to
CF396181 94% TO CF398971 70% CF670928 62% TO CF672363
45% to
71A1, low 40% range with other CYP71 subfams 43% to 75B1 42% to 92A1
MAFHHLCESLALPATFTVADGGPPAATVLCLLWSFFMIWFLRKRRTSATL
PPGPYAWPIIGNLHQLVLPAHRSLRGLADKYGPILFLRLGSVPTVVVSSSETAKEFLKTH
DLIFASRPPTAAGRLMFSNSKDVVFAPYGDHWRQMRKICVLELLTAKRIESFKSVREEEV
SAMISSIWEESEKGKMGVNVSKAVSTLTSNIVWRILAGRKFSDDDLGGDFQGFKG
LMTELTATVGEFNIGDFIPYLDWLDLQGIKRRMKKIHKTFDEFAEKIIDDH
VNVNHLQKEAVDAEPHVQDFVDVLLHMAKANTKITRETIKAVVLDLFGAGLDRISISLE
WAMSELLRHPRAMKKIKEEIESVVGQHWKVKESDLANMKYLHCVVKETLRLYPAAPLAIP
HESAETVTVGGYSIPKKTMLMVNVWAIGRDPKVWGADASEFKPERFMEDEHVNVTYPSNF
NMIPFGAGRRGCPGASMAIPTVQLALAQLLHTFDWRVDGDPSQLDMKEACGLTIPRKVPL
SAFPKLSSSFPI*
>CF477451 UniGene info RTWW3_7_C08.g1_A022
Well-watered loblolly pine roots WW3 Pinus
taeda
cDNA clone RTWW3_7_C08_A022 5'.
Length = 683
96% to
CF397580
30
QGFKGLMTELTATVGEFNIGDFIPYLDCLDLQGIKRRMKKIHKTFDEFAEKIIDDHVNVN 209
210
HLQKEAVDADPHVQDFVDVLLHMAKADTKITRETIKAVVLDLFGAGLDRISISLEWAM 383
384
SELLRHPRAMKKLKEEIGSVVGQHWKVKESDLANMKYLHCVVKETLRLYPAAPLAIPHES 563
564
AETVTVGGYFIPKKTMLMVNVWAIGRDPKVWGSDASEFKP 683
>CF669910 UniGene info RTCNT1_46_G07.g1_A029 Root
control Pinus taeda cDNA clone
RTCNT1_46_G07_A029 5'.
Length = 784
97% to
CF397580 96% to CF396958
3
RQMRKICVLELLTAKRIESFKSVREEEVSAMISSIWEESEKGKMGVNVSKAVSTLTSNIV 182
183
WRILAGRKFSDDDLGGDFQGFKGLMTELTATVGEFNIGDFIPYLDCLDLQGIKRRMK 353
354
KIHKTFDEFAEKIINDHVNVNHLQKEAVDADPHVQDFVDVLLHMAKADTKITRETIKA 527
528
VVLDLFGAGLDRISISLEWAMSELLRHPRAMKKLKEEIGSVVGQHWKVKESDLANMKYLH 707
708
CVVKETLRLYPAAPLAIPHES 770
>BX680860 BX680860 RS Pinus pinaster cDNA
clone RS49H02.
Length = 598
94% to
CF397580 95% to CF396181 94% to CF396958
71 GRVNIGDFIPYLDWLDLQGIKRRMKKIHKTFDEFAEKIIDDHVNVNHLQKEAVDAEPHVQ
250
251
DFVDVLLHMAKADTKMTRETIKAVVLDLFGAGLDRISISLEWAMSELLRHPRAMKKLK 424
425
EEIESVVGQHWKVRESDLASMKYLHCVVKETLRLYPAAPLAIPHESAETVTVGGYFIP 598
>CF396958
Drought-stressed loblolly pine roots DS2 Pinus taeda cDNA clone
CF470773
96% TO
CF397580
MAFHSLCASLALPATFTVADGGPPAATVLCLLWSFFMICFLRKRRTSASL
PPGPYAWPIIGNLHQLILPAHRSLRRLADKYGPILFLRLGSVPTLVVSSSETAKEFLKTH
DLIFASRPPTAAGRLMFSNSKDVVFAPYGDHWRQMRKICVLELLTAKRIESFKSVREEEV
SAMISSIWEESEKGKMGVNVSKAVATLTSNIVWRILAGRKFSDDDLGG
DFQGFKGLMTELTATVGEFNIGDFIPYLDWLDLQGIKRR
MKKIHKTFDEFAEKIIDDHVNVNHLQKDAVDAEPHVQDFVDVLLHMAKADIKITRETIKA
VVLDLFGAGLD
>AL750435 AL750435 RN Pinus pinaster cDNA
clone
Length = 581
CF669880
95% to
CF397580
QGFKGLMTELTATVGEFNIGDFIPYLDCLDLQGIKRRMKKIHKTFDEFAEKIIDDHVNVN
HLQKEAVDADPHVQDFVDVLLHMAKADTKITRETIKAVVLDLFGAGLDRISISLEWAM
SELLRHPRAMKKLKEEIESVVGQHWKVKESDLANMKYLHCVVKETLRLYPAAPLAIPHESAETVTVGG
YFIPKKTMLMVNVWAIGRDPKVWGADASEFKPERFMEDEHVNVTDPSNFNMIPFGAGRRG
CPGASMAIPTVHLALAQLLHTFDWRVDGDPFHLDMKEACGLTIPRKVPLSAFPKLSSSXP
M*
>BX677571 BX677571 RN Pinus pinaster cDNA
clone RN41D01.
Length = 515
97% to
CF396181 97% to AL750435
3
DVLLHMAKADTKITRETIKAVVLDLFGAGLDRISISLEWAMSELLRHPRAMKKLKEEI 176
177
ESVVGQHCKVMESDLANMKYLHCVVKETLRLYPAAPLAIPHESAQTVTVGGYFIPKKTML 356
357
MVNVWAIGRDPKVWGADASEFKPERFMEDEHVNVTDPSNFNMIPFGAGRRGCP 515
>CF397603
Drought-stressed loblolly pine roots DS3 Pinus taeda cDNA clone
CF391212
(4 Diffs) CF396553
96% TO
CF397580 47% to 92A9 MAY BE N-TERM OF CF396181
GFPNLRQSLAFPATLTVADGGPPAATVLCLLWSFFMIWFLRKRRTSARLPPGPYAWPVIGNLPQLIL
PAHRSLRGLADKYGPILFLRLGSVPTVVVSSSETAKEFLKTHDLIFASRPRTAAGRLMFS
NSKDVVFAPYGDHWRQMRKICVLELLTAKRIESFKSVREEEVSAMISSIWDESEKGKMGV
NVSKAVSTLTSNIVWRILAGRKFSDDDLGGDFKGFKGLMTELTATVGEFNIGDFIPYLDW
LDLQGIKRRMKKIIK
>CF396181
Drought-stressed loblolly pine roots DS2 Pinus taeda cDNA clone
CF396137 CF398971 CF398326 CF397839
94% TO
CF397580 62% to CF672363 74% TO CF670928
IGDFIPYLDWLDLQGIKRRMKKIHKTFDEFAEKIIDDHVNVNHLQKDAVDAEPHVQDFVDVLLHMAKADIK
89 ITRETIKAVVLDLFGAGLDRISISLEWAMSELLRHPRAMKKLKEEIELVVGQHCKVMESD
268
269
LANMKYLHCVVKETLRLYPAAPLAIPHESAETVTVGGYFIPKKTMLMVNVWAIGRDPKVW 448
449
GADASEFKPERFMEDEHVSLTDPSNFNMIPFGAGRRGCPGASMAIPTVQLALAQLLHTF 625
626
DWRVDGDPSQLDMEEACGLTIPRKVPLSAFPKLSSSFR
>CF399241 UniGene info RTDS3_27_C09.g1_A022
Drought-stressed loblolly pine roots DS3 Pinus
taeda
cDNA clone RTDS3_27_C09_A022 5'.
Length = 759
same as
CF396181
28
VGEFNIGDFIPYLDWLDLQGIKRRMKKIHKTFDEFAEKIIDDHVNVNHLQKDAVDAEPHV 207
208
QDFVDVLLHMAKADIKITRETIKAVVLDLFGAGLDRISISLEWAMSELLRHPRAMKKL 381
382
KEEIELVVGQHCKVMESDLANMKYLHCVVKETLRLYPAAPLAIPHESAETVTVGGYFIPK 561
562
KTMLMVNVWAIGRDPKVWGADASEF
636
QPERFMEDEHVSLTDPSNFNMIPFGAGRRGCPGASMAIPTV 758
>CF672363 UniGene info RTCNT1_63_B12.b1_A029 Root
control Pinus taeda cDNA clone
CF663367
64% TO
CF670928 63% TO CF397580 62% TO CF398971 62% TO CF396181 51% to CF397949
QETVKSIMFDILIAGMETSASTLEWTMSELLRHPHVLKKLQEEIESTVGKRGKVNGSDVR
RMKFLQCVVKETLRLHPPVPLALPHESVETASVCGYNIPKRTTVMVNVWAIGRDPNVWGV
DALDFKPERFMHELGEHDNIMDLVTGQSDFRMLPFSAGRRGCPGATMAIPMIELALAQLL
HSFDWRVDGDPSELDMTEEAGASISRQVPLFAFPKVRREGL*
>CF663285 UniGene info RTCNT1_2_A02.b1_A029 Root
control Pinus taeda cDNA clone
RTCNT1_2_A02_A029 3'.
Length = 686
2 diffs to
CF672363
3
EWTMSELLRHPHVLKKLQEEIESTVRKRGKVNGSDVRRMKFLQCVVKETLRLHPPVPLAL 182
183
PHESVETATVCGYNIPKRTTVMVNVWAIGRDPNVWGVDALDFKPERFMHELGEHDNIMDL 362
363
VTGQSDFRMLPFSAGRRGCPGATMAIPMIELALAQLLHSFDWRVDGDPSELDMTEEAGAS 542
543
ISRQVPLFAFPKVR 584
>CF399874 UniGene info RTWW1_1_B05.g1_A015
Well-watered loblolly pine roots WW1 Pinus
taeda
cDNA clone RTWW1_1_B05_A015 5'.
Length = 709
93% to
CF672363
705
ETSASTLEWTMSELLRHPHVLKKLQQEIESTVGKRGKVNGSDVGRMKFLQCVVKETLRLH 526
525
PPVPLELPHESVETASVCGYNIPKKPPVMVNVWAIGRDPNVWGVDALDFKPERFMHELGE 346
345 HDNIMDLVTGQSDFRMLPFSAGRRGCPGTTMAIPMIELALA*LLHSFDWRVDGDPSELDM
166
165
TEEVGLSVSRHFPLFAFPRVR 103
>CF670928 UniGene info RTCNT1_53_B09.g1_A029 Root
control Pinus taeda cDNA clone
CF663543 CF671055
74% to
CF396181 70% TO CF397580 72% TO CF398971 64% TO CF672363
WLDLQGLKGRMNKIHKAFDEFAEKIIDDHVGHRMAASHQKDEEPHVKDFVDVLLEKAEADSK
31
ITRETMKALVLDMFVAAVDTVSTTLEWAMSELLRHPHAMKSLQEEIECIVGKHRQVIESD 210
211
VVRMKYLHCLVKETLRLHPAGPLGIPHESVEAVTAGGYHIPKKTMVMVNVWAIGRDPSVW 390
391
GADASEFKPERFMEEEHVNLADQSDFRMIPFGAGRRGCPGVPMAIPTIELALAQLMHV 564
565
FDWTVEGDPSLLDMTELGGLIMPRQVPLCAYPGLRAGLPL*
>CF479211 UniGene info RTWW3_24_D10.g1_A022
Well-watered loblolly pine roots WW3 Pinus
taeda
cDNA clone RTWW3_24_D10_A022 5'.
Length = 681
4 diffs to
CF670928
2 MGAFNMGVFIPYLDWLDLQGLKGRMNKIHKAFDEFAEKIIDDHVGHRMAASHQKDEEPHV
181
182
KDFVDVLLEKAEADSKITRETMKALVLDMLVAAVDTLSTTLEWAMSELLRHPHAMKSL 355
356
QEEIECIVGKHRQVIESDVVRMKYLHCVVKETLRLYPAGPLGIPHESVEAVTAGGYHIPK 535
536
KTMVMVNVWAIGRDPSVWGADASEFKPERFMEXEHVNLADQSDFRMIP 679
>CF475194 UniGene info RTWW2_14_D08.g1_A021
Well-watered loblolly pine roots WW2 Pinus
taeda
cDNA clone RTWW2_14_D08_A021 5'.
Length = 776
74% to
CF670928
2
PHVMNSLQEEIECVVGKDRKVNESDVASMKYLHCVVKETLRLYPPVAIAIPHESVEAVTV 181
182
GGYYIPKKTTLIANLWAIGRDPNVWGLDASEYKPERFMKDEHVNSTDQSDFSMIPFS 352
353
AGRRGCPGAPMAIPTIELTLTQLLHIFNWRVEGDPSQLDMTEVSGASIPRQVPLFAYPTL 532
533 RVS
541
>CF389966 UniGene info RTDR2_11_E07.g1_A021
Loblolly pine roots recovering from drought
DR2
Pinus taeda cDNA clone RTDR2_11_E07_A021 5'.
Length = 718
71% to
CF670928
3
ETTAITLVWAMSELLRHPHAMKRLQEEIECRVGKHRKVKESDVVSMKYLHSVVRETLRLY 182
183
PAGPLGFPHESAEAVTVGEYHIPKKAMLIVNVWAIGRDPNVWGKDASEFKPERFMEELVG 362
363
HNDYMDVTNTQDFRMLPFGAGRRGCPGAPMAIPTIFLTLAQLVHIFNWRVEGDPSQLDMK 542
543
EAHSMSMPREIPLFAFPSLRL 605
$CYP76
like seqs. part of 71 clan
>CF667935 UniGene info RTCNT1_33_A02.g1_A029 Root
control Pinus taeda cDNA clone
CF672051
64% to
CF667376 59% to 76H6 60% to 76C4
5 DFLDMLLEYKSESGETF
56 TKKDIIPFLYDMFVAGSETSSATIEWAMAEAIRNPRIMKKAQAELDEVIGTGRRVEETDI
235
236
DRLPYLHAVVKETFRLHPPAPLLIPHRAESSCEVAGYMIPKDTQLLVNAWAIGRDPTIWD 415
416
EPTKFKPERFVESEMEYRGQNFELIPFGAGRRICPGLPLAHRMVHVVTASLLHSFNWS 589
590
LPDGITTDTMDMSERFGITLQRASPLIAIPSLRLPSHLXNDQHH*
>BX784158 BX784158 Pinus pinaster
differenciating xylem adult Pinus pinaster
cDNA
clone 130A02.
Length = 679
81% to
CF667935
2
LDEVIGKDRKFEESDIDRLPYLHALVREVFRLHPPTPLMIPHRAESSCEVAGYMIPKSTK 181
182
VLVNAWAIGRDPTIWNEPFEFKPERFMECDIEYKGQNFELIPFGAGRRICPGLPL 346
347
AHRMVHLVTASLLHSFNWSLPDGTTPGDMDMTEKFGITLQKALPLIAIPSPRLRSHLFNDRQH*
>CF667376 UniGene info RTCNT1_29_G09.g1_A029 Root
control Pinus taeda cDNA clone
64% to
CF667935
RSDEFTRTDIRGYLTDIFGAGTDTTTTTIEWAMAELIRNPKIMKRAQKELDDVIGRKRKVEESDTERLP
208
209 YLRAVVKEVFRFHPTVPLLVPHKAESRCEVGGFVIPKNSQLLVNVWAIGRDPTLWDEPTI
388
389
FMPERFMCDDKSDMEYRGQHFELIPFGAGRRMCVGLPLASRMVHLVLASLIHSFDWAPPN 568
569
GVNAEKIDMTDKFGLTLKKAVPLYAIPTPRLLSDMYY*
>CF668595 UniGene info RTCNT1_37_B03.g1_A029 Root
control Pinus taeda cDNA clone
RTCNT1_37_B03_A029 5'.
Length = 767
91% to
CF667376 47% to 76C2
25
GKCVDIGHILFQSAVNLLCNMAFGKGGFDLHSQAVEELKDTGTKLMELCGIPNIAD 192
193
FFPFLQFLDPQGISRDAKFYMGKKYAIIDKFINERLAIRGKGSDRSDDSEKDLMDVLLDM 372
373
RSDEFTLTDIRGYLTDIFAAGTDTTTTTIEWAMAELIRNPEIMKRAQNELDDVVGC 540
541
NRKVEESDTERLPYLHAVVKEVFRFHPTVPLLLPHKADSRCEVGGFVIPKNSQILVNVWA 720
721
IGRDPTLWDE 750
$CYP72
like bin
>CF672377
UniGene info RTCNT1_63_D07.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_63_D07_A029 3'.
Length = 782
57% to 72A32
311
VGMILHEALRLYPPVSGLQRQACKPMKLGRLSIPAGTHLFLPILAIHHDQSLWGNDANEF 490
491
NPARFSEGIAKAVKHPLAFMPFGFGPRVCVGQNFALLEAKVVLAMILQQFSFVTSPSYAH 670
671 APGIFLTTRPQHGAQVILHMN*
>BX252588 BX252588 Pinus pinaster differenciating xylem adult
Pinus pinaster
cDNA
clone PP066H04.
Length = 407
53% to 72A13
AAASNHQLAFLPFSSGPRVCLGQNFAVLEAKLAISIILKNFKFTFSPSYRHAPVAFVTIN
PQHGMPIIIERVHSC*
$CYP74
like bin
>BX249417 BX249417 Pinus pinaster cDNA
clone PP023G09.
BF049706
Length = 675
62% to
74A1 arab.
MALAVMVGPPPPTAMPDRSRFPVQIFPTSRAPRR
QKGAMFAIRASISEKRATQPASPPIDQDAREIPGTYGLPFIGHIRDRQDFFRNRDEFFKS
RMEKYGSTVYRVNMPPGPPLFPDPRVIMLLDAKSFPVLFDTNRVEKKDLFAGTFMPSTDF
TGGYRTLSYLDPSEEKHAQLKNFCFEVLRMNRDRWIPEFSKAAS
>BX248874
Pinus pinaster cDNA clone PP002B03.
Length = 661
54% to
74A1 arab.
2
EITIHSVPLPYGLIKKDFERIQGFFFTHGTRALNSAQKFGLTRDEANHNLIFNICFNTW 178
179
GGMTILFPAIVRLIARAGPQLHKDLAEEVRAAVRDADAGGQITMRALENMPLVQSTVY 352
353
EVMRLEPPVPYQYGRAKENFVLESHDGCFKVRKGELLGGYQPFATRDPKVFVDDPEEFKP 532
533
RRFMGEKGQDLLRYVVWSNGPXNRSPTVXHKQCAXXDFVLMIA 661
>CF479695
loblolly pine roots WW3 Pinus taeda cDNA clone
Length = 684
56% to
74A1 arab. 54% to 74A4 rice 57% to BX248874
3 GLNREEACNNLVFYISFNAFGGLRVFFTNMVKYVARAGVELHRDLAEEVRAAVEAHGG
176
177
LTGRALESMALVRSTAYEVLRIDPPVPLQYGRAKKDFFIESHDGRYAVKKGEMLCGYQ 350
351
PFATRDPEVFTRAEEFVPRRFMGEDGQKMLKHLLWSNGRETDETSADNKQCAGQRDVVVS 530
531
MAHLFLAHFFLRYDSFAIAQSSSSSSSVTFTMLTKGSS*
>AL750722 AL750722 RN Pinus pinaster cDNA
clone RN06F01 similar to ALLENE
OXIDE
SYNTHASE.
Length = 660
61% to
74A1 arab 74% to CF479695 57% to BX248874 at least 3 seqs.
2
MLAGYQPFATKDPKVFDKAEEFVPRRFIGEKGEKMLKYVLWSNGYETDETSTDNKQCAGK 181
182
DIVVLVARLFVAHLFLRYNSFSIDQSSSSVTITTLKKA 295
CYP710
like bin
BX667594 BX667594 RN Pinus pinaster cDNA
clone RN09H09.
Length = 603
42% to
710A1
5
PGFAFYKARHAVSRLAKTLAGCAHESKKMMENGEEPACLVDFWMAETVNEIKEAERTDAR 184
185
RPPHSDDIEIGGYIFDFLFGGPKFALNSPWWGAIP*WDSTPEILENVQRRNGEDSGPILL 364
365
RPISSQNKFERLEYTEMVSK 424
$CF473014
bin CYP92 like part of CYP71 clan
>CF473014
Drought-stressed loblolly pine roots DS1 Pinus taeda cDNA clone
CF471340
CF471821 CF477457(5 diffs) CF394615 AW010433 (4 diffs)
77% to
CF470703 77% TO CF398607 62% TO CF397949 61% TO BX677300
46% to
92A8 42% to 84A4
TTELGFLQRSVSESGEVYAKFATALLFVVLAAVWSFFSCGRKGRLPPGPFPLPIIGNLHM
LGKLPHRALAALSKKYGPLMSLRFGSALILVVSSPEMAREFLKTHDELFAYKCWSATSKQ
LSFNFTDIIYSPYKVYWMQMR
KLCAMEMLNSRRLDNSRFIREDEVSAMIRSIVNSDAHKDSRPVNIKQLASSLVTAIVLRM
TFGKKYSDRDSGAFSSMIKESLLLLGSFNIGEY
IPYLNWMDLQGLNRRLKKLRTTQDQLLEKVIEEHAAQNRSNMTHDLVDALLAASADKDRELQ
655
ISRDGVKGILFDILLGGLETAPTMIEWAMAEALRNPPVMKTLQDELERVVGLGRMVCESD 476
475
LPQLVYLQAMVKETLRLHPGGPFLWRCLSAESCNILGYEIPKNTGVIVNLWAIRRDPKSW 296
295
EDAETFKPERFMERVGSEVDANGNQNLGWLAFGTGRRRCPGEQLGMLALELXVAQLLHCF 116
115
NWRLPFDDMNGKNQEMEMTEKHNGFTLPKADELCAIPT
>CF389799 UniGene info RTDR2_5_D03.g1_A021
Loblolly pine roots recovering from drought DR2
Pinus
taeda cDNA clone RTDR2_5_D03_A021 5'.
Length = 725
3 diffs to
CF473014
16
SDRDSGAFSSMIKESLLLLGSFNIGEYIPYLNWMDLQGLNRRLKKLRTTQDQLLEKVIEE 195
196
HAAQNRSNMTHDLVDALLAASADKDRELQISRDGVKGILFDILLGGLETAPTMIEW 363
364
AMAEALRNPPVMKKLQDELERVVGLGRMVCESDLPQLVYLQAMVKETLRLHPGGPFLWRC 543
544
LSAESCNILGYEIPQNTGVIVNLWAIGRDPKSWEDAETFKPERFMERVGS 693
>CF397949
Drought-stressed loblolly pine roots DS3 Pinus taeda cDNA clone
73% to
BX677300 66% to CF470703 62% to CF473014 47% to 71A11
SIQDEFLEKVIEEHVAQNDPNAERDLVDVLLAASADKDMQPQ
127
ITRDNIKAILYDMLAGGTDTSSTTMEWAMSELLRNPPVLKKVQDELERVVGKGRMVRESD 306
307
LPSLPYLQAVVKETLRLHAASPLSLPHVSVEDCTVLGYEIPKNTIVLVNIWAIGRYPTSW 486
487
EDAERFMPERFMNGFSLDQKIRNFEWIPFGGGRRGCPGEELGILLIEFSLAQLLHCFDW 663
664
TLPDKMNGQELDMSE
>CF664461 UniGene info RTCNT1_9_H07.g1_A029 Root
control Pinus taeda cDNA clone
RTCNT1_9_H07_A029 5'.
Length = 702
82% to
CF397949
7
DELLEKVIEEHVAQSDPNVTRDLVDVLLAASADKDMEPQITRDNIKAILYDMLGAG 174
175
TDTSSTTIQWAMSELLRNPPLLKKVQDELERVVGMERMVLESDLPSLPYLQAVVRETLRL 354
355
YPSAPXX 369
377
LPHLSVEACNVLGYEIPKNTQVLVNLWAIGRNPTSWEDAERFVPERFMNGCSLDEKVR 550
551
NCEWIPFGAGRRVCPGEQLAMLLVQFPLAQLLHCFYWTLPDNMNGQEL 694
>CF470703
Drought-stressed loblolly pine roots DS1 Pinus taeda cDNA
CF470768 CF471612
CF667212 CF471554
low 40%
range to 71 subfams
78% to
CF398607 77% to CF473014 66% to CF397949 64% to BX677300
GSQQPCVSYSVVNLYVKLATAFVFVVLATVWSVFSRVTKGKLPAGPFPLPIIGNLHMLGK
LPHRALAALSMKHGPLMSLRLGSSLTLVVSSPEIAREFLKTHDQVFANKGPSAAAKHLSF
NFADIIFSPYRPYWAQMRKLCTLELLSSKRLDGFRFIREDEVFAMIRSIINSDAYKGCRP
LNINKTVASLATAVICRMAFSKRYSDQDSRAFNSMVKESLLLLGTFNVGDY
IPYMAWMDLQGLNRRMKKLHTTQDQLLEKVIEEHVAQNGTNTTHDLVDVLLAASTDRDREFQ
ISRDSIKGILFDMLLGGSDTAPTIIEWAMSEALINPPVMKKLQDELERVVGLDRMACESD
LPQLVYLQAMVKETLRLHPAGPLLNRRLSAESCNVLGYEFPKNTRVLVNAWAIGRNPKLW
EDAETFKPERFMGRVGSEVDANGDQNFAWLAFGAGRRTCPGRQLGTLLVQFALAQLFHCF
NWSLPLDDMNGKKQELDMSERFNGITLPKAHELLAIATPRLECIGHLK*
>CF398607
Drought-stressed loblolly pine roots DS3 Pinus taeda cDNA clone
CF398769
78% to
CF470703 77% TO CF473014 47% TO 76H3
2 MIEWAMSEALRNPAVMKKLQDELERVVGLERMVRESDLPQLVYLQAMVKETLRLHPAGPF
181
182
LNRRLTAKSCNVMGYDIPHNTCVIFNLWAIGRNPNTWEDAECFKPERFTERVGSEIDANG 361
362
DQNFGWLPFGAGRRRCPGQQLATLLVELGVAQLLHCFNWRIPLDDMNGANQELDMTERFN
GLTLPKVHELRAIPTPRLNALPTSNRTSFQ*
>BX677300 BX677300 RN Pinus pinaster cDNA clone
RN20B10.
AL750799
73% to
CF397949 64% to CF470703 61% to CF473014
52% to 75A11 52% to 71A11
3
ELQITRDNIKAVLYDMLAAGTDTSSAGIEWAMSELLRNPLVLNKLQDELQRVVGLERMVRESD 191
192
LPRLPYLQAVVRETLRLHPPGPLAIPHNSIDACKVLGYEIPRNTHVFVNIWAIGRNPKSW 371
372 EDPERFVPERFMHGDCLDDRIKNFEWMPFGAGRRRCPGELLGTLLVEFAVAQLVHCFNW
548
549
RLPDDMTGE
$CF386061
bin CYP75 like part of 71 clan
>CF386061 UniGene info RTDR1_8_D11.b1_A015
Loblolly pine Pinus taeda cDNA clone
Length = 725
CF386988
CF388779 CF387112 CF386770 (5 diffs) CF400183 CF402294 CF472528
CF665533
CF665452 CF663159 CF472625 CF400297 CF402134 CF387701 CF386892
46% to
75B1 47% to 75B3 63% to CF664732
MVSLNLNEFMLWFLSWLALFIGFRYVLRSNLKLKKRRFPPGPSGWPVVGSLPLLGKMPHVTLYNMYKKYGPI
VYLKLGTSDMVVASTPAAAKAFLKTLDINFSNRPGNAGATYIAYDSQDMVWAAYGGRWKM
ERKVCNMHMLGGKALEDWQPVRDAEMGFMLRNILSHSQRGETVNVPDLLNICAANMIGQI
ILSKRVFETEGDEANEFKDMVVELMTCAGYFNIGDFIPSLAWM
DLQGIQRGMKKLHKKW
DALIQRMIDEHQSTAKQRASKPDFLDIVMSQRDNCDGQGGRLSD
VHIKALLLNLFTAGTDTSSSVIEWTLAEVMNNPKLLKRVHEEMDAVIGRERRLKESDLANLPYF
VAVCKEGFRKHPSTPLSLPRVST
EACEVNGHYIPKNTRLMVNIWGIGRDPEVWEKPDEFNPNRFVGSKIDPRGNDFELIPFGA
GRRICAGTRMGITMVEYNLGSLIHAFDW
AVPPNQEGLNMDEAFGLALQKAVPLVAKATPRLPLHLY*
>CF388987 UniGene info RTDR2_16_B02.g1_A021
Loblolly pine roots recovering from drought
DR2 Pinus
taeda cDNA clone RTDR2_16_B02_A021 5'.
Length = 654
97% to
CF386061 97% to CF389444 97% to CF665533
30
EANEFKDMVVELMTCAGYFNIGDFIPSVAWMDLQGIQRGMKKLHKKWDALIQRMIDEHQS 209
210
TVKQRASKPDFLDIVMSQRDNCDGQGGRLSNVHIKALLLNLFTAGTDTSSSVIEW 374
375
TLAEVMNNPKLLKRVHEEMDAVIGRERRLKESDLANLPYFVAVCKEGFRKHPSTPLSLPR 554
555
VSTEACEVDGYYIPKNTRLMVNIWGIGRDPEVW 653
>CF389444
Pinus taeda cDNA clone
CF400152
CF401062 CF474754 CF475076 CF475411 CF387731
96% to
CF386061 6 diffs
51 DALIQRMIDEHQSTAKQRASKPDFLDVVMSQRDNC
25
DGQGGRLSDVHIKALLLNLFTAGTDTSSSVVEWTLAEVMNNPKLLKRVHEEMDAVIGRER 204
205
RLKESDLANLPYFVAVCKEGFRKHPSTPLSLPRVSTEACEVDGYYIPKNTRLMVNIW 375
376
GIGRDPEVWEKPEEFNPDRFVGSKIDPRGNDFELIPFGAGRRICAGTRMGITMVEYNLGS 555
556
LIHAFDWDVPPNQEGLNMDEAFGLALQKAVPLVAKVSPRLPLHLY* 579
>CF385271
Loblolly pine roots recovering from drought DR1 Pinus taeda cDNA clone
96% to
CF387112 8 diffs in N-term 50 aa 94% to CF386061
WFLSCLALYIGFRYVLRSRLKLKKRQLPPGPPGWPLVGSLPLLGAMPHVTLYNMYKKYGP
IVYLKLGTSDMVVASTPAAAKAFLKTLDINFSNRPGNAGATYIAYDSQDMVWAAYGGRWK
MERKVCNMHMLGGKALEDWQPVRDAEMGFMLRNILSHSQRGETVNVPDLLNICAANMIGQ
IILSKRVFETEGDEANEFKDMVVELMTCAGYFNIGDFIPSLAWMDLQGIQ
>CF390685
Loblolly pine roots recovering from drought DR2 Pinus taeda cDNA
CF394958 CF388973 CF477876 CF386135 CF387703 CF672937
CF479071
71% to
CF671978 76% TO CF391927 74% TO CF400021 55% TO CF667935
60% to
CF386061 57% to 75B3 58% to 75B1
GSRWRMLCKVCNVHLFAGKALDDVQPVREAEVGLMLKSILEHEKQGKAVNLGELLNVCTA
184
185
NVLGQIMLSKRVFESQGAKASEF
REMVVELMVLAGVFNIGDFVPSLAWMDLQGVQKKMKNLHNRFDQFFSRILEEHKAEA
10 RNGRGKNDFLSVLLSLRNDADGEGGKLTDTDMKAL
LLDLFTAGTDTSASTVEWAIAELIRHPKMMKRLQEEIDSVVGRDRRRLKETDIPKLPYLQAVVKETFRLHPSTP
LLLPRLAAEACEVEGYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTD
FEVIPFGAGRRVCAGVSMGIRMVQLMLASLLHSCDWSLPEGQLPENLDMAEAYGLTLQKA
VPLLAAPVARLPHHLYN*
>BX681107 BX681107 RS Pinus pinaster cDNA clone RS53F02.
Length = 554
96% to
CF390685 (6 diffs)
34
VNIGDFVPSLAWMDLQGVQKKMKNLHSRFDKFFSRILEEHKAEARNGGGKNDFLSVL 204
205
LSLRNDADGEGGKLTDTDMKALLLDLFTAGTDTSASTVEWAIAELIRHPKMLKRLQEE 378
379
MDSVVGRDRRRIKETDIPKLPYLQAVVKETFRLHPSTPLLLPRLAAEACEVEGYYIP 549
>CF391927
Loblolly pine roots recovering from drought DR3 Pinus taeda cDNA clone
93% to
CF671978 80% TO CF400021 76% TO CF390685 72% TO AJ309081.1
811
NAGTDTTSITVEWAIAELIRHPNIMKRCQEEIESAVKGEKRKVKESDLRNLPYLQAVVKET 629
628
LRLHPSVPLLVPRMAVEACEIEGYYIPKNARLVVNAWGMHRDPGVWERPLEFDPDRFI 455
454
GSSVDVRGSDFQLIPFGAGRRICAGMSMGIRMVQLMLATLLHSFDLSLPNGQTP 293
292
ETLDMAESSGLTLRKAAPLLVVPAARIPFHLY*
>CF671978 UniGene info RTCNT1_60_B07.g1_A029 Root
control Pinus taeda cDNA clone
CF475485 CF475538
93% TO
CF391927 71% TO CF390685 79% TO CF400021
59% to 75B3
WMDPQGVRTKMKKLHIRVDAFISKMI
3
NEHQTSSCNGVKADFLSILLPLRNDADSEEGKLTFDDIKGL
126
LLTMFNAGTDTSSITVEWAIAELIRHPNIMKRCQEEIESAVKGEQRKLEESDLRNLPYLQ 305
306
AVVKETLRLHPSVPLLLPRMTVEACEIEGYYVPKNARLMVNAWGMQRDPGVWERPLEFDP 485
486
DRFIGSSVDVRGSDFQIIPFGAGRRICAGMSMGIRMVQLMLATLLHSFDLSLPNGQPP 659
EALDMAESFGLTLRKAAPLLVVPAARIPIHLYK*
>CF400021
Well-watered loblolly pine roots WW1 Pinus taeda cDNA clone
89% to
CF391927 79% TO CF671978 74% TO CF390685 71% TO AJ309081
1
EWTVAELIRHPKMMRRCQEELDSAMKGEERRIKESDLQNLPYLQAVVKETLRLHPPFPLLA 183
184
PRMAAEACEIEGYYIPKNARLIVNAWGMQRDPDVWERPLDFDPDRFIGSSVDVRG 348
349
SDFQLIPFGAGRRICAGMSMGLRIIQLMLATLLQSFDL 462
CLPDGQSPEKLDMAEAFGLTIHKEVPLLAVPTARRPFHLYD*
>CF664732
Pinus taeda cDNA clone
CF387606
CF388012
53% to
75B1 62% to CF386061
LGFGQVLGLLFLALGFFYVVKQSLRKRLPPGPSGWPVIGSLPLLGNVPHHSLFQLSKQYG
PIMYLKLGTTDTVVVTSPKVAEACLKVNDLNFSNRPGNAGAKYMAYDSNDLVWAPYGSRW
RMLRKVCNVHLFAGKALDDVQPVREAEVGLMLKSILEHEKQGKAVNLGELLNVCTANVLG
QIMLSKRVFESQGAKASEFREMVVELMVLAGVFNIGDFVPSLAWMDL
>CF391258
Loblolly pine roots recovering from drought DR3 Pinus taeda cDNA clone
78% to
CF664732
MDPLFDFLQSSVARLSQVLTVILLLIGLICVVKRNRRKRFPPGPSGW
PVIGSLPLLGNMPHHSLYQLSKQYGPIMYLKLGTTDTVVVSSPKIAEACLKTNDLNFSNR
PGNSSAKYIGYDSHGLVWIPYGPRWRMMRKICNIHLFGGKALDDLQPVREEEVGMLVKSI
LEHERQGKAVNLGEVLNICTANVLGQTMLSKRM
>AJ309081.1
Pinus pinaster mRNA for
putative flavonoid 3'-hydroxylase
3 aa diffs
and a short fs from CF390685
72% to
CF671978 72% to CF391927 71% to
CF400021 58% to 75B4 51% to 76A5
AVVKETFRLHPSTPLLLPRLAAEACEVEGYYIPKNARLLVNAWG
IQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAGRRVCAGVTWESAWFSMLAS
LLHSFDWSLPEGQLPENMDMAEAYGLTLQKAVPLLAAPAARLPHHLYN*
>AW056850
ST57B04 Pine TriplEx shoot tip library Pinus taeda cDNA clone
65% to
CYP75A3 nearly identical to AJ309081.1 Pinus pinaster except lower case
79% to
CF671978
GYYIPKNARLLVNAWGIQRDPDVWERPLEFDPERFAGSAVDVRGTDFEVIPFGAGRRVCA
GVsmgirmvqlMLASLLHSFDWSLPEGQLPENLDMAEAYGLTLQKAVPLLAAP
>AW043335
ST32B07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
55%
identical to CYP75A3 53% identical to CYP98A1 75% to CF671978
DTSSITVEWAMAELTRHPKLLRRCQEELDSAVGGEQRTLKESDLQNLPYLKSVVKETLRL
HPPVPLLIPRXAPXXXXIXXYYIPKNARLXVNAWGMQRDPSVWGNSLEFNPDRFMVSSVD
VRGSDFQVIPFGAXRRTCAGMSMGIRMVELML
>CF387990
Loblolly pine roots recovering from drought DR1 Pinus taeda cDNA clone
CF672431
62% to
CF397580 63% to AL751033 46% to 92A9
LPQTLPPHLPATWRATAGYGALIFFLLYRILQLKGGRNGGRLPPGPYPWPIIGNLNQLKK
PVHHALKDLADKHGPIMFLRLGSVPTVVVSSSETAKHFLKTQDSIFASRPATAAGKYLSY
NFKGMVLSPYGDYWRQVRKLCVLELFTSKRIESFKHVRDEEVSAITRSIWEQSQNGTIAV
NVSKAILTLSSNVISRILFGRKVSDDDLGA
DGKGFKHMLLEVSATVGDVNIGDFIPYLDW
MDLQGTKRRMVEISKTYDAFAEKIIDEHLHVQAVAPSS
>CF474775 UniGene info RTWW2_7_B10.g1_A021
Well-watered loblolly pine roots WW2 Pinus
taeda
cDNA clone RTWW2_7_B10_A021 5'.
Length = 725
3 diffs to
CF387990
23 DGKGFKHMLLELSATVGDVNIGDFIPYLDWMDLQGIKRRMVEISKTYDAFAEKIIDEHLH
202
203 VQAAAPSS DGQAEAEAKAEAEHVKDFVDVLLQMTANNNHIKGDTKARRETVKSIMFDI 376
377 LIAGMETSASTLEWAMSELLRHPHVLKKLQEEIDSCVRKRGKVNGSDVGRMKFLQCVVKE
556
557
TLRLHPPVPLAIPHESVETATVCGYNIPKKTTVMVNVWAIGRDPNVWGVDALDFKP 724
$CYP97 bin
>CF395695
Drought-stressed loblolly pine roots DS2 Pinus taeda cDNA
77% to
97B3 77% to 97B4 46% to 97As
VINECLDNLIAGAKETRQEDDVEALQGRDYSKVKDASLLRFLVDMKGED
148
VDNRQLRDDLMTMLIAGHETTAAVLTWAVFMLAQNPDKLVKAQAEVDMVLAQRNPTYECI 327
328
KKLQYIRLIIAEALRLYPQPPLLIRRALRPDTLPGGYRGDKDGYPIPQGTDIFISVYNLH 507
508
RSPYFWDQPDNFEPERFLLPKDSKGIEGWAGFDPYKGQGALYPNEIISDFAFLPFGGGPR 687
688
KCVGDQFALMESTVGLAMLL 747
$CYP85
clan
>CF667047 UniGene info RTCNT1_27_H01.g1_A029 Root
control Pinus taeda cDNA clone
CF666968
51% to
716A1 67% TO GLYCIME MAX EST BG156590 47% to 728Cs in 85 clan
50% to
725A2
2 NLPGTRYNKATHAANAIRQQLNRILNERRVALEVGKASPEQDLLSFLISNVDEHGESLTDS
184
185
EILDNILDLLYAGHDTSSSTLTVLLKYLAENPQCYDEVQREQLDIAGSKEAGQLLEWEDL 364
365
QRMKYSWRVAQETLRLCPAVQGSFRKAIKDFKYEGFTIPKGWKLYWTVNATHKKS 529
530
QYFSDPEKFDPSRFEGDGPPPYTFVPFGGGPRMCPGNEFARMEILVFIHNIVKTF 694
695
KWSLVNPGEKVIVDPMPNPVNGLPIKLVPHQ*
>CYP724B5 Pinus pinaster (cluster pine, maritime pine)
GenEMBL EST AL750251 AS Pinus pinaster cDNA clone AS07D08
59% TO
724B1 RICE 44% TO 90B1 41% TO 724A1
1
LLGETLPFLKPHPSTSTGPFLHQRVQRFGRVFKSHLFGEPAIVSCDPDLNAYVLQNEDRL 180
181
FQCSYPTAIHGILGEMSMLVVVGDAHKRLRTLALSLVNAAKTNPNFLSDIEANALLITGK 360
361
WKQKQTVLFCEEARKFTFTVIVKQILSLKPDSPETSTILKDFLTFMKGLASLPLYIPGTS 540
541
YAKAVKSKSQILSTLKTLVDRRRNEGIQRGDXLDMLLXSTSLGDDE 678
>CF388492
Loblolly pine roots recovering from drought DR2 Pinus taeda cDNA clone
CF474400
CF667437
71%
to 707A1
3
FPRAMKARKHLSEILNQIIATRRANNVVNNDLLGSLMQSTDGSSQTLTDDQIADNIIGVIFA 188
189
AQDTTASVLTWIIKYLKDNPSFLEAVTAEQEAIRQSKGKENYLLTWEDTRKMPLTCRVIQ 368
369
ETLRVASILSFTFREAVADVEYKGYLIPKGWKVMPLFRNLHHSPEFFPDPQKF 527
528
DPSRFEVPQKPNTFMPFGGGAHSCPGNELAKLEMLIIIHHM 650
TTKYRWDFVGTETGIQYGPFPVPMQGLPIKVSRRFPGSQ*
>CF386955 Loblolly pine roots recovering from
drought DR1 Pinus taeda cDNA clone
56% to
88A4
YNWILFIRYDPNAIGALEREYGVLNLGVRAMAINLPGTAFNKAFKARRNVEAILQSVIDK
RRSGQEKNDDKNGDMLDSLLQVKDENGRFLTDEEIIDLLVMYLNAGHESSAHITMWTIIF
LLKHPEIYAKAKAEQENIVKRRIDRQTHMRFSELREMHYLRKVLDESLRLVNISPMVFRE
AVDDVEFNGFTIPKGWKTQVWLRNVHLDPHVYHDPLKFNPERWNSFVPKAGMFIPF
>BX681703 BX681703 RS Pinus pinaster cDNA clone RS63B12.
BX252216
BX255396
65% to
CYP85 C-term
DNFLYPDFSAFNPWRWQEKNGDSVMYFTAFGGGSRLCPGKELGLVQISMFLHHFVTRYRWEEV
201
202
GGDEILKFPRVVAPKGLRIKVSEY
>BM903010 UniGene info NXLV_077_H10_F NXLV (Nsf
Xylem Late wood Vertical) Pinus taeda cDNA 58% to 87B
32 DDYTSMKFTQCVINETLRISNLAAGFFREALEDTKVKGYVIPKGWVIFAFTTANHLDKK
208
209
FDAPLKFDPWRWQQNQDSSYDPFYIPFGAGARLCPG 316
>BX000562 BX000562 Pinus pinaster xylem Pinus pinaster
cDNA clone PPEM1.
Length = 197
68% to 90B1 77% to 724B1
63
FGGGPRLCPGSELAKVETAFFIHHLVLNFRWRAAELDHSVAYPYV 197
>BX680099 BX680099 RS Pinus pinaster cDNA clone RS39B12.
Length = 590
46% to
87A2
7
REKKSRGEVYLTWEDYKSMTFTTNVITETLRVSSIGTYLYRECIEETKINGYRVPKGWRV 186
187
IACTSPVNLDPSMHFEPLSFNPWRWEKRTCNKSDFQVFGGGLRYCVGSELARVQIAVFL 363
364
HHLVTKFRWEKALGWKEAIIRRPRIIFKNGY 456
>CF385695 UniGene info RTDR1_5_F02.g1_A015
Loblolly pine roots recovering from drought DR1
Pinus
taeda cDNA clone RTDR1_5_F02_A015 5'.
Length = 749
44% to
716A1
MIWKEAATVLHKAQHLEKPPFIFTVFIASFIGFA
AFSYLITNRRTRELRGIPPGTFGWPLIGETLEFLGCQRRGRPQDFCDRRKQKYGNVFTSS
LVGHPTVVLCSPQGNRFLFANENKLVVNSWPASVGNLFRSSLITAVGDDAKRLRRILMTF
LRPEALQKFVGRVDSMTKDHLAEYWIGKNEVRALPLLKRYTFSLACDLFATINNREEQAR
FWRHFMVFV
>CF390581
Pinus taeda cDNA clone RTDR2_20_B07_A021 3'.
Length = 623
CF390669
CF666518 CF666508 CF666450
75% to
BF609170.1 46% to 90C1 45% to 90B2
LQARDFLIKRIYASIKYRREHPEVVHNDFLGELLKEDLHSEEIIADFVLFLLFAGH
191
ETSASTMAFAIKFLTDCPQALRELKAE
HNALIKRKGSPRNQNITWDDYQSLKFTQCVINETHRLANVAPAVFREAIEDIKIEGGFVI
PKGWSVLVLMNGIHLDDKYHSSPLKFDPWRWQQILENNELYKNPSFMPFGGGLRLCPGMH
LAKLELGLFLHHFITKFRWEPLDDDKISYFPVSHLTKGFPIRLHPQEQMDD*
>BI416628.1
Pinus sylvestris
CYP85 clan
ortholog of BE049731.1
IQEREKRYGEIFRSNLFGRSRIVVSVDPEFNKHVLQHEGRQFQANYPKPLRNL 180
181
IGKFGLLFLYGDLQKKLHGAAVNLLRFERLSVDFMEDI 294
>AW011172.1
ST17E09 Pine TriplEx shoot tip library Pinus taeda cDNA clone
56%
to 87A2
85
LVCFALGMLLLELYKLVWRVDSRGYKLPPGSTGLPLIGETISFFRGINS 231
232
TDQPRRYIQEREKRYGEIFKSNLFGKISDCCVRGFKVQQTCPAARRQEFQANYPKPPPN 408
409
PNRKFWLLA
435
VHGDFQKKLHGTXVNXFKVQKL 500
>AA740068
833 PtIFG2 Pinus taeda cDNA clone 9312M 3'
AI725255
AI725351 AA739879 BQ107601 BQ696511 CF664817
90
like C-term 50% to 90A1 85 clan
24
DLLTKLLEEDSISDEIICDFILFLLFAGHETSSRAMTFAIKFLTTCPKALTQMKEE 191
HDAILKAKGGHKKLEWDDYKSMKFTQCVINETLRLGNFGPGVFRETKEDTKVKDCLI 200
201
PKGWVVFAFLTATHLDEKFHNEALTFNPWRWELDQDVSNNHLFSPFGGGARLCP 362
GSHLARLELALFLHIFITRFRWEALADEHPSYFPLPYLAKGFPMRLYNRE* 236
>AW011225.1
ST18B12 Pine TriplEx shoot tip library Pinus taeda cDNA clone
CYP90 like
different from AA740068
3 GGGARLCPGSHLARLELALFLHIFITRFRWEALADEHPSYFPLPYLAKGFPMCLYNRE 176
>BG318205.1
NXPV_011_G08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
BI202885.1
BG318334.1 BI644007.1 BI077317.1 AI725351
BQ698310 CF664899
CYP90 like
sequence
15 MADQISLLLVVFTAAVALLHLIYRWWNAQRGQKRTNNEKNPEGHLPPGSTGWPLIGETYS
194
195
YYRSMTSNRPRQFIDDREKRYDSDIFVSHLFGSQAVISSDPQFNKHVLQNEGRFFQAHYP 374
375
KALKALIGDYGLLSVHGDLQRKLHGIAVNLLRFERLKFDFMEEIQNLVHST
LDRWVDKKEIALQNECHQMVLNLMAKQLLDLSPSKETNEICELFVDYTNAVI
>BI398025.1
NXPV_113_E11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
BQ695774
CF474262 CF476257 CF663173 CF665569 CF665493
CYP90 like
12
ESIEDRRQHPEAVHSDLLTKLLKEDSFSEEIIADFILFLLFAGHETSSRSMSFAIK 179
180
FLTDCPRALEELKAEHDALLKRKGNLENQK
14 LNWDDYQSLKFTQCVIHETLRVGNFGPGVFRETKEDIKTKGGFVIPRGWTVYVFLTGTHL
193
194
DEKYHSSALKFDPWRWQPHLQDQELLKNPSFMPFGGGARLCPGMHLAKMELALFLHNFVT 373
374
KFRWEALQDDKISYFPFPRLIKGLXIRLRLRE*
>BE049731.1
NXNV_143_A08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
BG040616.1
BE582456.1 BF778196.1 BG040616.1 BG318000.1 BQ701705
CYP720
like cyp85 clan 87A2 like
MTETLTDSWLVGLLCLVLGFLLLQLYKLVWGASSRAYK
LPPGSTGWPLIGETISFFRGINSTAQPRQFIQERERRYGEIFRSNLFGRSRIVVSVDPE
FNKHVLQHEGRQFQANYPKPLRNLIGKYGLLSVHGDLQKKLHGAAVNLLX
FERLSVDFMEDIQNLLHITLXKWEAKRDIHLQEE
551
>AW056514
65% to BE049731.1 85 clan
81
MAETSVTYSWLVGFVCFVLATILLQLYRIVDSRGYNLPPGSRGWPLIGESLGFMREI 251
252
NSGSQPRRFIXDRELRYGEIFXSNLFGRSRLIVSVXXEFNKHVLQXXXRLFXANXPRPFR 431
432 N 434
>AI725152.1
1051 PtIFG2 Pinus taeda cDNA clone 9047r.
Like
CYP720
84 LLTKLLXQDSISDEITCDFILFLLFAGHXTSSKXXTXATKFLTTCPRLIDSHERI
248
>CF667480 UniGene info RTCNT1_30_C05.g1_A029 Root
control Pinus taeda cDNA clone
53% to
81D2
MATLLQRSDVLKRAQQELDVIVGRERILEESDLPKLKYLEAIVKETLRLYPAAPLLLPHV
AAAPCRVGGYYVPEGTEVLFNAWGIHRDPAVWESPLKFEPERFISSSIDVNGHDFTYIPF
GYGRRACPGIWLAMRMLLLTVGRLLQGFDWSIPEGTEGVDMNEGRALTLHRAVPLEAAIR
PRLPHYLY*
>CYP?
Cryptomeria japonica (Japanese cedar)
GenEMBL AU036755
Tsumura,Y., Suyama,Y., Yoshimura,K., Shirato,N. and Mukai,Y.
Sequence-tagged-sites (STSs) of cDNA clones in Cryptomeria japonica
and
their evaluation as molecular markers in conifers
Theor.
Appl. Genet. 94, 764-772 (1997)
This
fragment is 54% identical to 76C1, 52% identical to 98A2 and
others
The
sequence is too short to name.
53% to
CF667480
RLQLRHSPSLCSLMKPSEACKCWRIPCPEGTQLLVNIWEIHRDXAVWDRP
MEFIPERFVKSDTEIDVKGQDFELIPFGSGRRKCPGMPLAXTVISHTLGR
LLQSFEWFCPEGSEIDMTEGLGLSTPKSVPLEAIIKPRLPLHLY*
>CYP?
Cryptomeria japonica (Japanese cedar)
GenEMBL BP176293.1
76% to
AU036755
57% to
92A11 60% to CF667480
LGKAQQEIDXHVGRSRLMEESDIHKLKYLQAIVKETFRLFPAAPLLLPHVSIGA
441
ACTVGGYCVPAGTQLLVNVWAIHRDAAVWERPMEFDPERFLKSGKEIDVKGQDFELIPFG 262
261
SGRRICPGMSLGLIVVSHTLGCLLQSFECFSPEGTEIDMTEGLGLTMPKSIPLEVIIKPR 82
81 LPLHLY 64
>CF393317
Loblolly pine roots recovering from drought DR3 Pinus taeda cDNA clone
63% to
CF397949
12
LKAILLDMLHAGSDAPSTALEWAMSELLRRPSAMKKAQEELEKVVGLNRKVRETDLPNLF 191
192
YLQAVVKETLRLYPSAPLLAPHESMEPCTVCGYEIPAGTRVIVNAWAIGRDPKSWEDAEE 371
372
FKPERFTESPNSCVDVRGQDFQLIPFGSGRRGCPGMQL
GMVIVEFLLAQLLHCFDW
RLPDGMEGRDLDMNEIFGLAIPRAVPLLAIPTPRLPAQVFGSRY*
>CF673059
Root control Pinus taeda cDNA clone
67% to
92A9
DDPQLNLFRVKVKAFTQDIIAGGTESSATLVEWAMAELLKKPETLEKAAEELDRVVGRER
WVEEKDIGGLEYLQAIVKEMMRLHPVAPMLVPRLSTEACKVGGYDIPANTRLHVNVWTIA
RDSGFWENPDEFRPERFQGSALDVKGRDYQLLPFGTGRRMCPGYNLGLKVVHLGLANLIH
GFHWCLPDGQSPKDLDMGETFGLSTPKTQPLVALARPRLPSHLYASEQQT*
>CF402148 UniGene info RTWW1_20_B09.g1_A015
Well-watered loblolly pine roots WW1 Pinus
taeda
cDNA clone RTWW1_20_B09_A015 5'.
Length = 795
78% to
CF673059
15
EDLDRVVGRERWVEEKDIPGLKYIQWIGKETMRLHPVAPMLVPHLSTQPCRIAGYDIPAN 194
195
TRLFVNVWTIGRDGKLWENPDEFQPERFKGSTLDVKGRDYELLPFGSGRRMCPGY 359
360 SHGLKVVYMALSNLIHGFQWKLPDGQNPEELDMCETFGLSTPRTIPLVAMARPRLPSHLY
539
>BM493207
Root-induced cDNA library from Laccaria
bicolor (Fungi) cDNA.
67% to
White rot CYP51
MPLSDHWSGYLAHAQANLPPLNSRFALIAVLNFPLFVIILNALAQL
IPRRASEPPVVFHWLPIIGSAISYGNDPLNFFFKCQKKYGDVFTFILFGRRVTVALGPRG
NNFILGGKSTVLNAEDAYTHLTTPIFGKDVVYDVPNEVFMEQKKFVKVGLSTDNLRAYVG
MIEEEVEEFMRNDAAFKVFQPNDINEWGTFDVVNVMQEITILTASRTLQGKEVRESLDKE
FAHLYNDLDGGFTPLNFL
@@@@@@@@@@@@
N-terminals
>CF475447
Well-watered loblolly pine roots WW2 Pinus taeda cDNA clone
CF474434
CF672718 AW064998 CF479001
47% to
71A25
MVNELGSEKPFLVCL
560
EFYMKLAIALVALVVAWSFFVKGRNRKLPPGPFPLPIIGNLHLLGQLPHQALAALSLK 387
386
FGPLMSLRLGSALTLVVSSPDMAKEFLKTHDLLFASRPPSAATNYFWYNCTDIGFAPYGA 207
206
YWRQMRKVCVLQLLSSRRLDYFRFIREEEVSAMIHSIAHSDHPVNISKIVSTLMT 42
41
DIICRMTLGRKYSDEDSIGGKGINSVVRESYVVAGAFNVGDYIPYXGLDGSTRSQ
QTLQGNTWHPRRVARESN
>CF388753
Loblolly pine roots recovering from drought DR2 Pinus taeda cDNA
48% to
71A25
1
SAWPVHECPYFYFKLATVILLAVATAWGFLFRGRKQKLPPGPFQWPIVGNLHMMGELPHQAIT 189
190 ALSMKYGPLMSLRLGSYLTLVVSSADVAEEFLKIHDLAFSSRPPTIGTKYLWYNSSDVTF
369
370
SPYGPYWRQMRKICVLQLLSSRRIDSFRHIREEEVSAMIRYIANSDLRPANISRAV 537
538
SALGIDIICRMAFGKKYCDQDLIGGIGINSMIKETFVLAGSLNMG 672
>BX249800 BX249800 Pinus pinaster
differenciating xylem adult cDNA clone PP027H05.
69% to
CF475447 70% to CF474434 65% to CF388753 61% to CF470703 59% to CF473014
47% to
71A21 52% to 71Y5
25
YSERLMLECDEFYIKFAAAILVTLVVSWSFLFQVRKRRLPPGPFPLPIVGNLHLLLGHL 201
202
PHQALATLSLKCGPLMSLRLGSSALTLVVSSADMAKEFLKNNDRLFAGRPQSMAAKYLSY 381
382
NFSNVGYAPYGAYWRQMRKICVLQLLSSKRLDSFRFIREEEVCCMIRSIIEDSEGSHGP 558
559 VSI
567
>CF388617
Loblolly pine roots recovering from drought DR2 Pinus taeda cDNA clone
71% to
CF470703 67% to CF473014 61% to CF474434
LGSALTLVVSSPDMASEFLKTHDQLFANKWQSAAAKHLTYNFSDFAFAPFGPYWRQMRKL
CASELLSSRRVDYFRFIREEEVSAMTRSILNSEDSRPLNIRKAVASLATAITCRMAFGKK
NSDTDLKGFNSMVRESLLLLGSFNIGDYLPYLGWMDLQGVNRRMKKLHKTQDQLLEKVID
EHVTLDEPKITHDFVDVLLAASADKDREFQISRDSVKGVLYDVLLGG
>AW043075
Pine TriplEx shoot tip library Pinus taeda cDNA clone
69% to
CF474434 66% to CF475447 45% to 71A25 55% to 71D16
24
ELGYEMRPVWESAGFYIEALVALVAAWGFFIFIYRNKRRLPSGPVQLPIIGNLHL 188
189
LGKLPHQALSALSLKYGPFMSLRLGSSTLMLVISSGDMAEEFLKTHDQCFASRAPSTAAK 368
369
CLTYNCSGIVFAPYGPYWRQMRKVCVLQLLSSKRIDSFKXTREXGVSXMILXIINQTQXI 548
549
LKDDPPPLNVRK 584
>AL751033 AL751033 RS Pinus pinaster cDNA
similar to FLAVONOID 3',5'-HYDROXYLASE.
75% to
CF397580 48% to 92A9
LPPGPFPWPIIGNLHQLVQPAHRSLKALADKYGPIFSLRLGSVPAIVVSSSEMAKLFLKT
HDLVFSSRPLTSSGKYIFFNYQDVIFAQYGDHWRQMRKICVLELLTAKRIESFRPVREEE
LSVVIRSIWEESESGIKSVNVSKAIATLNTNIIWRVLAGRKFSDDDLGSDFESFKDFMVE
LISTVGAXNIGDFIPRLDWLDLQGIKG
>CF392508
Loblolly pine roots recovering from drought DR3 Pinus taeda cDNA clone
CF392160
(3 DIFFS) BQ697969 BI202826 BQ698279
46% TO
92A8 68% TO CF397580
MSFDKLLQALPLPLPAILIATFIFFFSCWILHQSRRNERLPPGPYPWPISGNFHQVRLPLHRALKNLA
EKYGPILFLRFGSVPTVVVSSSEMAKHFLKTHDLIFASRPLTSVGKYFFYNFKDIAFSPY
GDHWRKMRKICVLELLTGKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSL
ANILWRILARKKFSDNDLGADG
>CF670174
Pinus taeda cDNA clone
55% to 92A9
MDLQRVFTTGDMRILGYLTVAVVSAYFICRRLGPSLKLPPGPRGWPIIGHLHLMGKL
PHRSLDRLCKTYGPLMYMRLGSVPCVVASTAEMAQQFLKTNDVIFASRPRVAAGKYTVYN
YSDITGSPYGENWRLGRKLCLMELFSAKRLESFEYIRVEEVGRMIRSVFETCQRGLPVEI
REETTNVSNNIISRMVLGRRYLD
>CF387732
Loblolly pine roots recovering from drought DR1 Pinus taeda cDNA clone
80% to
CF670174 58% to 92A9
36
MDLQLSFAIADLRMIGYLVVTIISAYLICRRLRPSVKLPPGPRAWPIIGNLNLMGKL 206
207
PHRSLDRLSKTYGPLMYMRLGSMPCVVGSSAEMAREFLKTHDLTFSSRPRVAAGKYTVYN 386
387
YSDITWSPYGEHWRLARKICLMELFSAKRLESFEYIRVEEVARMLSSVFETSRQGLPV 560
561
EIREETTNVSNNIISRMVLG 620
>CF398854
Drought-stressed loblolly pine roots DS3 Pinus taeda cDNA clone
74% to
CF473014
12
ENSEFYVKLIAALLLVVLLAAWRFLSRGTNSNLPPGPFPLPIIGNLHMLGKLPHRALAAL 191
192
SVEHGPLMSLRLGSALTLVVSSAEMAREFLK 284
>CF472421
loblolly pine roots DS1 Pinus taeda cDNA clone
45% to
75B6
MYPVEAATECYLLVGSLLVFVLLLSIRKKKKNRLPPGPPGWPIIGNLLQLGDRPHE
SLYRLAQKYGDLMSLKLGNKLTLVVSSPSMAKEVLKTNDQTFSSRSVTIAAKTFAYQGKT
LVFVHYGPQWRFLRKICTTELFSPKRLDALQHLRKEEVNRTIESIFEDSKKRQSVNIGAS
AFVTSLSLVARMVCGK
GTANLSDVFP
>BQ697235
Pinus taeda cDNA clone
BI643955
53% to
CF474434 some frameshifts and a deletion of about 25 aa
GWVFFFRATKLRLPPGPLPLPIIGNLHQLGELPHRTLAALSHNYGPLMSLRLGSALTLVV
SSPDVAKEFLTTHDRVFGVRPRSXXXXXXXXXXXXXXXXXXXXXXXXXRRLCVYSCWASRSIESFSCIREEEVSAMVCSIANSD
CPVSVGKTVSAVTNNMICRMAFGRKYCDQHLIDS
>CF671256
Pinus taeda cDNA clone
poor match
to other plant P450s
WYSVLGITSAIVFLVLDLWRRTYGRLPPGPLGWPIVGNLLQLGNKPNESLFHLATKYGPL
MCVSLGMKTTVVVSSPAMAKEVLTTHDRVLAGRTVIQSVKYASYDKTSVGWAQCGPYWRM
LRRISNTELFSVKRLENLQHLRRDQVLRTIHQILQEGIKGNSINIEDTMVHCVVNLLGNM
AFGKDMFDSHSPAFPEFKDSISEMMANATAPNLADYFPP
>CF477547
loblolly pine roots WW3 Pinus taeda cDNA clone
57% to
CF671256
STVITFLLFDVWRRKAYYRLPPGPAGWPIVGNLPQVGNKPHESFFHLANKYGPIISLSLG
MKTTVVVSSSAMAKEVLKTHDHILSGRILTQAGKALSHYKTSIVFGQYGSHWRMLRRVSI
NELFSAKRLEALLHLRRDQVNRMIHQIFEDAVKGKCVDIGQTAFQSSFNLLGKMVFGKDV
LDPQLGTQELKYALSKVMVLYATPNVADFFPCLQFLDPQSVYRNTNFYF
>BI398019
Pinus taeda cDNA clone
83% to
CF392508
FDKLLHALPLPLPAILIATFIFFFSCWTLHHSLRNDRLPPGPYPWPITCNFHQVRLPLHR
ALKNLAEKYGPILFLRFGSXXTVVVSSSEMAKHFPKTHDLXFASRPSNIVY
KYFFYNFK
DIAFSPYGHHWRKMIHXXXLELLTGKRFQSLNHVLQEELSSMIHSIX
>BQ702358
Pinus taeda cDNA clone
72% to
CF477547
LDMLGRKTYYRLPPGPPGWPIVGNLFQLGKNPSESFFHLAQKYGPLMSLSLGMKIAVVVS
SPAMAKEVLKTHDHILAGRIVNQVARSLSQHKSSFVLCQYGSRWRMLRRISNTELFSVKR
LEALQYLRRDQVNGMIHQIFEEXVKGXQC
@@@@@@@@@@@@@
from old
searches on Pinus page
>AI812861
20H12 Pinus taeda cDNA, mRNA sequence
53% to
77A1 N-term
probable
N-terminal of a CYP77 from pine
MAILSFLQAVLLLVISLVFLRLVLWKIWRYRNLPPGP
PAWPILGNLLQMGFASGAFERSVQKFHERYGPIFTMWLGSRPLLMIASQE
LAHEALIQKGSLFSDRPPA
>AW043205
ST30E11 Pine TriplEx shoot tip library Pinus taeda cDNA clone
61% to
CYP77A1
LFLKSRPPKKHLPPGPRGWPLVGNLFQVVFSGKPFIYVIRDLREKFSPIFTLKMGQKTMI
IITCPKVAHEALIENGALFASRPPDTPTKMFFSENKCSVNSSLYGSVWRXLRRNMVSELL
NPSRMK
>AI813004
2F2 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA
AI920165
704 like 58% to 704A2 86 clan
GRMSYXWWDDAKEFKPERWIQD
10
GIFHPKSPFKXPAFQAGPRTCLGKDFAYLQMKIVAAVLVRXFKFEAVKTKEVRYRTMLTL 189
190
HMNEDGLNVQVTPR 231
>AI813156
23F12 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA
complete
translation 55% to 78A6 52% to 78A4
AFCNTWFLLVLLIAMAYVLLSWLSPGGPAWGGSLKRKPTIPGPMGLPILG
NLTVMCSLAHQRLAYLAQACNAQKLMAFSMGFTRAVICSQPEVAKAILNS
SAFADRPIKESAYQLMFDTAIGFAPYSEYWKNLMRIAALHLFSVPRISGL
RI
>AI919813
1357 Pine Lambda Zap Xylem library Pinus taeda cDNA clone
53%
identical to CYP84
540
IGRNPKSWEDXESSKPREVSWKKXGXAELDVNVQNFEWIPFGAGRRGCPGQQLGMLVVEX 361
360
GMAQLLHCFNWRLPEKMNGQEELDMSERFNGLTLPRAHELVAVPTPRLSVH 208
>AW010774
ST12C06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
52% to
86C1
IALSWLFWLLIQHPAVEENILSELRQILVSRRGSNPGGFTVEEVRQMQYLHAALSETLRL
YPSLPINYKEVIEDEVLPDGARLKRGTNLIFPIYSMGRTXXIWGEDCREFKPERWLKEGV
FVAEGGYKYPVFSAXPRVCLGKDFAFFVHEMG
>AA220912
27 Pinus radiata somatic embryogenic library Pinus radiata cDNA
like
extreme C-term of 78A4
64 VXXXXVLKLSXEXVXLFHXVSGTRXPFGKFXD 159
>AW225716.1
ST71A02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
BG625777.1
BG832634.1
65% to
AI725152.1 50% to 90B1
7
KAREFLIKKIYESIEDRRQHPEAVHNDLLTKLLKEDSFSEEIIADFILFLLFAGHET 177
178
SSRXMSFAIKFLTDCPRALEELKAEHDALLKRKGNLKNQKLNWDDYQSLKFTQCVIH
ETLRVGNFGPGVFRETKED
>AW754540.1
PC03D04 Pine TriplEx pollen cone library Pinus taeda cDNA clone
59% to
CF672363 81% to 703A2
59 PFSAGKRKCPGAPLGTCFVLLALARLFHSFHW 154
>AW870094.1
NXNV_124_A07_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
60% to
76C2 60% to CF667935
8
PTLLKKAQAELDEVVGREKRMEESDIAKLPYLQAVVKEVLRLHPAAPLIIPRRADNSAEI 187
188
GGYVVPENTQVFVNIWGIVRDPNVWKEPLKFKPERFLXCKTDYRXXDFELIPFGAXXXIC 367
>BF609170.1
NXSI_041_B05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
CYP90 like
91% to BI398025.1
4
EDVKTKGGFVIPKGWTVYVFLTGTHLDEKYHSSALTFNPWRWQQLLQDQELSKNPSFMPF 183
184
GGGARLCPGMHLAKLELALFLHNFVTKFR 270
>BF610049.1
NXSI_054_B07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
83% to
85A1
7 FTAFGGGSRLCPGKELGLVQISMFLHHFVTRYR
105
>BM158852.1
NXLV_040_D06_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
57% to
98A3 63% to CF397949
23 PFGAGTKVCPGEQLAMLLVQFPLAXLLHCFYWT 121
>BM428379.1
NXRV_015_D05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
BQ655449
BQ698991 CD024826
63% to
85A2
MDILSTIALGFIFLCSIIALLRWNEVRYGKKGLPPGTMGWPLFGETPDFLRY 172
173
GQQFIKNRKARYGDLFKTHILGCPTVISTDPALNRYILLNXXRGLIPGXXQSML 334
335
DILGKWTIAAVQXDLHKTMXXALL 391
###########
CYP85 search new hits
>BX681447 BX681447 RS Pinus pinaster cDNA clone RS59D11.
CF671620
Length = 546
57% to
76C1 57% to 75B3
RTVWPKETVNGSDGPK
61
DLLDVLLDMRSDEFSLIDIRGYLTDLFGAGSETTSKTMEWAMAELICNPEKMKRAQAE 234
235
LDEVVGRNRRVEESDTHRLPYLCAVVKEVFRLHPVVPLLLPHRAASACEIGGYLIPK 405
406
DTQILVNVWAIARDPAIWNEPLKFMPERFMDTKMSKLDFKGQHFELL
PFGAGRRICVGLPLASQIIHLVLASLLHYFDWAPPNGMSA
>CF401592 UniGene info RTWW1_13_D10.g1_A015
Well-watered loblolly pine roots WW1 Pinus
taeda
cDNA clone RTWW1_13_D10_A015 5'.
Length = 748
69% to
Sorghum bicolor BE355748
EMRDRRDVYLTALNKGLDERIANGTYKPCIQANVILDKEAKLNSEELTSISLTMLSGGLD
TITTLVAWSVAMLAQRPDIQATALKAIQETYGTDQPLCDALDDQHCQYIVALVRECLRFY
TVLRLALPRASVKDITYQGIVIPKGTVVFLNAWACNMDPNVWQDPEIFRPERWLEHEDAP
MFTYGMGYRMCAGSLLANRELYLTFIRLLNSFRIEXVDDVDVHPVRGNLDPTSLVAMPKR
YRARFVPR
>BE355748
Sorghum bicolor cDNA.
Length = 653
69% to
CF401592
AYDDQKCGYVVALVRECLRYYTVLRLALPRATVKDVIYDGKLIPAGSTIYLNAWACNMDP
EVWSDPDEFRPERWLEQPDAPLHSYGLGYRMCAGSLLANRELYLVFLRMLNSFELVPDSD
VDVHPVRGSSDPTSLVTMCRAYKVVFKPRNQGILREALKAADERLAEHEKS*
>CF672901 UniGene info RTCNT1_74_E09.g1_A029 Root
control Pinus taeda cDNA clone
RTCNT1_74_E09_A029 5'.
Length = 758
55% to
89A5
RRRQRDTMLSLIHGSRSAAGGGYVDSLFTLTVDNGRRLEDDDLVSLCSEFIHAGTDTTAT
CLQWLMANLVIRPDVQARLYDEIVGVVGKGRPVESADVQHMPFLHAVVKESLRCHPPGHF
VMPHAVSQPCQLGGYDIPTEAWVNFFVTAIATDPGAWEKPLEFRPERFADEGAEADLTGT
KEIKMMPFSAGRRICPGIELGLLHMHLVVARLVQEFKWECKAGETVDLSELQELTMVLKH
PLPAIIKERARD
>CF478844
Pinus taeda cDNA clone RTWW3_15_B06_A022 5'.
Length = 701
92% to
BG318205.1
IYRWWNAQTGQRKTHTEKNQAVH
71
LPPGSTGWPLIGETYSYYRSMTSNRPRQFIDDREKRYDSDIFVSHLFGSQTVVSADPQFN 250
251
KYVLQNEGRLFQAQYPKALKALMGDYGLLSVHGDLQRKLHGIAVNLLSFERLKFDFMVEI 430
431
QNLVHSTLDRWVDEKEIFLQNECHQMVLNLMAKQLLDLSPSKETNEICELFVDYNNAMIA 610
611
IPIKIPGSTYAKGLKARKVLIRKIFNIIKE 700
>CF664384 UniGene info RTCNT1_9_A08.g1_A029 Root
control Pinus taeda cDNA clone
RTCNT1_9_A08_A029 5'.
Length = 756
51% to
707A5
VSCCKLAVERFTAESLCEFVSLSAEIVAFYIRINVSFFFCSQLMVVVVCAG
RYGDIFKTHMLGCPCIMMASPEAAKFVLTSHAHLFKPTFPASKERLLGPQALFFHQGDYHARLRKLXXXXXX
LPGKIRSIVAHIESIALHALDSWEDSTVNTFQEMKRYSFEVGLFSIFRNQYHEILEKEELKQSYYT
564
565
LERGYNSMPLNLPGTPFQQAMKARKRLSKILSKLIAERRSSTEWKEGLLETMISSEDER 741
>CF671084 UniGene info RTCNT1_54_D03.g1_A029 Root
control Pinus taeda cDNA clone
CF671014
80% to
CF390581
QHPDEAVHYDFLGELLKEDLHSEEVIADLVLFLLFAGHETSASAMVFSIKFLTDCPRALH
ELKEEHGALLKRKGSPRNQKLTWDDYRSMKFTECVIYETLRLANVASAIYREAKEDIKIK
GGFVIPRGWTVMVLLNSMHLDEKYHSSALTFDPWRWQRQLENNELSKNPSFIPFGGGARL
CPGMHLAKLELALFLHNFVTKFRWEALEEDKISYFPVSHLTKGFPIRLHHFQERMDD*
>CF670819 UniGene info RTCNT1_52_F07.g1_A029 Root
control Pinus taeda cDNA clone
CF670745
59% to
89C2 64% to CF672901
APPPAGGAYVDTLFNLRVDGGRSLNDDELVTVSFEFITGGTDTTTTSLQWLMANLVIRQD
IQTRLYDEIAGVTGKGKVAEEKDLQRMPYLDAVVKETLRRHPAAHFVLSHAVTRPCELAG
YKVPADASINFYVAGIGMDPAVWPSPSEFKPERFVDEGVEVDLTGTKEIKMMPFGAGRRV
CPGLGMAMLHLNIIVARLVQEFTWECKPGETVDLSETQEFTTVMKYPLQAVIKKRERIHN*
>CF667474 UniGene info RTCNT1_30_B10.g1_A029 Root
control Pinus taeda cDNA clone
VVAMAVWYLLVQYQQPKQSHNVPRETLPPGSVGWPFLGEIISFYFRTPDFVKQRRGRYGN
LFRTVLIGYPTVISTDPEVNKFILNNDGRLFVPAYPSYWSQIIGECNIFVARGDFHKRMR
GAFLHFISISVVKNRLLSEIQNIITFSLAGWEGRNVNVLHEAEEMIFSVMANHMLSLSAG
TALESMKRDFLVMMKGLRSLPLRVPGTTFYKSLQKKQVLFNQIKSIIEERKLNMSAYDSY
DDLLSSILKSASEKEFTTTQIVDLIVQSVIGSLET
>CF385604 UniGene info RTDR1_5_F02.b1_A015
Loblolly pine roots recovering from drought DR1
Pinus
taeda cDNA clone RTDR1_5_F02_A015 3'.
Length = 519
80% to
CF667047
4
FVPFGGGPRICPGNEFARMEILVFLYNIVKNFRWNLVNPCEQVIMDPMPSPVDGLPIKL 180
>CF395628 loblolly pine roots DS2 Pinus taeda
cDNA.
Length = 774
different from other pine P450s 50% to 548A1
Neurospora (fungal contaminant)
732
EQMQKRIQAEEEAKNSGKKLRKDFVHYLLESRDPKTGVGYTKLELEADSILLI 574
573 AAGSDTVSTAIAAALFYLLRNPRTLEKATAEVRRIFSDASQIHSGSDLNRCVYLQA
406
405
AIDETLRYSPPAASSLPREVMRGGINVDGHHIPAGIVVGVSSYAIHHNEDYFPRSWEFWP 226
225
ERWLPSQESGVSEASVKLAHRAACPFSIGSRGCLGRGVAYMEVKLTLANMLFRFD 61