87 contigs assembled from Ciona intestinalis genomic DNA sequence.
24 additional Ciona savignyi sequences are included, since these are used against Ciona 
intestinalis sequences to help assemble the genes.  
793 accession numbers sorted by PROTEIN sequence from the JGI Ciona blast server.
79 P450s are assembled from the I-helix to the end of the gene.
One seq (seq 91) is a pseudogene that breaks in the middle of an exon,
has an extra aa in the heme signature and no upstream P450 sequence.
66 completed genes are 53 intestinalis P450s seq 2, 4, 7, 14, 15, 17, 18, 21, 23, 25, 
26, 27, 34, 36, 41, 42, 46, 49, 51, 53, 57, 64, 65, 66, 96, 103, 109, 110, 115, 118, 
119, 129, 125, 134, 136, 147, 148, 155, 158, 162, 164, 166, 167, 169, 180, 184, 186, 192, 198, 204, 208, 209, 228
and 13 savignyi orthologs to seq 2 (2 genes), 26, 41 (2 genes) and 110 (2 genes), 115, 
134, 166, 167, 192, 204
there are gene clusters
Nov. 6, 2002 D. Nelson

The email for the Ciona EST blast server is chikako@develop.zool.kyoto-u.ac.jp

>sequence 1, 50 
The N-term is represented twice and is different from seq 2 or 4 or 27
ILTLICLLLFYTWYRRPSRFPPGPRGFPIVGVLPFLEKYSERTMHKWSKKYGPVMSVRMGNEDWVVMGNYE
GCiWno533_e09.b1 -
DEV31420.x1
MIELVLPDLSIAPTILTLICLLLFYTWYRRPSRFPPGPRGFPIVGVL
PFLEKYSERTMHKWSKKYGPVMSVRMGNEDWVVMGNYEA

>GCiWno533_e09.b1
TTCCTGTTGGGTTAAAATCTCTCATAACAAGTCCTTTGCACTCAGTTATTTCATTCGCCAATTTCATGTACGGACGGCCC
GAGAATGCACTGCCTGCCTTCACAAAGCTCTAAAAGTGAGATTCAATCATTACAAGACTATATGATGTAAGACTGTAGTG
TTTTATAATACTTCTTTATTCTTTAGGTATGCTTGGAGTTTATGAAATTCTTATTGTTGTTGCGTGTTATAAAACGATTG
CAGTTTACACATCTAGTGTGGTGGGAGACCCTCTTAGCACATAATATCCAAATATCTTAATTGTGTTTTAAACAATTAGA
GTCTTCAGAATACGGTTTTATAATTCTTTGAAATCATTTGTTTACCACCAAGTGCGTCAAGAAAAAAAATAAAACGGTGT
CCCATCTCCCCCACCCTACTACATTACCTGATAAACAGCTTCGTAGTTTCCCATGACAACCCAGTCCTCATTTCCCATTC
TCACCGACATCACCGGACCATATTTCTTGCTCCATTTGTGCATCGTTCGCTCTGAGTATTTTTCAAGGAACGGCAAAACT
CCGACGATTGGGAAACCGCGAGGTCCAGGTGGAAATCGAGAGGGTCTTCGATACCAAGTATAAAACAATAATAAGCAAAT
GAGCGTTAGTATTGTCGGNGCAATACTCAAATCGGGTAACACGAGTTCTATCATTCTGACACGTTGAGCACAGCACTAAA
ACTGCTGCTTTGTATAGCGAACCTGGAACGTTATGCCCGCTTTAGTTTTTGCTGCGCGAAAACGCTTTCTCTTGCGAAGG
AAATTGCGCTGTGCAACCCTACGAGCTATAAATCATGTATGGTCTTAAAACGTTGTGAAGACAATCTG

>GCiWno533_e09.b1_4 this = N-term of seq 1
RLSSQRFKTIHDL*LVGLHSAISFARESVFAQQKLKRA*RSRFAIQSSSFSAVLNVSE**
NSCYPI*VLXRQY*RSFAYYCFILGIEDPLDFHLDLAVSQSSEFCRSLKNTQSERCTNGA
RNMVR*CR*EWEMRTGLSWETTKLFIR*CSRVGEMGHRFIFFLDALGGKQMISKNYKTVF
*RL*LFKTQLRYLDIMC*EGLPPH*MCKLQSFYNTQQQ*EFHKLQAYLKNKEVL*NTTVL
HHIVL**LNLTFRAL*RQAVHSRAVRT*NWRMK*LSAKDLL*EILTQQE
>GCiWno533_e09.b1_5
QIVFTTF*DHT*FIARRVAQRNFLRKRKRFRAAKTKAGITFQVRYTKQQF*CCAQRVR MI
ELVLPDLSIAPTILTLICLLLFYTWYRRPSRFPPGPRGFPIVGVLPFLEKYSERTMHKWS
KKYGPVMSVRMGNEDWVVMGNYEA VYQVM**GGGDGTPFYFFS*RTWW*TNDFKEL*NRI
LKTLIV*NTIKIFGYYVLRGSPTTLDV*TAIVL*HATTIRIS*TPSIPKE*RSIIKHYSL
TSYSLVMIESHF*SFVKAGSAFSGRPYMKLANEITECKGLVMRDFNPTGX
>GCiWno533_e09.b1_6
DCLHNVLRPYMIYSS*GCTAQFPSQEKAFSRSKN*SGHNVPGSLYKAAVLVLCSTCQNDR
TRVTRFEYCXDNTNAHLLIIVLYLVSKTLSISTWTSRFPNRRSFAVP*KILRANDAQMEQ
EIWSGDVGENGK*GLGCHGKLRSCLSGNVVGWGRWDTVLFFFLTHLVVNK*FQRIIKPYS
EDSNCLKHN*DIWILCAKRVSHHTRCVNCNRFITRNNNKNFINSKHT*RIKKYYKTLQSY
II*SCND*ISLLELCEGRQCILGPSVHEIGE*NN*VQRTCYERF*PNRX

>GCiWno533_e09.g1_1 this seq = seq 27
NEFSSVPKSCVHV*FVP*LSCYLLLTQKLWVQTITHKVTYMVTRKLARI**CDLRHQF*K
ENEKKIFFYKAVNFLQYIQLLNYIRDLFDGGTETTVSTSRWAILCMLHYPETQKKLRNEI
MTIIGKRLNFYITNTYLIFLLKGPTRQRVCRISQICLTPVLLYKKYSGSGL*PH*VCPIK
*MKMQRLTDTQFQKA*R*EISYIHLIVRLK*KP*ADGLIPKKLNDIFSSTL*CVVFHVYF
*LGVTKPVGGAQRSRCVGRNQAVKPERHLDDKENLXSRIT*YLSRWVHVIAWENNLLERK
SHLPDXMXXKVGVSSGPX
>GCiWno533_e09.g1_2
TNSARYPNRVFTYNLCRSSVVTCF*PRSYGYKQLPTKLHTW*LVSWHEFNNVIFAINFKK
KMKKKFFFIKL*TFCSTSSC*TTYVICSMAVPRPL*APVVGQYYVCCITRKLRKNYATK*
*LLLVSV*ISI*PTHI*YSC*RAQHASEYVA*VRYALHLCFYTRSTQVPDFSPTECAP*S
K*RCNG*RIHNSKRRNGKRFHTFI*SSD*NKNPEQMV*FPKN*TTFLAVHCDVSCFMSIF
N*VSPNLWAVHNDPDVWDETKQLNLSVTSMTRKTXSVESRDTFLGGSTSLLGRTTCSNGN
LIFLIXWXQRLEFLPDP
>GCiWno533_e09.g1_3
RIQLGTQIVCSRIICAVAQLLPASNPEVMGTNNYPQSYIHGNS*AGTNLIM*SSPSILKR
K*KKNFFL*SCELFAVHPAAKLHT*SVRWRYRDHCKHQSLGNTMYAALPGNSEKTTQRNN
DYYW*AFKFLYNQHIFNIPVKGPNTPASMSHKSDMPYTCAFIQEVLRFRTLAPLSVPHKV
NEDATVNGYTIPKGVTVRDFIHSFNRPIEIKTLSRWFNSQKIERHF*QYTVMCRVSCLFL
IRCHQTCGRCTTIQMCGTKPSS*T*ASPR*QGKLXQSNHVIPFSVGPRHCLGEQLARTEI
SSS*XHGXKGWSFFRT

>GCiWno7_b18.b1 CHROMAT_FILE: GCiWno7_b18.b1 PHD_FILE: GCiWno7_b18.b1.phd.1 CHEM:
           term DYE: big TIME: Sat Sep  1 16:00:22 2001 TEMPLATE:
           GCiWno7_b18 DIRECTION: fwd
          Length = 905

 Score =  132 bits (329), Expect = 1e-30
 Identities = 65/86 (75%), Positives = 66/86 (76%)
 Frame = -3

Query: 1   MIELVLPDLSIAPTILTLICLLLFYTWYXXXXXXXXXXXXXXIVGVLPFLEKYSERTMHK 60
           MIELVLPD SIA  ILTL CL LFYTWY              IVGV PFLEKYSERTMHK
Sbjct: 810 MIELVLPDXSIARQILTLXCLYLFYTWYRRPSRFPPGPRGFPIVGVCPFLEKYSERTMHK 631

Query: 61  WSKKYGPVMSVRMGNEDWVVMGNYEA 86
           WSKKYGPVMSVRMGN+DWVVMGNYEA
Sbjct: 630 WSKKYGPVMSVRMGNDDWVVMGNYEA 553

PSVGVLPFLEKYSERTMHKWSKKYGPVMSVRMGNDDWVVMGNYE 286 not seq 2 or 4
Two diffs with seq above probably same gene



QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIG = seq 2 (1)
QDRVPAMNDKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP = seq 4
NLWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSKHVVAFSVGPRHCLGEQLARMEYFIYLVSMVQKFEFF = seq 4
Gap 
KQIARVV = seq 4

DEV13827.y1 
DEV13827.y1  
DEV17948.x1 I-HELIX
DEV19056.y1 
DEV25829.x1 I-HELIX OPPOSITE END OF SEQ 2
DEV26097.x1 I-HELIX
DEV31420.x1 N-TERM
DEV36161.x1  
DEV39712.x1  
DEV46240.x1  
DEV5183.x01  
DEV9515.x1   
LGK545.x1 FIRST AND LAST PART = SEQ 1 BUT DIFFERS IN MIDDLE
LQW146181.x1 I-HELIX OPPOSITE END OF SEQ 1
LQW146181.y1 
LQW183999.x1 I-HELIX OPPOSITE END OF SEQ 1
LQW183999.y1 
LQW188756.y1 
LQW198468.y1 
LQW227602.y1 
LQW258179.y1 
LQW259311.x1 
LQW259311.x2 
LQW259311.y1 I-HELIX OPPOSITE END OF SEQ 1
LQW80689.x1 
LQW80689.x1 
LQW95486.y1  



LQW198468.x1 use to compare joint 
LQW198468.x1.phd.1 LQW198468.y1 

           13:47:14 2001 TEMPLATE: LQW198468 DIRECTION: fwd
          Length = 1003

 Score =  196 bits (493), Expect = 6e-50
 Identities = 98/121 (80%), Positives = 102/121 (83%), Gaps = 14/121 (11%)
 Frame = +3

Query: 1   QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIG------------- 47
           QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIG             
Sbjct: 186 QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGENL*TIIDVM*LK 365

Query: 48  -KKIQARHRVPAMNDKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTT 106
            KK   + RVPAMNDKAQMPYTCAFMQEVFRYRTLVPLS++HMTN+DVVLNGY IPKGTT
Sbjct: 366 LKKNSGQDRVPAMNDKAQMPYTCAFMQEVFRYRTLVPLSVVHMTNQDVVLNGYTIPKGTT 545

Query: 107 V 107
           V
Sbjct: 546 V 548

LQW80689.x1 

           CHEM: term DYE: ET TIME: Fri May  4 11:53:29 2001
           TEMPLATE: LQW80689 DIRECTION: fwd
          Length = 488

 Score =  113 bits (281), Expect(2) = 4e-49
 Identities = 52/56 (92%), Positives = 55/56 (97%)
 Frame = +2

Query: 48  KKIQARHRVPAMNDKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPK 103
           KKIQARHRVPAMNDKAQMPYTCAFMQEVFRYRTLVPLS++HMTN+DVVLNGY IPK
Sbjct: 320 KKIQARHRVPAMNDKAQMPYTCAFMQEVFRYRTLVPLSVVHMTNQDVVLNGYTIPK 487

 Score =  101 bits (249), Expect(2) = 4e-49
 Identities = 47/50 (94%), Positives = 49/50 (98%)
 Frame = +1

Query: 1   QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGKKI 50
           QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIG+ +
Sbjct: 136 QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGENL 285

>LQW80689.x1
>lcl|LQW80689.x1 CHROMAT_FILE: LQW80689.x1 PHD_FILE: LQW80689.x1.phd.1 CHEM:
term DYE: ET TIME: Fri May 4 11:53:29 2001 TEMPLATE: LQW80689 DIRECTION: fwd 
TGGTACTTTAAGAACACATTTAAGCATATATCCATATACATTTTTCATTTTTCGTTGGTATGCTCCTTAGAAAACTTCCG

ATACTTTGNCGAACTTCTTTTAANACTTACAATACGTCCTTCTATTTAGGACCTACAACTGTTGCAATATGTTCGGGACT

TGTTTGTTGCTGGAACCGAAACGACAACCAGCACACTAAGGTGGTCAATACTTTGCATGATTCATAATCCGGAAAAGCAA

GAAAAATTAAGAAAAGAAATATGTGATGTCATTGGTGAGAATTTATAAACAATTATTGATGTTATGTAGTTAAAACTTAA

AAAAAATTCAGGCCAGGCATAGGGTTCCAGCGATGAATGACAAAGCTCAGATGCCTTACACTTGCGCGTTCATGCAGGAA

GTTTTCAGATACCGGACTCTGGTTCCCTTAAGCGTAGTGCATATGACTAATCAAGACGTTGTACTGAACGGTTATACAAT

ACCCAAAG

>LQW80689.x1_1
WYFKNTFKHISIYIFHFSLVCSLENFRYFXELLLXLTIRPSI*DLQLLQYVRDLFVAGTE
TTTSTLRWSILCMIHNPEKQEKLRKEICDVIGENL*TIIDVM*LKLKKNSGQA*GSSDE* frameshift here
QSSDALHLRVHAGSFQIPDSGSLKRSAYD*SRRCTERLYNTQX
>LQW80689.x1_2
GTLRTHLSIYPYTFFIFRWYAP*KTSDTLXNFF*XLQYVLLFRTYNCCNMFGTCLLLEPK
RQPAH*GGQYFA*FIIRKSKKN*EKKYVMSLVRIYKQLLMLCS*NLKKIQARHRVPAMND
KAQMPYTCAFMQEVFRYRTLVPLSVVHMTNQDVVLNGYTIPKX
>LQW80689.x1_3
VL*EHI*AYIHIHFSFFVGMLLRKLPILXRTSFXTYNTSFYLGPTTVAICSGLVCCWNRN
DNQHTKVVNTLHDS*SGKARKIKKRNM*CHW*EFINNY*CYVVKT*KKFRPGIGFQR*MT
KLRCLTLARSCRKFSDTGLWFP*A*CI*LIKTLY*TVIQYPK

>rciad045g08 seq a
          Length = 682

 Score =  201 bits (505), Expect = 4e-51
 Identities = 97/109 (88%), Positives = 102/109 (92%)
 Frame = -3

Query: 1   QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGKKIQARHRVPAMN 60
           QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIG+      RVPAMN
Sbjct: 662 QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGQD-----RVPAMN 498

Query: 61  DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 109
           DKAQMPYTCAFMQEVFRYRTLVPLS++HMTN+DVVLNGY IPKGTT+SP
Sbjct: 497 DKAQMPYTCAFMQEVFRYRTLVPLSVVHMTNQDVVLNGYTIPKGTTISP 351

>rciad045g08
ACCCCCGATGAATATTTTTATGGTTGAACCGCATCGTTAAATTAAACTATCTTTGCAATTTGCTTGAACCGCAAAGGAAC
AAATACAACACCACTCGACCCGTCTTCAACATCTGGAAGATCTGGTTCATTCGGATCCGGAAAAAACTCAAACTTCTGAA
CCATTGAAACTAAGTAGATGAAATATTCCATTCGAGCAAGTTGTTCTCCCAAGCAATGACGTGGACCAATCGAGAAAGGT
ATCACGTGTTTAGACTGAACAAAGTTTCCTTTGTCATCGAGGTGACGCTCAGGTTTAAACTTGCTTGGTTCGTCCCACAC
ATCTGGATTGTTGTGCACCGCCCACAGGTTTGGTGATATTGTTGTTCCTTTGGGTATTGTATAACCGTTCAGTACAACGT
CTTGATTAGTCATATGCACTACGCTTAAGGGAACCAGAGTCCGGTATCTGAAAACTTCCTGCATGAACGCGCAAGTGTAA
GGCATCTGAGCTTTGTCATTCATCGCTGGAACCCTATCCTGGCCAATGACATCACATATTTCTTTTCTTAATTTTTCTTG
CTTTTCCGGATTATGAATCATGCAAAGTATTGACCACCTTAGTGTGCTGGTTGTCGTTTCGGTTCCAGCAACAAACAAGT
CCCGAACATATTGCAACAGTTGTAGGTCTGTGTATGACGAGT

>rciad045g08_6 identical to seq 2
SSYTDLQLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGQDRVPAM
NDKAQMPYTCAFMQEVFRYRTLVPLSVVHMTNQDVVLNGYTIPKGTTISPNLWAVHNNPD
VWDEPSKFKPERHLDDKGNFVQSKHVIPFSIGPRHCLGEQLARMEYFIYLVSMVQKFEFF
PDPNEPDLPDVEDGSSGVVFVPLRFKQIAKIV*
>cign065e15 seq a
          Length = 579

 Score =  201 bits (505), Expect = 4e-51
 Identities = 97/109 (88%), Positives = 102/109 (92%)
 Frame = +3

Query: 1   QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGKKIQARHRVPAMN 60
           QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIG+      RVPAMN
Sbjct: 192 QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGQD-----RVPAMN 356

Query: 61  DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 109
           DKAQMPYTCAFMQEVFRYRTLVPLS++HMTN+DVVLNGY IPKGTT+SP
Sbjct: 357 DKAQMPYTCAFMQEVFRYRTLVPLSVVHMTNQDVVLNGYTIPKGTTISP 503

>cign065e15
TTCNGCACGAGGCACCGTTTAGCCGTATCAACAATCAACTAATGACGGATGTGAGAGTAATTTTGCAAATGTTAAGAGAA
ATACTGTCCGAGCACAAGTCGACATTTAACAAAGATGACGTCCGAGATTTTATCGATGCTTTCATCGCTGAGCAAAATTC
AGAAAGCAAACACTCGTCATACACAGACCTACAACTGTTGCAATATGTTCGGGACTTGTTTGTTGCTGGAACCGAAACGA
CAACCAGCACACTAAGGTGGTCAATACTTTGCATGATTCATAATCCGGAAAAGCAAGAAAAATTAAGAAAAGAAATATGT
GATGTCATTGGCCAGGATAGGGTTCCAGCGATGAATGACAAAGCTCAGATGCCTTACACTTGCGCGTTCATGCAGGAAGT
TTTCAGATACCGGACTCTGGTTCCCTTAAGCGTAGTGCATATGACTAATCAAGACGTTGTACTGAACGGTTATACAATAC
CCAAAGGAACAACAATATCACCAAACCTGTGGGCGGTGCACAACAATCCAGATGTGTGGGACGAACCAAGCAAGTTTAAA
CCTGAGCGTCACCTCGATG

XHEAPFSRINNQLMTDVRVILQMLREILSEHKSTFNKDDVRDFIDAFIAEQNSESKHSSY
TDLQLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGQDRVPAMNDK
AQMPYTCAFMQEVFRYRTLVPLSVVHMTNQDVVLNGYTIPKGTTISPNLWAVHNNPDVWD
EPSKFKPERHLD

Combined = seq 2
HEAPFSRINNQLMTDVRVILQMLREILSEHKSTFNKDDVRDFIDAFIAEQNSESKH
SSYTDLQLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGQDRVPAM
NDKAQMPYTCAFMQEVFRYRTLVPLSVVHMTNQDVVLNGYTIPKGTTISPNLWAVHNNPD
VWDEPSKFKPERHLDDKGNFVQSKHVIPFSIGPRHCLGEQLARMEYFIYLVSMVQKFEFF
PDPNEPDLPDVEDGSSGVVFVPLRFKQIAKIV*

>rcieg032b06 seq a
          Length = 764

 Score =  201 bits (505), Expect = 4e-51
 Identities = 97/109 (88%), Positives = 102/109 (92%)
 Frame = -2

Query: 1   QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGKKIQARHRVPAMN 60
           QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIG+      RVPAMN
Sbjct: 706 QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGQD-----RVPAMN 542

Query: 61  DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 109
           DKAQMPYTCAFMQEVFRYRTLVPLS++HMTN+DVVLNGY IPKGTT+SP
Sbjct: 541 DKAQMPYTCAFMQEVFRYRTLVPLSVVHMTNQDVVLNGYTIPKGTTISP 395

>ciht001p11 seq a
          Length = 629

 Score =  196 bits (493), Expect = 9e-50
 Identities = 95/109 (87%), Positives = 100/109 (91%)
 Frame = +1

Query: 1   QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGKKIQARHRVPAMN 60
           QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIG+      RVPAMN
Sbjct: 292 QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGQD-----RVPAMN 456

Query: 61  DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 109
           DKA MPYTCAFMQEVF YRTLVPLS++HMTN+DVVLNGY IPKGTT+SP
Sbjct: 457 DKAXMPYTCAFMQEVFXYRTLVPLSVVHMTNQDVVLNGYTIPKGTTISP 603


>cign008n15 seq b
          Length = 622

 Score =  195 bits (490), Expect = 2e-49
 Identities = 96/109 (88%), Positives = 98/109 (89%)
 Frame = +2

Query: 1   QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGKKIQARHRVPAMN 60
           QLL YV DLF AGTETTTSTL WSILCMIHNPEKQEKLRKEIC V+G+      RVPAMN
Sbjct: 125 QLLHYVVDLFEAGTETTTSTLMWSILCMIHNPEKQEKLRKEICSVVGQD-----RVPAMN 289

Query: 61  DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 109
           DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP
Sbjct: 290 DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 436

>cign008n15
TCGGCACGAGGGAATTGTTTCTGAACACAACTCGACATTTAACAAAGATGACGCCCGGGATTTTATCGATGCTTTTATTG
CTGAGAAAAACTCTCAAAACAAACACTCGTCATTTACTGATTCACAGCTGCTGCACTATGTGGTTGACTTATTCGAGGCT
GGAACCGAAACGACAACCAGCACACTAATGTGGTCAATACTTTGCATGATTCATAATCCGGAAAAGCAAGAAAAACTAAG
AAAAGAAATCTGTAGTGTTGTAGGCCAGGATAGGGTTCCAGCGATGAATGACAAAGCTCAGATGCCTTACACTTGCGCGT
TCATGCAGGAAGTTTTCAGATACCGGACTCTGGTTCCCTTAAGCTTAATGCATATGACCAATGAAGATGTCGTACTTAAC
GGTTACAATATTCCGAAGGGAACAACGGTGTCACCTAATCTGTGGGCGGTGCACAACGATCCAGATGTGTGGGACGAACC
AAGCAAGTTTAAACCTGAGCGTCACCTCGATGACAAAGGAAACTTTGTTCAGTCTAAACACGTAGTCGCTTTCTCGGTGG
GTCCACGTCATTGCTTGGGAGAACAACTTGCTCGAATGGAATATTTCATCTACTTAGTTTCA

>cign008n15_2 identical to seq 4
GIVSEHNSTFNKDDARDFIDAFIAEKNSQNKHSSFTDSQLLHYVVDLFEAGTETTTS
TLMWSILCMIHNPEKQEKLRKEICSVVGQDRVPAMNDKAQMPYTCAFMQEVFRYRTLVPL
SLMHMTNEDVVLNGYNIPKGTTVSPNLWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSKH
VVAFSVGPRHCLGEQLARMEYFIYLVS

>cign022n24 seq b
          Length = 675

 Score =  195 bits (490), Expect = 2e-49
 Identities = 96/109 (88%), Positives = 98/109 (89%)
 Frame = +2

Query: 1   QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGKKIQARHRVPAMN 60
           QLL YV DLF AGTETTTSTL WSILCMIHNPEKQEKLRKEIC V+G+      RVPAMN
Sbjct: 77  QLLHYVVDLFEAGTETTTSTLMWSILCMIHNPEKQEKLRKEICSVVGQD-----RVPAMN 241

Query: 61  DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 109
           DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP
Sbjct: 242 DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 388

>cign022n24
TCGGCACGAGGATTTTATCGATGCTTTTATTGCTGAGAAAAACTCTCAAAACAAACACTCGTCATTTACTGATTCACAGC
TGCTGCACTATGTGGTTGACTTATTCGAGGCTGGAACCGAAACGACAACCAGCACACTAATGTGGTCAATACTTTGCATG
ATTCATAATCCGGAAAAGCAAGAAAAACTAAGAAAAGAAATCTGTAGTGTTGTAGGCCAGGATAGGGTTCCAGCGATGAA
TGACAAAGCTCAGATGCCTTACACTTGCGCGTTCATGCAGGAAGTTTTCAGATACCGGACTCTGGTTCCCTTAAGCTTAA
TGCATATGACCAATGAAGATGTCGTACTTAACGGTTACAATATTCCGAAGGGAACAACGGTGTCACCTAATCTGTGGGCG
GTGCACAACGATCCAGATGTGTGGGACGAACCAAGCAAGTTTAAACCTGAGCGTCACCTCGATGACAAAGGAAACTTTGT
TCAGTCTAAACACGTAGTCGCTTTCTCGGTGGGTCCACGTCATTGCTTGGGAGAACAACTTGCTCGAATGGAATATTTCA
TCTACTTAGTTTCAATGGTTCAGAAGTTTGAGTTTCTACCGGATCCGAATGAACCGAACCTTCCAGATATTGAAAAAGGG
TCGAATGGAGCTGCATTCGTTCCTCTGCCCTTTAA

>cign022n24_2
DFIDAFIAEKNSQNKHSSFTDSQLLHYVVDLFEAGTETTTSTLMWSILCMIHNPEKQ
EKLRKEICSVVGQDRVPAMNDKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYN
IPKGTTVSPNLWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSKHVVAFSVGPRHCLGEQL
ARMEYFIYLVSMVQKFEFLPDPNEPNLPDIEKGSNGAAFVPLPF

Combined identical to seq 4
GIVSEHNSTFNKDDARDFIDAFIAEKNSQNKHSSFTDSQLLHYVVDLFEAGTETTTS
TLMWSILCMIHNPEKQEKLRKEICSVVGQDRVPAMNDKAQMPYTCAFMQEVFRYRTLVPL
SLMHMTNEDVVLNGYNIPKGTTVSPNLWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSKH
VVAFSVGPRHCLGEQLARMEYFIYLVSMVQKFEFLPDPNEPNLPDIEKGSNGAAFVPLPF


>ciad086a13 seq b
          Length = 549

 Score =  195 bits (490), Expect = 2e-49
 Identities = 96/109 (88%), Positives = 98/109 (89%)
 Frame = +2

Query: 1   QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGKKIQARHRVPAMN 60
           QLL YV DLF AGTETTTSTL WSILCMIHNPEKQEKLRKEIC V+G+      RVPAMN
Sbjct: 11  QLLHYVVDLFEAGTETTTSTLMWSILCMIHNPEKQEKLRKEICSVVGQD-----RVPAMN 175

Query: 61  DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 109
           DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP
Sbjct: 176 DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 322

>cinc015m09 seq b
          Length = 658

 Score =  195 bits (490), Expect = 2e-49
 Identities = 96/109 (88%), Positives = 98/109 (89%)
 Frame = +2

Query: 1   QLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGKKIQARHRVPAMN 60
           QLL YV DLF AGTETTTSTL WSILCMIHNPEKQEKLRKEIC V+G+      RVPAMN
Sbjct: 275 QLLHYVVDLFEAGTETTTSTLMWSILCMIHNPEKQEKLRKEICSVVGQD-----RVPAMN 439

Query: 61  DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 109
           DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP
Sbjct: 440 DKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTTVSP 586

>best matches to CYP11A1
>scf/ciona01/G126/seq_dir/hrs/G126P69032R.T0/G126P69032RA7.T0.seq    722 (07)
            722  ABI
            Length = 722

  Plus Strand HSPs:

 Score = 221 (77.8 bits), Expect = 3.3e-17, P = 3.3e-17
 Identities = 51/188 (27%), Positives = 103/188 (54%), Frame = +1

Query:   320 VTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKA 379
             +T++   G DT + T+ W L  +A+N ++Q+ + AE++        +++ M++ +P  +A
Sbjct:   112 ITDLFMAGTDTMATTVHWSLVFLAQNPEIQNKMAAEIIKVTGNDVINVS-MMESMPYTRA 288

Query:   380 SIKETLRLHPI-SVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPT 438
              + E+ R+ P+  ++L     +D+ ++D +IP  TLV   ++A+  +P ++ +PE+F P 
Sbjct:   289 VMYESTRMRPVFPLSLGHQATSDVTVKDNVIPKGTLVVANLWAIQNDPKWWKNPESFRPE 468

Query:   439 RWLSKDKNITYFRNL-GFGWGVRQCLGRRIAELEMTIFLINMLENFRV---EIQHLSDVG 494
             R ++++   T    +  F  G R CLG ++A     IFL N++  F+    E Q   D+ 
Sbjct:   469 RHITENGGFTKNEKIVPFSIGPRFCLGSQMATYHQFIFLANLVRTFKFRFHENQPEPDLT 648

Query:   495 TTFNLILMP 503
                  +L+P
Sbjct:   649 GVMTSVLLP 675
44% to mouse 2j6
112 ITDLFMAGTDTMATTVHWSLVFLAQNPEIQNKMAAEIIKVTGNDVINVSMMESMPYTRA 288
289 VMYESTRMRPVFPLSLGHQATSDVTVKDNVIPKGTLVVANLWAIQNDPKWWKNPESFRPE 468
469 RHITENGGFTKNEKIVPFSIGPRFCLGSQMATYHQFIFLANLVRTFKFRFHENQPEPDLT 648
649 GVMTSVLLP 675


>scf/ciona01/G126/seq_dir/hrs/G126P605845F.T0/G126P605845FG6.T0.seq    701 (27)
            0    701  ABI
            Length = 701

  Plus Strand HSPs:

 Score = 217 (76.4 bits), Expect = 8.9e-17, P = 8.9e-17
 Identities = 46/166 (27%), Positives = 95/166 (57%), Frame = +2

Query:   320 VTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKA 379
             +T++   G DT + T+ W L  +A+N ++Q+ + AE++        +++ M++ +P  +A
Sbjct:   149 ITDLFMAGTDTMATTVHWSLVFLAQNPEIQNKMAAEIIKVTGNDVINVS-MMESMPYTRA 325

Query:   380 SIKETLRLHPI-SVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPT 438
              + E+ R+ P+  ++L     +D+ ++D +IP  TLV   ++A+  +P ++ +PE+F P 
Sbjct:   326 VMYESTRMRPVFPLSLGHQATSDVTVKDNVIPKGTLVVANLWAIQNDPKWWKNPESFRPE 505

Query:   439 RWLSKDKNITYFRNL-GFGWGVRQCLGRRIAELEMTIFLINMLENFR 484
             R ++++   T    +  F  G R CLG ++A     IFL N++  F+
Sbjct:   506 RHITENGGFTKNEKIVPFSIGPRFCLGSQMATYHQFIFLANLVRTFK 646

149 ITDLFMAGTDTMATTVHWSLVFLAQNPEIQNKMAAEIIKVTGNDVINVSMMESMPYTRA 325
326 VMYESTRMRPVFPLSLGHQATSDVTVKDNVIPKGTLVVANLWAIQNDPKWWKNPESFRPE 505
506 RHITENGGFTKNEKIVPFSIGPRFCLGSQMATYHQFIFLANLVRTFK 646

>scf/ciona01/G126/seq_dir/hrs/G126P609638F.T0/G126P609638FH3.T0.seq    726 (23)
            0    726  ABI
            Length = 726

  Plus Strand HSPs:

 Score = 195 (68.6 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
 Identities = 56/199 (28%), Positives = 98/199 (49%), Frame = +1

Query:   311 MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATM 370
             +S  DI+  V   +  G DTT+  + W +Y + R+  +Q  +  E+        GDM T+
Sbjct:   109 LSLSDIQEEVDTFMFEGHDTTAAAMTWTIYLIGRHPAIQARIHEEL---DDVFGGDMGTI 279

Query:   371 ----LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREP 426
                 LQ + LL+ +IKE+LR+ P    + R    +  +  + IPA T V + I +L   P
Sbjct:   280 TNSHLQKLSLLERTIKESLRMFPSVPFIGRVTTEECSVGSHSIPAGTQVAIFIDSLHHNP 459

Query:   427 TFFFDPENFDPTRWLSKDKNITY-FRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRV 485
             + + D + FDP R+L ++    + +  + F  G R C+G++ A +E  + L  +L  + +
Sbjct:   460 SVWPDVDRFDPDRFLPENCVGRHPYSFIPFSAGPRNCIGQKFALMEEKVLLTQILRKYSI 639

Query:   486 EIQ-HLSDVGTTFNLILMPEKP 506
                    D+    +LIL    P
Sbjct:   640 HSHDEEEDLRKQADLILRSSTP 705
50% to 4V2 human 52% to 4V5 fugu 75% to seq 115 
NFLPPQDTRRMAFLDVLLRAESEDGRS
109 LSLSDIQEEVDTFMFEGHDTTAAAMTWTIYLIGRHPAIQARIHEELDDVFGGDMGTI 279
280 TNSHLQKLSLLERTIKESLRMFPSVPFIGRVTTEECSVGSHSIPAGTQVAIFIDSLHHNP 459
460 SVWPDVDRFDPDRFLPENCVGRHPYSFIPFSAGPRNCIGQKFALMEEKVLLTQILRKYSI 639
640 HSHDEEEDLRKQADLILRSSTP 705


 Score = 54 (19.0 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
 Identities = 15/43 (34%), Positives = 20/43 (46%), Frame = +1

Query:   166 NFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFE 208
             NFLP  D     F+ VL R   + G      DI +++  F FE
Sbjct:    28 NFLPPQDTRRMAFLDVLLRAESEDGRSLSLSDIQEEVDTFMFE 156

>best matches to 27A1

>scf/ciona01/G126/seq_dir/hrs/G126P601882R.T0/G126P601882RC8.T0.seq    734
            0    734  ABI
            Length = 734

  Minus Strand HSPs:

 Score = 247 (86.9 bits), Expect = 5.1e-20, P = 5.1e-20
 Identities = 57/210 (27%), Positives = 105/210 (50%), Frame = -3

Query:   320 LSPREAMGSLPELLMAGVDTTSNTLTWALYHLSKDPEIQEALHEEVVGVVPA--GQVPQH 377
             LS  +    +   +  G DTT+  +TW +Y + + P IQ  +HEE+  V     G +  +
Sbjct:   696 LSLSDIQEEVDTFMFEGHDTTAAAMTWTIYLIGRHPAIQARIHEELDDVFGGDMGTIT-N 520

Query:   378 KDFAHMPLLKAVLKETLRLYPVVPTNSRIIEKEIEVDGFLFPKNTQFVFCHYVVSRDPTA 437
                  + LL+  +KE+LR++P VP   R+  +E  V     P  TQ       +  +P+ 
Sbjct:   519 SHLQKLSLLERTIKESLRMFPSVPFIGRVTTEECSVGSHSIPAGTQVAIFIDSLHHNPSV 340

Query:   438 FSEPESFQPHRWLRNSQPATPRIQHPFGSVPFGYGVRACLGRRIAELEMQLLLARLIQKY 497
             + + + F P R+L    P     +HP+  +PF  G R C+G++ A +E ++LL ++++KY
Sbjct:   339 WPDVDRFDPDRFL----PENCVGRHPYSFIPFSAGPRNCIGQKFALMEEKVLLTQILRKY 172

Query:   498 KVVLAPETGELKSVARIVLVPNKKVGLQFLQR 529
              +    E  +L+  A ++L  +  + +    R
Sbjct:   171 SIHSHDEEEDLRKQADLILRSSTPLNISLTPR 76
75% to seq 115 49% to 4V2 human
NFLPPQDTRRMAFLDVLLRAESEDGRS
696 LSLSDIQEEVDTFMFEGHDTTAAAMTWTIYLIGRHPAIQARIHEELDDVFGGDMGTITN 520
519 SHLQKLSLLERTIKESLRMFPSVPFIGRVTTEECSVGSHSIPAGTQVAIFIDSLHHNPSV 340
339 WPDVDRFDPDRFLPENCVGRHPYSFIPFSAGPRNCIGQKFALMEEKVLLTQILRKY 172
171 SIHSHDEEEDLRKQADLILRSSTPLNISLTPR 76

>sequence 38, 65 2 accessions 50% to 2J2
VRDLFMAGTDTTSSTTCWIILFLCRYPEVQRKMQEEVDQVLGSNGVPKMALAEKMPYTRAVIQ
EIARMRPTLPLSVPHCTTQDTMMMGYKIPKDTIVLTNIWGIHHDEKLWKNPYDFNPERH 149
LDSNGNFVKSSNIMQFNIGLRSCLGQQLAKMELFLLTTSLCRHFSFSVVGEVDMEGESMVTLRPCSMEVVATKRA*
DEV34315.x1 
LQW188368.y1
LQW143417.x1 
LQW149539.y1
LQW220722.y1

>SEQUENCE 34, 52, 71, 217 74% TO SEQ 29, 60% to seq 65, 39% TO 2C9
MLDILLSCIRAWFSTITLSIIVFYVTWHYWNKRTPGSPPGPRGFPFIGAITSIRKHPEHVMTKWNKEYGPVCMVRLGFKDVLVIGS
YEAAHEAYVKSQDFLDRPSPFGLEILGGGYGLFPIAYGSFHQEQRRFGLNTLREHGMGRRVLESTILQYAEELCDRLETKMSAPVL
LDQEVYIAVSSTIAHIVFGHNTMQDSPEFRDMILWMLRPNTATVLAGILVFAPYLKHLPFFRGVHNDSRALRLKLESLNLKEVKKH
DKTRDPSDPRDFIDSFLNEMDK (1) boundary not consistent with related sequences
HFKGKIDPNWETYSSFSDQQLVSM (0)
VRDLFLAGTDTTSATTCWIILFLCKYPDVQRRMQKEIDDVIGENGIPKLALAERLPFTRAVIQ (0)
EMGRIRPNVPLAVPHCASRDSTLMGFNIPKDTIIMTNIWGIHHDEKTWKDPYKFNPDRHLDAEGNFVKSNHVMQFNIGLRSCLGQQ
LARMELFLITVTLFRKFFIELEPGCDIDMEGESLVSLRPYPFKVLLTKRI*
DEV10735.x1  exon 1 N-term to I-helix
DEV17022.x1  exon 1 N-term to I-helix
LQW166080.x1 exon 1 N-term to I-helix
LQW267527.x1 exon 1 N-term to I-helix
DEV41989.y1  exon 1 N-term to I-helix
DEV39698.x1  exon 1 N-term to I-helix
LQW44017.y1  exon 1 N-term to I-helix
LQW64492.x1  exon 1 N-term to I-helix
LQW33972.x1  exon 1 N-term to I-helix
LQW201553.y1 exon 2 I-helix
LQW222497.x1 exon 2 I-helix
LQW142648.x1 exon 2 I-helix
LWG3369.x1   exon 2 I-helix
DEV54722.x1  exon 2 I-helix
LQW151633.y1 exon 2 I-helix
LQW73069.x2  exon 2 I-helix
DEV39698.y1  exon 3 EXXR to end
LQW68269.y1  exon 3 EXXR to end
DEV41989.x1  exon 3 EXXR to end
DEV41989.x2  exon 3 EXXR to end
LQW73069.x2  exon 3 EXXR to end
LQW151633.y1 exon 3 EXXR to end
DEV49881.y1  exon 3 EXXR to end

>student assembly of seq 34 ortholog needs checking missing C-term (2 different genes)
68% to seq 65
MMEEVSIVQTIRGTFDTILLLAIVFYLTWHIWNRRSPLSPPGPRGIPLLGAITQLGKHPEHA
MMKWNQQYGPICMVRLGHKDV
LVLGSYEAAHEALVKNTHIADRPTHNIEVFYGGKGILMINSGSFHQEQRRFGLNTLREY
GMGRRALEPTILIYVNDLCDRIEKYGSDPFVIDGEVYLTISSTISHIVFGHDVIHDNPKFKEIIFKMIEPN
KLNVLAGILAFAPFLKHFPFFSTVHKSSKEFRLKLQSLIGEEVQEHKKTRDPTQSRDFIDSFLQAMEK (1?)
VQDGKLDPNWEPYSSFTIDQLTAM (0?)
VRDLFMAATDTTSSTICWIILFLCKNTDVQIKMQEEIDEVLGQNGILKYELATKMHYVRAVIQ (0)
LFKEIARLRPSVPLSLPHASNRDTSIMGYRIPKDTIVLTNIWGIHHDEKIWKNPYEFNPE
RHLDANGNFVKSKKVMQFNIGLRSCLGQQLANMELFLVTVSLFHRFSFSVVNPKIDMGGE
SMVSLRPYPYSVVATTRG*

G126P617768R.T0/G126P617768RB11.T0.seq   688  (37)
G126P65096R.T0/G126P65096RG8.T0.seq      738  (02)
G126P617150F.T0/G126P617150FA9.T0.seq    677  (38)

>POSSIBLE ORTH OF SEQ 38 and probable end of seq 34 orth.
  Minus Strand HSPs:
699 LFKEIARLRPSVPLSLPHASNRDTSIMGYRIPKDTIVLTNIWGIHHDEKIWKNPYEFNPE 520
519 RHLDANGNFVKSKKVMQFNIGLRSCLGQQLANMELFLVTVSLFHRFSFSVVNPKIDMGGE 340
339 SMVSLRPYPYSVVATTRG* 283
G126P64775F.T0/G126P64775FF5.T0.seq    724  (01) 
G126P602025R.T0/G126P602025RH2.T0.seq    720 (12)

>scf/ciona01/G126/seq_dir/hrs/G126P610830R.T0/G126P610830RG2.T0.seq    745
>scf/ciona01/G126/seq_dir/hrs/G126P610830R.T0/G126P610830RG2.T0.seq_4 745 0    745  ABI
                              SSPWFTGCKLVKITHNTLXIAPVIRQ*V*GDLATVRV*TPLVFV*TPPTCRM*TLISYTL
                              FHFQYLCCLNKFLYIKEMAGKNTIHIRVTKITI*SCGI*PEFYFTILRCSRN*LLQYVGC
                              L*TRFCLIRKLLG*DQAKEMPIYITLYTPI*PKY*V*QSDQVGSTLFFALFRYALN*LIN
                              FQYGDV*KRFFSI*GNCSLRTKRPSFSSTCFKQRYFDHGL*NSERHHRSYQHLGDSPGGK
                              NEFHHREL
                              >scf/ciona01/G126/seq_dir/hrs/G126P610830R.T0/G126P610830RG2.T0.seq_5 745 0    745  ABI
                              FFXMVYRL*AG*NNT*HTXNSSGNPTVSVRRSGDCPCVNPPGFCINTPDLSYVNTNFLYP
                              IPFPIFVLFKQILVY*GNGW*KHYTHQGDQNHNLILWYLT*VLFYNTQV*PKLITPICRL
                              FINAVLFNKEIARLRPS*GNAYIHNTIHPNITKILSLTV*PSGFHPVFCII*ICFKLIN*
                              LPVWGCLKTLFFYLRKLLVEDQASLFLFHMLQTEILRSWVIEFRKTPSFLPTFGGFTRRK
                              K*IPPQGAX
                              >scf/ciona01/G126/seq_dir/hrs/G126P610830R.T0/G126P610830RG2.T0.seq_6 745 0    745  ABI
                              LXHGLPAVSWLK*HITHXQ*LR*SDSECEAIWRLSVCKPPWFLYKHPRPVVCKH*FPIPY
                              SISNICAV*TNSCILRKWLVKTLYTSG*PKSQSNLVVFNLSFILQYSGVAEINYSNM*AV
                              YKRGFV**GNCSVETKLRKCLYT*HYTPQYNQNIEFNSLTKWVPPCFLHYLDML*IN*LT
                              SSMGMFKNAFFLFKEIAR*GPSVPLSLPHASNRDTSIMGYRIPKDTIVLTNIWGIHQEEK
                              MNSTTGSS

>scf/ciona01/G126/seq_dir/hrs/G126P602025R.T0/G126P602025RH2.T0.seq_4 720 0    720  ABI
                              KY*V*QFDQVGSTLFLHYLDML*IN*LTFRYG*CLKTPFFSI*GNCSFETKRPPFSSTCF
                              KQRYFDHGL*GSERYHRSYQHLGDSP*RKNMEESLRIQS*KASRREWQLR*IQESYAVQY
                              RTAELPWTATCKYGVILGHSFVVS*IFLFTCEP*D*HGRGKYGVITPISIRRRGHNTRVK
                              NVDRVFNPIEKYTDLYIKRY*QRAHHGLEFKPQNTRVTNLKETWSSG*EFPPHWSFSVQD
                              >scf/ciona01/G126/seq_dir/hrs/G126P602025R.T0/G126P602025RH2.T0.seq_5 720 0    720  ABI
                              ILSLTV*PSGFHPVFALFRYALN*LINFQVWVMFKNALFFYLRKLLV*DQASPFLFHMLQ
                              TEILRSWVIRFRKIPSFLPTFGGFTMTKKYGRILTNSILKGISTRMATSLNPRKLCSSIS
                              DCGVALDSNLQIWSYSWSQFRCFIDFPFHL*TLRLTWEGKVWCHYAHIHTASWPQHEGKE
                              RRQSV*PDRKIYRFIYKTILATSPSWVGI*APKYQGDKP*RNLVQRLGISTTLEFQRPRX
                              >scf/ciona01/G126/seq_dir/hrs/G126P602025R.T0/G126P602025RH2.T0.seq_6 720 0    720  ABI
                              NIEFNSLTKWVPPCFCII*ICFKLIN*LSGMGDV*KRPFFLFKEIARLRPSVPLSLPHAS
                              NRDTSIMGYKVPKDTIVLTNIWGIHHDEKIWKNPYEFNPERHLDANGNFVKSKKVMQFNI
                              GLRSCLGQQLANMELFLVTVSLFHRFSFSLVNPKIDMGGESMVSLRPYPYGVVATTRG*R
                              TSTECLTRSKNIPIYI*NDISNEPIMGWNLSPKIPG*QTLKKLGPAVRNFHHIGVSASKX

VMFKXAFFLFKEIARLRPSVPLSLPHASNRDTSIMGYRIPKDTIVLTNIWGIHHDEKIWK
                              NPYEFNPERHLDANGNFVKSKKVMQFNIGLRSCLGQQLANMELFLVTVSLFHRFSFSVVN
                              PKIDMGGESMVSLRPYPYSVVATTRG*RMSKECLTRSKHIPIYI*NDISNEPVMGSNLSP
                              KIPGWQTFKETLVQRLARPI*KE*YKNYLNDKTRRFRNKTRKKTG*KRIXPQERRIHXRK
                              S
                              >scf/ciona01/G126/seq_dir/hrs/G126P64775F.T0/G126P64775FF5.T0.seq_5 724 0    724  ABI
                              GDV*XRFFSI*GNCSFETKRPSFSSTCFKQRYFDHGL*NSERHHRSYQHLGDSP*RKNME
                              ESLRIQPRKASRREWQLR*IQESYAV*YRTA*LPWTATCKYGAILGHSFVVS*IFLFSCE
                              P*D*HGRGKYGVITPISIQRRGHNTRVKNVERVFNPIETYTDLYIKRY*QRARHGFEFKP
                              QNTRVANL*RNFGPAVSATDLKRII*KLP**QDQAVSKQNS*KNRVKANXTTGAEDSXXQ
                              KX
                              >scf/ciona01/G126/seq_dir/hrs/G126P64775F.T0/G126P64775FF5.T0.seq_6 724 0    724  ABI
                              *CLXTLFFYLRKLLV*DQASLFLFHMLQTEILRSWVIEFRKTPSFLPTFGGFTMTKKYGR
                              ILTNSTPKGISTRMATSLNPRKLCSLISDCVVALDSNLQIWSYSWSQFRCFIDFPFQL*T
                              LRLTWEGKVWCHYAHIHTASWPQHEGKECRKSV*PDRNIYRFIYKTILATSPSWVRI*AP
                              KYQGGKPLKKLWSSG*RDRFKKNNIKTTLMTRPGGFETKLVKKQGKSESHHRSGGFIXAK
                              V



>scf/ciona01/G126/seq_dir/hrs/G126P617150F.T0/G126P617150FA9.T0.seq_4 677 0    677  ABI
                              YYVIYHLLDHSFPLQEHGRPD*NARRNRRIVGTKRNPKIRARYQDALREGCDTGSCG*DV
                              TSAWAQYAINRLPTRNRNTEPNT*TIKRMNDCVAEWLIRPIHLFRFQI*KRGHRCWHRFI
                              SPLFLTVMRACKVSKHHIVFFPHGLPCCKLC*NNT*HTAIAPVIRQ*V*GDLATVRV*TP
                              LVFV*TPPTVRM*TLISYTLFHFQYL*SLNKFLYIKGIPPQGEIQ
                              >scf/ciona01/G126/seq_dir/hrs/G126P617150F.T0/G126P617150FA9.T0.seq_5 677 0    677  ABI
                              ILRHLPFVGSFFSFARTRTSRLKCKKK*TNCWDKTES*NTSSLPRCIT*GL*YRFVWVGC
                              DKCVGTIRY*QTSNSKPKHGTKYINNKTHERLCSGMVDSTDSPFPIPNIKTRP*VLASIH
                              ITSVPYRYASV*SKQTSHSFLSPWFTVL*AVLK*HITHCNSSGNPTVSVRRSGDCPCVNP
                              PGFCINTPDCPYVNTNFLYPIPFPIFVKFKQILVY*GNSTTGRDSX
                              >scf/ciona01/G126/seq_dir/hrs/G126P617150F.T0/G126P617150FA9.T0.seq_6 677 0    677  ABI
                              DTTSSTICWIILFLCKNTDVQIKMQEEIDELLGQNGILKYELATKMHYVRAVIQVRVGRM
                              *QVRGHNTLLTDFQLETETRNQIHKQ*NA*TIV*RNG*FDRFTFSDSKYKNEAIGVGIDS
                              YHLCSLPLCERVK*ANIT*FSFPMVYRAVSCVKITHNTLQ*LR*SDSECEAIWRLSVCKP
                              PWFLYKHPRLSVCKH*FPIPYSISNICEV*TNSCILREFHHRARFX

>scf/ciona01/G126/seq_dir/hrs/G126P617768R.T0/G126P617768RB11.T0.seq_4 688 0    688  ABI
                              RTGRFERPAFAC**MNLYV*RFVIFSWRQLILRHLPFVGSFFSFARTRTSRLKCKKK*MK
                              CWGRTES*NTSSPPRCITLGL*YRFVWIGCDKTSWA*YAINRLPTRNRNTEPKT*TIKRM
                              NDCVAKWLIRPIHFPIPNIKTRPWVLASIHITSVLHRYAIV*SKQTSHSFFPPWFTVL*A
                              VLK*HITHCYSSGNPTVGVRRSGDCPCVNPPGFCIYTPDCQCESTTWSS
                              >scf/ciona01/G126/seq_dir/hrs/G126P617768R.T0/G126P617768RB11.T0.seq_5 688 0    688  ABI
                              PYGAI*ATCFCVLINESLCLKVRDLFMAATDTTSSTICWIILFLCKNTDVQIKMQEEIDE
                              VLGQNGILKYELATKMHYVRAVIQVRVDRM*QNVVGIIRY*QTSNSKPKHGTKDINNKTY
                              ERLCSEMVDTTDSFSDSKYKNEAMGVGIDSYHLRSSPLCDRVK*ANIT*FFSXMVYSAVS
                              CVKITHNTLL*LR*SDSGCEAIWRLSVCKPPWFLYIHPRLSV*IHHMELX
                              >scf/ciona01/G126/seq_dir/hrs/G126P617768R.T0/G126P617768RB11.T0.seq_6 688 0    688  ABI
                              VRGDLSDLLLRVNK*ISMFKGS*SFHGGN*YYVIYHLLDHSFPLQEHGRPD*NARRNR*S
                              VGAERNPKIRARHQDALR*GCDTGSCG*DVTKRRGHNTLLTDFQLETETRNQRHKQ*NV*
                              TIV*RNG*YDRFIFRFQI*KRGHGCWHRFISPPFFTVMRSCKVSKHHIVFFXHGLQCCKL
                              C*NNT*HTAIAPVIRQWV*GDLATVRV*TPLVFVYTPPTVSVNPPHGAX

>scf/ciona01/G126/seq_dir/hrs/G126P64855R.T0/G126P64855RH11.T0.seq    689 (01)
>scf/ciona01/G126/seq_dir/hrs/G126P64855R.T0/G126P64855RH11.T0.seq_4 689 0    689  ABI
                              GGPGLXGRRK*MKCGAERES*K*RLATKRHYVRAVIQVRGDGSDKTWGA*YAINRLPTRN
                              RNTGPKT*TIKRRTMCSERVDTTDSFSDSKYKNEARVLGIDSYHLRSSPLADRVK*ANIT
                              *FFSPWFTVL*AVLK*HITHCYSSGNPTVGVGRSGDCPCVNPPGFCIYTPDGRV*TLISY
                              TLFHFQYLAGLNKFLYIKEMAE*KHYTHQGTKITI*SWGI*PECNSTTG
                              >scf/ciona01/G126/seq_dir/hrs/G126P64855R.T0/G126P64855RH11.T0.seq_5 689 0    689  ABI
                              GRSRIXRQKEIDEVWGRTGILKIEARHQEALR*GCDTGSWGWE*QNVGGIIRY*QTSNSK
                              PKHGTKDINNKT*NDV*RKG*YDRFIFRFQI*KRGQGVGHRFISPPFFTVSGSCKVSKHH
                              IVFFP MVYSAVSCVKITHNTLL*LR*SDSGCGAIWRLSVCKPPWFLYIHPR RSCVNINFL
                              YTIPFPIFGWFKQILVY*GNGGIKTLYTSGDQNHNLILGYLTGM*FHHRX
                              >scf/ciona01/G126/seq_dir/hrs/G126P64855R.T0/G126P64855RH11.T0.seq_6 689 0    689  ABI
                              REVPDXKAEGNR*SVGQNGNPKNRGSPPRGITLGL*YRFVGMGVTKRGGHNTLLTDFQLE
                              TETRDQRHKQ*NVERCVAKGLIRPIHFPIPNIKTRPGCWASIHITSVLHR*RIV*SKQTS
                              HSFFPHGLQCCKLC*NNT*HTAIAPVIRQWVWGDLATVRV*TPLVFVYTP PTVVCKH*FP
                              IHYSISNIWLV*TNSCILRKWRNKNTIHIRGPKSQSNLGVFNRNVIPPQG
LXHGLPAVSWLK*HITHXQ*LR*
SDSECEAIWRLSVCKPPWFLYKHPRPVVCKH*FPI
PYSISNICAV*TNSCILRKWLVKTLYTSG*PKSQSNLVVFNLSFILQYSGVAEINYSNM*AV
>scf/ciona01/G126/seq_dir/hrs/G126P65096R.T0/G126P65096RG8.T0.seq    738      0    738  ABI
TTTGACGCTGAAACTCCATGGTGGNAATTCGATACGTATCATTCTAGTGT
TGCCAAGAGGTCCAATCTAACGTATGATGAGCGCCAATAGGCAATTAATC
GGATAGCCTTAATACTTGCTCGTTTAGCCGTGTGTACTTTGTGTTTGGTG
GTGATATTACTAAATGTTTGAGCAAGCGTTACAAAGTTTCTTCTTTTACT
GGACTTAGTTTCAAATCCATGATGGGCTTGTTGCTTACACCATTTTCTAT
ATTTAAGTCGGTATATGTATTGGTGGCGTTATCCTCCTGCCACACGACCG
TACGGGCGATTTGAGCGACCTGCTTTTGCGTGTTAATAAATGAATCTCTA
TGTTTAAAGGTTCGTGATCTTTTCATGGCGGCAACTGATACTACGTCATC
TACCATTTGTTGGATCATTCTTTTCCTTTGCAAGAACACGGACGTCCAGA
TTAAAATGCAAGAAGAAATAGATGAAGTGTTGGGGCAGAACGGAATCCTA
AAATACGAGCTCGCCACCAAGATGCATTACGTTAGGGCTGTGATACAGGT
TCGTGTGGATAGGATGTGACAAAACGTCGTGGGCATAATACGCTATTAAC
AGACTTTCAACTCGAAACCGAAACACGGAACCAAAGACATAACCAATAAA
ACGTTTGAACCATTGTGTTTCGAAATGGTTGCAACCACCGATCCATTTCC
CGACTCCAAAAATAAAAACAAGCCATGTGTGAAGGCAT

>scf/ciona01/G126/seq_dir/hrs/G126P65096R.T0/G126P65096RG8.T0.seq_1 738 0    738  ABI
                              FDAETPWWXFDTYHSSVAKRSNLTYDERQ*AINRIALILARLAVCTLCLVVILLNV*ASV
                              TKFLLLLDLVSNP*WACCLHHFLYLSRYMYWWRYPPATRPYGRFERPAFAC**MNLYV*R
                              FVIFSWRQLILRHLPFVGSFFSFARTRTSRLKCKKK*MKCWGRTES*NTSSPPRCITLGL
                              *YRFVWIGCDKTSWA*YAINRLSTRNRNTEPKT*PIKRLNHCVSKWLQPPIHFPTPKIKT
                              SHV*RH
                              >scf/ciona01/G126/seq_dir/hrs/G126P65096R.T0/G126P65096RG8.T0.seq_2 738 0    738  ABI
                              LTLKLHGGNSIRIILVLPRGPI*RMMSANRQLIG*P*YLLV*PCVLCVWW*YY*MFEQAL
                              QSFFFYWT*FQIHDGLVAYTIFYI*VGICIGGVILLPHDRTGDLSDLLLRVNK*ISMFKG
                              S*SFHGGN*YYVIYHLLDHSFPLQEHGRPD*NARRNR*SVGAERNPKIRARHQDALR*GC
                              DTGSCG*DVTKRRGHNTLLTDFQLETETRNQRHNQ*NV*TIVFRNGCNHRSISRLQK*KQ
                              AMCEG
                              >scf/ciona01/G126/seq_dir/hrs/G126P65096R.T0/G126P65096RG8.T0.seq_3 738 0    738  ABI
                              *R*NSMVXIRYVSF*CCQEVQSNV**APIGN*SDSLNTCSFSRVYFVFGGDITKCLSKRY
                              KVSSFTGLSFKSMMGLLLTPFSIFKSVYVLVALSSCHTTVRAI*ATCFCVLINESLCLKV
                              RDLFMAATDTTSSTICWIILFLCKNTDVQIKMQEEIDEVLGQNGILKYELATKMHYVRAV
                              IQVRVDRM*QNVVGIIRY*QTFNSKPKHGTKDITNKTFEPLCFEMVATTDPFPDSKNKNK
                              PCVKA

  STLTGFVAIAPFLRHLPVFGMLYRKTMKFKQDIHDVIEKEIKEHEDTRDPKEPRDYVDSFLQAMEK (0)


>scf/ciona01/G126/seq_dir/hrs/G126P608952R.T0/G126P608952RB12.T0.seq    763
            0    763  ABI
            Length = 763

  Plus Strand HSPs:

 Score = 157 (55.3 bits), Expect = 3.4e-11, P = 3.4e-11
 Identities = 32/52 (61%), Positives = 39/52 (75%), Frame = +2

Query:     1 VRDLFMAATDTTSSTICWIILFLCKNTDVQIXMQEEIDELLGENGIPKLALA 52
             VRDLFMAATDTTSSTICWIILFLCK    ++  +++  +  G+NGI K  LA
Sbjct:   602 VRDLFMAATDTTSSTICWIILFLCKTRTSRLKCKKKXMKWWGQNGILKYELA 757

G126P64401F.T0/G126P64401FH9.T0.seq    724  

>scf/ciona01/G126/seq_dir/hrs/G126P618763R.T0/G126P618763RF3.T0.seq    724
            0    724  ABI
            Length = 724

  Plus Strand HSPs:

 Score = 406 (142.9 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
 Identities = 82/83 (98%), Positives = 83/83 (100%), Frame = +3

Query:     1 YRTYVILIILQDQNINGIKFRYRLIMHTFILYFYASVTKYKL*KFCVNLIQIG*QILVYT 60
             YRTYVILIILQDQNINGIKFRYRLIMHTFILYFYASVTKYKL*KFCVNLIQIG*QILVYT
Sbjct:   117 YRTYVILIILQDQNINGIKFRYRLIMHTFILYFYASVTKYKL*KFCVNLIQIG*QILVYT 296

Query:    61 LF*QTSVLGISGYITGPLTQLRV 83
             LF*QTSVLGISGYITGPLTQLR+
Sbjct:   297 LF*QTSVLGISGYITGPLTQLRL 365

 Score = 49 (17.2 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
 Identities = 9/15 (60%), Positives = 11/15 (73%), Frame = +2

Query:    76 GPLTQLRVVFILCHI 90
             G    ++VVFILCHI
Sbjct:   341 GTTNTVKVVFILCHI 385

>scf/ciona01/G126/seq_dir/hrs/G126P618763R.T0/G126P618763RF3.T0.seq_1 724 0    724  ABI
                              LRAELHVVEFVIQPNHVTLSTSFFKQWKRQSEVKILCKLIEHMLS*LYYKTKI*TV*SLG
                              IDL*CTHLFSIFMHQ*QNINCKNSA*TLYK*ANKFWSTHCFNKLQF*ELVVTLRDH*HS*
                              GCLYPLPYLTGMVLIN*ITGFNYFTGGNKSKLNQDGFADVQDGKLDPNWEPYSSFTIDQL
                              TAMVIYLNGSGCG*TTNRNLVK*ISCGSLNCIVI*FLLETVMPDKQQL*YKLENGNTKIP
                              VX
                              >scf/ciona01/G126/seq_dir/hrs/G126P618763R.T0/G126P618763RF3.T0.seq_2 724 0    724  ABI
                              SELSSMWWNS*SNPIT*LYRHLSSSNGKDRAK*KFYVNL*NICYLNYTTRPKYKRYKV*V
                              *TYNAHIYSLFLCISNKI*TVKILRKPYTNRLTNFGLHIVLTNFSFRN*WLHYGTTNTVK
                              VVFILCHI*LAWS*SIKSLGLIILQVVISQNSTKTDSLTYKMGNWIQTGNRTPHLP*IS*
                              PQW*FI*TGLAVVKRPTVI*LNELVVVV*IV*LFNFY*KR*CQINNNCDTN*KTAIQKFQ
                              L
                              >scf/ciona01/G126/seq_dir/hrs/G126P618763R.T0/G126P618763RF3.T0.seq_3 724 0    724  ABI
                              QS*APCGGIRDPTQSRDFIDIFLQAMEKTERSKNSM*TYRTYVILIILQDQNINGIKFRY
                              RLIMHTFILYFYASVTKYKL*KFCVNLIQIG*QILVYTLF*QTSVLGISGYITGPLTQLR
                              LSLSFAIFNWHGLNQLNHWV*LFYRW**VKTQPRRIR*RTRWEIGSKLGTVLLIYHRSAN
                              RNGNLFKRVWLWLNDQP*FS*MN*LW*FKLYSYLIFIRNGNAR*TTIVIQIRKRQYKNSS

>scf/ciona01/G126/seq_dir/hrs/G126P617020F.T0/G126P617020FA11.T0.seq_4 699 0    699  ABI
                              LIYHRSANRNGNLFKRVWLWLNDQP*X*LNELVVVV*IV*LFNFY*KR*CQINNNCDTN*
                              KTAIQKFQLW*LTWEVFKRTV*VYGIPLLLNNWVEWSRL*HLVSFIINIDSEYFAEITS*
                              R*LLLVSFVGICTDITSFHQVIQFGN*EEANTTSVIRIILVLPRRPNLTYDKRQ*AINRI
                              ALLLARLAVCTLCLVVILPNV*VSVTKFFLLLLGLVSNP*WACCGIPPQGENR
                              >scf/ciona01/G126/seq_dir/hrs/G126P617020F.T0/G126P617020FA11.T0.seq_5 699 0    699  ABI
                              HLP*IS*PQW*FI*TGLAVVKRPTVXLVK*ISCGSLNCIVI*FLLETVMPDKQQL*YKLE
                              NGNTKIPVMVVNMGSFQTDSVGVWNTAFVKQLGGMVPFITPSLVYYKHR*RILCGNYKLK
                              IITVGIVCWYLYRYHIISPSYSIWKLRRSQYYFRDTYHSSVAKEAQSNV**APIGN*PDS
                              LITCSFSRVYFVFGGDITKCLSKRYKVFSSFTGLSFKSMMGLLRNSTTGREQX
                              >scf/ciona01/G126/seq_dir/hrs/G126P617020F.T0/G126P617020FA11.T0.seq_6 699 0    699  ABI
                              SFTIDQLTAMVIYLNGSGCG*TTNRNXS*MN*LW*FKLYSYLIFIRNGNAR*TTIVIQIR
                              KRQYKNSSYGS*HGKFSNGQCRCMEYRFC*TIGWNGPVYNT*SRLL*T*IANTLRKLQVK
                              DNYCWYRLLVFVPISHHFTKLFNLETEKKPILLP*YVSF*CCQGGPI*RMISANRQLTG*
                              PYYLLV*PCVLCVWW*YYQMFE*ALQSFFFFYWA*FQIHDGLVAEFHHRARTX

>scf/ciona01/G126/seq_dir/hrs/G126P612515F.T0/G126P612515FG9.T0.seq_1 715 (29)
                              DSRPVVEFFQTDSVGVWNTAFVNNWVEWSRL*HLVSFIINIDSEYFAEITS*R*LLLVSF
                              VGICTDITSFHQVIQFGN*EEANTTSVIRIILVLPRRPNLTYDKRQ*AINRIALLLARLA
                              VCTLCLVVILPNV*VSVTKFFLLLLGLVSNP*WACC*NYFLYLSRYMYWWR*PFCHTTHD
                              RFEWTALRVNK*TSMFKGS*SFHGGN*YYVIYHLLDHSFPLQEHGRPDXNARRNRRIVX
                              >scf/ciona01/G126/seq_dir/hrs/G126P612515F.T0/G126P612515FG9.T0.seq_2 715 0    715  ABI
                              ILALWWNSFKRTV*VYGIPLLLTIGWNGPVYNT*SRLL*T*IANTLRKLQVKDNYCWYRL
                              LVFVPISHHFTKLFNLETEKKPILLP*YVSF*CCQGGPI*RMISANRQLTG*PYYLLV*P
                              CVLCVWW*YYQMFE*ALQSFFFFYWA*FQIHDGLVAKTIFYI*VGICIGGVNRSATRPTT
                              DLSGLLCVLINEPLCLKVRDLFMAATDTTSSTICWIILFLCKNTDVQIXMQEEIDELL
                              >scf/ciona01/G126/seq_dir/hrs/G126P612515F.T0/G126P612515FG9.T0.seq_3 715 0    715  ABI
                              FSPCGGILSNGQCRCMEYRFC*QLGGMVPFITPSLVYYKHR*RILCGNYKLKIITVGIVC
                              WYLYRYHIISPSYSIWKLRRSQYYFRDTYHSSVAKEAQSNV**APIGN*PDSLITCSFSR
                              VYFVFGGDITKCLSKRYKVFSSFTGLSFKSMMGLLLKLFSIFKSVYVLVALTVLPHDPRP
                              I*VDCFAC**MNLYV*RFVIFSWRQLILRHLPFVGSFFSFARTRTSRLXCKKK*TNC

>SEQUENCE 65, 78 81% TO SEQ 29 35% TO 2A6 may be in a cluster with 29
MEISVQSISSIFDTILLVLIVSYLTWHFWNQRSAWA
PPGPRGLPFIGPITSIRIHPEHAMMKWNQQYGPVCMVRFGFKDILLLGSYEAAHEAL exon 1
VKNMDLADRPSNGIAVFKGGKGILMTKFGSYHQEQRRFSLNKLREYGMGRRALEPTI exon 1
LLYSNELCERIEKFGSKPFYIDMEIYKAISSTICHIVFGHNVIEENEDFKEIINTLN exon 1
KKSKLNVLSGILAFAPFLRFLPVFSTIHAKSVNFQQTLHALVRQEISEHEKTRDPKE exon 1
PRDYIDSFLNEMDK (0) exon 1 JOINT PROBLEM gc not gt
DFRGQVDPNWKQYSSFTYEQLVAM (0) EST SUPPORT exon 2 from PNW on
CRDLFMAGTDTTSSTTSWIILFLCRYPEVQRKMQEEADQVLGSNGEPKMALAEKMPYTRAVIQ (0) exon 3
EIARMRPTLPLSVPHCTTQDTMVMGYKIPKDTIVLTNIWGIHHDEKLWKNPYDFNPERHLDSNGNFV exon 4
KSSNIIQFNIGLRSCLGQQLAKMELFLLTTSLCRHFSFSVVGEVDMEGESMVTLRPCSMEVVATKRA* exon 4
DEV2228.x1 exon 1 supported by EST sequence
AL669345.1 exon 1 EST sequence
LQW149539.y1 exon 4 heme to end 
DEV34315.x1   
LQW229649.x1
DEV46839.x1
LQW229649.x1 exon 1
LQW149539.x1 exon 1
LQW224871.y1 exon 1 to mid
DEV46839.x1  exon 1
LQW18242.y1  exon 2
LQW277754.x1 exon 2
DEV46839.x1 exon 2
LQW224871.y1 exon 2 1 diff

>sequence 29 9 accessions 33% to 1A1 in a cluster with 65
MEEYGIINSIKVAVDTVILVGLAIYLTWHFWNKRTPGGAPGPRGLPFIGAITSIRKHPEHAMMKWNQQYG
PVCMVRLGFKDILLLGSYEAAHEALVKSPDFANRPPAHSIEVIAGGKGIVMIPFGPFHQEQRRFGLNALREH
GMGRRALEPTVHLCAQELCERIEEYGSKPFNLDNEVY
QSVSSIISRLVFGHDVVQENLEFRKMIFQMIEPNKLNILAGIL
AFAPYLKHLPFFSEIHRKNKEFRLKMESSIRKEIEEHMETRDRKEPRDYIDSFLNEMEK (?)
DEPNTKNEEWKQYSSFTQNQLIAM (0)
LQW220722.x1 exon 1
LQW220722.y1 C-term of seq 65 gene cluster
LQW162545.y1 exon 1
LQW202945.x1 exon 1
DEV48427.x1  exon 1
LQW72018.y1  exon 1
DEV21292.y1  exons 1, 2
GCiWno655_k19.b1 
GCiWno749_o22.b1
GCiWno178_l07.b1
GCiWno714_n01.g1 exon 1
GCiWno709_e10.b1 exon 1
GCiWno143_b11.g1 exon 1
GCiWno201_d17.g1 exon 1
GCiWno809_g22.g1 exon 1

>DEV21292.y1_5
RSPPTSNTSRSSAKFTEKTKNLD*KWSRRFVKK*KNIWRHVTERNHVTTSTVS*TKWKNQ
IKYQRQKV*TRTQKFQSQ*YVSTCPLSIVFITV*LI*YHHVCVTKNIAIRKNTYLKSKSC
QPKKHYVLSIFADFPTDISQLAISAMTPTDEDEPNTKNEEWKQYSSFTQNQLIAMVYFTY
IDVVVCLYV**NERTYSLFGVDIKX

>GCiWno655_k19.b1_1
LHRQFLKRNGKIKSSTKGRRYKRVHKNFSHNNMSVLAR*V*FLSLFN*YNTIMFL*QRTS
RLEKISI*SLKVANRKNITYCQYLPISRRIFHNSLF*Q*RLPTRTNRIQKTKNGNNIHLL
PRTNLLLWYTLLI*MLWYVCTCDEMKERIAYLVLT*SHPV*GMAKKCHQTTQNTALYLYN
NRLYMFVSASRLI*LYVFLYRVDYYHCR*TISKGGGGKKGXTXNT*YXE*X*XVFL*IKX
RVL*KVGRDXGFIN*FGMVFWFKXXMGKKNT*FEEKGGVIFXXKXIYKX
>GCiWno655_k19.b1_2
YIDSFLNEMEKSNQVPKAEGINAYTKISVTTICQYLPVKYSFYHFLINIIPSCFCDKEHR
D*KKYLFKV*KLPTEKTLRIVNICRFPDGYFTTRYFSNDAYRRGRTEYKKRRMETIFIFY
PGPTYCYGILYLYRCCGMFVRVMK*KNV*LIWC*HKATRYKEWLKNATKQHKTPPCIYII
TVYICLFQHRV*FNYTYFYTEWIITIVDRLLVKGGGERRGXX*IHNXXNRXDXCFYKLXK
GFCERWGGIXVL*IDLEWFFGLKXKWERRILNLRKKVVLFFXKXLYIN
>GCiWno655_k19.b1_3
TSTVS*TKWKNQIKYQRQKV*TRTQKFQSQQYVSTCPLSIVFITF*LI*YHHVFVTKNIA
IRKNIYLKSKSCQPKKHYVLSIFADFPTDISQLAILAMTPTDEDEPNTKNEEWKQYSSFT
QDQLIAMVYFTYIDVVVCLYV**NERTYSLFGVDIKPPGIRNG*KMPPNNTKHRPVSI**
PSIYVCFSIAFDLTIRIFIQSGLLPLSIDY**RGGGKEGXXXKYIIXRIGXIXVFIN*XK
GFVKGGEGXGFYKLIWNGFLV*KXNGKEEYLI*GKRWCYFXXKXYI*

>GCiWno495_k23.b1 CHROMAT_FILE: GCiWno495_k23.b1 PHD_FILE: GCiWno495_k23.b1.phd.1
           CHEM: term DYE: big TIME: Tue Oct 16 10:59:14 2001
           TEMPLATE: GCiWno495_k23 DIRECTION: fwd
          Length = 869

 Score =  121 bits (300), Expect = 2e-27
 Identities = 62/65 (95%), Positives = 62/65 (95%), Gaps = 3/65 (4%)
 Frame = +2

Query: 1   NERTYSLFGVDIKPPGIRNG-KMPPNNTKHRPVSI--PSIYVCFSIAFDLTIRIFIQSGL 57
           NERTYSLFGVDIKPPGIRNG KMPPNNTKHRPVSI  PSIYVCFSIAFDLTIRIFIQSGL
Sbjct: 113 NERTYSLFGVDIKPPGIRNG*KMPPNNTKHRPVSI**PSIYVCFSIAFDLTIRIFIQSGL 292

Query: 58  LPLSI 62
           LPLSI
Sbjct: 293 LPLSI 307

>GCiWno495_k23.b1_1
RIQKRKMETIFIFYPGPTYCYGILYLYRCCGMFVRVMK*KNV*LIWC*HKATRYKEWLKN
ATKQHKTPPCIYIITVYICLFQHRV*FNYTYFYTEWIITIVDSTI**XVGXDGTP*IHNM
RID*S*HKQLTTGCERTRGVGSITH*MSMCYYLM*IYSYSTDG*IIIFHTTIAVYMLPV*
RLRGYCYNQRILNGLPNVLSFHKSVNTRKK**LSKKNT*KLLDSHEVQNTAVVITTHTSR
PCLDIKSLKHGYTLMDATLSPGC*KTTLKTRLTMPLKKMGRLLGSIEYPP
>GCiWno495_k23.b1_2
EYKNEKWKQYSSFTQDQLIAMVYFTYIDVVVCLYV**NERTYSLFGVDIKPPGIRNG*KM
PPNNTKHRPVSI**PSIYVCFSIAFDLTIRIFIQSGLLPLSIVLYSXGWGXMGHLRYIIC
E*TDRDINS*QRAVKELEESVL*PIECPCATI*CEYIHILLMGESLYSTLLLLSICYRSR
GSEAIVTTNGFLMVCPMYYPSISLSIHARNNDYPKRIRENS*IPTRCRTPLLL*QPILPG
HAWI*KVSNMDIL*WMQHYHLVVERLHLKPVLPCL*KKWGDYWDLLSIPX
>GCiWno495_k23.b1_3
NTKTKNGNNIHLLPRTNLLLWYTLLI*MLWYVCTCDEMKERIAYLVLT*SHPV*GMAKKC
HQTTQNTALYLYNNRLYMFVSASRLI*LYVFLYRVDYYHCR*YYIVXGGEXWDTLDT*YA
NRLIVT*TVNNGL*KNSRSRFYNPLNVHVLLSDVNIFIFY*WVNHYIPHYYCCLYVTGLE
AQRLLLQPTDS*WSAQCIILP*VCQYTQEIMTIQKEYVKTLRFPRGAEHRCCYNNPYFPA
MLGYKKSQTWIYSDGCNIITWLLKDYT*NPSYHAFEKNGAIIGIY*VSP

>GCiWno47_e18.g1_1
XVSLAHW*RIGXSVPMVKIKSSTKGRRYKRVHKNFSHNNMSVLAR*V*FLSLFN*YNTIM
FV*QRTSRLEKIPI*SLKVANRKNITYCQYLPISRRIFHNSLFQQ*HLPTRTNGIQKTKN
GNNIHLLPRTNLLLWYTLLI*MLWYVCTCDEMKERI*LIWC*HKATRYKEWLKNATKQHK
TPPCIYNNRLYMFVSASRLI*LYVFLYRVDYYHCR*YYIVRXXHSPPLYHHLHLSNAPHL
PSIISPFLTSPHPLSKPSHTPIHIPAHLLLPPAHPHHRTYSTTLPLPPPPTVTHPSHLVP
LTTPLRALPPLPPTPVLSPQ
>GCiWno47_e18.g1_2
L*V*HIGNALXXRYPW*KSNQVPKAEGINAYTKISVTIICQYLPVKYSFYHCLINIIPSC
LCDKEHRD*KKYLFKV*KLPTEKTLRIVNICRFPDGYFTTRYFSSDTYRRGRTEYKKRRM
ETIFIFYPGPTYCYGILYLYRCCGMFVRVMK*KNVYSLFGVDIKPPGIRNG*KMPPNNTK
HRPVSIITVYICLFQHRV*FNYTYFYTEWIITIVDSTI*YAPXTPXPSITTYTFQTPPTF
PLSSPPFLLPHIHSLSPPTHPSTFPPISYSPLHTRITALTQQHFLSRPPPPSPTHLTSYL
LLHHSAHSPLSRLLPSSHL
>GCiWno47_e18.g1_3
CKFSTLVTHWXLGTHGKNQIKYQRQKV*TRTQKFQSQ*YVSTCPLSIVFITV*LI*YHHV
CVTKNIAIRKNTYLKSKSCQPKKHYVLSIFADFPTDISQLAISAVTPTDEDERNTKNEEW
KQYSSFTQDQLIAMVYFTYIDVVVCLYV**NERTYIAYLVLT*SHPV*GMAKKCHQTTQN
TALYL**PSIYVCFSIAFDLTIRIFIQSGLLPLSIVLYSTXPPLPXPLSPLTPFKRPPPS
LYHLPLSYFPTSTL*ALPHTHPHSRPSPTPPCTPASPHLLNNTSSPAPPHRHPPISPRTS
YYTTPRTPPSPAYSRPLTS

>sequence 2,3,9,44, 45 COMPLETE 81 accessions 94% to sequence 1 40% to 2U1
MVLQLLSDINVSSLVIFFTAFLALYYWYTRPKNFPPGPRGVPFLGVIPFLGNYPERVMRKWSKKYGPVMSVRMG
REDWVVLGDYETIQQ (0)
SLVKQGQCFSGRPDVPVLNQITNGHGLITVDYNEDWKTQRRFGITTLRG (2)
FGVGKRSMEDRIVEEVAYLNDAIRSHNEKPFDIL (0)
SILSNAVSNNICSVVMGRRFDYDDKRFMEIMARLSRS (2)
FNDPTANFALNVVMFMPILVKIPPFSRINNQLMTDVRVI (1)
LQMLREILSEHKSTFNKDDVRDFIDAFIAEQNSESKHSSYT (0)
DLQLLQYVRDLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVI (1)
GQDRVPAMNDKAQMPYTCAFMQEVFRYRTLVPLSVVHMTNQDVVLNGYTIPKGTT (0)
ISPNLWAVHNNPDVWDEPSKFKPERHLDDKGNFVQSKHVIPFSIGPRHCLGEQLARMEYFIYLVSMV
QKFEFFPDPNEPDLPDVEDGSSGVVFVPLRFKQIAKIV*
rciad81k12 EST 
rcieg32b06 EST  = AV862083
rciad45g08 EST 
rciad44e10 EST 
rciad47d10 EST 
DEV16203.x1  
DEV25023.x01 DEV25023.x1 = SEQ 44
DEV25395.x1 small deletion 8aa
DEV36142.x1  
DEV36161.y1 DEV36161.x1 = SEQ 1
DEV43341.y1 DEV43341.x1 = SEQ 9 THIS MAY BE N-TERM
DEV46240.y1 DEV46240.x1 = SEQ 1
DEV6477.x1   
DEV8789.x1  DEV8789.y1 = SEQ 9
DEV9515.y1  DEV9515.x1 = SEQ 1
LQW12658.y1 
LQW132813.x1 
LQW156838.x1 
LQW164355.y1 LQW164355.x1 = SEQ 9
LQW176676.y1 
LQW188497.y1 
LQW189083.y1 LQW189083.x1 = SEQ 9
LQW193177.y1 
LQW198468.x1 LQW198468.y1 = SEQ 1
LQW206936.y1 
LQW210436.x1 LQW210436.y1 = SEQ 9
LQW211598.x1 
LQW212168.x1 
LQW21261.y1  
LQW224972.x1 
LQW227602.x1 LQW227602.y1 = SEQ 1
LQW228810.x1 
LQW229022.y1 
LQW231535.y1 
LQW232410.y1 
LQW234563.x1 
LQW249118.y1 LQW249118.x1 = SEQ 9
LQW25924.x1  
LQW265547.y1 
LQW268100.x1 
LQW272015.x1 
LQW278692.y1 
LQW35104.x1 WXXP TO HEME
LQW9894.x1   
DEV13827.x01 note: DEV13827.y1 = seq 1 may be opposite end of gene
DEV13827.x1  
DEV16357.y1  
DEV1636.x1 
DEV17399.x1 15 aa deletion after TIQQ
DEV19053.y1 
DEV24912.y1 
DEV25110.x01 
DEV25110.x9 
DEV25829.y1 
DEV30184.x1 
DEV34783.x1  DELETION OF SHNEKPFDIL
DEV35744.x1 
DEV36429.x1 
DEV39712.y1  
DEV43341.x1  
DEV48144.y1 
DEV50104.y1 
DEV8789.y1 
LGK545.y1    
LQW103513.y1
LQW151967.y1
LQW164355.x1 
LQW182856.y1
LQW184127.x1
LQW188756.x2 OPPOSITE END IN SEQ 1
LQW189083.x1
LQW210436.y1
LQW214090.y1
LQW21815.y1  
LQW221848.y1
LQW226594.x1 HEME
LQW226690.y1
LQW236384.y1
LQW249118.x1
LQW258179.x1 
LQW36428.x1 
LQW41750.x1 
LQW60970.x1 
LQW65773.x1 
LQW8464.x1 
LQW89091.y1 
LQW96601.y1 

>CIONA SAVIGNYI SEQUENCE 71% TO CIONA INTESTINALIS seq 2 70% TO SEQ 4
This sequence carefully checked for contigiuity between exons
This sequence is not hybrid between multiple genes
MLQRMLNEINVSTSFIFLTVFLGLYYWYRRPKNFPPGPRGIPFLGVLPFLGNYPERKMRK
WSNKYGPVMSVRMGRQDWVVLGDHETIQQ (0)
GLVKHGNAFSGRPSIATIDQITEGHGVLFIDYNDHWKRQRRFGLSTLRG (2)
FGVGKRSMEDRITEEVAYLNDAIRTHDGKAFDIQ (0)
SILSNAVSNNICSIVMGRRFDYDDERFKEIMGRLARG (2)
FNDPEASFVLQILIFMPALINFPYFSRINGELMEDVRVI (1)
PELLREIVEEHKASYEQDNHRDFIDAFLGEQKAENGAKTFT (0)
DTQLLQYVRDLFVAGTETTTSTVRWSLLCLIHNPETQEKLRKEIFEVL (1)
GPEKIPAFENKSKMPYTSAFIQEIYRYRTLVPLSVTHMTNEDAHISGYTIPKGTT (0)
IAPNLWAVHNDPEEWDEPNKFKPERHLDAGGNFVQLKHVIPFSVGPRHCLGEQLARMEVF 
IFLVSLVQKFEFLPDPKATVLPDIENGASGAAYVPLPFKIVAKVV*

Accession                            length (datafile) exon #
G126P600183F.T0/G126P600183FG2.T0.seq   711  (13) exon 1 
G126P69914R.T0/G126P69914RA5.T0.seq     727  (10) exon 1 
G126P600628R.T0/G126P600628RB7.T0.seq   710  (08) exon 1 walked to exon 2
G126P616258F.T0/G126P616258FG2.T0.seq   675  (37) exon 2 
G126P606888F.T0/G126P606888FD6.T0.seq   758  (25) exon 2 
G126P69517R.T0/G126P69517RE7.T0.seq     708  (12) exon 3 
G126P64550R.T0/G126P64550RF9.T0.seq     795  (00) exon 4 
G126P64980F.T0/G126P64980FE12.T0.seq    726  (03) exon 4, 5
G126P600445F.T0/G126P600445FB7.T0.seq   711  (08) exon 4
G126P601719R.T0/G126P601719RH9.T0.seq   739  (13) exon 4
G126P602293R.T0/G126P602293RE9.T0.seq   739  (13) exon 4
G126P611387R.T0/G126P611387RG7.T0.seq   717  (25) exon 4, 5
G126P67490R.T0/G126P67490RD8.T0.seq     731  (04) exon 4, 5, 6
G126P68083F.T0/G126P68083FC9.T0.seq     731  (07) exon 4, 5, 6
G126P64682R.T0/G126P64682RH9.T0.seq     733  (02) exon 6, 7
G126P69523R.T0/G126P69523RG9.T0.seq     733  (??) exon 6, 7
G126P69883F.T0/G126P69883FD3.T0.seq     738  (10) exon 8, 9
G126P609473F.T0/G126P609473FC2.T0.seq   761  (24) exon 8, 9
G126P606736F.T0/G126P606736FH9.T0.seq   692  (20) exon 8, 9
G126P611477F.T0/G126P611477FF12.T0.seq  950  (41) exon 9 

>Second savignyi whole gene ortholog to seq 2/4
Checked for contiguity between exons not a hybrid gene
68% to seq 2 and seq 3, 78% to first savignyi ortholog of seq 2/4
MLQRVFNEINVSTGFVVLTVFLALYYWYRRPKNYPPGPRGIPFLGVLPFLGNYAERTMHK
WSKKYGPVMSVRMGRQDWVFLGDHETIRQ (0)
ALVNQGNSFSGRPLIATLDQITEGHGIVLLDYGDWWKRQRSFGFSTLRG (2)
FGVGKRSMEDRITEEVAYLNDAIRSHDGKAFDIK (0)
SILSNAVSNNISSIVMGRRFEYDDEHSKEIMARLAMG (2)
FNDPDTSFFLQILIFMPACVHLPYFSRVNKKLMEDVHVTR (1)
SELLREIIAEHKASYDQDNHRDFIDAFLGEHNAENGTDAFT (0)
DKQLLHYVRDLFFAGSETSTSTLRWTLLCLIHHPEKQEKLRKEIFEVL (1)
GQEKIPAVDNKAYMPYTCAFMQEVYRYRTLAPFGVAHMTNEDVNLNGYSIPNGTT (0)
IYVNLWAVHNNPDVWDEPNKFKPERHLDDKGNFVQSNHVIPFSVGPRHCLGEQLARMEIFIYL
VSLVQKFEFLPDPDATELPDIENGSYGPICAPKPFKMVAREV*

G126P66001F.T0/G126P66001FD9.T0.seq    747   (07) exon 1, 2
G126P600523F.T0/G126P600523FG11.T0.seq 708   (08) exon 2, 3
G126P600643F.T0/G126P600643FC9.T0.seq  725   (09) exon 2, 3 
G126P69906R.T0/G126P69906RE4.T0.seq    969   (12) exon 3 walked from RE4 to FC8
G126P605356F.T0/G126P605356FF5.T0.seq  762   (20) exon 4
G126P69993F.T0/G126P69993FC8.T0.seq    717   (09) exon 4, 5 intron 3-4 = 1600bp
G126P603029R.T0/G126P603029RF12.T0.seq  943  (15) exon 4, 5
G126P603996F.T0/G126P603996FA6.T0.seq   739  (15) exon 5, 6
G126P66969R.T0/G126P66969RF11.T0.seq    710  (03) exon 6 walked to exon 7
G126P66256F.T0/G126P66256FC11.T0.seq    964  (05) exon 7
G126P604570R.T0/G126P604570RD6.T0.seq    735 (14) exon 7, 8
G126P604249F.T0/G126P604249FC7.T0.seq    711 (16) exon 7, 8
G126P612840R.T0/G126P612840RC1.T0.seq    711 (29) exon 7, 8
G126P612199R.T0/G126P612199RD4.T0.seq    742 (32) exon 7, 8 walked to exon 9
G126P607416R.T0/G126P607416RF5.T0.seq    731 (21) exon 9
G126P608773F.T0/G126P608773FA7.T0.seq    728 (23) exon 9
G126P608264R.T0/G126P608264RF7.T0.seq    993 (24) exon 9

>related savignyi 2/4 like exon sequences (probably two more closely related genes)
TLVKQGSIFSGRPSIPILEEMTKGHGILLLDYGEKWKSQRKFGLMTLRG (2)
GLVKQGTAFSGRPSIDIIERVSKGNGMIFLNYDEHWKKQRRFGLSTLRG (2) = RB10
FGVGKRSMEDRITEEVAYLNDAIRTHDGKAFNIQ (0) = RB10
SILGNAISNNICSIVMGRRFDYDDERFKEIITRLARR (2)
FNDPEVSLVRQILIFMPALVNAPYFSRINAELMENVRVI (1)
FIDPEVSSALQIFVFMPALVNFPYFSRIYGELMKDVRVI (1)
PESLREMVEEHKASYEQDNHRDFIDAFLGEQKAENGAKTFT (0)
SELLREIVADHKALYDQDNHRDFIDAFLGEQKSENGSETFT (0)
DMQLLHYVRDLFVAGTETTTSTLRWSLLCLIHDPEIQDKLRKEIFEVL (1)
GQEKIPAFEDKSKMPYTRAFIQEIYRHRTLLPLSVTHMTNEDANICGYTIQKGTT (0)
ISSNLWAVHNDPDVWNEPSKFKPERHLDDKGNFVQSSHVIPFSVGPRHCLGEQLARME
VFIYLVSLVQKFEFLPDPDATELPDIKIGSNGPAYVPLPFNMVARVV*
IAPNLWAVHNDPVVWDEPNKFKPERHLDADGNFVQLKHVIPFSVGPRHCLGEQLARMEVF
IFLVSLVQKFEFLPDPKAKVLSDNENGASGAAYVPLPFKIVAKVV

G126P61537F.T0/G126P61537FD1.T0.seq    721    (00) exon 1
G126P64657R.T0/G126P64657RH5.T0.seq    766    (01) exon 1, 2
G126P69683F.T0/G126P69683FC11.T0.seq    762  (08) exon 2 
G126P65262R.T0/G126P65262RC7.T0.seq     736  (07) exon 2 
G126P68944R.T0/G126P68944RB10.T0.seq    738  (09) exon 3 
G126P64729R.T0/G126P64729RG12.T0.seq    725  (00) exon 3, 4 
G126P608695R.T0/G126P608695RC1.T0.seq   731  (21) exon 5 partial
G126P612819R.T0/G126P612819RB12.T0.seq  726  (30) exon 4, 5
G126P65190R.T0/G126P65190RF6.T0.seq     753  (03) exon 5, 6
G126P67778F.T0/G126P67778FG5.T0.seq     719  (05) exon 6
G126P607271F.T0/G126P607271FG11.T0.seq  775  (20) exon 6, 7
G126P609438F.T0/G126P609438FB4.T0.seq   709  (22) exon 7
G126P64695R.T0/G126P64695RH10.T0.seq    752  (01) exon 8, 9
G126P601373R.T0/G126P601373RB4.T0.seq   705  (09) exon 9

>sequence 4, 8, 92  (48 accessions)  83% to sequence 2, 38% to 2U1, 2R1, 2D6
faces away from seq 220 on same clone
note the end of seq 4 is identical to the end of seq 1
MLQHLLGDINVSSLVIFFTAFLALYYWYTRPKNFPPGPRGVPFLGVIPFLGNY
PERVMRKWSKKYGPVMSVRMGREDWVILNDYENIQK (0)
ALVKQGHSFSGRPDIPVFTQINNGMGLLTVDYNDHWKMQRRFGITTLRG (2)
FGVGKRSMEDRIVEEVAYLNDAIRSHNDKPFDIL (0)
GVLSNAVSNNICSIVMGRRFDYDDERYKEIMFRLSRS (2)
TKDPEANFYITVLMFVPFLVNFPPFSRINKEMMDDVKVILG (1)
DHLDEIVSEHKSTFNKDDARDFIDAFIAEKNSQNKHSSFT (0)
DSQLLHYVVDLFEAGTETTTSTLMWSILCMIHNPEKQEKLRKEICSVV (1)
GQDRVPAMNDKAQMPYTCAFMQEVFRYRTLVPLSLMHMTNEDVVLNGYNIPKGTT (0) 
VSPNLWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSKHVVAFSVGPRHCLG
EQLARMEYFIYLVSMVQKFEFLPDPNEPNLPDIEKGSNGAAFVPLPFKQIARVV*
DEV19056.x1   exon  1
LQW246757.y1  exons 1, 2
LQW195694.x1  exons 1, 2
LQW41553.y1   exons 1, 2
DEV29656.x1   exons 1, 2
LQW242270.y1  exons 1, 2, 3, 4 OPPOSITE END = SEQ 220 (GENE CLUSTER?)
LQW188756.x2  exons 3, 4
DEV55352.x1   exon  4
LQW252475.y1  exons 5, 6 opposite end .x1 = seq 220 (- strand)
LQW36797.x1   exons 5, 6
LQW263538.y1  exons 5, 6, 7
LQW26095.x1   exons 5, 6, 7, 8
LQW269368.y1  exons 5, 6, 7, 8
DEV40081.y1   exons 6, 7, 8
DEV29656.y1   exons 7, 8
LQW221848.x1  exon  8
LQW174458.x2  exon  8
LQW111344.x01 exon  8
LQW60970.y1   exon  8
LQW8752.x1    exon  8
LQW246757.x1  exon  8
LQW145059.x1  exon  8
LQW145059.x2  exon  8
LQW187803.y1  exon  8
LQW103513.x1  exon  8
DEV37657.y1   exon  8
DEV37657.y2   exon  8
DEV39543.y1   exon  8
LQW224972.x1  exon  8
LQW212168.x1  exon  8
LQW46430.x1   exon  8
DEV9515.y1    exon  8
LQW259311.x2  exon  9
LQW259311.x1  exon  9
DEV36161.x1   exon  9
DEV46240.x1   exon  9
LQW95486.y1   exon  9
LQW258179.y1  exon  9
DEV9515.x1    exon  9
LQW146181.y1  exon  9
LQW227602.y1  exon  9
LQW198468.y1  exon  9
LQW183999.y1  exon  9
DEV13827.y1   exon  9
LQW188756.y1  exon  9
DEV39712.x1   exon  9
DEV19056.y1   exon  9
DEV5183.x01   exon  9

>SEQUENCE 211 94% to seq 4, 4 diffs probably = seq 4
opposite end = seq 2
689 PERHLDDQGTFVQSKHVVAFSVGPRHCLGEPLARMEYLIYLVSMVQKFEFLPDPNEPNLP 510
509 DIEKGSNGAAFVPLP 465
LQW211598.y1 HEME

>SEQUENCE 27, 28, 220 SIMILAR TO SEQ 2 and seq 8 BUT NOT SAME SEQ
Faces away from seq 8 on same clone
There appear to be at least two and maybe three closely related sequences
MLTNLIANPSISPVLAILSCVIAFYYWYKRPKNMPPGPRGIPFLGIIPFVGMN
PEQAFMQWSKKYGPVITVRMGRKDWVVLCDHDTIHQ (0)
VLVKQSTVCSGRPKIPIVSELSKGHGILFADYCEKWKSQRKFGMKTLRE (2) 
FGVGKKCTEDRVLEEVDFLCNEIRSKNGKPFDIQ (0)
DIMCNAVSNIIMNIVIGRRCNYDENFFTDVISRFTKW (2) 
FNDPTAGAMFTGMMFLPQLKYVPPFSKYYKIFRDDIGALH (1) 
EFFEEVIKEHEKNFDGNNLRDFIDAFLLEMKKNESGSEFT (0)
YIQLLNYIRDLFDGGTETTVSTSRWAILCMLHYPETQKKLRNEIMTII (1)
GPNTPASMSHKSDMPYTCAFIQEVLRFRTLVPLSVPHKVNEDATVNGYTIPKGVT (0)
VSPNLWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSNHVIPFSVGPRHCLGEQLARMEIFIFL
ISMVQKFEFLPDPNEPDLPEINHGTNGAAFVPLPYKIVANQI*
LQW219274.y1 upstream of exon 6 opp end = exon 1
DEV10453.x1  exon 1
LQW219274.x1 exon 1
LQW242270.x1 exon 1 opposite end .y1 = seq 4
LQW252475.x1 exon 1 plus 711 bp upstream
LQW275290.x1 exon 2
LQW195694.y1 exon 2 opposite end .x1 = seq 4
LQW212515.y1 exon 2, 3, 4
LQW211000.y1 exon 3, 4
LQW173295.y1 exon 3, 4
DEV3674.y1   exon 3, 4
LQW275290.y1 exon 6, 7 2 aa diffs I-HELIX
DEV23276.x1  exon 6 2 
DEV10453.y1  exon 6 2 
LQW212515.x1 exon 7, 8 
LQW268927.y1 exon 7, 8
LQW173295.x1 exon 8
DEV3674.x1   exon 9 
LQW211000.x1 exon 8 
DEV21239.y1  exon 9 one diff with 18, 23, 27, 55
DEV40662.y1

>sequence 42, 59, 218 36% TO 2U1 Fugu
MLSLFFSSVSIFFRCFSFLFNSWTLTFATSVLLLLVIMDKTD
KKMPGSPPGPRGLPILGMLPFMMSYPERLMADWSKKHGPVIM (0)
VKMGPKNVVILGSSDAAHAAFVKNTHLANRPQDGLEIFAGGKGILFINS
SMFHSEQRRFCLSALREFGMGRRTLEPKIVDCAALLCDQIDDVCGHDVST (1)
GPIQIEQMIYVTMSNVISHLVFGHDSLNDNKGLCELLLRTIEPNKYNALAGILMFLP
SLKNVPPFSTTTRRAIEFREDLHRYIKMEIDRHRASRDPNQPRDFIDKFLNEIEKIKVRHNSNNNNNNNLILNNNVK (1)
GSKSRRKIAGASFSEDQLIPLVRDLFMAGTDTSSTTITWVVIFLASFPDVQTRLHEELDSVLGQNRTPSVSMEDKMPYMRAVIQ (0)
ETFRMRPPLPLSVPHVAQCNTTLMGYRVPKDSIILTNTWGIQNNPKFWVDPDTFKPQRHIDDLGKFIKSPNVI
PFNIGSRNCLGQQLAKMELFITIASLCRRFWFTLPTGETPDLKGESTFILRPFPFNVVATKRV*
DEV45222.y1    exon 1
LQW242739.x1   exon 1
LQW242739.x2   exon 1
LQW131160.y1   exon 1
LQW33948.y1    exon 1
LQW135435.y1   exon 1
DEV15725.y2    exon 1
DEV15725.y1    exons 1, 2
LQW185195.y1   exons 1, 2
AV963814.1 EST exons 2, 3
AV963844.1 EST exons 2, 3
AV957999.1 EST exons 2, 3
LQW181338.x1   exon 3
LQW181338.x3   exon 3
LQW74897.y1    exon 3
LQW158751.y1   exon 3
DEV35314.x1    exon 3
DEV35314.x4    exon 3
AV852807.1 EST exon 4
DEV57124.y1    exon 4
LQW47584.x1    exon 4
LQW167366.x1   exon 4   2 diffs
LQW32310.x1    exon 4
DEV29829.x1    exons 4, 5
LQW33948.x1    exons 4, 5 
DEV50829.x1    exons 4, 5
LQW131920.x1   exon 5
LQW185195.x1   exon 5
LQW220705.x1   exon 5
DEV45222.x1    exon 5

>sequence 5 4 accessions  to sequence 1 PKG to heme 42% TO 2R1
VLTNIWRVHNNQNVWKNPHEFRPDRHLDSNGNFVSSNNVIPFACGYRRCLGEQIAKAE
IFLFIVNIVKRFHLVVDQVTGPPTLEKDPKGAVNTPAPF
LQW185918.x1 
DEV58821.x2  
DEV58821.x1  
LQW152115.x1 PERF TO END
LQW228498.x1 HEME 2 DIFFS
GCiWno174_g15.g1

>GCiWno174_g15.g1
NTTTATGCCTGGNCNCAGAGGATGCAAAATTGCGTGTCTACTGGAACACTGTGTATGATCATGGACTGATGCCTTCTTAT
AATATTATCTGCTATGAGCTGTATTTATTTATTAAAAGCTGTATTTTTGTAGCAAAAGTGTGTAAGTAAAGCAGGATTAT
ATATAGATATGAAACTGTTTAAAACGTGTGCTTAACAAATTGTGCTGTCAGTTTTTTCTCGCTCGAACGCTGAAACGAAA
AGGTGCTGGCGTGTTCACGGCTCCCTTAGGATCTTTTTCCAACGTCGGCGGACCGGTTACTTGATCCACCACCAAGTGAA
ACCGTTTGACAATATTTACTATAAAAAGAAATATCTCTGCTTTGGCTATTTGCTCGCCCAAACAACGCCTATAACCACAT
GCAAAAGGAATGACGTTGTTAGATGAGACGAAATTGCCGTTGCTGTCAAGATGACGATCGGGTCGAAACTCGTGTGGATT
TTTCCAAACATTTTGATTATTGTGGACCCTCCAAATGTTGGTAAATACCTATATGTTAGAATTAAGCACAAAACGTACAT
GTTATACTTTATTATATATATCATTATTAATGTAACTTATTTATCCTAGCCTGACAGGGCAACGCCAGTCTCCAAAACAG
AGGCGTTCTGTCCTACATATCATGTCCGCTTATACGAGTTACCACTTATATAACTTCATAGGCGATTTTTTTGGTTATTT
TTGTTCAACGTCTGGCTGCCAATTTAGACGACCACATAAGGTAGACCCATATGGGCTGATGTGTGCTGATTGACCAATGT
ACTTACTGGAGTATCTTTAGGAATGTCATAACCGGACCATGGCACGCTTCCAACAGTTCGATGAAGCAGATTCCCCGTGG
CAATGGGATCGTGCCGGTGTTTTTCTTGTATAAACCAACG

>GCiWno174_g15.g1_4
LVYTRKTPARSHCHGESASSNCWKRAMVRL*HS*RYSSKYIGQSAHISPYGSTLCGRLNW
QPDVEQK*PKKSPMKLYKW*LV*ADMICRTERLCFGDWRCPVRLG*ISYINNDIYNKV*H
VRFVLNSNI*VFTNIWRVHNNQNVWKNPHEFRPDRHLDSNGNFVSSNNVIPFACGYRRCL
GEQIAKAEIFLFIVNIVKRFHLVVDQVTGPPTLEKDPKGAVNTPAPFRFSVRARKN*QHN
LLSTRFKQFHIYI*SCFTYTLLLQKYSF**INTAHSR*YYKKASVHDHTQCSSRHAILHP
LXPGIX
>GCiWno174_g15.g1_5
VGLYKKNTGTIPLPRGICFIELLEACHGPVMTFLKILQ*VHWSISTHQPIWVYLMWSSKL
AARR*TKITKKIAYEVI*VVTRISGHDM*DRTPLFWRLALPCQARINKLH***YI**SIT
CTFCA*F*HIGIYQHLEGPQ*SKCLEKSTRVSTRSSS*QQRQFRLI*QRHSFCMWL*ALF
GRANSQSRDISFYSKYCQTVSLGGGSSNRSADVGKRS*GSREHASTFSFQRSSEKKLTAQ
FVKHTF*TVSYLYIILLYLHTFATKIQLLINKYSS*QIIL*EGISP*SYTVFQ*TRNFAS
SXXRHKX
>GCiWno174_g15.g1_6
RWFIQEKHRHDPIATGNLLHRTVGSVPWSGYDIPKDTPVSTLVNQHTSAHMGLPYVVV*I
GSQTLNKNNQKNRL*SYISGNSYKRT*YVGQNASVLETGVALSG*DK*VTLIMIYIIKYN
MYVLCLILTYRYLPTFGGSTIIKMFGKIHTSFDPIVILTATAISSHLTTSFLLHVVIGVV
WASK*PKQRYFFL**ILSNGFTWWWIK*PVRRRWKKILREP*TRQHLFVSAFEREKTDST
IC*AHVLNSFISIYNPALLTHFCYKNTAFNK*IQLIADNIIRRHQSMIIHSVPVDTQFCI
LXXQA*X


>sequence 7, 100, 101  complete 19 accessions 36% to 2J2, 36% to 2Y1
MLDYLTFTNLALFAIALLLFYIWLTPKYKNLPPGPMGVPFLGCLPFMETLAERTFTKWSKKYGPI
ITVQLGDHRTVILNSYEAIEE (0)
AFIKKGEKFNGRFKTYFTEFASEGLGMVFIDGEKWKEHRKFGTRALAG (2)
AGMYGKTIEQRVLEEAENICHVIRSKNEEPFILE (0)
DDLILSVANVINGITIRERCDEEGNENLLKYAAIVVEG (2)
FRKDGLIYSLLSVIPWCRFFPQTQKHIKSLKDGLKAGNGKTF (1) agt
TLFDNLIEQHQQQHDRLHPRDLIDLYLNQMKDFS (0)
KPQLRYFLKDLFAAGTETSSSTIRWALFYLIVNPDIQDKVHKEIDDVI (1)
GHNGVVRYDTKLPYTKAVLQETYRIRTATPLGVPRRNTEDVTLMGYFIPKNTQ (0)
IIPNLWWVHNDPEYWNEPDVFKPERHLDEEGNLIMSNRVIPFSIGARHCLGENLARTEIFL
FLVSILQKFTVLPNPEDPNPPLECSPGIVNSPHKYPLIMKER*
AV956864 EST exons 1, 2, 3, 4 and part of 5
LQW15076.y1  exons 4, 5
DEV13161.x01 exon 5
LQW241946.y2 exon 5
LQW148541.y1 exon 5
DEV38450.x1 C-helix
LQW169782.x1 
LQW189302.y1 
LQW189302.x1 N-TERM 
LQW211779.y1
LQW243977.y1
LQW243977.x1 mid
LQW247662.y1 
LQW247662.x1 C-helix
LQW155205.x1 C-helix
LQW266480.y1 
LQW70591.x1 
LQW70591.y1 C-helix
LQW70591.y2 C-helix
LQW208910.x1
DEV43834.y1 N-TERM
DEV8515.y1
LQW145047.y2 C-helix
LQW25145.x1 mid
GCiWno946_o03.g1 ex 7
GCiWno41_m16.g1 ex 6


DFCRKEILEHKKNLDENEPGDYIDAFLVEMKKH LQW201878.x1 from a similar gene but not same gene

>cicl015f07_3 = seq 7
FTNLALFAIALLLFYIWLTPKYKNLPPGPMGVPFLGCLPFMETLAERTFTKWSKKYGPII
TVQLGDHRTVILNSYEAIEEAFTKKGEKFNGRFKTYFTEFASEGLGIFFIDGEKWKEHRK
FGTRALAGAGMYGKTIEQRVLEEAENICHVIRSKNEEPFILEDYLILSVANVINGITIKE
RCDEEGNENLLKYVASVVEGFRKDGLIYSLLSVIPWCR


>GCiWno946_o03.g1
TCGATTCGAGCTNCGGTACCCTTTAAGATTACTATATACAAAAGTTATTATTATAAAATAACATTTTAATATATTTATTA
TTAACACCATAACGTTATTCAATTTCTTTACAGAAACCACAACTACGTTATTTTTTAAAAGATCTTTTCGCTGCTGGAAC
CGAAACGAGCAGTAGCACAATACGTTGGGCGTTATTTTACCTCATTGTTAACCCTGATATTCAGGATAAAGTGCACAAGG
AAATAGACGATGTTATAGGTAAAATGGTATGGGAGTCATGGGACTGTATATTTAAATTGATTTTCGTTTGCAATCGTCAT
AACTTTGGGTTATTTCGTATTTACCAACATATATAGCAAATAAATATTAGTTGTTTTTTAATAACTTTTGATTATTTTTA
TAAATTACTTCTACCCTCTTACTCTTTTGTAACCGATTTGTGTATACGTCTATGCACAGTTTCTGCTTGAAATACTTATA
ACTTACCCCAATAAATACAACGTATTTCATTTACAAACAGGGCATAACGGAGTTGTTCGTTACGACACCAAACTACCATA
CACTAAAGCGGTCCTTCAAGAGACTTATAGAATACGAACAGCGACGCCTCTTGGCGTGCCAAGACGAAATACTGAGGATG
TTACATTGATGGGATACTTTATACCAAAGAACACTCAGGTATAATAATACATGATGCTATCCATATTTGAATACATGCAG
GTTTTAACTAGTTTTGATGTGGAAATCAGGTCTAAAACATATAGTACCGTCAGGGNTAAATGTAAACCGCTATATAGCAC
ATCAGTTCGTTAACAATTAAGTTCCATGTCGATTTAGATCATTCCNTAACCTTGGTGGGTCCACAACGACCCAGAGTATT
GGAACGAACCCCGACGTTTC
>_1
SIRAXVPFKITIYKSYYYKITF*YIYY*HHNVIQFLYRNHNYVIF*KIFSLLEPKRAVAQ
YVGRYFTSLLTLIFRIKCTRK*TML*VKWYGSHGTVYLN*FSFAIVITLGYFVFTNIYSK
*ILVVF**LLIIFINYFYPLTLL*PICVYVYAQFLLEILITYPNKYNVFHLQT GHNGVVR
YDTKLPYTKAVLQETYRIRTATPLGVPRRNTEDVTLMGYFIPKNTQV**YMMLSIFEYMQ
VLTSFDVEIRSKTYSTVRXKCKPLYSTSVR*QLSSMSI*IIP*PWWVHNDPEYWNEPRRF
>_2
RFELRYPLRLLYTKVIIIK*HFNIFIINTITLFNFFTETTTTLFFKRSFRCWNRNEQ*HN
TLGVILPHC*P*YSG*SAQGNRRCYR*NGMGVMGLYI*IDFRLQSS*LWVISYLPTYIAN
KY*LFFNNF*LFL*ITSTLLLFCNRFVYTSMHSFCLKYL*LTPINTTYFIYKQGITELFV
TTPNYHTLKRSFKRLIEYEQRRLLACQDEILRMLH*WDTLYQRTLRYNNT*CYPYLNTCR
F*LVLMWKSGLKHIVPSGXNVNRYIAHQFVNN*VPCRFRSFXNLGGSTTTQSIGTNPDV
>_3
DSSXGTL*DYYIQKLLL*NNILIYLLLTP*RYSISLQKPQLRYFLKDLFAAGTETSSSTI
RWALFYLIVNPDIQDKVHKEIDDVIGKMVWESWDCIFKLIFVCNRHNFGLFRIYQHI*QI
NISCFLITFDYFYKLLLPSYSFVTDLCIRLCTVSA*NTYNLPQ*IQRISFTNRA*RSCSL
RHQTTIH*SGPSRDL*NTNSDASWRAKTKY*GCYIDGILYTKEHSGIIIHDAIHI*IHAG
FN*F*CGNQV*NI*YRQG*M*TAI*HISSLTIKFHVDLDHSXTLVGPQRPRVLERTPTF

2N9 mid region 
8235 GEPFDPVPLLNNAVANIICQIVFGRRFDYTDHMFQRMLHHLTEMAYLEGSIWAL 8074 (0)
7991 LYDSFPALMKHLPGPHNGIFSSSSSLQ
GFIWREIQRHKSDLDPSNPRDYIDAFLIEEGNGN-NQLGFE
ALFDNLIEQHQQQHDRLHPRDLIDLYLNQMKDFSVSQLYFKIT

ERNLVLCCLDLFLAGSETTSKTLQWGLIYLIRKPHIQ 7606 (1)

>GCiWno41_m16.g1 CHROMAT_FILE: GCiWno41_m16.g1 PHD_FILE: GCiWno41_m16.g1.phd.1 CHEM:
           term DYE: big TIME: Sat Sep  1 11:02:18 2001 TEMPLATE:
           GCiWno41_m16 DIRECTION: rev
          Length = 868

 Score = 75.3 bits (182), Expect = 7e-14
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = -2

Query: 1   ALFDNLIEQHQQQHDRLHPRDLIDLYLNQMKDFS 34
           ALFDNLIEQHQQQHDRLHPRDLIDLYLNQMKDFS
Sbjct: 378 ALFDNLIEQHQQQHDRLHPRDLIDLYLNQMKDFS 277

>GCiWno41_m16.g1
TATTGTTATAATAATAAAGGTAATAAAATGTTATAATAAGAATAACTTTTGCATAGTAGGTTGGGGGAAGATGGGACACC
TTTTTATTTGATTTTCTCGTTCCATTTGGTAGTAAATAAAGATCCTCACGACTCACATAAACCGCAGTTAATTGGATATT
ATGTGCTAAAGGTGTCCCGATTTCCCCCACCCTACTATGTAATAACAAAGAAATTAAATGTTATAATAATAGTAATAACT
TTTGTATATAGTAATCTTAAAATACAGTTGACTTACAGAAAAGTCTTTCATTTGATTCAAATACAAATCAATCAGATCTC
TTGGGTGGAGACGGTCATGTTGTTGCTGGTGTTGTTCTATCAAGTTATCGAACAACGCTGCAATAATTATTACCATGAAA
TGAACGAACGAATGATGTAACTTATTGGCTCATCCTCGTATGATGGGCAAAATAATTGTAACACCGCTTACGAGTTACCA
CGCATGTGTCTTTGTAAGTAAAAACTTTTTTTATGTTTTTGTATTGTATTGCTAATTACTTAGAGTTTATAGACAACCCA
TAAGCAACCACTGGGTTGGAGCAAATGCCGTTAAGTTTCTTGCCCAAGAATACGCCCACAGTAGTGTAGCAACCACGAGC
CTTGAACCCGTAACATCTCGGTAAGAGGCAGGTTCAAATGCAGTTTAGCAAAAAGTATTGTATCCTATTTCATAAATCGC
TTATTTAGTAATTTACATTTTTCTCTTTAACTAAATGTTNTACCGTTTCCCGCTTTGAGTCCATCTTTCAGGCTTTTTAT
GTGTTTTTGAGTCTGCGGAAAGAATCGACACCAGGGAATAACCGACNNACACGAATAAATCAAACCAT

>_4
WFDLFVXVGYSLVSILSADSKTHKKPERWTQSGKRXNI*LKRKM*ITK*AIYEIGYNTFC
*TAFEPASYRDVTGSRLVVATLLWAYSWARNLTAFAPTQWLLMGCL*TLSN*QYNTKT*K
KFLLTKTHAW*LVSGVTIILPIIRG*ANKLHHSFVHFMVIIIAALFDNLIEQHQQQHDRL
HPRDLIDLYLNQMKDFSVSQLYFKITIYKSYYYYYNI*FLCYYIVGWGKSGHL*HIISN*
LRFM*VVRIFIYYQMERENQIKRCPIFPQPTMQKLFLL*HFITFIIITI
>_5
MV*FIRVXRLFPGVDSFRRLKNT*KA*KMDSKRETVXHLVKEKNVNY*ISDL*NRIQYFL
LNCI*TCLLPRCYGFKARGCYTTVGVFLGKKLNGICSNPVVAYGLSINSK*LAIQYKNIK
KVFTYKDTCVVTRKRCYNYFAHHTRMSQ*VTSFVRSFHGNNYCSVVR*LDRTTPATT*PS
PPKRSD*FVFESNERLFCKSTVF*DYYIQKLLLLL*HLISLLLHSRVGEIGTPLAHNIQL
TAVYVSREDLYLLPNGTRKSNKKVSHLPPTYYAKVILIITFYYLYYYNNX
>_6
GLIYSCXSVIPWCRFFPQTQKHIKSLKDGLKAGNGXTFS*REKCKLLNKRFMK*DTILFA
KLHLNLPLTEMLRVQGSWLLHYCGRILGQET*RHLLQPSGCLWVVYKL*VISNTIQKHKK
SFYLQRHMRGNS*AVLQLFCPSYEDEPISYIIRSFISW**LLQRCSIT**NNTSNNMTVS
TQEI*LICI*IK*KTFL*VNCILRLLYTKVITIIITFNFFVIT**GGGNRDTFST*YPIN
CGLCES*GSLFTTKWNEKIK*KGVPSSPNLLCKSYSYYNILLPLLL*QX

A related EST
>cits048p05
CGGCCGCTACTGCCTAAACTTGCTAGAAAGTATGGACCCATTTTCACTATTACAGCTGGGTATAGACGCGTGGTGTTTCT
TGTTGGCTATGACTTAATTAAAGAAGTTATCACTGACAGAGCAAAAGATTTTGCATCAAGATGTCCCAACATGCCAGGAA
GAATTGTCCGTGGAGAAGGTTTAGATGGCATTGCTGCAGCCCCATATGGTCCCAAATGGATGGCAAACCGTAAGTTCTTT
TACTCTGCCATGCGCACCATGGGGTTGGGAAAACGTGGGATAGAAAAGTGTGTGGTTGATGAGATTCCCTACATTGTTGA
AGAACTTGAGAAGCTTTGCACCAAAAATGAGTTGTTTGAACCATCGAGTGTATTTGACTCCGCTGTACTGAACGTGCTTG
CATATTTCACTTTTGGAAACAGATATTCCTATCAAGACGAAAAATTTAAAGAGCTGATTCACATCAATAATGATTTCTTT
CAAAAAGCAAAGTTTCTGAATCAGCCACTATTCTTCCTCCTCAGTTTGGTACCTGGCCTGCATAAATACTGGCTTCCTCA
ATGTGGAAAAGATCTAAAAGAATCAGTTGGGAAAATCAACAAATTTGTAAAAGCTGAGATTGAACAACATCGACAAAATT
TTGACCGCAAAAATCCAAGAGATTATATTGACTGTTATCTCAAAGAGCTCGATCAGATGAATGATCAAAGCGAACTATCG
G

RPLLPKLARKYGPIFTITAGYRRVVFLVGYDLIKEVITDRAKDFASRCPNMPGRIVRGEG
LDGIAAAPYGPKWMANRKFFYSAMRTMGLGKRGIEKCVVDEIPYIVEELEKLCTKNELFE
PSSVFDSAVLNVLAYFTFGNRYSYQDEKFKELIHINNDFFQKAKFLNQPLFFLLSLVPGL
HKYWLPQCGKDLKESVGKINKFVKAEIEQHRQNFDRKNPRDYIDCYLKELDQMNDQSELS


>GCiWno434_a04.g1 CHROMAT_FILE: GCiWno434_a04.g1 PHD_FILE: GCiWno434_a04.g1.phd.1
           CHEM: term DYE: big TIME: Thu Oct 11 12:43:00 2001
           TEMPLATE: GCiWno434_a04 DIRECTION: rev
          Length = 940

 Score = 91.7 bits (224), Expect = 8e-19
 Identities = 41/42 (97%), Positives = 42/42 (99%)
 Frame = +3

Query: 1   FRKDGLIYSLLSVIPWCRFFPQTQKHIKSLKDGLKAGNGKTF 42
           FRKDGLIYSLLSVIPWCRFFPQTQKH+KSLKDGLKAGNGKTF
Sbjct: 156 FRKDGLIYSLLSVIPWCRFFPQTQKHMKSLKDGLKAGNGKTF 281

>GCiWno434_a04.g1
TACGAATTCGAGCTCGTACCCTATTTTTTTAACGGTGTATTTATTTTCGTGCATGCGGTGTGAAAAATCGAATGTTAAAT
TCACCGAAAATATAGCATATGCTATGCCATGTAAAAATAGGAAATATTAAAGCTATCAATAATTTCCCAAACAGGTTCCG
GAAAGATGGTTTGATTTATTCGTTGCTGTCGGTTATTCCGTGGTGTCGATTCTTTCCGCAGACTCAAAAACACATGAAAA
GCCTGAAAGATGGACTCAAAGCGGGAAACGGTAAAACATTTAGTTGAAGAGAAGAATGTAAATTACGAAATAAACGATTT
ATGAAATAGGATACAATACTTTTTGCTAAACTGCATTTGAACCTGCCTCTTACCATGATGTTACGGGTTCAAGGCTCGTG
GTTGCTACACTATACTGTGGGCGTATTCTTGGGCAAGAAACTTAACGGCATTTGCTCCAACCCAGTGGTTGCTTATAGGT
TGTCTATAAACTCTAAGTAATTAGCAATACAATACAAAAACATAAAAAAAAGTTTTCACCTACAAAGACACATGTGTGGT
AACTCGTAAGCGGTGTTACAATTATTTTGCCCATCATACGAGGATGAGCCAATAAGTTACATCATTCGTTCGTTCATTTC
ATGGTAAAAATTATTGCAGCGTTGTTCGATAACTTGATAGAACAACACCAGCAACAACATGACCGTCTCCACCCAAGAGA
TCTGATTGATTTGTATTTGAATCAAATGAAAGACTTTTCTGNTAGTCAACTGTATTTTAAGATTACTATATACAAAAGTT
ATTACTATTATTATAATATTTAATTTCTTTGGTATACTGNANGGGTGGGGGGGGAAAATCGGGGAAACCTTTAGCACATA
ATATCCCATTAACTGCGGTCTATGTGAGTCGTTGAGGATCTTTATTTACTACCCAATGGN

>_1
YEFELVPYFFNGVFIFVHAV*KIEC*IHRKYSICYAM*K*EILKLSIISQTGSGKMV*FI
RCCRLFRGVDSFRRLKNT*KA*KMDSKRETVKHLVEEKNVNYEINDL*NRIQYFLLNCI*
TCLLP*CYGFKARGCYTILWAYSWARNLTAFAPTQWLLIGCL*TLSN*QYNTKT*KKVFT
YKDTCVVTRKRCYNYFAHHTRMSQ*VTSFVRSFHGKNYCSVVR*LDRTTPATT*PSPPKR
SD*FVFESNERLFX*STVF*DYYIQKLLLLL*YLISLVYXXGGGGKSGKPLAHNIPLTAV
YVSR*GSLFTTQWX
>_2
TNSSSYPIFLTVYLFSCMRCEKSNVKFTENIAYAMPCKNRKY*SYQ*FPKQVPERWFDLF
VAVGYSVVSILSADSKTHEKPERWTQSGKR*NI*LKRRM*ITK*TIYEIGYNTFC*TAFE
PASYHDVTGSRLVVATLYCGRILGQET*RHLLQPSGCL*VVYKL*VISNTIQKHKKKFSP
TKTHVW*LVSGVTIILPIIRG*ANKLHHSFVHFMVKIIAALFDNLIEQHQQQHDRLHPRD
LIDLYLNQMKDFSXSQLYFKITIYKSYYYYYNI*FLWYTXXVGGENRGNL*HIISH*LRS
M*VVEDLYLLPNG
>_3
RIRARTLFF*RCIYFRACGVKNRMLNSPKI*HMLCHVKIGNIKAINNFPNRFRKDGLIYS
LLSVIPWCRFFPQTQKHMKSLKDGLKAGNGKTFS*REECKLRNKRFMK*DTILFAKLHLN
LPLTMMLRVQGSWLLHYTVGVFLGKKLNGICSNPVVAYRLSINSK*LAIQYKNIKKSFHL
QRHMCGNS*AVLQLFCPSYEDEPISYIIRSFISW*KLLQRCSIT**NNTSNNMTVSTQEI
*LICI*IK*KTFLXVNCILRLLYTKVITIIIIFNFFGILXGWGGKIGETFST*YPINCGL
CESLRIFIYYPM

>LQW155205.y1
TAGCCTGGACCGCGCTGTCGTATCTATAAGTCTCTTGAAGGACGCTTTAGTGTATGGTAGTTTGGTGTCGTAACGAACAA

CTCCGTTATGCCCTGTTTGTAAATAATATACGTTGTATTTATTGGGCTAAGTTTTAAATATTTCATGCAGAAGTTGTGTT

TAGGAGTAAATAAATAGTCGGCTAAGAGCATGTGGTTACAAAAGACTTAAGACTAAGAGGTGGTATTTGCTTTATAAGTA

TAAAAGTAATTAAAAAACTTTGTTTTTTGTGATAATAGTAAAAAGTGCTTACAATTATGACGGTTGCATGCGAAAACCCA

TATACATATATACGGTCACAAATCTTTGAATCACCTATAACGTCGTCTATTTCTTTATGCACTTTATCCTGAATATCAGG

GTTAACAATGAGGTAAAATAACGCCCAACGTATGGTGCTACTACTCGTTTCGGTTCCAGCAGCGAAAAGATCTTTTAAAA

AATAACGTAGTTGTGGTTTCTGTGAAGAAATTGAGTATTGTTATAATAATAAAGGTAATAAAATGTTATAATAAGAATAA

CTTTTGCATAGTAGGTTGGGGGGAGATGGAACACCTTTTTATTTGATTTTCTCGTTCCATTTGGTAGTAAATAAAGATCC

TCACGACTCACATAGAACGCAGTTAATGGGATATTATGTGCTCAAGGTGTCCAGATTTTCCCACCCTAATATGTAATAAC

AAGAAATTAAATGTATAATAAAGTAATACTTTGTATTAGTATCTTAAATACGTGATTCAGAAATCTTCATTGATCAATAC

ATAATCAGACCTGGGGGAACGGCACTTGAGCGGGTGACATCAGTTCAAAAGTCAGACTACTGAAGAAACAAGAGTAACGG

CCAGAGAGGAAATGGCGCAAGCAAAAATGAAAAAAAAAGAGGGAAAACACAAAACGACAGCCACAAAAACATGACTACCC

>_4
G*SCFCGCRFVFSLFFFHFCLRHFLSGRYSCFFSSLTFELMSPAQVPFPQV*LCIDQ*RF
LNHVFKILIQSITLLYI*FLVITY*GGKIWTP*AHNIPLTAFYVSREDLYLLPNGTRKSN
KKVFHLPPTYYAKVILIITFYYLYYYNNTQFLHRNHNYVIF*KIFSLLEPKRVVAPYVGR
YFTSLLTLIFRIKCIKK*TTL*VIQRFVTVYMYMGFRMQPS*L*ALFTIITKNKVF*LLL
YL*SKYHLLVLSLL*PHALSRLFIYS*TQLLHEIFKT*PNKYNVYYLQTGHNGVVRYDTK
LPYTKASFKRLIDTTARSRL
>_5
VVMFLWLSFCVFPLFFSFLLAPFPLWPLLLFLQ*SDF*TDVTRSSAVPPGLIMY*SMKIS
ESRI*DTNTKYYFIIHLISCYYILGWENLDTLST*YPINCVLCES*GSLFTTKWNEKIK*
KGVPSPPNLLCKSYSYYNILLPLLL*QYSISSQKPQLRYFLKDLFAAGTETSSSTIRWAL
FYLIVNPDIQDKVHKEIDDVIGDSKICDRIYVYGFSHATVIIVSTFYYYHKKQSFLITFI
LIKQIPPLSLKSFVTTCS*PTIYLLLNTTSA*NI*NLAQ*IQRILFTNRA*RSCSLRHQT
TIH*SVLQETYRYDSAVQAX
>_6
GSHVFVAVVLCFPSFFFIFACAISSLAVTLVSSVV*LLN*CHPLKCRSPRSDYVLINEDF
*ITYLRY*YKVLLYYTFNFLLLHIRVGKSGHLEHIISH*LRSM*VVRIFIYYQMERENQI
KRCSISPQPTMQKLFLL*HFITFIIITILNFFTETTTTLFFKRSFRCWNRNE**HHTLGV
ILPHC*P*YSG*SA*RNRRRYR*FKDL*PYICIWVFACNRHNCKHFLLLSQKTKFFNYFY
TYKANTTS*S*VFCNHMLLADYLFTPKHNFCMKYLKLSPINTTYIIYKQGITELFVTTPN
YHTLKRPSRDL*IRQRGPGX

>GCiWno464_n10.g1 CHROMAT_FILE: GCiWno464_n10.g1 PHD_FILE: GCiWno464_n10.g1.phd.1
           CHEM: term DYE: big TIME: Mon Oct 15 09:58:50 2001
           TEMPLATE: GCiWno464_n10 DIRECTION: rev
          Length = 925

 Score = 92.8 bits (227), Expect = 4e-19
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = -1

Query: 1   FRKDGLIYSLLSVIPWCRFFPQTQKHIKSLKDGLKAGNGKTF 42
           FRKDGLIYSLLSVIPWCRFFPQTQKHIKSLKDGLKAGNGKTF
Sbjct: 688 FRKDGLIYSLLSVIPWCRFFPQTQKHIKSLKDGLKAGNGKTF 563


>GCiWno400_a20.b1 CHROMAT_FILE: GCiWno400_a20.b1 PHD_FILE: GCiWno400_a20.b1.phd.1
           CHEM: term DYE: big TIME: Wed Oct 10 12:08:39 2001
           TEMPLATE: GCiWno400_a20 DIRECTION: fwd
          Length = 871

 Score = 92.8 bits (227), Expect = 4e-19
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 1   FRKDGLIYSLLSVIPWCRFFPQTQKHIKSLKDGLKAGNGKTF 42
           FRKDGLIYSLLSVIPWCRFFPQTQKHIKSLKDGLKAGNGKTF
Sbjct: 123 FRKDGLIYSLLSVIPWCRFFPQTQKHIKSLKDGLKAGNGKTF 248

>sequence 209 A different C-term from seq 27 or 10 last exon has 7 diffs from seq 10
LQW203867.x1 exon 9 
LQW35630.x1  exon 9 3 diffs with seq 10
GCiWno809_c05.g1
GCiWno49_j21.g1
GCiWno46_e07.g1
GCiWno973_a07.b1 k-helix exon has 5 diffs with seq 10
GCiWno520_h02.b1
MIEAFLRQWTDTTTVIIFLFTLLFYYWYRRPLRFPPGPRGLPLV
GVLPFLRKYTARTMHKWSNKYGPVMSVRMGNEDWVVMGNYEAVHQ (0?) 6 diffs to seq 199
SFVKAGNVFSGRPVLKVANEIAEGKGIVMRDFNTTWKTHRKFGSITLRG (2?)
FGVGKKSLEERIYEEVEVMNKEILSKEGKPFDIT (0?)
EILTNAVMNVISIITTDQRFEYDDEHFRLLQQIFTKW (2?)
FLEPENTAAFAQIIYVPLLCNIPPYRSKYLEVKRDMKRVSG (?)
VFQQMVEQHRKTFDKNNLRDFIDAFICEGKKGTDESFT (0) 
DGQLVQYVREMFEAGTETMTGTVRWAMLCLIHYPDAQKKLREEIFEAI GNNNRPSISDRKAMPFTSAFIQEVFRFRTRVPLGVQHMTTETVNFANYVIPKGTT (0)
ILANMWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSNHVIPFSVGPRHCLGEQLARME
IFIFLVSMVQKFEFLPDPNEPDLPEINDGVKGNGFFPYPFNFVASEI*

Top of seq 27 for comp
MLTNLIANPSISPVLAILSCVIAFYYWYKRPKNMPPGPRGIPFLGIIPFVGMN
PEQAFMQWSKKYGPVITVRMGRKDWVVLCDHDTIHQ (0)

>GCiWno799_o14.b1 CHROMAT_FILE: GCiWno799_o14.b1 PHD_FILE: GCiWno799_o14.b1.phd.1
           CHEM: term DYE: big TIME: Tue Dec  4 12:05:33 2001
           TEMPLATE: GCiWno799_o14 DIRECTION: fwd
          Length = 828

 Score =  148 bits (370), Expect = 2e-35
 Identities = 79/127 (62%), Positives = 80/127 (62%), Gaps = 39/127 (30%)
 Frame = -3

Query: 1   GVLPFLRKYTARTMHKWSNKYGPVMSVRMGNEDWLAMGN--------------------- 39
           GVLPFL KYTARTMHKWS KYGPVMSVRMGNEDW+ MGN                     
Sbjct: 397 GVLPFLGKYTARTMHKWSKKYGPVMSVRMGNEDWVVMGNYEAVHQVLFENFKTAV**TST 218

Query: 40  ------------------SFVKAGNVFSGRPVLKVANEIAEGKGIVMRDFNTTWKTHRKF 81
                             SFVKAGNVFSGRPVLKVANEIAEGKGIVMRDFN  WKTH KF
Sbjct: 217 HKQVD*IGTALLNVTIFQSFVKAGNVFSGRPVLKVANEIAEGKGIVMRDFNAPWKTHSKF 38

Query: 82  GSITLRG 88
            SI LRG
Sbjct: 37  RSIPLRG 17

>GCiWno673_d07.b1_1
ISKPQYSKPVHTNKLIR*ALRF*MLQYFRAL*KQATCSLDVLC*RWRMR*LRARELL*EI
LTQHGKHTESLEALLFGGI*HDLC*R*PLVRKRLNLNNIVLAIFTFKQNSKSNFILFRFG
VGKKSLEERIYEEVEVMNKEILSKEGKPFDITVRACIYYV*TSIIHFNMNMRFFAYFWYS
CVGGKMGHL*HIISKHPDYVLNK**QSIRVVGIRLYISLKVK*MFFNFV*EILTNAVMNV
ISIITTDQRFEYDDEHFRLLXXFSRNVKSHFAYILGTEIMRSYMMD*TVLM
>GCiWno673_d07.b1_2
FQNRSIVNQYTQTS*LDRHCDSECYNISELCKSRQRVLWTSCVEGGE*DS*GQGNCYERF
*HNMENTQKVWKHYSSGVYSMICVNVNR*CEND*I*II*Y*RSLRSNKILNLTLFCSGSG
LVRRA*KSESMKRWR**TKKFFQKKENHLTSQYVPVYIMYKRALYTLT*I*DFSLTFGIA
VWGERWDTFST*YPSILTMF*INNNSLLESWEYGYIFL*R*NKCFLTLFRKS*PTQS*TS
SAS*LPIKGLNMMTSIFDYFXXFHEMLRAILRIY*VQKSCEVT*WIELC*
>GCiWno673_d07.b1_3
FKTAV**TSTHKQVD*IGTAILNVTIFQSFVKAGNVFSGRPVLKVANEIAEGKGIVMRDF
NTTWKTHRKFGSITLRGYIA*FVLTLTVSAKTIKFK*YSTSDLYVQTKF*I*LYFVQVRG
W*EELRRANL*RGGGNEQRNSFKRRKTI*HHSTCLYILCINEHYTL*HEYEIFRLLLV*L
CGGKDGTPLAHNIQAS*LCFK*IITVY*SRGNTVIYFFEGKINVF*LCLGNLDQRSHERH
QHHNYRSKV*I**RAFSTTSXXFTKC*EPFCVYTRYRNHAKLHDGLNCAD

>GCiWno673_d07.b1
ATTTCAAAACCGCAGTATAGTAAACCAGTACACACAAACAAGTTGATTAGATAGGCACTGCGATTCTGAATGTTACAATA
TTTCAGAGCTTTGTAAAAGCAGGCAACGTGTTCTCTGGACGTCCTGTGTTGAAGGTGGCGAATGAGATAGCTGAGGGCAA
GGGAATTGTTATGAGAGATTTTAACACAACATGGAAAACACACAGAAAGTTTGGAAGCATTACTCTTCGGGGGTATATAG
CATGATTTGTGTTAACGTTAACCGTTAGTGCGAAAACGATTAAATTTAAATAATATAGTACTAGCGATCTTTACGTTCAA
ACAAAATTCTAAATCTAACTTTATTTTGTTCAGGTTCGGGGTTGGTAAGAAGAGCTTAGAAGAGCGAATCTATGAAGAGG
TGGAGGTAATGAACAAAGAAATTCTTTCAAAAGAAGGAAAACCATTTGACATCACAGTACGTGCCTGTATATATTATGTA
TAAACGAGCATTATACACTTTAACATGAATATGAGATTTTTCGCTTACTTTTGGTATAGCTGTGTGGGGGGAAAGATGGG
ACACCTTTAGCACATAATATCCAAGCATCCTGACTATGTTTTAAATAAATAATAACAGTCTATTAGAGTCGTGGGAATAC
GGTTATATATTTCTTTGAAGGTAAAATAAATGTTTTTTAACTTTGTTTAGGAAATCTTGACCAACGCAGTCATGAACGTC
ATCAGCATCATAACTACCGATCAAAGGTTTGAATATGATGACGAGCATTTTCGACTACTTCANCANTTTTCACGAAATGT
TAAGAGCCATTTTGCGTATATACTAGGTACAGAAATCATGCGAAGTTACATGATGGATTGAACTGTGCTGATG

>GCiWno673_d07.b1 CHROMAT_FILE: GCiWno673_d07.b1 PHD_FILE: GCiWno673_d07.b1.phd.1
           CHEM: term DYE: big TIME: Fri Nov  2 12:35:19 2001
           TEMPLATE: GCiWno673_d07 DIRECTION: fwd
          Length = 873

 Score = 63.2 bits (151), Expect = 5e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +1

Query: 1   EILTNAVMNVISIITTDQRFEYDDEHFRLL 30
           EILTNAVMNVISIITTDQRFEYDDEHFRLL
Sbjct: 691 EILTNAVMNVISIITTDQRFEYDDEHFRLL 780

>GCiWno520_h02.b1_4
XEVXGYEQKKFLSKGRKTILTSQVRAXYILCINEHYTL*HEYEIFRLLLI*LCGGRWDTF
ST*YPSILTMF*INNNSLLESWGYGYIFL*R*NKYFLTLFRKS*PTQS*TSSAS*LPIKG
LNMMTSISDYFSKFSRNGKMPFCV*YYGTEIHAKFT*WI*TVLSDYPEMFNLPFAGSWNP
RTRLLSHR*FMFLCFAIYPLTEASIWK*NGT*KGFQVCKTLLNIYFKIKMLFFYILQPFF
NKW*SNIEKPLTKITFATLLMLLFVKGRRAQTKVLRYDTL*LI*ANSPSFSVII
>GCiWno520_h02.b1_5
RGXGL*TKEIPFKREENHFDITGTCLXYIMYKRALYTLT*I*DFSLTFDIAVWGKMGHL*
HIISEHPDYVLNK**QSIRVVGIRLYISLKVK*IFFNFV*EILTNAVMNVISIITTDQRF
EYDDEHFRLLQQIFTKW*DAILRIILWYRNTCEVHMMDLNCAE*LS*NV*PSVRRFLEPE
NTAAFAQIIYVPLLCNIPPYRSKYLEVKRDMKRVSGL*NTSKYIF*NKNVIFLHSTAVFQ
QMVEQHRKTFDKNNLRDFIDAFICEGKKGTDESFTV*YFVVNLSQFPFF*RNNX
>GCiWno520_h02.b1_6
KRXRVMNKRNSFQKGGKPF*HHRYVPXIYYV*TSIIHFNMNMRFFAYF*YSCVGEDGTPL
AHNIRAS*LCFK*IITVY*SRGDTVIYFFEGKINIF*LCLGNLDQRSHERHQHHNYRSKV
*I**RAFPTTSANFHEMVRCHFAYNTMVQKYMRSSHDGFELC*VIILKCLTFRSQVPGTR
EHGCFRTDNLCSFALQYTPLPKQVFGSKTGHEKGFRFVKHF*IYILK*KCYFFTFYSRFS
TNGRAT*KNL*QK*PSRLY*CFYL*REEGHRRKFYGMILCS*FKPIPLLLA**X

>LQW203042.y1
>lcl|LQW203042.y1 CHROMAT_FILE: LQW203042.y1 PHD_FILE: LQW203042.y1.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 12:21:14 2001 TEMPLATE: LQW203042 DIRECTION: rev 
TAGAAGGATCTCGATCAATTCAGCTCGGTACAAGGGTATGATATAGAATTACGGGAGAATATGGGACACCTTTACACATA

GTATCCAAATACCATTATCATGATGTTTTAAACACTAAAACGACGCGGCCTGTATATGGGAGTCGCGACGATACGGTTTT

ATAATAATTTTGAAAATAATTTTGAAAATAATCGTTCTTATTTGTTTACTACCACATGGGACGAGGAAATAGAACGAAAA

TTGTCTCATCTTTCCCCAGCCTGTTATAGGCTACTTTATAACATCCTGGCTGTAAACAAGGGGGTTTTCATCTAAGTTTT

GCAGAATAAATAAAACTATTAATTATAAACTGACCATAAACCCTCTATATTATAACTTGCCTATTGCGGCAAATATTTCT

TCCCGAAGTTTTGTTTGCGCATCTGGGTCATGGATGAGACACAGCATCGTCCATCTGACAGTTCCTGTCATTGTTTCTGT

TCCAGCTTCGAACATTTCACGCACATATTGTACAAGCTGCCCATCCTGAGAAGAGCCACCGAACGAAAACATGTCTTATA

TAGATAGAGATGCTCAAATGTGATCTAAGGTATCCCAAAGTTTCAAAAAAGCAGCAGCCTTCTTACCGATCGGGTAAATG

CCAGGAAAAACATTTCAATTTTTCGACTGAACGAAGCTGTGTACACGTTTATCACTTTCTGACATACCTGCTGACGCAAA

ATTTCCGCGCCGATTCAAATCAATTACATCATCTAAAAATTAAACATCATATGTCTTACTGATACCACGTGAGAAAGCGG

CGTCTATCCAAAGATTCCGAATTAAAACCATTGCCCGCTAGTTTCGTAAACCTTCCGTAACAACCATCGTAGGTGTCCAA

GAATCTTGGAGATCGAAAAGAACATTCATTAGCAAAGCGTAAACAGTTCCATTGGCCTCAAAAAACCACTCGTAGC 

>LQW203042.y1_4
YEWFFEANGTVYALLMNVLFDLQDSWTPTMVVTEGLRN*RAMVLIRNLWIDAAFSRGISK
TYDV*FLDDVIDLNRRGNFASAGMSESDKRVHSFVQSKN*NVFPGIYPIGKKAAAFLKLW
DTLDHI*ASLSI*DMFSFGGSSQDGQLVQYVREMFEAGTETMTGTVRWTMLCLIHDPDAQ
TKLREEIFAAIGKL*YRGFMVSL*LIVLFILQNLDENPLVYSQDVIK*PITGWGKMRQFS
FYFLVPCGSKQIRTIIFKIIFKIIIKPYRRDSHIQAASF*CLKHHDNGIWILCVKVSHIL
P*FYIIPLYRAELIEILL
>LQW203042.y1_5
LRVVF*GQWNCLRFANECSFRSPRFLDTYDGCYGRFTKLAGNGFNSESLDRRRFLTWYQ*
DI*CLIFR*CN*FESARKFCVSRYVRK**TCTQLRSVEKLKCFSWHLPDR*EGCCFFETL
GYLRSHLSISIYIRHVFVRWLFSGWAACTICA*NVRSWNRNNDRNCQMDDAVSHP*PRCA
NKTSGRNICRNRQVII*RVYGQFIINSFIYSAKLR*KPPCLQPGCYKVAYNRLGKDETIF
VLFPRPMW**TNKNDYFQNYFQNYYKTVSSRLPYTGRVVLVFKTS**WYLDTMCKGVPYS
PVILYHTLVPS*IDRDPSX
>LQW203042.y1_6
ATSGFLRPMELFTLC**MFFSISKILGHLRWLLRKVYETSGQWF*FGIFG*TPLSHVVSV
RHMMFNF*MM*LI*IGAEILRQQVCQKVINVYTASFSRKIEMFFLAFTRSVRRLLLF*NF
GIP*ITFEHLYLYKTCFRSVALLRMGSLYNMCVKCSKLEQKQ*QELSDGRCCVSSMTQMR
KQNFGKKYLPQ*ASYNIEGLWSVYN**FYLFCKT*MKTPLFTARML*SSL*QAGER*DNF
RSISSSHVVVNK*ERLFSKLFSKLL*NRIVATPIYRPRRFSV*NIMIMVFGYYV*RCPIF
SRNSISYPCTELN*SRSFX

DEV18495.x1 

           CHEM: term DYE: ET TIME: Wed Mar 21 15:33:43 2001
           TEMPLATE: DEV18495 DIRECTION: fwd
          Length = 554

 Score = 78.0 bits (189), Expect = 3e-14
 Identities = 43/70 (61%), Positives = 54/70 (76%), Gaps = 3/70 (4%)
 Frame = -1

Query: 54  FSRGISKTYDV*FLDDVIDL---NRRGNFASAGMSESDKRVHSFVQSKN*NVFPGIYPIG 110
           ++ GISKT  +  +  +I +   N   +FASAG+S+ +KR+HSFVQSKN*NVFPGIYPI 
Sbjct: 350 YTVGISKT*KMF*IKKMIKIKFENCAKSFASAGISKINKRLHSFVQSKN*NVFPGIYPIF 171

Query: 111 KKAAAFLKLW 120
           KKAAAFLKLW
Sbjct: 170 KKAAAFLKLW 141

>DEV18495.x1_4
SVIIGYV*LRYPRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYLETNAPNKVVVLSAGQSF
CIEATALLHSGYQ*DIKNVLNKKNDKN*I*KLREKFCVSRYFKN**TFTQLRSVEKLKCF
SWHLPDL*KGCCFFETLGYLRSHLSISIYIKHVFVRWLFSGWAACTICA*NVRSWNRNND
RNCQ
>DEV18495.x1_5
*RNNRIRVTTLSSRK*QRQT*FLFRIHLLHEISLG*IRKSVLP*NKCAEQSGGVKCRTIF
LYRSDRFTTQWVSVRHKKCFK*KK**KLNLKTARKVLRQQVFQKLINVYTASFSRKIEMF
FLAFTRSLKRLLLF*NFGIP*ITFEHLYLYKTCFRSVALLRMGSLYNMCVKCSKLEQKQ*
QELSX
>DEV18495.x1_6
LA***DTCNYVILA*IATTNVISVSYTPPTRNFAGLDP*KCLTLKQMRRTKWWC*VPDNL
FV*KRPLYYTVGISKT*KMF*IKKMIKIKFENCAKSFASAGISKINKRLHSFVQSKN*NV
FPGIYPIFKKAAAFLKLWDTLDHI*ASLSI*NMFSFGGSSQDGQLVQYVREMFEAGTETM
TGTVX

Next walk 
>rciht025j24 
          Length = 708

 Score =  114 bits (283), Expect = 1e-25
 Identities = 57/60 (95%), Positives = 58/60 (96%), Gaps = 1/60 (1%)
 Frame = -3

Query: 1   SVIIGYV-LRYPRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYLETNAPNKVVVLSAGQSF 59
           SVII YV LRYPRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYL+TNAPNKVVVLSAGQSF
Sbjct: 226 SVIIEYV*LRYPRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYLKTNAPNKVVVLSAGQSF 47

>rciht025j24_4
LQQIFTKW*DAILRIILWYRNTCEVHMMDLNCAE*LS*NV*PSVRRFLEPENTAAFAQII
YVPLLCNIPPYRSKYLEVKRDMKRVSGM*NTSKYIF*NKNVIFLHSTAVFQQMVEQHRKT
FDKNNLRDFIDAFICEGKKGTDESFTV*YFVVNLSQFPFLLA***NTCNYVILA*IATTN
VISVSYTPPTRNFAGLDP*KCLTLKQMRRTKWWC*VPDNLFV*KRPLYYTVGISKT
>rciht025j24_5
SANFHEMVRCHFAYNTMVQKYMRSSHDGFELC*VIILKCLTFRSQVPGTREHGCFRTDNL
CSFALQYTPLPKQVFGSKTGHEKGFRYVKHF*IYILK*KCYFFTFYSRFSTNGRAT*KNL
*QK*PSRLY*CFYL*REEGHRRKFYGMILCS*FKPIPLSFSVIIEYV*LRYPRVNSNDKR
DFCFVYTSYTKFRWVRSVKVSYLKTNAPNKVVVLSAGQSFCIEATALLHSGYQ*DX
>rciht025j24_6
FSKFSRNGKMPFCV*YYGTEIHAKFT*WI*TVLSDYPEMFNLPFAGSWNPRTRLLSHR*F
MFLCFAIYPLTEASIWK*NGT*KGFQVCKTLLNIYFKIKMLFFYILQPFFNKW*SNIEKP
LTKITFATLLMLLFVKGRRAQTKVLRYDTL*LI*ANSPFF*RNNRIRVTTLSSRK*QRQT
*FLFRIHLLHEISLG*IRKSVLP*NKCAEQSGGVKCRTIFLYRSDRFTTQWVSVRX

>rciht035c13 
          Length = 727

 Score =  114 bits (283), Expect = 1e-25
 Identities = 57/60 (95%), Positives = 58/60 (96%), Gaps = 1/60 (1%)
 Frame = -3

Query: 1   SVIIGYV-LRYPRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYLETNAPNKVVVLSAGQSF 59
           SVII YV LRYPRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYL+TNAPNKVVVLSAGQSF
Sbjct: 212 SVIIEYV*LRYPRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYLKTNAPNKVVVLSAGQSF 33

>rciht035c13_4
GLNMMTSISDYFSKFSRNGKMPFCV*YYGTEIHAKFT*WI*TVLSDYPEMFNLPFAGSWN
PRTRLLSHR*FMFLCFAIYPLTEASIWK*NGT*KGFQVCKTLLNIYFKIKMLFFYILQPF
FNKW*SNIEKPLTKITFATLLMLLFVKGRRAQTKVLRYDTL*LI*ANSPFF*RNNRIRVT
TLSSRK*QRQT*FLFRIHLLHEISLG*IRKSVLP*NKCAEQSGGVKCRTIFLYRSDRFTT
PV
>rciht035c13_5
GFEYDDEHFRLLQQIFTKW*DAILRIILWYRNTCEVHMMDLNCAE*LS*NV*PSVRRFLE
PENTAAFAQIIYVPLLCNIPPYRSKYLEVKRDMKRVSGM*NTSKYIF*NKNVIFLHSTAV
FQQMVEQHRKTFDKNNLRDFIDAFICEGKKGTDESFTV*YFVVNLSQFPFLLA***NTCN
YVILA*IATTNVISVSYTPPTRNFAGLDP*KCLTLKQMRRTKWWC*VPDNLFV*KRPLYY
TSX
>rciht035c13_6
V*I**RAFPTTSANFHEMVRCHFAYNTMVQKYMRSSHDGFELC*VIILKCLTFRSQVPGT
REHGCFRTDNLCSFALQYTPLPKQVFGSKTGHEKGFRYVKHF*IYILK*KCYFFTFYSRF
STNGRAT*KNL*QK*PSRLY*CFYL*REEGHRRKFYGMILCS*FKPIPLSFSVIIEYV*L
RYPRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYLKTNAPNKVVVLSAGQSFCIEATALLH
QX
>ciht025j24 
          Length = 671

 Score = 98.7 bits (242), Expect = 1e-20
 Identities = 48/51 (94%), Positives = 49/51 (95%), Gaps = 1/51 (1%)
 Frame = +2

Query: 1   SVIIGYV-LRYPRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYLETNAPNKV 50
           SVII YV LRYPRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYL+TNAPNKV
Sbjct: 518 SVIIEYV*LRYPRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYLKTNAPNKV 670

>LQW163322.x1
>lcl|LQW163322.x1 CHROMAT_FILE: LQW163322.x1 PHD_FILE: LQW163322.x1.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 11:17:42 2001 TEMPLATE: LQW163322 DIRECTION: fwd 
AACGGCAGTGCAGCTTTTGTATAGAAGCGACCGCTTTACTACACAGTGGGTATCAGTAAGACATAAAAAATGTTTTAAAT

AAAAAAAATGATAAAAATTAAATTTGAAAACTGCGCGAAAAGTTTTGCGTCAGCAGGTATTTCAAAAATTAATAAACGTT

TACACAGCTTCGTTCAGTCGAAAAATTGAAATGTTTTTCCTGGCATTTACCCGATCTTTAAAAAGGCTGCTGCTTTTTTG

AAACTTTGGGATACCTTAGATCACATTTGAGCATCTCTATCTATATAAAACATGTTTTCGTTCGGTGGCTCTTCTCAGGA

TGGGCAGCTTGTACAATATGTGCGTGAAATGTTCGAAGCTGGAACAGAAACAATGACAGGAACTGTCAGATGGGCGATGC

TGTGTCTCATCCATTACCCAGATGGGCAAAAAAAACTTCGGGAAGAAATATTTGAAGCAATAGGCAAGTTATAATATAGA

GGGTTTATGGTCAGTTTATAATTAATAGTTTTATTTATTCTGCAAAACTTAGATTAAACCCCCTTGTTTACAACCAGGAT

GTTATAAAGTATAACAGGCTGGGGAAAGATGGGACAATTTTCGTTATATTTCCTCGTCCCATGTGGTAGTAAACAAATAA

GAACGTTCAAAGAATTATTATAAAACCGTATCGTCGCGACTCCCATATACAGGCCGCGTCGATATTGTTTAAAACATCAT

GATAATGGTACTTGGATACTATGTGCTAAAGGTGTCCCATATTCCCCCGTAATTCTATATCATACCCTTTTACAGATTTA

TCATTTTACATTGTATTACTGTTGATCTATACATAAGTGGGATACGTAGGCACTGATCCAATTCGGGACATGTGTACCCA

TCCCAGCTATCAAATGTAAAATCGGTAAAATTGGACTTCTGGCTTCCACGGAACACTCGAAAGGATACACAGATATTACA

CGGCTTCAAAGTAGCGCATCAAATAAACCTATGACAGCTCACATGTATTAAGAGACGCAACTTA 


>GCiWno379_j24.b1_4
XL*LX*ANFPFF*RNNRIRVXTLSSRK*QRQT*FLFRIHLLHEISLG*IRKSILP*NKCA
EQSGGVKCRTIFLYRSDRFTTQWVSVRHKKMF*IKKMIKIKFENCAKSFASAGISKINKR
LHSFVQSKN*NVFPGIYPIFKKAAAFLKLWDTLDHI*ASLSI*NMFSFGGSSQDGQLVQY
VREMFEAGTETMTGTVRWAMLCLIHYPDAQTKLREEIFAAIGKL*YRGFMVSL*LIVLFI
LQNLDENPLVYNQDVIKYIRLGKDRTMFVRCFS
>GCiWno379_j24.b1_5
FVVNXSQFPFLLA***NTCXYVIFA*IATTNVISVSYTPPTRNFAGLDP*KYLTLKQMRR
TKWWC*VPDNLFV*KRPLYYTVGISKT*KNVLNKKNDKN*I*KLR*KFCVSRYFKN**TF
TQLRSVEKLKCFSWHLPDL*KGCCFFETLGYLRSHLSISIYIKHVFVRWLFSGWAACTIC
A*NVRSWNRNNDRNCQMGDAVSHPLPRCANKTSGRNICRNRQVII*RVYGQFIINSFIYS
AKLR*KPPCLQPGCYKVYQAGQR*DHVCSLF*X
>GCiWno379_j24.b1_6
FCS*XKPISLSFSVIIEYVXLRYLRVNSNDKRDFCFVYTSYTKFRWVRSVKVSYLKTNAP
NKVVVLSAGQSFCIEATALLHSGYQ*DIKKCFK*KK**KLNLKTALKVLRQQVFQKLINV
YTASFSRKIEMFFLAFTRSLKRLLLF*NFGIP*ITFEHLYLYKTCFRSVALLRMGSLYNM
CVKCSKLEQKQ*QELSDGRCCVSSITQMRKQNFGKKYLPQ*ASYNIEGLWSVYN**FYLF
CKT*MKTPLFTTRML*SISGWAKIGPCLFVVLV

>GCiWno973_a07.b1_4
F*SVKDAVL*FCKYTCXYTKWEKKIMK*WHLTLRYFILTYAALFYKGXGPPLSSFIYINI
LFDAERDVAHN*MW*LILGNNNRPSISDRKAMPFTSAFIQEVFRFRTRVPLGVQHMTTET
VNFANYVIPKGTTVLL*GIL*CRCNIVYSILYFCEMLFRYFRFLPICGRCTTILMCGTNQ
ASLNLSVTSMTKETLFSLNT*YLSRWVHVIAWENNLLEWKSSSSWFQWFRSLSFFRIRTN
QIFLRLMTELRATVSFHTRSTLLLVRFNLM
>GCiWno973_a07.b1_5
VLECERCGFIVL*IYLXIYQMGKENHEIVASYPALLHINLRGSILQRXRSASKLVYLY*H
PF*R*TGCCT*LNVVTYFR*QQPPEHKRSQSNAIHLSFYTRGVSISHSRSFGRPAHDNRN
RKLRKLCYSKRNHGTVIGYIVMSL*YSI*YFVFL*NVVSIF*ILANMWAVHNDPDVWDEP
SKFKPERHLDDKGNFVQSKHVIPFSVGPRHCLGEQLARMEIFIFLVSMVQKFEFLPDPNE
PDLPEINDGVKGNGFFPYSFNFVASEI*SNX
>GCiWno973_a07.b1_6
FRV*KMRFYSSVNILVXIPNGKRKS*NSGILPCATSY*PTRLYSTKV*VRL*ARLFILTS
FLTLNGMLHITKCGDLF*VTTTARA*AIAKQCHSPQLLYKRCFDFALAFLWASST*QQKP
*TSQTMLFQKEPRYCYRVYCNVVVI*YIVFCIFVKCCFDILDSCQYVGGAQRS*CVGRTK
QV*T*ASPR*QRKLCSV*TRDTFLGGSTSLLGRTTCSNGNLHLPGFNGSEV*VSSGSERT
RSS*D**RS*GQRFLSILVQLCC**DLI*X

Walk 1 
>GCiWno1017_g22.g1 CHROMAT_FILE: GCiWno1017_g22.g1 PHD_FILE: GCiWno1017_g22.g1.phd.1
           CHEM: term DYE: big TIME: Thu Dec 27 11:52:37 2001
           TEMPLATE: GCiWno1017_g22 DIRECTION: rev
          Length = 905

 Score =  208 bits (523), Expect = 6e-53
 Identities = 107/118 (90%), Positives = 110/118 (92%), Gaps = 4/118 (3%)
 Frame = -3

Query: 50  SVKDAVL-FCKYTCXYTKWEKKIMK-WHLTLRYFILTYAALFYKGXGPPLSSFIYINILF 107
           SV+DAVL FCKYT  YTKWEKKIMK WHLTLRYFILT AALFYKG GPPLSSFIYINILF
Sbjct: 492 SVEDAVL*FCKYTLLYTKWEKKIMK*WHLTLRYFILTNAALFYKGLGPPLSSFIYINILF 313

Query: 108 DAERDVAHN-MW-LILGNNNRPSISDRKAMPFTSAFIQEVFRFRTRVPLGVQHMTTET 163
           DAERDVAHN MW LILGNNNRPSISDRK+MPFTSAFIQEVFRFRTRVPLGVQHMTT+T
Sbjct: 312 DAERDVAHN*MW*LILGNNNRPSISDRKSMPFTSAFIQEVFRFRTRVPLGVQHMTTQT 139

>GCiWno1017_g22.g1_4
NTPCCKPPWPRDVIKGITRGGEKDGNNCSVIISSFPMWVVKQIRKVQKDYV*NPYGRRLP
IYRPASLLFKTS**WYLDTRX*RCPIFPPLILYHTLLQIYHFNIFIHVVLLD*MGYR*AR
ESHIS*SWFKQLTTLF*SVEDAVL*FCKYTLLYTKWEKKIMK*WHLTLRYFILTNAALFY
KGLGPPLSSFIYINILFDAERDVAHN*MW*LILGNNNRPSISDRKSMPFTSAFIQEVFRF
RTRVPLGVQHMTTQTVNFANYVIPKGTTVLL*GIL*CRCNIVYSILYVCEMLFR*VPSSN
R
>GCiWno1017_g22.g1_5
KHPML*TPLAQGCYKRYNQGWGKGWEQLFGYNFLVPHVGSKTNKEGSEGLCIKPVWSATP
HIQARVVIV*NIMIMVFGY*VXKVSHIPPVNSISYPFTDISL*YFYTCSTIRLDGIPLGT
*ITYFVIVV*TINNAVLEC*RCGFIIL*IYFVIYQMGKENHEIVASYPALLHINQRGSIL
QRFRSASKLVYLY*HPF*R*TGCCT*LNVVTYFR*QQPPEHKRSQINAIHLSFYTRGVSI
SHSRSFGRPTHDNTNRKLRKLCYSKRNHGTVIGYIVMSL*YSI*YFVCL*NVVSIGTELE
SX
>GCiWno1017_g22.g1_6
QTPHVVNPPGPGML*KV*PGVGKRMGTIVRL*FPRSPCG**NK*GRFRRIMYKTRMVGDS
PYTGPRRYCLKHHDNGIWILGXKGVPYSPR*FYIIPFYRYITLIFLYM*YY*IRWDTVRH
VNHIFRDRGLNN*QRCFRVLKMRFYNSVNILCYIPNGKRKS*NSGILPCATSY*PTRLYS
TKV*VRL*ARLFILTSFLTLNGMLHITKCGDLF*VTTTARA*AIANQCHSPQLLYKRCFD
FALAFLWASNT*QHKP*TSQTMLFQKEPRYCYRVYCNVVVI*YIVFCMFVKCCFDRYRAR
IX


LQW194191.y2 
LQW194191.y2.phd.1 LQW194191.x1 

           14:34:39 2001 TEMPLATE: LQW194191 DIRECTION: rev
          Length = 916

 Score = 65.2 bits (156), Expect(2) = 2e-18
 Identities = 30/34 (88%), Positives = 33/34 (96%)
 Frame = +2

Query: 27  FPPLILYHTLLQIYHFNIFIHVVLLD*MGYR*AR 60
           + P+ILYHTLLQIYHFNIFIHVVLLD*+GYR*AR
Sbjct: 437 YSPVILYHTLLQIYHFNIFIHVVLLD*VGYR*AR 538

 Score = 46.1 bits (107), Expect(2) = 2e-18
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = +1

Query: 5   ASLLFKTS**WYLDTRX*RCPIFP 28
           ASLLFKTS**WYLDT  *RCPIFP
Sbjct: 373 ASLLFKTS**WYLDTMC*RCPIFP 444

>LQW194191.y2_1
XTLSXYHYVRECSKLDRHMTGLSDGRCCVSSITRWQKNSGRTI*SNRQVII*RVYGQFII
NSFIYSAKLRLNPLVYNQDVIKYNRLGKDGTIFVIFPRPMW**TNKNVQRIIIKPYRRDS
HIQAASLLFKTS**WYLDTMC*RCPIFPRNSISYPFTDISL*YFYTCSTIRLGGIPLGT*
ITYFVIVV*TITNAVSEC*RCGYIVLYIYFVIYPMGQDTHEIVASYVSYLYEQRGLSTSL
RRSKRY**HL*VTDVLLLAFSNTRVQ*NAPVSRLSSSGP*TG*ISSVS*SIKFSKSGPEL
LSRCFX
>LQW194191.y2_2
VHSAXTTMCVNVRSWTDT*QDCQMGDAVSHPLPDGKKIREELFEAI GKL*YRGFMVSL*L
IVLFILQNLD*TPLFTTRML*SITGWGKMGQFSLYFLVPCGSKQIRTFKELL*NRIVATP
IYRPRRYCLKHHDNGIWILCAKGVPYSPVILYHTLLQIYHFNIFIHVVLLD*VGYR*ARE
SHIS*SWFKQLPTLFQSVEDAVI*FCTYTLLYTQWDKTLMK*WHLT*ATYMNNAVYLHRY
VDLSVINNIFE*RMCYSWLLVTREYNETLPFQGCPRLGHEQDEFQASVDQSSSANQDLNC
YLVAL
>LQW194191.y2_3
YTQPVPLCA*MFEAGQTHDRTVRWAMLCLIHYQMAKKFGKNYLKQ*ASYNIEGLWSVYN*
*FYLFCKT*IKPPCLQPGCYKV*QAGERWDNFRYISSSHVVVNK*ERSKNYYKTVSSRLP
YTGRVVIV*NIMIMVFGYYVLKVSHIPP*FYIIPFYRYITLIFLYM*YY*IRWDTVRHVN
HIFRDRGLNNYQRCFRVLKMRLYSSVHILCYIPNGTRHS*NSGILRELLI*TTRSIYIVT
SI*ALLITSLSNGCATLGF**HASTMKRSRFKVVLVWAMNRMNFKRQLINQVQQIRT*IA
ISLL

YVREMFEAGQTHDRT-VRWAMLCLIHYQMAKKKIREELFEAI
YVREMFEAGTETMTGXVRWAMLCLIHYPDAQKKLREEIFEAI GCiWno874_b07.g1
Best hit
LQW163322.x1 
LQW163322.x1.phd.1 LQW163322.y1 

           11:17:42 2001 TEMPLATE: LQW163322 DIRECTION: fwd
          Length = 1024

 Score = 63.6 bits (152), Expect = 2e-10
 Identities = 31/42 (73%), Positives = 35/42 (82%), Gaps = 1/42 (2%)
 Frame = +1

Query: 7   YVREMFEAG-QTHDRTVRWAMLCLIHYQMAKKKIREELFEAI 47
           YVREMFEAG +T   TVRWAMLCLIHY   +KK+REE+FEAI
Sbjct: 337 YVREMFEAGTETMTGTVRWAMLCLIHYPDGQKKLREEIFEAI 462 5 diffs with seq 209

>GCiWno874_b07.g1 CHROMAT_FILE: GCiWno874_b07.g1 PHD_FILE: GCiWno874_b07.g1.phd.1
           CHEM: term DYE: big TIME: Mon Dec 10 12:34:53 2001
           TEMPLATE: GCiWno874_b07 DIRECTION: rev
          Length = 977

 Score =  173 bits (433), Expect = 1e-42
 Identities = 98/115 (85%), Positives = 102/115 (88%), Gaps = 6/115 (5%)
 Frame = -3
This is seq 209 
Query: 1   YVREMFEAG-QTHDRTVRWAMLCLIHYQMAKKKIREELFEAIGKL-YRGFMVSL-LIVLF 57
           YVREMFEAG +T    VRWAMLCLIHY  A+KK+REE+FEAIGKL YRGFMVSL LIVLF
Sbjct: 627 YVREMFEAGTETMTGXVRWAMLCLIHYPDAQKKLREEIFEAIGKL*YRGFMVSL*LIVLF 448

Query: 58  ILQNLD-TPLFTTRML-SITGWGKMGQFSLYFLVPCGSKQIRTFKELL-NRIVAT 109
           ILQNLD TPLFTTRML SITGWGKMGQFSLYFLVPCGSKQIRTFKELL N IVAT
Sbjct: 447 ILQNLD*TPLFTTRML*SITGWGKMGQFSLYFLVPCGSKQIRTFKELL*NHIVAT 283

>sequence 10, 11, 22  28 accessions 45% to 2C8 might be two closely related genes
this seq from NLWA is almost identical to seq 2 (may be part of a gene cluster)
YFFIVLKYCTDVLINLLSADVFQELVDQHRISFDKNNIRDFIDAFICEVDNGKDDSFT (0)
DRQLVQYLREIFEAGTQTTTGTLNWAILCLIHYPQAQKKLRNEILDVI 508
GNNNRPSISDRKSMPFTSAFIQEVFRFRTRVRTGVPHKTTETVNFANYVIPKGTTIVA
NLWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSKHVIPFSVGPRHCLGEQLARMKIFIFLVSMVQKFEF
LPDPNEPDLPEIDDGVIGNGFFPYPFNFVANEI*
DEV12046.y1 I-HELIX FID not FTD in seq 11
DEV16908.x1
DEV3110.y1 
DEV36061.y1  
DEV39761.y1  
DEV40662.x1  FID not FTD one more diff
DEV49690.x1   I-HELIX *
LQW134849.x01 
LQW134849.x1  
LQW141933.y1 
LQW172858.y1 
LQW197304.x1 
LQW210937.y1 
LQW214724.x2  
LQW214724.y1   I-HELIX * OPPOSITE END OF SEQ 11
LQW238538.x1   I-HELIX * OPPOSITE END OF SEQ 22
LQW238538.y1 
LQW251009.x1 FID not FTD
LQW254973.x1 
LQW254973.y1
LQW271884.y1 
LQW29511.x1  FID not FTD one more diff I-HELIX
LQW29511.y1 
LQW51603.x1   I-HELIX * OPPOSITE END OF SEQ 11
LQW51603.y1   
LQW63108.y1  FID not FTD one more diff I-HELIX
LQW63573.x1   I-HELIX  *
LQW77027.y1  

GCiWno973_a07.b1 CHROMAT_FILE: GCiWno973_a07.b1 PHD_FILE: GCiWno973_a07.b1.phd.1
           CHEM: term DYE: big TIME: Tue Dec 25 11:42:59 2001
           TEMPLATE: GCiWno973_a07 DIRECTION: fwd
          Length = 811

 Score =  150 bits (374), Expect(2) = 3e-56
 Identities = 67/69 (97%), Positives = 69/69 (99%)
 Frame = -1

Query: 166 NLWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSKHVIPFSVGPRHCLGEQLARMKIFIFL 225
           N+WAVHNDPDVWDEPSKFKPERHLDDKGNFVQSKHVIPFSVGPRHCLGEQLARM+IFIFL
Sbjct: 316 NMWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSKHVIPFSVGPRHCLGEQLARMEIFIFL 137

Query: 226 VSMVQKFEF 234
           VSMVQKFEF
Sbjct: 136 VSMVQKFEF 110


 Score = 91.3 bits (223), Expect(2) = 3e-56
 Identities = 45/58 (77%), Positives = 46/58 (78%)
 Frame = -2

Query: 102 ILGNNNRPSISDRKSMPFTSAFIQEXXXXXXXXXXGVPHKTTETVNFANYVIPKGTTV 159
           ILGNNNRPSISDRK+MPFTSAFIQE          GV H TTETVNFANYVIPKGTTV
Sbjct: 582 ILGNNNRPSISDRKAMPFTSAFIQEVFRFRTRVPLGVQHMTTETVNFANYVIPKGTTV 409

>GCiWno809_c05.g1 CHROMAT_FILE: GCiWno809_c05.g1 PHD_FILE: GCiWno809_c05.g1.phd.1
           CHEM: term DYE: big TIME: Wed Dec  5 19:20:32 2001
           TEMPLATE: GCiWno809_c05 DIRECTION: rev
          Length = 890

 Score =  148 bits (369), Expect(2) = 3e-55
 Identities = 66/69 (95%), Positives = 68/69 (97%)
 Frame = +1

Query: 166 NLWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSKHVIPFSVGPRHCLGEQLARMKIFIFL 225
           N+WAVHNDPDVWDEPSKFKPERHLDDKGNFVQS HVIPFSVGPRHCLGEQLARM+IFIFL
Sbjct: 403 NMWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSNHVIPFSVGPRHCLGEQLARMEIFIFL 582

Query: 226 VSMVQKFEF 234
           VSMVQKFEF
Sbjct: 583 VSMVQKFEF 609


 Score = 90.1 bits (220), Expect(2) = 3e-55
 Identities = 45/58 (77%), Positives = 46/58 (78%)
 Frame = +2

Query: 102 ILGNNNRPSISDRKSMPFTSAFIQEXXXXXXXXXXGVPHKTTETVNFANYVIPKGTTV 159
           ILGNNNRPSISDRK+MPFTSAFIQE          GV H TTETVNFANYVIPKGTTV
Sbjct: 137 ILGNNNRPSISDRKAMPFTSAFIQEVFRFRTRVP*GVQHMTTETVNFANYVIPKGTTV 310

>cinc016b21 
          Length = 698

 Score =  197 bits (496), Expect = 1e-49
 Identities = 100/121 (82%), Positives = 102/121 (83%), Gaps = 3/121 (2%)
 Frame = +2

Query: 59  DRQLVQYLREIFEAGTQTTTGTLNWAILCLIHYPQAQKKLRNEIL---GNNNRPSISDRK 115
           DRQLVQYLREIFEAGTQTTTGTLNWAILCLIHYPQAQKKLRNEIL   GNNNRPSISDRK
Sbjct: 347 DRQLVQYLREIFEAGTQTTTGTLNWAILCLIHYPQAQKKLRNEILDVIGNNNRPSISDRK 526

Query: 116 SMPFTSAFIQEXXXXXXXXXXGVPHKTTETVNFANYVIPKGTTVSFIAMWNLWAVHNDPD 175
           SMPFTSAFIQE          GVPHKTTETVNFANYVIPKGTT+    + NLWAVH DPD
Sbjct: 527 SMPFTSAFIQEVFRFRTRVRTGVPHKTTETVNFANYVIPKGTTI----VANLWAVHXDPD 694

Query: 176 V 176
           V
Sbjct: 695 V 697


 Score = 85.0 bits (207), Expect = 1e-15
 Identities = 39/40 (97%), Positives = 39/40 (97%)
 Frame = +1

Query: 19  ADVFQELVDQHRISFDKNNIRDFTDAFICEVDNGKDDSFT 58
           ADVFQELVDQHRISFDKNNIRDF DAFICEVDNGKDDSFT
Sbjct: 88  ADVFQELVDQHRISFDKNNIRDFIDAFICEVDNGKDDSFT 207

>cinc016b21
CGGCACGAGGCCTCGTGCCCTTTGCTTTGCAATATACCCCCTTACCGAAGCAAGTATTTGGAAGTAAAGCGGGACATGAT
GCAAATGGCCGACGTTTTTCAAGAACTGGTAGACCAACACAGAATATCTTTCGACAAAAATAACATTCGAGACTTTATTG
ATGCTTTCATTTGCGAGGTTGACAATGGAAAAGACGACAGTTTTACAGTAATAATAACTTATACAAATGATAAGTAAAAG
GTTCATTTAATATAGGCTATAGCAAAAACAGTGTATTGCGACACGAAGTGTAAGCTAACTCGAACCAAAATGTACAACTT
TCGTTAATATATCTCTCAAATCAAAGGATCGACAGCTTGTACAGTACCTGCGGGAAATATTTGAAGCTGGAACGCAAACC
ACCACCGGTACACTTAATTGGGCAATACTATGTCTCATCCATTATCCACAAGCACAAAAGAAACTGAGAAATGAAATTCT
TGACGTCATTGGTAACAACAACCGCCCGAGCATAAGCGATCGCAAATCAATGCCATTCACCTCAGCATTTATACAAGAGG
TGTTTCGATTTCGTACACGTGTCCGAACAGGCGTTCCGCATAAAACAACAGAAACTGTAAACTTCGCAAACTATGTAATT
CCTAAGGGAACAACGATCGTAGCCAATCTATGGGCGGTGCACNACGATCCTGATGTGT

>cinc016b21_1
RHEASCPLLCNIPPYRSKYLEVKRDMMQMADVFQELVDQHRISFDKNNIRDFIDAFICEV
DNGKDDSFTVIITYTNDK*KVHLI*AIAKTVYCDTKCKLTRTKMYNFR*YISQIKGSTAC
TVPAGNI*SWNANHHRYT*LGNTMSHPLSTSTKETEK*NS*RHW*QQPPEHKRSQINAIH
LSIYTRGVSISYTCPNRRSA*NNRNCKLRKLCNS*GNNDRSQSMGGAXRS*CV
>cinc016b21_2
GTRPRALCFAIYPLTEASIWK*SGT*CKWPTFFKNW*TNTEYLSTKITFETLLMLSFARL
TMEKTTVLQ***LIQMISKRFI*YRL*QKQCIATRSVS*LEPKCTTFVNISLKSKDRQLV
QYLREIFEAGTQTTTGTLNWAILCLIHYPQAQKKLRNEILDVIGNNNRPSISDRKSMPFT
SAFIQEVFRFRTRVRTGVPHKTTETVNFANYVIPKGTTIVANLWAVHXDPDVX
>cinc016b21_3
ARGLVPFALQYTPLPKQVFGSKAGHDANGRRFSRTGRPTQNIFRQK*HSRLY*CFHLRG*
QWKRRQFYSNNNLYK**VKGSFNIGYSKNSVLRHEV*ANSNQNVQLSLIYLSNQRIDSLY
STCGKYLKLERKPPPVHLIGQYYVSSIIHKHKRN*EMKFLTSLVTTTARA*AIANQCHSP
QHLYKRCFDFVHVSEQAFRIKQQKL*TSQTM*FLREQRS*PIYGRCTTILMC

>cibd036p10 
          Length = 599

 Score =  193 bits (485), Expect = 2e-48
 Identities = 91/98 (92%), Positives = 93/98 (94%)
 Frame = +1

Query: 137 GVPHKTTETVNFANYVIPKGTTVSFIAMWNLWAVHNDPDVWDEPSKFKPERHLDDKGNFV 196
           GVPHKTTETVNFANYVIPKGTT+    + NLWAVHNDPDVWDEPSKFKPERHLDDKGNFV
Sbjct: 1   GVPHKTTETVNFANYVIPKGTTI----VANLWAVHNDPDVWDEPSKFKPERHLDDKGNFV 168

Query: 197 QSKHVIPFSVGPRHCLGEQLARMKIFIFLVSMVQKFEF 234
           QSKHVIPFSVGPRHCLGEQLARMKIFIFLVSMVQKFEF
Sbjct: 169 QSKHVIPFSVGPRHCLGEQLARMKIFIFLVSMVQKFEF 282

>cibd036p10
GGCGTTCCGCATAAAACAACAGAAACTGTAAACTTCGCAAACTATGTAATTCCTAAGGGAACAACGATCGTAGCCAATCT
ATGGGCGGTGCACAACGATCCTGATGTGTGGGACGAACCAAGCAAGTTTAAACCTGAGCGTCACCTCGATGACAAAGGAA
ACTTTGTTCAGTCTAAACACGTGATACCTTTCTCGGTGGGTCCACGTCATTGCTTGGGAGAACAACTTGCTCGAATGAAA
ATCTTCATCTTCCTGGTTTCAATGGTTCAGAAGTTTGAGTTTCTTCCGGATCCGAACGAACCAGATCTTCCTGAGATTGA
TGACGGAGTTATCGGGAACGGTTTCTTTCCATATCCGTTTAACTTTGTTGCCAATGAGATTTAACACCAACACCTATGTC
AGTAGCGCTTAATGCTTGATATATTTACTCTATACTTTTTGCTTTGCAAGTATATCTAGGGTTGTGACTTTCCATAAAAT
GATCGAAGATAATTTACAAAGTCTCAACAAATATAAAAAGTTATTTTTTATACGTATACCTAACTTCGGCATTATATCGT
ACATCCAGCATGCTTCATATCTCACTGTTCATATTGTAG

GVPHKTTETVNFANYVIPKGTTIVANLWAVHNDPDVWDEPSKFKPERHLDDKGNFVQSKH
VIPFSVGPRHCLGEQLARMKIFIFLVSMVQKFEF
LPDPNEPDLPEIDDGVIGNGFFPYPFNFVANEI*

>sequence 5, 12, 194 
DEQLHHYTRDLLVAAINTTT 
AAFGWCVVSLLRHPECQDKIWQEVDKVIGDETPSCKHQENMPYMRSFIQEIHRH 
RSIATLNLPHRTVRSVRLCGYDIPKDTPVLTNIWRVHNNQNVWKNPH 
EFRPDRHLDSNGNFVSSNNVIPFACGYRRCLGEQIAKAEIFLFIVNIVKRF 
HLVVDQVTGPPTLEKDPKGAVNTPAPFRFSVRARK
LQW173019.y2
LQW18289.x1 exxr to pkg
DEV16259.x1 I-HELIX
DEV52712.y1 I-HELIX 2 DIFFS
LQW229033.y1 I-helix
LQW1044.x2 I-helix
GCiWno59_m08.g1
GCiWno329_m07.b1
GCiWno150_b22.g1

>GCiWno150_b22.g1
CCATATACCCCCACTACTATTTAGTAGGGCGGTGGAAAACGGGCACCTTTAACCATACTATCTAAATATCCTAGTCGCGT
TTTAAACAAATAACAATGGCTTATGTATAAGTCGTAAGTAGGCCTATATACGGTTTATAACTCTATGAATGTTTTTTGTT
TACTACCAAATGGGACGAGAAAATAGAATAAAAAGTGTCCCATCTTCCCCCACCCTTACTGTATAAAAAAAAGTTGCCAT
GATAGGTTAAGCAAAAAGAGGTAATAATGCTATGTAGCGAAATAGAACATCAAGCGAATATTTTATGGTAAATGCCGTTA
CGTTATTAAGTGTTTGGTCCTGGACGCTGTTCTATAACGGCCAATCGCTACTGACCAGACTGCTGCGCTATAGGCTTCCT
TTATTAATAATTTATATTCACGTAAACAAGCATATAGTAGGGTGGGGGAAGGCGGGACACCTTTTCATTCCATTTTCTCC
TCTCATTTGGTTTTAAACAAAGAACATTCAAAGAATTATAAAAACCGTATCCTCACGACCCCCATAGACCGTTGTTAATT
GTTTAAAAACACAATTAGGATATTATGTGCTAAAGGCGCACCGTCTTCCCCAAGCCTACCATGCGTTTTTATTTAAATCA
GGCGACGAAACTCCCAGTTGCAAACACCAAGAANACATGCCGTACATGCGCTCGTTTATACAAGAAATACACCGGCACCG
ATCCATTGCAACGCTGAATCTGCCTCATCGAACTGTTCGAAGCGTGCGACTGTGCGGTTATGACATTCCTAAAGATACCT
CCAGTAGTACATTGGCCAATCAGCACACATCAGACATATGCGNTTACCTTATGTGTNTTTCTAAATTCGCAGCCAGACGT
TTGACAANAATA

>GCiWno150_b22.g1_1
PYTPTTI**GGGKRAPLTILSKYPSRVLNK*QWLMYKS*VGLYTVYNSMNVFCLLPNGTR
K*NKKCPIFPHPYCIKKSCHDRLSKKR**CYVAK*NIKRIFYGKCRYVIKCLVLDAVL*R
PIATDQTAAL*ASFINNLYSRKQAYSRVGEGGTPFHSIFSSHLVLNKEHSKNYKNRILTT
PIDRC*LFKNTIRILCAKGAPSSPSLPCVFI*IRRRNSQLQTPRXHAVHALVYTRNTPAP
IHCNAESASSNCSKRATVRL*HS*RYLQ*YIGQSAHIRHMRLPYVXF*IRSQTFDXNX
>GCiWno150_b22.g1_2
HIPPLLFSRAVENGHL*PYYLNILVAF*TNNNGLCISRK*AYIRFITL*MFFVYYQMGRE
NRIKSVPSSPTLTV*KKVAMIG*AKRGNNAM*RNRTSSEYFMVNAVTLLSVWSWTLFYNG
QSLLTRLLRYRLPLLIIYIHVNKHIVGWGKAGHLFIPFSPLIWF*TKNIQRIIKTVSSRP
P*TVVNCLKTQLGYYVLKAHRLPQAYHAFLFKSGDETPSCKHQEXMPYMRSFIQEIHRHR
SIATLNLPHRTVRSVRLCGYDIPKDTSSSTLANQHTSDICXYLMCXSKFAARRLTXI
>GCiWno150_b22.g1_3
IYPHYYLVGRWKTGTFNHTI*IS*SRFKQITMAYV*VVSRPIYGL*LYECFLFTTKWDEK
IE*KVSHLPPPLLYKKKLP**VKQKEVIMLCSEIEHQANILW*MPLRY*VFGPGRCSITA
NRY*PDCCAIGFLY**FIFT*TSI**GGGRRDTFSFHFLLSFGFKQRTFKEL*KPYPHDP
HRPLLIV*KHN*DIMC*RRTVFPKPTMRFYLNQATKLPVANTKXTCRTCARLYKKYTGTD
PLQR*ICLIELFEACDCAVMTFLKIPPVVHWPISTHQTYAXTLCVFLNSQPDV*QX

>GCiWno329_m07.b1
TTGTTTAAAACCAAATGAGAGGAGAAAATGGAATGAAAAGGTGTCCCGCCTTCCCCCACCCTACTATATGCTTGTTTACG
TGAATATAAATTATTAATAAAGGAAGCCTATAGCGCAGCAGTCTGGTCAGTAGCGATTGGCCGTTATAGAACAGCGTCCA
GGACCAAACACTTAATAACGTAACGGCATTTACCATAAAATATTCGCTTGATGTTCTATTTCGCTACATAGCATTATTAC
CTCTTTTTGCTTAACCTATCATGGCAACTTTTTTTTTATACAGTAAGGGTGGGGGAAGATGGGACACTTTTTATTCTATT
TTCTCGTCCCATTTGGTAGTAAACAAAAAACATTCATAGAGTTATAAACCGTATATAGGCCTACTTACGACTTATACATA
AGCCATTGTTATTTGTTTAAAACGCGACTAGGATATTTAGATAGTATGTGTTAAAGGTGCCCGTTTTCAACCGCCCTACT
AAATAGTAGTGTGGGGTTATATGGGACATATTTTCATTATGTTTTTCCCGTCCCATTTTTTACATAATTTTAACATAGGT
GCAAAAACAATAAAGCTTGTATAAAACTCAGTAGTTTGTAACTTAGAAATACTGATCCTTGTAACCGTTCCAAATAAACT
TACCGATAACCTGGTCCACCTCTTGCCATATTTTTGCCCTGACACTCTGGATGGCCGAACAAAGACACCACACACCAACC
CAACGCTGGGAGTCGCTGTATTAATAGCCAGCCACCAATAAATCTTGAGTGGAATGAATGGAGCTGGTCATCCTATAACA
CATTTATTATTTGCATTGGTGGCGGAGTGGGTTATTCCTTTCGGCGGGTAATAGTTGGGGCAGTTTTTAATGGGCACCGG
GCGCGGGCCCTCT

>GCiWno329_m07.b1_4
RARARCPLKTAPTITRRKE*PTPPPMQIINVL*DDQLHSFHSRFIGGWLLIQRLPALGWC
VVSLFGHPECQGKNMARGGPGYR*VYLERLQGSVFLSYKLLSFIQALLFLHLC*NYVKNG
TGKT**KYVPYNPTLLFSRAVENGHL*HILSKYPSRVLNK*QWLMYKS*VGLYTVYNSMN
VFCLLPNGTRK*NKKCPIFPHPYCIKKKLP**VKQKEVIMLCSEIEHQANILW*MPLRY*
VFGPGRCSITANRY*PDCCAIGFLY**FIFT*TSI**GGGRRDTFSFHFLLSFGFKQ
>GCiWno329_m07.b1_5
EGPRPVPIKNCPNYYPPKGITHSATNANNKCVIG*PAPFIPLKIYWWLAINTATPSVGLV
CGVFVRPSRVSGQKYGKRWTRLSVSLFGTVTRISISKLQTTEFYTSFIVFAPMLKLCKKW
DGKNIMKICPI*PHTTI**GG*KRAPLTHTI*IS*SRFKQITMAYV*VVSRPIYGL*LYE
CFLFTTKWDEKIE*KVSHLPPPLLYKKKVAMIG*AKRGNNAM*RNRTSSEYFMVNAVTLL
SVWSWTLFYNGQSLLTRLLRYRLPLLIIYIHVNKHIVGWGKAGHLFIPFSPLIWF*TX
>GCiWno329_m07.b1_6
RGPAPGAH*KLPQLLPAERNNPLRHQCK**MCYRMTSSIHSTQDLLVAGY*YSDSQRWVG
VWCLCSAIQSVRAKIWQEVDQVIGKFIWNGYKDQYF*VTNY*VLYKLYCFCTYVKIM*KM
GREKHNENMSHITPHYYLVGRLKTGTFNTYYLNILVAF*TNNNGLCISRK*AYIRFITL*
MFFVYYQMGRENRIKSVPSSPTLTV*KKSCHDRLSKKR**CYVAK*NIKRIFYGKCRYVI
KCLVLDAVL*RPIATDQTAAL*ASFINNLYSRKQAYSRVGEGGTPFHSIFSSHLVLNX

>GCiWno59_m08.g1
CTGGCCTTCGCTTACTGTAATATTCTACTACTATCATTATTACCTCTTTTTGCTTAACCTATCATGGCAACTTTTTTTTT
ATACAGTAAGGGTGGGGGAAGATGGGACACTGTTTATTCTATTTTCTCGTCCCATTTGGTAGTAAACAAAAAACATTCAT
AGAGTTATAAACCGTATATAGGCCTACTTACGACTTACACATAAGCCATTGTTATTTGTTTAAAACGCGACTAGGATATT
TAGATAGTATGTGTTAAAGGTGCCCGTTTTCAACCGCCCTACTAAATAGTAGTGTCGGGTTATATGGGACATATTTTCAT
TATGTTTTTCCCGTCCCATTTTTTACATAATTTTAACATAGGTGCAAAAACAATAAAGCCTGTATAAAACTCAGTAGTTT
GTAACTTAGAAATACTGATCTTTGTAACCGTTCAAAATAAACTTACCGATAACCTTGTCCACCTCTTGCCATATTTTGTC
CTGACACTCTGGATGCCGAAGCAAAGACACAACACACCAACCAAACGCTGCAGTCGTTGTATTAATAGCAGCTACCAATA
AATCTCGAGTGTAATGGTGGAGTTGCTCATCCTATAACACATTTATTTTTGTATTGTGGCGTATTGCTTATTCTTTTGCT
GNTATATGTTTGTAGTTTTTTATGTGTAGTTTGCTGTGCCGTCCTGTCGTATTGGTTAAATTGAACGAATGAACACAATG
TAAGTTGTTTACCACGCGTGGCGAGGCCACAACAGTCGTTATAACGCGGGGCTTTCTTGATTCAAATATCTCCGTGCCAG
CGGCCGCGAACTATTGTGCCCGCGGG

>GCiWno59_m08.g1_4
PRAQ*FAAAGTEIFESRKPRVITTVVASPRVVNNLHCVHSFNLTNTTGRHSKLHIKNYKH
IXAKE*AIRHNTKINVL*DEQLHHYTRDLLVAAINTTTAAFGWCVVSLLRHPECQDKIWQ
EVDKVIGKFILNGYKDQYF*VTNY*VLYRLYCFCTYVKIM*KMGREKHNENMSHITRHYY
LVGRLKTGTFNTYYLNILVAF*TNNNGLCVSRK*AYIRFITL*MFFVYYQMGRENRINSV
PSSPTLTV*KKSCHDRLSKKR******NITVSEGQ
>GCiWno59_m08.g1_5
PAGTIVRGRWHGDI*IKKAPRYNDCCGLATRGKQLTLCSFVQFNQYDRTAQQTTHKKLQT
YXSKRISNTPQYKNKCVIG*ATPPLHSRFIGSCY*YNDCSVWLVCCVFASASRVSGQNMA
RGGQGYR*VYFERLQRSVFLSYKLLSFIQALLFLHLC*NYVKNGTGKT**KYVPYNPTLL
FSRAVENGHL*HILSKYPSRVLNK*QWLMCKS*VGLYTVYNSMNVFCLLPNGTRK*NKQC
PIFPHPYCIKKKLP**VKQKEVIMIVVEYYSKRRPX
>GCiWno59_m08.g1_6
RGHNSSRPLARRYLNQESPAL*RLLWPRHAW*TTYIVFIRSI*PIRQDGTANYT*KTTNI
XQQKNKQYATIQK*MCYRMSNSTITLEIYW*LLLIQRLQRLVGVLCLCFGIQSVRTKYGK
RWTRLSVSLF*TVTKISISKLQTTEFYTGFIVFAPMLKLCKKWDGKNIMKICPI*PDTTI
**GG*KRAPLTHTI*IS*SRFKQITMAYV*VVSRPIYGL*LYECFLFTTKWDEKIE*TVS
HLPPPLLYKKKVAMIG*AKRGNNDSSRILQ*AKAX

>ciht008o06 3 aa diffs
          Length = 696

 Score =  115 bits (284), Expect = 1e-25
 Identities = 53/56 (94%), Positives = 54/56 (95%)
 Frame = +1

Query: 1   NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLANQHTSDMW 56
           NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLA  HTSD+W
Sbjct: 76  NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLAILHTSDIW 243

>ciht008o06
CNGCACGAGGCCCAAGCCTACCATGCGTTTTTATTTAAATCAGGCAACGAAACTCCCAGTTGCAAGCACCAAGAAAACAT
GCCGTACATGCGCTCGTTTATACAAGAAATACACCGGCACCGATCCATTGCAACGCTGAATCTGCCTCATCGAACTGTTC
GAAGCGTGCGACTGTGCGGTTATGACATTCCTAAAGATACTCCAGTAAGTACATTGGCCATTCTGCACACATCAGACATA
TGGGTTTACCTTATGTGTTTTTCTAAATTCGCAGCCAGACCTTCATGGGCGAGAAAAATCGCCCATGAAGGTATATAAGT
GGTAACTCGTATAAGCGGACATGATATGTAGGACAGAACGCCTCTGTTTTGGAGACTGGCGTTGCCCTGTCAGGCTAGGA
TAAATAAGTTACATTAATAATGATATATATAATAAAGTATAACATGTACGTTTTGTGCTTAATTCTAACATAGGTACTTA
CCAACATTTGGAGGGTCCACAATAATCAAAATGTTTGGAAAAATCCACACGAGTTTCGACCCGATCGTCATCTTGACGGC
AACGGCAATTTCGTCTCATCTAACAACGTCATTCCTTTTGCATGTGGTTATAGGCGTTGTTTGGGCGAGCAAATAGCCAA
AGCAGAGATATTTCTTTTTATAGTAAATATTGTCAAACGGTTTCACTTGGTAGTGG

VLTNIWRVHNNQNVWKNPHEFRPDRHLDSNGNFVSSNNVIPFACGYRRCLGEQIAKAEIFLFIVNIVKRFHLVV

>GCiWno582_d02.b1 CHROMAT_FILE: GCiWno582_d02.b1 PHD_FILE: GCiWno582_d02.b1.phd.1
           CHEM: term DYE: big TIME: Wed Oct 24 12:56:49 2001
           TEMPLATE: GCiWno582_d02 DIRECTION: fwd
          Length = 880

 Score =  121 bits (300), Expect = 2e-27
 Identities = 55/56 (98%), Positives = 56/56 (99%)
 Frame = -1

Query: 1   NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLANQHTSDMW 56
           NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLANQHTSD+W
Sbjct: 310 NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLANQHTSDIW 143

>GCiWno582_d02.b1
CATCATATGTATGGCNNCTGCAGGAATCGACTTCTAGAGGGATCCCCATACGAGTTACCACTTATATAACTTCATGGGCG
ATTTTTTTGGTTATTTTTGTTCAACGTCTGGCTGCGAATTTAGAAAAACACATAAGGTAAACCCATATGTCTGATGTGTG
CTGATTGGCCAGTGTACTTACTGGAGTATCTTTAGGAATGTCATAACCGCACAGTCGCACGCTTCGAACAGTTCGATGAG
GCAGATTCAGCGTTGCAATGGATCGGTGCCGGTGTATTTCTTGTATAAACGAGCGCATGTACGGCATGTTTTCTTGGTGC
TTGCAACTGGGAGTTTCGTCGCCTGATTTAAAAAATAAAACTTACAGTAGGCTTGGGGAAGACGGTGCGCCTTTAGCACA
TAATATCCTAATTGTGTTTTTAAACAATTAACAACGGTCTATGGGGGTCGTGAGGATACGGTTTTTATAATTCTTTGAAT
GTTCTTTGTTTAAAACCAAATGAGAGGAGAAAATGGAATGAAAAGGTGTCCCGCCTTCCTCTACTATACTTGTTTACGTG
ATTAAATTATTAATAAAGTAAGCCTATACGCCTACAGCAGTCTGGTCAGTGGCGATGGGCCGTTAAAACAGCGTTTAGGA
CCAAACACTTAAAGTAAAGGTATTTACCATAAAATATTCGCTTGATGTTCTATGCTACTACATAGCATTATTACCTCTTT
TTGCTTAACCTATCATGGCAACTTTTTTTTATACAGTAAAGGTTGGGGGAACATGGGAACACTGTTTAATTCTATTTTTC
TCGGCCCATTTGGGCAGTAACACAAAAAACTTTTCTTAAGAGTTATAAAACCCGTATTATAGGCCTCACTTTACCACTTT
>GCiWno582_d02.g1
TACGAATTCGAGCTCGTACCCAGAGTTCTTTTTATACCAAATGGGTCGAGAAAATAGAACGAAAACATGTCCCATATTAC
CCGACTCTATATCTTGTATTTTCAAATGAATCTACGATTTATTTACATCAGTATATAGCGTTACCCTACTGTTCTACTGT
GTTAAGGCAATCTAAATAAAATAATGTTTATACAGACTCTCTTTCGGAAAGCAGTAACTAATGTCACATGCTCCGTTCTA
ATGGGAAAACGATACGACTACGACGATCCAGTTTTGAACAATATTACAGAACATATAAGGTAACTGAACCACTTTTTATA
CGCGATGGACATGCTTTACCCAATTGATGAAAGGATAAACACATACATTTCCAACGTATGCTTGAATATAATATAGTACT
GTGGGGTACCGTACCTCCTAAATCCCATATTTCATGATCGTGTTTTACCTATTAACAACGTTATTAAAGTCGTCAAGACA
CGGTTATGTAATTTTGTAACACATTGTGTTTACTACCAAATAATACATTGTGTTTACTACCAAATAATACATTGTGGTTG
CTACCAAATGAGACGAGAAAAGAGAATGAAAACTTGTCCCGTCTTACCCAACTGTACATACTAACTTTTTCATGTATGTC
ATAATACGCAGACCGAGTAAAACAGTCGTCATGTACTCACCGATTCTTCGGTTTATCCCGCCTTTCCGTTGGACATACAA
GAAGATAGTAAACAGCATTGAACAGGTTACAGGTATAACTGATATAATACATGTTAATGCTGTCTATAATTTGGTTTAAT
CCTGTACTGTATGCTCACGTGTTAAAAATCGTTCGAAAAATATATATCCAAATATATTAATAATAGTCTACATATGAATA
TANTACCATAAGGACCACTAGTGCAGTAATACCCTGTAGTGCTGGACTG
LQW173019.y2 
LQW173019.y2.phd.1 LQW173019.x1 

           11:47:54 2001 TEMPLATE: LQW173019 DIRECTION: rev
          Length = 992

 Score =  122 bits (304), Expect = 3e-28
 Identities = 56/56 (100%), Positives = 56/56 (100%)
 Frame = -3

Query: 1   NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLANQHTSDMW 56
           NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLANQHTSDMW
Sbjct: 273 NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLANQHTSDMW 106

>LQW173019.y2
>lcl|LQW173019.y2 CHROMAT_FILE: LQW173019.y2 PHD_FILE: LQW173019.y2.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 11:47:54 2001 TEMPLATE: LQW173019 DIRECTION: rev 
ACTAAGCCTGTCCATACGAGTACACTTATATACTTCATGGGCGATTTTTTTGGTTATTTTTGTTCAACGTCTGGCTGCGA

ATTTAGAAAAACACACAAGGTAAACCCACATGTCTGATGTGTGCTGATTGGCCAATGTACTTACTGGAGTATCTTTAGGA

ATGTCATAACCGCACAGTCGCACGCTTCGAACAGTTCGATGAGGCAGATTCAGCGTTGCAATGGATCGGTGCCGGTGTAT

TTCTTGTATAAACGAGCGCATGTACGGCATGTTTTCTTGGTGTTTGCAACTGGGGGTTTCGTTGCCTGATTTAAATAAAA

ACGCATAGTAGGCTTGGGGAAGACGGTTGCGCCTTTAGCACATAATATCCTAATTGTGTTTTTAAACAATTAACAACGGT

CTATGGGGGTCGTGAGGATACGGTTTTTATAATTCTTTGAATGTTCTTTGTTTAAAACCCAATGAGAGGAGAAAATGGAA

TGAAAAGGTGTCCCGCCTTCCCCTACTACATACTTGTTTACGTGATTAAATTATGAATAAAGTAAGCCTACGCCTACAGC

AGTCTGGTCAGTAGCGATTGGCCGTTATAGAACAGCGTCCAGGACCAAACACTTAATAACGTAACGGCATTTACCATAAA

ATATTCGCTTGATGTTCTATTTCGCTACATAGCATTATTACCTCTTTTTGCTTAACCTATCATGGCAACTTTTTTTATAC

AGTAAGGGTGGGGGAAGATGGACACTTTTATTCTATTTTCTGGTCCCATTGTAGTAACAAAAGCTCATGAGTATAACCGT

ATTAGCCTATAGAATAATAAAAGCATGGTATTGTTAAAAGGATGGCATAGGATGAGTGTAGAGCGTTTCAGGCTAAAAAA

AGGGGGTATGACATTGGAGGTACGCAATAGAACTTCTGGAAACAACGATACGGTGTAAGGTGAAAAAAAAGTCAGTTTGA

GTGAAACTCTTCTGGTTTTTTGATTGTTNNGN

>LQW173019.x1
>lcl|LQW173019.x1 CHROMAT_FILE: LQW173019.x1 PHD_FILE: LQW173019.x1.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 11:24:41 2001 TEMPLATE: LQW173019 DIRECTION: fwd 
GGCACACGTTGCCATACTTAAGGTGGTAGCCACTACAAGGAGTGCCCCGTGTATAGTGCTGAACACGAACGTATATCAGC

TAGTTCTCTATCATAACCACCACTGTGGTCGCGGCAAACATCAGAATGCACAACAAATGGTTCCCATCATTCAACCCACA

CGTCTCATATCCTATGGTCATATAAATATACCAAACTGGACATCCTACAGCATATCAATTTCACCATACCAACAATCATC

ACCATATTAAACCCCTCAATATAGATTCATCAATATGAATGCTAAACAAATGCCACAGTACCTAGCACAATCATACACAC

ACCACACTCGATCCATCCTCAACACAAGCAACATACCAATCCTAATGACCTCAGACACACCAACCACCAACGTCACAACA

ATACATAATATAGATCACAACACAATAAGTCATTACCGCCTGCACAATACACCTCACCAACTTGTTGTAGCCACAATACT

ACATAGCAGATCACACTACGCTACCNATACCAACTACACAAACATAGCGCAATTCCACGCTACAGGTCCCAACTTATAGG

CGACCACCACACACAATTCCACTTATTACAACACCATCAGCAACAAACACAAATACAAATACACTATCGATGATACATAG

AGCACTATAGCGACAAATACACCAACCATACATATGATCATCCAACTACAACCATGACACAGACAATATAGATAGCCACA

CACAATATAGGCACATATACTACACCACTCACACACCAAATGACTAGACAGTCTGCCACCACCTAAGTGGCGATTACCAC

ATCACACAACACACACCAATACCTAACTCAACTCATACATACTACCCATACATANCACGCACTTACAGATCTGAGACGCT

CACTGCGTACCACCAAATCATACTCATAACCCATCACAACTTAACAATCGATAAACACACAATTGACCAGATCGACGTAA

AGATATTACAACACCAGTAATTAAAACACACTACTACAACCGATCTATACACACAACATTACACCACCAACATTTACAAC

ATATTATTATCCTACATATGAGAACACACTACCCGAGCCATAGTCAGCTTCATAATCATCATCAACCAGCCAATTAACAA

TTACTGTCATCTGACACCAGACACATACGGCACTATCACTCACGCTACTCTGACACACACACATCAAACTACATGGACTT

ACAACACAAAAGTGCACAACACATAACCAGCGAGACATCATTACACATTAGAGTTACACACACAATACTAATAGTTATGT

GTTACACAAATCTAAGACCAACACTACATGAAATATGATCTATACAAACACCAATATACCTACCAACCACTAGACCTATT

ACACAATATCAACACAGACTAAATGCGCTAGACAATAATATACAGCAACTAAACCACACAAACAAACAACAACAAACTAC

ACACAACAACAAGTACATAAAGACATAATAACCACTAACCTCCACACACACACATGTAATGCACACCCAGTACAAGACAA

CCAAACACACAACCATACACATTAGACGACACAACACACACATACTAAATATCACACCACAGAACAAATATTAACAACAC

ACACAACACAACACAATAGAATAACACACATACACACTCTCAAGACCAACTATCATTAACTCAACATAGGAATTACATTG

GTCTACCACTCAGCACATTCACAAGACAACTACGAACACCATCACCGCTATACACAACCAATCACAGCATACAGGACACT

ACCGTACTTCACCATCCACACGCACTACATCATTCCTTCATCCATGAGAATCATACTACACGACTAGCCCACTTCATACA

AAGTCTAACTGCAACAATACACAACCAGCCAACAACTCACTATAACAACACATCAACATATATCCAACCAACAATCAAAC

ACCAGTACTCATACACACTCACCACAAACACTATACCCTCTATAGACAGCAACACCATAACTACACATATCAAGACAATC

AAAATCCCCATACACCCACAACACAAGACCAACCAAGCTAATTCAACACATCCGCACGCACCACACCACCAAATACATAA

ATAACCACAATAAAATAATACTAATAAACAACAATCAACCATACATATCATCAACAACCACAAGCACCCACAC

LQW18289.x1 
LQW18289.x1.phd.1 LQW18289.y1 

          15:50:36 2001 TEMPLATE: LQW18289 DIRECTION: fwd
          Length = 292

 Score =  121 bits (300), Expect = 9e-28
 Identities = 55/56 (98%), Positives = 56/56 (99%)
 Frame = +3

Query: 1  NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLANQHTSDMW 56
          NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLANQHTSD+W
Sbjct: 36 NMPYMRSFIQEIHRHRSIATLNLPHRTVRSVRLCGYDIPKDTPVSTLANQHTSDIW 203

>LQW18289.x1
>lcl|LQW18289.x1 CHROMAT_FILE: LQW18289.x1 PHD_FILE: LQW18289.x1.phd.1 CHEM:
term DYE: ET TIME: Wed Mar 21 15:50:36 2001 TEMPLATE: LQW18289 DIRECTION: fwd 
GCAGTGCCGAAACTCCCAGTTGCAAGCACCAAGAAAACATGCCGTACATGCGCTCGTTTATACAAGAAATACACCGACAC

CGATCCATTGCAACGCTGAATCTGCCTCATCGAACTGTTCGAAGCGTGCGACTGTGCGGTTATGACATTCCTAAAGATAC

TCCAGTAAGTACATTGGCCAATCAGCACACATCAGACATATGGGTTTACCTTATGTGTTTTTCTAAATTCGCAGCCAGAC

GTTGAACAATAATAATCAAAAAAATCGCCCATGAAGTTATATAAGTGGTAAC

>LQW18289.y1
>lcl|LQW18289.y1 CHROMAT_FILE: LQW18289.y1 PHD_FILE: LQW18289.y1.phd.1 CHEM:
term DYE: ET TIME: Wed Mar 21 15:50:54 2001 TEMPLATE: LQW18289 DIRECTION: rev 
GGCCACACACATAAATTGAAGCATACGAACATGAGAGTCACTTTTATATCAACCCAGGCAGCATAACAGGTGCCTTTTCA

CCAACTGCAAGGTAAGACATTAGCCTATTGATTTTTATTGAGCATATTGATACTAGCACTTTTATTGACAAAGTCCTGTT

TACTTTATTGCAAGTTAAAATACTAGCATACTTATGAATGAATGTAACTTACTTTATCCTTGCTTGGTAGGAGCACGACA

GTTGTTATAACACAGGTGTTTATACACCTCGTACCACCTTATGAGTTACCATGTATGTTACTTTGTGTTTTTTGGGGGGG

ATTTCGTTTATGTTTAACTGATAATTTGTACACCACTTTAGTAACCACTGGGTTGGAGCAATTGTCGTATGTGTCTTACC

CAGGACACATACGCCCACAATGGTAGCAGCGACGAGGCCTGAACCCAATAAACTTAACGGCAATTGCTTCAACCCAGTGG

TCACAAATGGGTTTTTCAAATTATCAGCCATACATAAAAAAATAAAAAAAAATATTCTCCCATGAAGTAACATACATGGT

AACTCGTAAGCTTGCATGAGATGTATGAAACAGAACACCCGTGTTACAACGACTGTTGTTTTCCGGCCACGCAAAGATAA

AGTAATTATATTCATTATACATTCATATTTTCAGTG

>sequence 13, 55, 80 46% to 2C8 The C-terminal parts match for 13 and 55 but not the I-helix region.   This is a different gene
ITAGQRFEYDDQFFIQIRRHLWFMDPDRTAAFSAMVFVPLLCHIPPYRKKYEQIKQDTKE
MMGLFQQLVDQHRKTFDKNNLRDFIDAFILENENGTDESFT
DSLICKDRQLVHYVRELFKAGTETSTGTLRWAMLCLIHYPGAQEK
IRKEIFDVLGNSTFPSMSDRNAMPYTSAFIQEVFRFRTLAPLGVPHKTTDTVNFANYIIPKG
TTILSNLWAVHNDPTVWNNPRQFKPERHIDDKGKYVQSNHVIPFSVGPRHCLGEQLARMEIFIFLV
SMVQKFEFLPDPNKTDLPELDDGVNGVAFVPYPFKLVAKEI*

DEV1691.y1 
LGJ489.y1
LQW217248.x2
LQW193647.x1

>cibd060b13 
          Length = 512

 Score =  131 bits (325), Expect = 4e-30
 Identities = 64/69 (92%), Positives = 65/69 (93%), Gaps = 3/69 (4%)
 Frame = +3

Query: 7   DRQLVHYVRELFKAGTETSTGTLRWAMLCLIHYPGAQEKIRKEIFDVLGK---PSMSDRN 63
           DRQLVHYVRELFKAGTETSTGTLRWAMLCLIHYPGAQEK+RKEIFDVLG    PSMSDRN
Sbjct: 306 DRQLVHYVRELFKAGTETSTGTLRWAMLCLIHYPGAQEKMRKEIFDVLGNSTFPSMSDRN 485

Query: 64  AMPYTSAFI 72
           AMPYTSAFI
Sbjct: 486 AMPYTSAFI 512

>cibd060b13
ACATTACGGCTGGACAACGGTTTGAATACGACGATCAGTTCTTTATACAAATTCGACGACATTTATGGTTTATGGATCCG
GACCGAACCGCTGCGTTTTCTGCTATGGTGTTTGTCCCGTTACTGTGTCACATTCCACCTTACCGTAAAAAGTACGAGCA
GATAAAGCAAGATACGAAAGAAATGATGGGCCTGTTTCAGCAACTGGTCGACCAGCATAGGAAAACCTTCGACAAAAATA
ATCTACGGGATTTCATCGACGCTTTTATTCTGGAGAATGAAAATGGGACTGACGAAAGTTTTACGGACCGACAGCTTGTA
CATTACGTACGTGAACTCTTCAAAGCTGGTACTGAAACTTCTACGGGTACTCTTAGATGGGCGATGTTGTGTCTCATTCA
CTATCCTGGAGCACAGGAGAAAATGAGAAAGGAAATATTTGACGTCTTAGGCAATAGCACTTTTCCCAGCATGAGTGATC
GTAACGCGATGCCATACACTTCCGCGTTCATA

>cibd060b13_3
ITAGQRFEYDDQFFIQIRRHLWFMDPDRTAAFSAMVFVPLLCHIPPYRKKYEQIKQDTKE
MMGLFQQLVDQHRKTFDKNNLRDFIDAFILENENGTDESFT
DRQLVHYVRELFKAGTETS
TGTLRWAMLCLIHYPGAQEKMRKEIFDVLGNSTFPSMSDRNAMPYTSAFI
QEVFRFRTLAPLGVPHKTTDTVNFANYIIPKGTTILSN 
LWAVHNDPTVWNNPRQFKPERHIDDKGKYVQSNHVIPFSVGPRHCLGEQLARMEIFIFLV
SMVQKFEFLPDPNKTDLPELDDGVNGVAFVPYPFKLVAKEI*


>rcibd060a13 
          Length = 765

 Score =  112 bits (277), Expect = 7e-25
 Identities = 53/54 (98%), Positives = 53/54 (98%)
 Frame = -2

Query: 9   LGNSTFPSMSDRNAMPYTSAFIQEVFRFRTLAPLGVPHKTTDTVNFANYIIPKG 62
           L NSTFPSMSDRNAMPYTSAFIQEVFRFRTLAPLGVPHKTTDTVNFANYIIPKG
Sbjct: 764 LXNSTFPSMSDRNAMPYTSAFIQEVFRFRTLAPLGVPHKTTDTVNFANYIIPKG 603

>rcibd060a13
TGTGTTGTATTTAAAACTGCGACTTGTATATATTTATTAGACTCACAGCAAAACACGGCAATAGAAAAAGACAGTAACAC
TTATATAGAATAGAACGTATTGCATTTGGAAATATGCGACTTAAAGGGGTATACCAACGAAAATCCAAAATTTGTAAATG
TGTAGAGATGCTCAAATGTGGTAAAAACTACCACCTAAGTTTCAAAAAACAAAATACTTCAAAAAAATAAAAATTTTGAT
TTTTCGTTGTTATGCCATTTGAAGAACAAGAAATTTCGCTAAATTTCTTTAGCGACCAATTTAAACGGATAAGGCACAAA
CGCTACACCATTAACCCCATCATCCAATTCTGGAAGATCTGTTTTGTTCGGATCGGGAAGAAACTCAAACTTCTGAACCA
TTGAAACCAGAAAGATGAAAATTTCCATTCTAGCTAGTTGTTCTCCCAAGCAATGACGTGGACCCACTGAGAAAGGTATT
ACGTGATTCGATTGAACATATTTTCCTTTATCGTCAATGTGGCGCTCAGGTTTAAATTGACGTGGGTTGTTCCATACAGT
AGGATCGTTGTGCACTGCCCATAAGTTTGATAAAATCGTGGTTCCTTTTGGAATAATATAGTTAGCAAAGTTGACAGTGT
CTGTTGTCTTGTGTGGAACCCCTAACGGAGCTAACGTTCGAAACCGAAACACTTCTTGTATGAACGCGGAAGTGTATGGC
ATCGCGTTACGATCACTCATGCTGGGAAAAGTGCTATTGNCTAAG

NSTFPSMSDRNAMPYTSAFIQEVFRFRTLAPLGVPHKTTDTVNFANYIIPKGTTILSN
LWAVHNDPTVWNNPRQFKPERHIDDKGKYVQSNHVIPFSVGPRHCLGEQLARMEIFIFLV
SMVQKFEFLPDPNKTDLPELDDGVNGVAFVPYPFKLVAKEI*

>sequence 14, 37, 69 25 accessions 50% to 2C8
MLPSGYIFVFVFLCIYYLLQWRRRPKNFPPGPLGIPLFGIA
PFAGVDMHKYLATYYAKYGGVMSFRLATKDWIVLNDIEAITQ (0)
ALLKQGESFSGRPQSYLMNQLTEGCGIVFSTGPRWQAQRRFVLTALKT (2) (C-helix)
LGMGKRSTMVGIINEENQNFLSVIQSSGGKVNIL (0)
SEFRKLLSNIVSNLIMGKRFNYEDEKLQAIVDHR (2) 
PTSSVVMFIPFLRFIPPFKQGYQRLIASTQRVL (1)
DIISEITEEHKNSFDENNLRDFIDIFLLEMKRRNSEYFT (0) 
ELQLLHLVRDLFVGAIDTTTATLGWGIICLLHYPECQVRIQEEIDDVI (1) 
GCAEPDMSHHESMPYLRAFIQEVHRFQTIAPLNIPHCVTEDCVLFGYHIPKS
TPVMSNIWRVHNDPKYWENPEKFSPERHLDSEGRFVPSNRVLSFAVGHRSCLG
VQLARVELFLFYASTLKKYEFQIDPEYGLPDWSNDRSGTVKTPKKFSVLLKSR*
LQW4880.y1    exon 1 opposite = LQW4880.x1 (exon 6)
DEV1604.y1    exon 1 opposite = DEV1604.x1 ?
LQW232493.y1  exon 1 opposite = LQW232493.x1 (exon 7)
LGJ1425.x1    exon 1 opposite = LGJ1425.y1 (exon 7) 
LQW269127.y1  exon 2 opposite = LQW269127.x1 (exon 7)
LQW48810.x1   exon 2 opposite = LQW48810.y1 (exon 2)
LQW48810.y1   exon 2 opposite = LQW48810.x1 (exon 2)
DEV27943.y1   exon 2 opposite = DEV27943.x1 (exons 8,9 fused)
LQW265377.x1  exons 2 and 3 opposite = LQW265377.y1 (exons 8,9)
              exons 4 and 5 are missing
LQW37658.y1   exon 6 opposite LQW37658.x1 ?
LQW98270.x1   exon 6 opposite = LQW98270.y1 ?
LQW160072.x1  exon 6 LQW160072.y1 (C-terminal and 3 prime UTR)
LQW160072.x2  exon 6 LQW160072.y1 (C-terminal and 3 prime UTR)
DEV47237.x1   exon 6 no opposite
LQW4880.x1    exon 6 opposite = LQW4880.y1 (exon 1)
DEV55412.x1   exon 7 opposite = DEV55412.y1 ?
LQW232493.x1  exon 7 opposite = LQW232493.y1 (exon 2)
LQW103809.x01 exon 7 opposite = LQW103809.y1 ?
LQW103809.x1  exon 7 opposite = LQW103809.y1 ?
LQW269127.x1  exon 7 opposite = LQW269127.y1 (exon 2)
LGJ1425.y1    exon 7 seq 14 opposite = LGJ1425.x1 (exon 1)
LQW231417.x1  exons 8,9 fused opposite = LQW231417.y1
LQW265377.y2  exons 8,9 fused opposite = LQW265377.x1 (exons 2, 3)
DEV27943.x1   exons 8,9 fused opposite = DEV27943.y1 (exon 2)
LQW160072.y2  exons 8,9 fused opposite = LQW160072.x1 (exon 6)
GCiWno663_c10.b1 ex 3, 4

Probable savignyi ortholog to exon 4
DEIRRLQANNTCNFLSGKHFDYKDKRLQAIIDHR (2)

Two candidates for exon 4 in intestinalis

XEIRRLEANIISKVLIGKRFDYTDERLNSIIDCR GCiWno350_k07.b1 related seq
SEFRKLLSNIVSNLIMGKRFNYEDEKLQAIVDHR GCiWno663_c10.b1 this is it

>GCiWno663_c10.b1
TTCTCGTCTATTTTTTTCTTTCATTCTATTATTCATTTTGGTAGTAAACAAAGAACATTCAAGGAACTATGAAACCTTGT
CCTCGCGACTTTCATAGACCGTTGTTACTTGTTTAAAACACGACCAGGATATTTATATATTTTATGCTAAAGATGTCCCA
TCTTCCCCCACCCCACTATATATATTTACCATTTTTTAGTCTAGGAATGGGAAAAAGAACCATGGTCGGAATTATAAACG
AAGAAAACCAGAATTTTTTATCCGTAATACAATCTTCTGGAGGAAAGGTTAACATTTTGGTAAGCCATATTTTTTTATTG
GTACACGTCCTTTTATTTTTAACGTTATATGCATTTCTTACTACAGTCTGAATTTCGGAAACTCCTGTCGAATATTGTTA
GTAATCTGATAATGGGAAAGCGTTTTAACTACGAAGACGAGAAGTTGCAAGCTATTGTGGATCATAGGTAATAAATGATA
TAACTTAACCATGCAAGGTATAAAACTGCAAAGTGCCATTATATATAGCTGGGGGTGGGGGAAGATGGGACCCCNNNNGC
NCANNNNATCCANNNNTCCCTGACCGCCGCCCGAACCAANCCCACAACCGCCCCATGGGAGCCCGCGACAACACCGGCGC
ACCACCCACTCGACCCNCGCGCCCCACCACGAGACCACACCACACGCAAAGGGGCCCCACCCTTCCCTTCCCTCCTTTCT
ATCACTCTCCCTCTTTTCCCCACTTGGTCTACTCATTTTTATCTCTTCTTTCTCTCCCCTCATTTCTTACCCCCCCTGTC
CTGCCCGTCCACACGCCCCCCCCGTTTGCCTAATTTTTGTCTCGCTCTTCTTCCACTCTCTTACCGCGCTTCCCACTCAA
TCCCN

>_1
FSSIFFFHSIIHFGSKQRTFKEL*NLVLATFIDRCYLFKTRPGYLYILC*RCPIFPHPTI
YIYHFLV*EWEKEPWSEL*TKKTRIFYP*YNLLEERLTFW*AIFFYWYTSFYF*RYMHFL
LQSEFRKLLSNIVSNLIMGKRFNYEDEKLQAIVDHR**MI*LNHARYKTAKCHYI*LGVG exon 4
EDGTPXAXXIXXSLTAARTXPTTAPWEPATTPAHHPLDPRAPPRDHTTRKGAPPFPSLLS
ITLPLFPTWSTHFYLFFLSPHFLPPLSCPSTRPPRLPNFCLALLPLSYRASHSIP
>_2
SRLFFSFILLFILVVNKEHSRNYETLSSRLS*TVVTCLKHDQDIYIFYAKDVPSSPTPLY
IFTIF*SRNGKKNHGRNYKRRKPEFFIRNTIFWRKG*HFGKPYFFIGTRPFIFNVICISY
YSLNFGNSCRILLVI**WESVLTTKTRSCKLLWIIGNK*YNLTMQGIKLQSAIIYSWGWG
KMGPXXXXXSXXP*PPPEPXPQPPHGSPRQHRRTTHSTXAPHHETTPHAKGPHPSLPSFL
SLSLFSPLGLLIFISSFSPLISYPPCPARPHAPPVCLIFVSLFFHSLTALPTQS
>_3
LVYFFLSFYYSFW**TKNIQGTMKPCPRDFHRPLLLV*NTTRIFIYFMLKMSHLPPPHYI
YLPFFSLGMGKRTMVGIINEENQNFLSVIQSSGGKVNILVSHIFLLVHVLLFLTLYAFLT exon 3
TV*ISETPVEYC**SDNGKAF*LRRREVASYCGS*VINDIT*PCKV*NCKVPLYIAGGGG
RWDPXXXXXPXXPDRRPNQXHNRPMGARDNTGAPPTRPXRPTTRPHHTQRGPTLPFPPFY
HSPSFPHLVYSFLSLLSLPSFLTPPVLPVHTPPPFA*FLSRSSSTLLPRFPLNP

Try to use savignyi to close gap and find exon 4
>scf/ciona01/G126/seq_dir/hrs/G126P69589F.T0/G126P69589FF10.T0.seq    724
            0    724  ABI
            Length = 724

  Minus Strand HSPs:

 Score = 175 (61.6 bits), Expect = 3.7e-13, P = 3.7e-13
 Identities = 34/34 (100%), Positives = 34/34 (100%), Frame = -1

Query:    34 RPTGTIVVFLPFLRFIPPFKQKFQKMVDSTEQVI 67
             RPTGTIVVFLPFLRFIPPFKQKFQKMVDSTEQVI
Sbjct:   427 RPTGTIVVFLPFLRFIPPFKQKFQKMVDSTEQVI 326

>scf/ciona01/G126/seq_dir/hrs/G126P69589F.T0/G126P69589FF10.T0.seq    724      0    724  ABI
TTGAATATCGCCCTGTGGTGGAATTTTCAATTACATTTTGTAAAGAACCG
TATTTTATCATATGTTAGTAAAAAATCACCGCGGACAGTGCTGGTCTGTG
GACCTGCGTTTGAGAATCACCAGTTTAGAAAGCCAAGGCTCGCTTTTCTA
GCTTAAGAGCAAATCTCATCCCAACAAATCCCTTTCATTGTACATTTGTA
CAACTACCACGAAATTCATATTATTAGATCGGGCATATTTACAGACAATA
GCATAAAGAGGGTATAAAGCTTGGCAGGAGAAATAGATGACTTGCCACGG
TTTTAATAACAATTTTAACAATACCTATGACTTGCTCTGTGCTGTCCACC
ATTTTTTGAAATTTTTGTTTGAAGGGTGGTATGAATCGAAGAAACGGCAA
GAAAACAACAATGGTACCGGTAGGCCTGGGAACACATTGGCGAATTTGTA
TAAAGTAGTAATATTCCTGTAACGTTAAATGTCATGTCTGTCATTTAAAG
GTAATTATTAGGAATATTAAATAAGACTTGTATGGCGAATTTGTATAAAG
TAGTAATATTCCTGTAACGTTAAATGTCATGTCTGTCATTTAAAGGTAAT
TATTAGAAATATTAAATAAGACTTGTATATTGTATCGCCTTTAGCAATAT
ATANAACGGAATGTTAGTGTATGCTTCCATACCTGTGGTCTATAATCGCT
TGTAAATCTCTTATCTTGTAGTCA


>_1
LENYDLLVLWWEFFTIFTRFCVTFCLT*CYMYLVC*NKKLNVEYFYSLGMGKRTMDAIIN
EETNRFIASVQLAGGTVNILV*KVSLGYYDKIFMLYPQNGNVFLITYD**HR*KNHNLH*
K*DTNLHPREREISRGVNTFHTLRVLIDFTIE*VKRLCNAQQNTYRTRFDGFRPIIHAIF
YRGSTLTTKIRDYKRL*TTGMKAYTNIPVYTSLKAIQYTSLI*YS**X
>_2
LKTMISSSCGGNSLPSLPDSVLRFASLNVICTLCVKIKN*MSNIFTVWEWESVPWMQLLT
KKQIALSLQSN*PAELSTYWFEKFHWDIMIRYLCFIPKMEMSF**PMISNTVKRIITCIK
NKILIFIRVNGKSQGASTHSTH*GF**ILR*NKLNACVMHSKILTGRDSTASGQ*YMQFS
IGEAL*LQR*EITSDYRPQV*KHTLTFRFIHR*RRYNIQVLFNIPNN
>_3
*KL*SPRPVVGILYHLYPILCYVLPHLMLYVPCVLK*KTKCRIFLQFGNGKAYHGCNY*R
RNKSLYRFSPISRRNCQHTGLKSFIGIL**DIYALSPKWKCLFDNL*LVTPLKES*LALK
IRY*SSSA*TGNLKGRQHIPHIKGFDRFYDRIS*TLV*CTAKYLQDEIRRLQANNTCNFL
SGKHFDYKDKRLQAIIDHRYESIH*HSGLYIAKGDTIYKSYLIFLII

Do these overlap?
>_4
DYKIRDLQAIIDHRYGSIH*HSVXYIAKGDTIYKSYLIFLIITFK*QT*HLTLQEYYYFI
QIRHTSLI*YS**LPLNDRHDI*RYRNITTLYKFANVFPGLPVPLLFSCRFFDSYHPSNK
NFKKWWTAQSKS*VLLKLLLKPWQVIYFSCQALYPLYAIVCKYARSNNMNFVVVVQMYNE
RDLLG*DLLLS*KSEPWLSKLVILKRRSTDQHCPR*FFTNI**NTVLYKM*LKIPPQGDI
Q
>_5
*LQDKRFTSDYRPQVWKHTLTFRXIYC*RRYNIQVLFNISNNYL*MTDMTFNVTGILLLY
TNSPYKSYLIFLIITFK*QT*HLTLQEYYYFIQIRQCVPRPTGTIVVFLPFLRFIPPFKQ
KFQKMVDSTEQVIGIVKIVIKTVASHLFLLPSFIPSLCYCL*ICPI**YEFRGSCTNVQ*
KGFVGMRFALKLEKRALAF*TGDSQTQVHRPALSAVIFY*HMIKYGSLQNVIENSTTGRY
SX
>_6
TTR*EIYKRL*TTGMEAYTNIPXYILLKAIQYTSLI*YF**LPLNDRHDI*RYRNITTLY repeat
KFAIQVLFNIPNNYL*MTDMTFNVTGILLLYTNSPMCSQAYRYHCCFLAVSSIHTTLQTK
ISKNGGQHRASHRYC*NCY*NRGKSSISPAKLYTLFMLLSVNMPDLII*ISW*LYKCTMK
GICWDEICS*ARKASLGFLNW*FSNAGPQTSTVRGDFLLTYDKIRFFTKCN*KFHHRAIF
X

>scf/ciona01/G126/seq_dir/hrs/G126P68275F.T0/G126P68275FC12.T0.seq    684
            0    684  ABI
            Length = 684

  Plus Strand HSPs:

 Score = 101 (35.6 bits), Expect = 7.3e-05, P = 7.3e-05
 Identities = 20/33 (60%), Positives = 25/33 (75%), Frame = +1

Query:     1 LGMGKRSMVGIINEENQNFLSVIQSSGGKVNIL 33
             LGMGKR+M  IINEE   F++ +Q +GG VNIL
Sbjct:   142 LGMGKRTMDAIINEETNRFIASVQLAGGTVNIL 240

>scf/ciona01/G126/seq_dir/hrs/G126P68275F.T0/G126P68275FC12.T0.seq    684      0    684  ABI
CTTGAAAACTATGATCTCCTCGTCCTGTGGTGGGAATTCTTTACCATCTT
TACCCGATTCTGTGTTACGTTTTGCCTCACTTAATGTTATATGTACCTTG
TGTGTTAAAATAAAAAACTAAATGTCGAATATTTTTACAGTTTGGGAATG
GGAAAGCGTACCATGGATGCAATTATTAACGAAGAAACAAATCGCTTTAT
CGCTTCAGTCCAATTAGCCGGCGGAACTGTCAACATACTGGTTTGAAAAG
TTTCATTGGGATATTATGATAAGATATTTATGCTTTATCCCCAAAATGGA
AATGTCTTTTTGATAACCTATGATTAGTAACACCGTTAAAAGAATCATAA
CTTGCATTAAAAATAAGATACTAATCTTCATCCGCGTGAACGGGAAATCT
CAAGGGGCGTCAACACATTCCACACATTAAGGGTTTTGATAGATTTTACG
ATAGAATAAGTTAAACGCTTGTGTAATGCACAGCAAAATACTTACAGGAC
GAGATTCGACGGCTTCAGGCCAATAATACATGCAATTTTCTATCGGGGAA
GCACTTTGACTACAAAGATAAGAGATTACAAGCGATTATAGACCACAGGT
ATGAAAGCATACACTAACATTCCGGTTTATACATCGCTAAAGGCGATACA
ATATACAAGTCTTATTTAATATTCCTAATAATTN

>_1
LENYDLLVLWWEFFTIFTRFCVTFCLT*CYMYLVC*NKKLNVEYFYSLGMGKRTMDAIIN
EETNRFIASVQLAGGTVNILV*KVSLGYYDKIFMLYPQNGNVFLITYD**HR*KNHNLH*
K*DTNLHPREREISRGVNTFHTLRVLIDFTIE*VKRLCNAQQNTYRTRFDGFRPIIHAIF
YRGSTLTTKIRDYKRL*TTGMKAYTNIPVYTSLKAIQYTSLI*YS**X
>_2
LKTMISSSCGGNSLPSLPDSVLRFASLNVICTLCVKIKN*MSNIFTVWEWESVPWMQLLT
KKQIALSLQSN*PAELSTYWFEKFHWDIMIRYLCFIPKMEMSF**PMISNTVKRIITCIK
NKILIFIRVNGKSQGASTHSTH*GF**ILR*NKLNACVMHSKILTGRDSTASGQ*YMQFS
IGEAL*LQR*EITSDYRPQV*KHTLTFRFIHR*RRYNIQVLFNIPNN
>_3
*KL*SPRPVVGILYHLYPILCYVLPHLMLYVPCVLK*KTKCRIFLQFGNGKAYHGCNY*R
RNKSLYRFSPISRRNCQHTGLKSFIGIL**DIYALSPKWKCLFDNL*LVTPLKES*LALK
IRY*SSSA*TGNLKGRQHIPHIKGFDRFYDRIS*TLV*CTAKYLQDEIRRLQANNTCNFL
SGKHFDYKDKRLQAIIDHRYESIH*HSGLYIAKGDTIYKSYLIFLII

LQW69473.x1 

           CHEM: term DYE: ET TIME: Fri May  4 12:32:48 2001
           TEMPLATE: LQW69473 DIRECTION: fwd
          Length = 478

 Score = 66.0 bits (158), Expect = 5e-11
 Identities = 32/33 (96%), Positives = 33/33 (99%)
 Frame = -1

Query: 1   LGMGKRTMVGIINEENQNFLSVIQSSGGKVNIL 33
           LGMGKR+MVGIINEENQNFLSVIQSSGGKVNIL
Sbjct: 379 LGMGKRSMVGIINEENQNFLSVIQSSGGKVNIL 281

>_4
MPTCRL*EIDT*ILCANDVPSSPTPLYIYHFLA*EWEKEAWSEL*TKKTRIFYP*YNLLE
ERLTFW*AIFFYWYTSFYF*RYMHFLLQSEFRKLLSNIVSNLIMGKRFNYEDEKLQAIVD
HR**MI*LNHARYKTAKCHYI*YRVGEDGTPLAHNIQWD
>_5
HAYLSTIGDRHLDIMC*RCPIFPHPTIYLPFFSLGMGKRSMVGIINEENQNFLSVIQSSG
GKVNILVSHIFLLVHVLLFLTLYAFLTTV*ISETPVEYC**SDNGKAF*LRRREAASYCG
S*VINDIT*PCKV*NCKVPLYIV*GGGRWDTVST*YTVGX
>_6
CLLVDYRRSTLRYYVLTMSHLPPPHYIFTIF*PRNGKKKHGRNYKRRKPEFFIRNTIFWR
KG*HFGKPYFFIGTRPFIFNVICISYYSLNFGNSCRILLVI**WESVLTTKTRSCKLLWI
IGNK*YNLTMQGIKLQSAIIYSIGWGKMGHR*HIIYSGX

>GCiWno663_c10.b1 CHROMAT_FILE: GCiWno663_c10.b1 PHD_FILE: GCiWno663_c10.b1.phd.1
           CHEM: term DYE: big TIME: Fri Nov  2 11:02:35 2001
           TEMPLATE: GCiWno663_c10 DIRECTION: fwd
          Length = 885

 Score = 59.7 bits (142), Expect = 4e-09
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = +3

Query: 1   LGMGTRSMVGIINEENQNFSSVIQSSGGQVNIL 33
           LGMG R+MVGIINEENQNF SVIQSSGG+VNIL
Sbjct: 201 LGMGKRTMVGIINEENQNFLSVIQSSGGKVNIL 299

>GCiWno709_i09.b1 CHROMAT_FILE: GCiWno709_i09.b1 PHD_FILE: GCiWno709_i09.b1.phd.1
           CHEM: term DYE: big TIME: Tue Nov  6 11:40:56 2001
           TEMPLATE: GCiWno709_i09 DIRECTION: fwd
          Length = 892

 Score = 71.4 bits (172), Expect = 1e-12
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = -2

Query: 1   RPTSSVVMFIPFLRFIPPFKQGYQRLIASTQRVL 34
           RPTSSVVMFIPFLRFIPPFKQGYQRLIASTQRVL
Sbjct: 264 RPTSSVVMFIPFLRFIPPFKQGYQRLIASTQRVL 163

>GCiWno709_i09.b1
TCTCCACAGAAATATATCGATAAAATCTCTAAGGTTGTTTTCGTCGAAAGAATTTTTGTGCTCTTCAGTTATTTCAGAGA
TAATATCTGTACGGCGTATGGCACAAAGTTAATATGTTATAAATATAAGGGAATAAACTACACTAGTATTAAGCCATGTA
CCTAAAACCCGTTGCGTGCTGGCGATTAATCTCTGATAGCCTTGTTTGAATGGTGGTATAAATCGAAGAAACGGAATAAA
CATAACGACGCTGCTTGTCGGCCTGCATTACAGTTTATTGTAAAATTAACGCATTATAAACAAAATTAAGCACTTGTATA
CACTTTGTGTAGATAAATGGGTATGATATATAGTGGGGGTAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCNNCCCCCCCCCCCCCCCCC
CCCCCCCCCCCC
>GCiWno709_i09.g1
CAAGCTTAAAACAGTGGTTATCTATATATAATATACCTTTGGTGGGAGGCGTTTCATAGATAACTGGAAATGTAAAAACT
AAAACTAGCACCGATACTGTGGCAAAAACGCGTAGTATACCCAGAAACTAAGTGTAGTAGGGTGGGAGAAGATGGACCAC
CTTTTCAATATATTTTCTCGTCCCATTTGGTAGGAAACAAGATCACCTATGATATAATATAAGAATAAAAACGTAGACCA
TCTTACCCCGCCCAATAGACCGTCATCCAATATCTATATTTAAAGTGTGCGAGAAGCCCATGCGGTGCTGCGTGTTGTGG
CTGCTGTATAGGTTTCTGTAACATTGCATTTGCTCTACACGGAAATGGCAAACTTTTAACCGACTTCCGTGTTACTCTAA
CTTTGATTACTTATGTCTGTTCTATTTTGTATGCTGTTGGCTTATGTGCATATTTTTTGTCTTGATAGTCTTATGAAAGT
TACCTAAACCGGGATTGCAAAACTCAAAGTCTCACAGTAACAACAATTTTACATTTTTTACCTATATTCTTTCAATGAAT
CATTAAACAAAATGAAATTACACCTATACTANATACACGGCTAAGCCATATTTCCACGGAGCGAAGAAAGACACATTAAA
AGCAGATTATACGAAACGCTGTGTTGTTGAATTATCTTTAAGTTACATNCATGGTATTTCTACTTATCCACCGGGTGTTT
ATCTTCGTGTGCGCTGTAGCCCAAGTTTGGCATTGGCTGCTGCAATTGGCGTTTCANACATGCTATGAAGGGTATGGTTG
TTAAAAAGGCCAAAGGCATTACGGGCTGCTTGCCCTTATTCGATTTTAACCCCGATTCCCATAAAAAAACCTTAAGGTAA
AAATAGGTTCTATTTTTATTTGTTCCATTTGCACGCTTCGGTATACAGAGGTTT

>GCiWno500_a16.g1 CHROMAT_FILE: GCiWno500_a16.g1 PHD_FILE: GCiWno500_a16.g1.phd.1
           CHEM: term DYE: big TIME: Tue Oct 16 11:38:05 2001
           TEMPLATE: GCiWno500_a16 DIRECTION: rev
          Length = 938

 Score = 82.7 bits (201), Expect = 4e-16
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 34  DIISEITEEHKNSFDENNLRDFIDIFLLEMKRRNSEYFT 72
           DIISEITEEHKNSFDENNLRDFIDIFLLEMKRRNSEYFT
Sbjct: 337 DIISEITEEHKNSFDENNLRDFIDIFLLEMKRRNSEYFT 221

>GCiWno500_a16.g1
TTTACCAAAATCGTAACTTTAATATATAATTGCTAAGTTTTCTGTAAAATGCAGGTTAAGAATAGTCTTTATGCTGTGCC
GAAATAGGAACAAAATAAACAGATTCCGGCGTCATTCTCCTCGACTACATTTTGGAAACTATAACGTACAATTTAAATGC
AATTTTCCTCTAAACGTGGCAAATTTTTCGTTAATAACACGAAAGTCAAGCTTTACTTACTGTGAAATATTCGCTGTTCC
GTCGTTTCATCTCCAACAGAAATATATCGATAAAATCTCTAAGGTTGTTTTCGTCGAAAGAATTTTTGTGCTCTTCAGTT
ATTTCAGAGATAATATCTGTACGGCGTATGGCACAAAGTTAATATGTTATAAATATAAGGGAATAAACTACACTAGTATT
AAGCCATGTACCTAAAACCCGTTGCGTGCTGGCGATTAATCTCTGATAGCCTTGTTTGAATGGTGGTATAAATCGAAGAA
ACGGAATAAACATAACGACGCTGCTTGTCGGCCTGCATTACAGTTTATTGTAAAATTAACGCATTATAAACAAAATTAAG
CACTTGTATACACTTTGTGTAGATAAATGGGTATGATATATAGTGGGGGTAGGGCNCCNCNCCCCCCCCCCCCCCCTCCC
CTTCTCCCCTTTTCCTTCTTTTCCCTCTCTTTCCTTTTTGTTTTCCCTTGCGTTTGTCCGTGCCGTCCTACCGCGCGCCT
CCCGTCCTTTCTGTTTTGCCTCTTACCTGATTGTCGCCTTCTTTTTCGTGCGGGTTCGTTCTGGTGTTTACTNGCTTCCG
TCTATCCTGTTCATCACTCACTATTTTCTTTGATTATACTGTCTACCCTTTAGCTCGAGTGGCTTGTGTCACTGCGTCAC
TTTCTGTGCGATTTTTCTCATTTATGTACTCTTTCTGTGTTTTGTTCTTCATTGTAAT

>_4
YNEEQNTERVHK*EKSHRK*RSDTSHSS*RVDSIIKENSE**TG*TEASKHQNEPARKRR
RQSGKRQNRKDGRRAVGRHGQTQGKTKRKEREKKEKGRRGGGGGGXGALPPLYIIPIYLH
KVYTSA*FCL*CVNFTINCNAGRQAASLCLFRFFDLYHHSNKAIRD*SPARNGF*VHGLI
LV*FIPLYL*HINFVPYAVQILSLK*LKSTKILSTKTTLEILSIYFCWR*NDGTANISQ*
VKLDFRVINEKFATFRGKLHLNCTL*FPKCSRGE*RRNLFILFLFRHSIKTILNLHFTEN
LAIIY*SYDFGK
>_5
LQ*RTKHRKST*MRKIAQKVTQ*HKPLELKGRQYNQRK**VMNRIDGSX*TPERTRTKKK
ATIR*EAKQKGREARGRTARTNARENKKEREGKEGKGEKGRGGGGXXXPTPTIYHTHLST
QSVYKCLILFIMR*FYNKL*CRPTSSVVMFIPFLRFIPPFKQGYQRLIASTQRVLGTWLN
TSVVYSLIFITY*LCAIRRTDIISEITEEHKNSFDENNLRDFIDIFLLEMKRRNSEYFTV
SKA*LSCY*RKICHV*RKIAFKLYVIVSKM*SRRMTPESVYFVPISAQHKDYS*PAFYRK
LSNYILKLRFW*X
>_6
ITMKNKTQKEYINEKNRTESDAVTQATRAKG*TV*SKKIVSDEQDRRKXVNTRTNPHEKE
GDNQVRGKTERTGGAR*DGTDKRKGKQKGKRGKRRKRGEGEGGGGGXXPYPHYISYPFIY
TKCIQVLNFVYNALILQ*TVMQADKQRRYVYSVSSIYTTIQTRLSEINRQHATGFRYMA*
Y*CSLFPYIYNILTLCHTPYRYYL*NN*RAQKFFRRKQP*RFYRYISVGDETTEQRIFHS
K*SLTFVLLTKNLPRLEENCI*IVRYSFQNVVEENDAGICLFCSYFGTA*RLFLTCILQK
T*QLYIKVTILVX

For comp
>Ci27 
MLTNLIANPSISPVLAILSCVIAFYYWYKRPKNMPPGPRGIPFLGIIPFVGMN
PEQAFMQWSKKYGPVITVRMGRKDWVVLCDHDTIHQ (0)
VLVKQSTVCSGRPKIPIVSELSKGHGILFADYCEKWKSQRKFGMKTLRE (2) 
FGVGKKCTEDRVLEEVDFLCNEIRSKNGKPFDIQ (0)
DIMCNAVSNIIMNIVIGRRCNYDENFFTDVISRFTKW (2) 
DEIRRLQANNTCNFLSGKHFDYKDKRLQAIIDHR (2)

FNDPTAGAMFTGMMFLPQLKYVPPFSKYYKIFRDDIGALH (1) 
      RPTSSVVMFIPFLRFIPPFKQGYQRLIASTQRVL (1)
EFFEEVIKEHEKNFDGNNLRDFIDAFLLEMKKNESGSEFT (0)

Savignyi ortholog 
>scf/ciona01/G126/seq_dir/hrs/G126P67716F.T0/G126P67716FC1.T0.seq    764      0
            764  ABI
            Length = 764

  Plus Strand HSPs:

 Score = 131 (46.1 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 21/35 (60%), Positives = 32/35 (91%), Frame = +3

Query:     2 RPTSSVVMFIPFLRFIPPFKQGYQRLIASTQRVLG 36
             RPT ++V+F+PFLRFIPPFKQ +Q+++ ST++V+G
Sbjct:    48 RPTGTIVVFLPFLRFIPPFKQKFQKMVDSTEQVIG 152



>sequence 15, 63 N-term 
does not seem to have ortholog to I-helix region in savignyi
MESVWVVIKWVKETMMSNSSFETIVAVATLLLLLMFVSENWNWLKIPGPI
PWPIIGNLGSLKGTKFLSIHEMYKIYGRIFRLKFGRVEAVVLCDVELIKE
ALLDRGRSLSGRPQFASYRLVSGCKSVVTNDPRCLREWVNY
KSTMVQTLCSISKNNEMKELMNERIGSVLVYMIQELEKGGDGQNFAEDIVTKTVANFLCT
VCYGGTYDFNSK (0)
EFNNLIEMSRHYTDNLSKSILRDMIPLAE (0)
ILPSVNKGRADFAKTSYHLHLWFLKR (2)
VEEVIQHFQPNKLNDLASVMVSDLTNDPTENISNITEKDRNSIAAIINDLVQG (?)
GYHSLYSMALWVVTYMIKYPEEVKKIENELNEVLDDYLPTLHDQESLPHTMAFINE (0)
VLRCRPSLPLAVPHSATEDTKLGGYDISKDTMVVASLYSANRDPKVWANPDQFDPSR
FLAKDDLGVTVLDETKVEQVFTFSLGDRKCPGEDIGRSFLFLTTAYLAHTCKLKPDPAK
PPTFQTKPGSITRPKDFGVQLNVKKCWLGVFKPDDNEE*
LQW103446.y1
LQW103446.x1 
DEV11417.x1
GCiWno937_j11.b1
GCiWno473_k21.g1

GCiWno456_a24.b1
GCiWno622_k05.b1
GCiWno59_g04.g1

LQW219332.x1 
LQW219332.x1.phd.1 LQW219332.y1 

           13:29:49 2001 TEMPLATE: LQW219332 DIRECTION: fwd
          Length = 844

 Score = 66.7 bits (160), Expect = 3e-11
 Identities = 37/46 (80%), Positives = 38/46 (82%)
 Frame = +3

Query: 30  VEEVIQHFQPNKLNDLASVMVSDLTNDPTENISNITEKDRNSIAAI 75
           VEEVIQHFQPNKLNDL SVMVSDLTNDPTENI  I  K   SIAA+
Sbjct: 675 VEEVIQHFQPNKLNDLXSVMVSDLTNDPTENIL-I*LKRIESIAAL 809

 Score = 64.4 bits (154), Expect = 2e-10
 Identities = 32/37 (86%), Positives = 32/37 (86%)
 Frame = +3

Query: 1   EFNNLIEMSRHYTDNLSKSILRDMIPLAEVEEVIQHF 37
           EFNNLIEMSRHYTDNLSKSILRDMIPLAEV   I  F
Sbjct: 174 EFNNLIEMSRHYTDNLSKSILRDMIPLAEVNTCILVF 284

>LQW219332.x1
>lcl|LQW219332.x1 CHROMAT_FILE: LQW219332.x1 PHD_FILE: LQW219332.x1.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 13:29:49 2001 TEMPLATE: LQW219332 DIRECTION: fwd 
AAAAAACGGCAGTGCATGGGGAAACTATGATTTTAACAGCAAGGTTGTTTTATATCATTTTTTTGGTTTTTATTTTCGTA

ATTTTTGTTTTTTTTGGTTCTTATATATATAATTTTGGTTCTTATATACGCCAAGGCATGCTCTTTTGTAACCATGAAAA

CTTTTTGCAACAGGAATTCAACAATTTGATTGAAATGAGCCGACATTACACGGACAACTTGTCAAAATCGATATTGCGCG

ACATGATCCCACTTGCAGAAGTAAACACATGTATTCTGGTATTTTAAAATTGATAGAGTGGAGTAAGATGGGTCACCTTT

TCATTCTATTTTCTAGTTCGAATTGGTAATAAACGAAGAACATTCAAAGAATTATAAAACCGTTTCGTTACGACTTCCAT

ATACGCTGTTGTTAATTGTTTAAAACACGATCAGGATATTTGGATATTATGTGTTAAAGGTGTCCCATGTGTTAAATGTT

AAAGGTGTGTCTTCCCTCGCTCTCTACTATATAACAGACACATCGTTTCAGATTCTTCCAAGCGTAAACAAAGGAAGAGC

AGATTTTGCCAAGACGAGCTACCACCTCCACCTCTGGTTCTTAAAAAGGTACAAACCGGGAAATAAAACGCCCATGCTTT

GCGACCAATTTAAAATAATGTGTCCACTCATAGGGTAGAAGAGGTCATTCAACATTTCCAACCAAACAAACTAAACGACT

TGGNCTCAGTGATGGTCTCTGACTTAACTAATGACCCCACAGAAAATATTCTAATATAACTGAAAAGGATCGAATCGATA

GCAGCATTATCAACGACTTGGTCAAGTTACCCCGGGTTCGTGGG 

>LQW219332.x1_1
KKRQCMGKL*F*QQGCFISFFWFLFS*FLFFLVLIYIILVLIYAKACSFVTMKTFCNRNS
TI*LK*ADITRTTCQNRYCAT*SHLQK*THVFWYFKIDRVE*DGSPFHSIF*FELVINEE
HSKNYKTVSLRLPYTLLLIV*NTIRIFGYYVLKVSHVLNVKGVSSLALYYITDTSFQILP
SVNKGRADFAKTSYHLHLWFLKRYKPGNKTPMLCDQFKIMCPLIG*KRSFNISNQTN*TT
WXQ*WSLT*LMTPQKIF*YN*KGSNR*QHYQRLGQVTPGSWX
>LQW219332.x1_2
KNGSAWGNYDFNSKVVLYHFFGFYFRNFCFFWFLYI*FWFLYTPRHALL*P*KLFATGIQ
QFD*NEPTLHGQLVKIDIARHDPTCRSKHMYSGILKLIEWSKMGHLFILFSSSNW**TKN
IQRIIKPFRYDFHIRCC*LFKTRSGYLDIMC*RCPMC*MLKVCLPSLSTI*QTHRFRFFQ
A*TKEEQILPRRATTSTSGS*KGTNREIKRPCFATNLK*CVHS*GRRGHSTFPTKQTKRL
GLSDGL*LN**PHRKYSNITEKDRIDSSIINDLVKLPRVRG
>LQW219332.x1_3
KTAVHGETMILTARLFYIIFLVFIFVIFVFFGSYIYNFGSYIRQGMLFCNHENFLQQEFN
NLIEMSRHYTDNLSKSILRDMIPLAEVNTCILVF*N**SGVRWVTFSFYFLVRIGNKRRT
FKEL*NRFVTTSIYAVVNCLKHDQDIWILCVKGVPCVKC*RCVFPRSLLYNRHIVSDSSK
RKQRKSRFCQDELPPPPLVLKKVQTGK*NAHALRPI*NNVSTHRVEEVIQHFQPNKLNDL
XSVMVSDLTNDPTENILI*LKRIESIAALSTTWSSYPGFV

>GCiWno735_m10.b1_1
I*SLAE*KRSFSVMLN**KKHYLIEGGLSQVVRSLHRIDWYLVARALLQTTHVV*GNG*T
TSRRWYRLYAVSQKTMK*KNL*TNASDLCLFI*SRN*RKVAMVRTLQKILSLRQSQISCA
LCAMGEPMISIARLFHIIFLVFIYVIFVFLVLIYIIFGSHIRQGKLFRNHENFLQQEFNN
LIEMSRHYTDNLSKSILRDMIPLAEVNTCILVF*N**SGERWVTFSFYFLVRIGNKRRTF
KEL*NRFHTTTIYAXCNC*NTIRIFGYMCLRCPMXKC*RCAFPPLYYIRILISDLPRVT
>GCiWno735_m10.b1_2
FEVWPSKSGRSL*C*IDKRSIT**REVSLRSSAVCIV*TGIWLQERCYKRPTLFKGMGKL
QVDDGTDFMQYLKKQ*NERTYERTHRICACLYDPGIRERWRWSELCRRYCH*DSRKFPVH
CVLWGNL*FQ*QGCFISFFWFLYT*FLFFWFLYI*FLVLIYDKASSFVTMKTFCNRNSTI
*LK*ADITRTTCQNRYCAI*SHLQK*THVFWYFKIDRVGKDGSPFHSIF*FELVINEEHS
KNYKTVSIRLPYTLVVIVKTRSGYLDICV*DVPCXNVKGVPSLLSTIYGYSFRIFQG*
>GCiWno735_m10.b1_3
LKFGRVKAVVLCDVELIKEALLDRGRSLSGRPQFASYRLVSGCKSVVTNDPRCLREWVNY
KSTMVQTLCSISKNNEMKELMNERIGSVLVYMIQELEKGGDGQNFAEDIVTKTVANFLCT
VCYGGTYDFNSKV VSYHFFGFYIRNF CFFGSYIYNFWFSYTTRQALS*P*KLFATGIQQF
D*NEPTLHGQLVKIDIARYDPTCRSKHMYSGILKLIEWGKMGHLFILFSSSNW**TKNIQ
RIIKPFPYDYHIRXL*LLKHDQDIWIYVFKMSHV*MLKVCLPSSLLYTDTHFGSSKGN

>GCiWno735_m10.b1
ATTTGAAGTTTGGCCGAGTAAAAGCGGTCGTTCTCTGTGATGTTGAATTGATAAAAGAAGCATTACTTGATAGAGGGAGG
TCTCTCTCAGGTCGTCCGCAGTTTGCATCGTATAGACTGGTATCTGGTTGCAAGAGCGTTGTTACAAACGACCCACGTTG
TTTAAGGGAATGGGTAAACTACAAGTCGACGATGGTACAGACTTTATGCAGTATCTCAAAAAACAATGAAATGAAAGAAC
TTATGAACGAACGCATCGGATCTGTGCTTGTTTATATGATCCAGGAATTAGAGAAAGGTGGCGATGGTCAGAACTTTGCA
GAAGATATTGTCACTAAGACAGTCGCAAATTTCCTGTGCACTGTGTGCTATGGGGGAACCTATGATTTCAATAGCAAGGT
TGTTTCATATCATTTTTTTGGTTTTTATATACGTAATTTTTGTTTTTTTGGTTCTTATATATATAATTTTTGGTTCTCAT
ATACGACAAGGCAAGCTCTTTCGTAACCATGAAAACTTTTTGCAACAGGAATTCAACAATTTGATTGAAATGAGCCGACA
TTACACGGACAACTTGTCAAAATCGATATTGCGCGATATGATCCCACTTGCAGAAGTAAACACATGTATTCTGGTATTTT
AAAATTGATAGAGTGGGGAAAGATGGGTCACCTTTTCATTCTATTTTCTAGTTCGAATTGGTAATAAACGAAGAACATTC
AAAGAATTATAAAACCGTTTCCATACGACTACCATATACGCTNGTTGTAATTGTTAAAACACGATCAGGATATTTGGATA
TATGTGTTTAAGATGTCCCATGTNTAAATGTTAAAGGTGTGCCTTCCCTCCTCTCTACTATATACGGATACTCATTTCGG
ATCTTCCAAGGGTAACA

We are looking for a short 19aa exon to bridge the phase 0 and phase 2 ends on existing exons

>GCiWno473_k21.b1 CHROMAT_FILE: GCiWno473_k21.b1 PHD_FILE: GCiWno473_k21.b1.phd.1
           CHEM: term DYE: big TIME: Mon Oct 15 10:55:02 2001
           TEMPLATE: GCiWno473_k21 DIRECTION: fwd
          Length = 901

 Score = 37.5 bits (85), Expect(2) = 4e-04
 Identities = 20/22 (90%), Positives = 20/22 (90%), Gaps = 1/22 (4%)
 Frame = +2

Query: 1   TKEEQILPRRATTSTSGS-KGT 21
           TKEEQILPRRATT TSGS KGT
Sbjct: 749 TKEEQILPRRATTFTSGSLKGT 814


 Score = 25.4 bits (54), Expect(2) = 4e-04
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +3
This might be it
Query: 19  KGTNREIKRPCFATNLK 35
           K  NREIK P  ATNLK
Sbjct: 807 KVQNREIKTPWLATNLK 857


>GCiWno735_m10.b1 CHROMAT_FILE: GCiWno735_m10.b1 PHD_FILE: GCiWno735_m10.b1.phd.1
           CHEM: term DYE: big TIME: Wed Nov 28 13:26:45 2001
           TEMPLATE: GCiWno735_m10 DIRECTION: fwd
          Length = 897
This seq spans the N and C-terminal parts of the gene

 Score = 62.8 bits (150), Expect = 7e-10
 Identities = 31/40 (77%), Positives = 32/40 (79%)
 Frame = +1

Query: 34  LFKGMGKLPVDEFNNLIEMSRHYTDNLSKSILRDMIPLAE 73
           LF+        EFNNLIEMSRHYTDNLSKSILRDMIPLAE
Sbjct: 496 LFRNHENFLQQEFNNLIEMSRHYTDNLSKSILRDMIPLAE 615


 Score = 51.5 bits (121), Expect(2) = 1e-12
 Identities = 21/29 (72%), Positives = 25/29 (85%)
 Frame = +2

Query: 23  WLQERCYKRPTLFKGMGKLPVDEFNNLIE 51
           WLQERCYKRPTLFKGMGKL VD+  + ++
Sbjct: 125 WLQERCYKRPTLFKGMGKLQVDDGTDFMQ 211


 Score = 40.2 bits (92), Expect(2) = 1e-12
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +3

Query: 1  ALLERGRSLSGRPQLPSYRLVS 22
          ALL+RGRSLSGRPQ  SYRLVS
Sbjct: 60 ALLDRGRSLSGRPQFASYRLVS 125



>scf/ciona01/G126/seq_dir/hrs/G126P607922F.T0/G126P607922FA4.T0.seq file 21
            0    998  ABI
            Length = 998

  Minus Strand HSPs:
This seq is 68% to seq 36 
 Score = 71 (25.0 bits), Expect = 0.20, P = 0.18
 Identities = 15/47 (31%), Positives = 25/47 (53%), Frame = -3

Query:    11 WVVTYMIKYPEEVKKIENELNEVLDDY-LPTLHDQESLPHTMAFINE 56
             W +  ++ YPE  + I  E+ +      +P++ D+  LP T AFI E
Sbjct:   408 WAILALLYYPEYAELIYGEIYKAFGSTGVPSMKDRGKLPLTCAFIQE 268

>scf/ciona01/G126/seq_dir/hrs/G126P602032R.T0/G126P602032RD5.T0.seq file 14
            0    731  ABI
            Length = 731

  Minus Strand HSPs:

 Score = 89 (31.3 bits), Expect = 0.0017, P = 0.0017
 Identities = 19/47 (40%), Positives = 28/47 (59%), Frame = -1
This seq is 78% to seq 36 = probable ortholog to seq 36
Query:    11 WVVTYMIKYPEEVKKIENELNEVL-DDYLPTLHDQESLPHTMAFINE 56
             W V   + +PE V  + NE+ EVL  D +P + D++ +P T AFI E
Sbjct:   386 WSVLAFLYHPEYVSLMYNEIYEVLGSDGVPCMKDRDKMPKTCAFIQE 246

A related savignyi hit this seq is 69% to seq 67 = probable ortholog to 67
>scf/ciona01/G126/seq_dir/hrs/G126P69880F.T0/G126P69880FD5.T0.seq  file 11
            765  ABI
            Length = 765

  Plus Strand HSPs:

 Score = 113 (39.8 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 19/56 (33%), Positives = 33/56 (58%), Frame = +2

Query:     1 GYHSLYSMALWVVTYMIKYPEEVKKIENELNEVLDDYLPTLHDQESLPHTMAFINE 56
             G H+      WV+  ++ YP+ +++I NE+   + + +PTL DQ  LP+  AF+ E
Sbjct:   311 GQHTTSGTFFWVINILLFYPKVLQRITNEVRSKIGERIPTLEDQADLPYVEAFLTE 478




>GCiWno151_b22.b1_1
FGS*TAFQ*NDCTIMRHRMFPIILPLILALISCALCAMGKPMILTARLFYIIFLVFIFVI
FVFFGSYIYNFWFLYTPRHALL*P*KLFATGIQQFD*NEPTLHGQLVKIDIARHDPTCRS
KHMYSGILKLIEWSKMGHLFILFSSSNW**TKNIQRIIKPFRYDFHIRCC*LFKTRSGYL
DIMC*RCPMC*MLKVCLPSLSTI*QTHRFRFFQA*TKEEQILPRRATTSTSGS*KGTNRE
IKRPCLRPI*NNVSTHRVEEVIQHFQPNKLNDLASVMVSDLTNDPTGNISNITEXGSNSI
APFX
>GCiWno151_b22.b1_2
SGHRLLSSKTTARSCVIECFQ*YYR*YWP*FPVHCVLWGNL*F*QQGCFISFFWFLFS*F
LFFLVLIYIIFGSYIRQGMLFCNHENFLQQEFNNLIEMSRHYTDNLSKSILRDMIPLAEV
NTCILVF*N**SGVRWVTFSFYFLVRIGNKRRTFKEL*NRFVTTSIYAVVNCLKHDQDIW
ILCVKGVPCVKC*RCVFPRSLLYNRHIVSDSSKRKQRKSRFCQDELPPPPLVLKKVQTGK
*NAHACDQFKIMCPLIG*KKSFNISNQTN*TTWPQ*WSLT*LMTPQEIFLI*LXKDRTR*
HHF
>GCiWno151_b22.b1_3
RVIDCFPVKRLHDHAS*NVSNNITANTGPNFLCTVCYGETYDFNSKVVLYHFFGFYFRNF
CFFWFLYI*FLVLIYAKACSFVTMKTFCNRNSTI*LK*ADITRTTCQNRYCAT*SHLQK*
THVFWYFKIDRVE*DGSPFHSIF*FELVINEEHSKNYKTVSLRLPYTLLLIV*NTIRIFG
YYVLKVSHVLNVKGVSSLALYYITDTSFQILPSVNKGRADFAKTSYHLHLWFLKRYKPGN
KTPMLATNLK*CVHS*GRRSHSTFPTKQTKRLGLSDGL*LN**PHRKYF*YN*XRIELDS
TI

LFFLVLIYIIFGSYIRQGMLFCNHENFLQQEFNNLIEMSRHYTDNLSKSILRDMIPLAEV
NTCILVF
NDCTIMRHRMFPIILPLILALISCALCAMGKPMILTARLFYIIFLVFIFVI
FVFFGSYIYNFWFLYTPRHALL
NVSNNITANTGPNFLCTVCYGETYDFNSKVVLYHFFGFYFRNF
CFFWFLYI
NTIRIFG
YYVLKVSHVLNVKGVSSLALYYITDTSFQILPSVNKGRADFAKTSYHLHLWFLKRYKPGN
KTPMLATNLK


>DEV46242.x1_1
VIQHFQPNKLNDLAQ*WSLT*LMTPQKIFLI*LKRIETR*QQLSTTWYKVTHKRCRVGKM
GHLSFSS**KQNIKLYLRDFHRPLLIV*NTGYLVIIVIFPHSTIRCIG*KIA*TCCKKGY
HSLYSMALWVVTYMIKYPEEVKKIENELNEVLDDYLPTLHDQESLPHTMAFINEVRMQKL
SNLNAPGKIANDVLPC*VX
>DEV46242.x1_2
SFNISNQTN*TTWLSDGL*LN**PHRKYF*YN*KGSKLDSSNYQRLGTR*HINGVGWGRW
DTSHLVVNKNRI*NCIFATSIDRC*LFKTQDIWL*L*SFPTVLYDV*VKKLLKHVAKKVI
ILCTLWRYGWSHT**STQKK*KRLKTS*MKCWTTIFLRYMTRSLYHTPWPLSMRLECKSY
LI*THLEKSLMMCYRAEF
>DEV46242.x1_3
HSTFPTKQTKRLGSVMVSDLTNDPTENISNITEKDRNSIAAIINDLVQGNT*TV*GGEDG
TPLI**LIKTEYKTVSSRLP*TVVNCLKHRIFGYNCNLSPQYYTMYRLKNCLNMLQKRLS
FSVLYGAMGGHIHDKVPRRSEKD*KRVK*SVGRLSSYVT*PGVSTTHHGLYQ*G*NAKVI
*FERTWKNR**CVTVLS

>GCiWno456_a24.b1 CHROMAT_FILE: GCiWno456_a24.b1 PHD_FILE: GCiWno456_a24.b1.phd.1
           CHEM: term DYE: big TIME: Fri Oct 12 11:21:16 2001
           TEMPLATE: GCiWno456_a24 DIRECTION: fwd
          Length = 933

 Score = 60.5 bits (144), Expect = 3e-09
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +3

Query: 1   KIENELNEVLDDYLPTLHDQESLPHTM 27
           KIENELNEVLDDYLPTLHDQESLPHTM
Sbjct: 702 KIENELNEVLDDYLPTLHDQESLPHTM 782

>GCiWno456_a24.b1_1
C*LFKTRSGYLDIMC*RCSMC*MLKVCLPSLSTI*QTHRFRFFQA*TKEEQILPRRATTS
TSGS*KGTNREIKRPCFATNLK*CVHS*GRRGHSTFPTKQTKRLGLSDGL*LN**PHRKY
F*YN*KGSKLDSSNYQRLGTR*HINGVGWGRWDTSHLVVNKNRI*NCIFATSIDRC*LFK
TQDIWL*L*SFPTVLYDV*VKKLLKHVAKKVIILCTLWRYGWSHT*XSTQKK*KRLKTS*
MKCWTTIFLRYMTRSLYHTPWAFINEVRMAXVSXLTHLXKSLMMCYRAEVCARMSIAHGT
LVESRL*VQS*
>GCiWno456_a24.b1_2
VNCLKHDQDIWILCVKGVPCVKC*RCVFPRSLLYNRHIVSDSSKRKQRKSRFCQDELPPP
PLVLKKVQTGK*NAHALRPI*NNVSTHRVEEVIQHFQPNKLNDLASVMVSDLTNDPTENI
SNITEKDRNSIAAIINDLVQGNT*TV*GGEDGTPLI**LIKTEYKTVSSRLP*TVVNCLK
HRIFGYNCNLSPQYYTMYRLKNCLNMLQKRLSFSVLYGAMGGHIHDXVPRRSEKD*KRVK
*SVGRLSSYVT*PGVSTTHHGPLSMRLEWXKYXY*RTWXNR**CVTVLRSVPVCQLHTGP
**KVGYKCKV
>GCiWno456_a24.b1_3
LIV*NTIRIFGYYVLKVFHVLNVKGVSSLALYYITDTSFQILPSVNKGRADFAKTSYHLH
LWFLKRYKPGNKTPMLCDQFKIMCPLIG*KRSFNISNQTN*TTWPQ*WSLT*LMTPQKIF
LI*LKRIETR*QQLSTTWYKVTHKRCRVGKMGHLSFSS**KQNIKLYLRDFHRPLLIV*N
TGYLVIIVIFPHSTIRCIG*KIA*TCCKKGYHSLYSMALWVVTYMIXYPEEVKKIENELN
EVLDDYLPTLHDQESLPHTMGLYQ*G*NGXSIXIDAPGKIANDVLPC*GLCPYVNCTRDL
SRK*AISAKL

First walk
>GCiWno151_b22.b1_1
FGS*TAFQ*NDCTIMRHRMFPIILPLILALISCALCAMGKPMILTARLFYIIFLVFIFVI
FVFFGSYIYNFWFLYTPRHALL*P*KLFATGIQQFD*NEPTLHGQLVKIDIARHDPTCRS
KHMYSGILKLIEWSKMGHLFILFSSSNW**TKNIQRIIKPFRYDFHIRCC*LFKTRSGYL
DIMC*RCPMC*MLKVCLPSLSTI*QTHRFRFFQA*TKEEQILPRRATTSTSGS*KGTNRE
IKRPCLRPI*NNVSTHRVEEVIQHFQPNKLNDLASVMVSDLTNDPTGNISNITEXGSNSI
APFX
>GCiWno151_b22.b1_2
SGHRLLSSKTTARSCVIECFQ*YYR*YWP*FPVHCVLWGNL*F*QQGCFISFFWFLFS*F
LFFLVLIYIIFGSYIRQGMLFCNHENFLQQEFNNLIEMSRHYTDNLSKSILRDMIPLAEV
NTCILVF*N**SGVRWVTFSFYFLVRIGNKRRTFKEL*NRFVTTSIYAVVNCLKHDQDIW
ILCVKGVPCVKC*RCVFPRSLLYNRHIVSDSSKRKQRKSRFCQDELPPPPLVLKKVQTGK
*NAHACDQFKIMCPLIG*KKSFNISNQTN*TTWPQ*WSLT*LMTPQEIFLI*LXKDRTR*
HHF
>GCiWno151_b22.b1_3
RVIDCFPVKRLHDHAS*NVSNNITANTGPNFLCTVCYGETYDFNSKVVLYHFFGFYFRNF
CFFWFLYI*FLVLIYAKACSFVTMKTFCNRNSTI*LK*ADITRTTCQNRYCAT*SHLQK*
THVFWYFKIDRVE*DGSPFHSIF*FELVINEEHSKNYKTVSLRLPYTLLLIV*NTIRIFG
YYVLKVSHVLNVKGVSSLALYYITDTSFQILPSVNKGRADFAKTSYHLHLWFLKRYKPGN
KTPMLATNLK*CVHS*GRRSHSTFPTKQTKRLGLSDGL*LN**PHRKYF*YN*XRIELDS
TI

>GCiWno454_k20.b1 CHROMAT_FILE: GCiWno454_k20.b1 PHD_FILE: GCiWno454_k20.b1.phd.1
           CHEM: term DYE: big TIME: Fri Oct 12 11:14:25 2001
           TEMPLATE: GCiWno454_k20 DIRECTION: fwd
          Length = 928
Score = 42.2 bits (97), Expect = 0.004
 Identities = 17/24 (70%), Positives = 20/24 (82%)
 Frame = -3

Query: 72  SWLQERCYKRPTLFKGMGKLPVDN 95
           SW+QERCY+RP LFK MG L VD+
Sbjct: 875 SWVQERCYQRPPLFKXMGXLQVDD 804


 Score = 36.4 bits (82), Expect(2) = 7e-29
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = -3

Query: 91  LPVDNTIRIFGYYVLKVFHVL 111
           L V NTIRIFGYYVLKV HVL
Sbjct: 230 LIV*NTIRIFGYYVLKVSHVL 168


 Score =  112 bits (277), Expect(2) = 7e-29
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = -2

Query: 115 GVSSLALYYITDTSFQILPSVNKGRADFAKTSYHLHLWFLKRYKPGNKTPML 166
           GVSSLALYYITDTSFQILPSVNKGRADFAKTSYHLHLWFLKRYKPGNKTPML
Sbjct: 168 GVSSLALYYITDTSFQILPSVNKGRADFAKTSYHLHLWFLKRYKPGNKTPML 13

>GCiWno454_k20.b1
TAAATTGGTCGCAAGCATGGGCGTTTTATTTCCCGGTTTGTACCTTTTTAAGAACCAGAGGTGGAGGTGGTAGCTCGTCT
TGGCAAAATCTGCTCTTCCTTTGTTTACGCTTGGAAGAATCTGAAACGATGTGTCTGTTATATAGTAGAGAGCGAGGGAA
GACACACCAACACATGGGACACCTTTAACACATAATATCCAAATATCCTGATCGTGTTTTAAACAATTAACAACAGCGTA
TATGGAAGTCGCAAGGAAACGGTTTTATAATTCTTTGAATGTTCTTCGTTTATTACCAATTCGAACTAGAAAATAGAATG
AAAAGGTGACCCATCTTTCCCCACTCTATCAATTTTAAAATAACAGAATACATGTGTTTACTTCTGCAAGTGGGATCATG
TCGCGCAATATCGATTTTGACAAGTTGTCCGTGTAATGTCGGCTCATTTCAATCAATTTGTTGAATTCCTGTTGCAAAAA
GTTTTCATGGTTACGAAAGAGCATGACTTGGCGTATATGAGAACCAAAAATTATATATATAAGAACCAAAAAAAACAAAA
ATTACGTATATAAAAACAAAAAAAATGATATGAAACAACCTTGCTGTTGAAATCATAGGTTTCCCCATAGCACACAGTGC
ACAGGAAATTTGCGACTGTCTTTAGTGACATATCTTNCTGCAAGTTCTGACCATCGCCACCTTTNCTCTATTCTGGATCA
TATAAACAAGCACAGATCCGATGNNCGTCGTCATAAGATCTTTCATTTCATTGGTGTTTGAGATACTGCATAAAGTCTGT
ACCATCGTCGACTTGTAGTTNACCCATTNCCTTAAACAACGGGGGTCGTTGGTAACACCGCTCTTGCACCCANGAACCAG
TCTTTCGATGCAAACTTGCGACGAACTGGAAGAAAACTTCCTTTATCG
>GCiWno454_k20.b1_4
DKGSFLPVRRKFASKDWFXGARAVLPTTPVV*GNGXTTSRRWYRLYAVSQTPMK*KIL*R
RXSDLCLFI*SRIEXRWRWSELAXRYVTKDSRKFPVHCVLWGNL*FQQQGCFISFFLFLY
T*FLFFLVLIYIIFGSHIRQVMLFRNHENFLQQEFNKLIEMSRHYTDNLSKSILRDMIPL
AEVNTCILLF*N**SGERWVTFSFYFLVRIGNKRRTFKEL*NRFLATSIYAVVNCLKHDQ
DIWILCVKGVPCVGVSSLALYYITDTSFQILPSVNKGRADFAKTSYHLHLWFLKRYKPGN
KTPMLATNL
>GCiWno454_k20.b1_5
R*RKFSSSSSQVCIERLVXGCKSGVTNDPRCLRXWVNYKSTMVQTLCSISNTNEMKDLMT
TXIGSVLVYMIQNRXKVAMVRTCXKICH*RQSQISCALCAMGKPMISTARLFHIIFFVFI
YVIFVFFGSYIYNFWFSYTPSHALS*P*KLFATGIQQID*NEPTLHGQLVKIDIARHDPT
CRSKHMYSVILKLIEWGKMGHLFILFSSSNW**TKNIQRIIKPFPCDFHIRCC*LFKTRS
GYLDIMC*RCPMCWCVFPRSLLYNRHIVSDSSKRKQRKSRFCQDELPPPPLVLKKVQTGK
*NAHACDQFX
>GCiWno454_k20.b1_6
IKEVFFQFVASLHRKTGSWVQERCYQRPPLFKXMGXLQVDDGTDFMQYLKHQ*NERSYDD
XHRICACLYDPE*XKGGDGQNLQXDMSLKTVANFLCTVCYGETYDFNSKVVSYHFFCFYI
RNFCFFWFLYI*FLVLIYAKSCSFVTMKTFCNRNSTN*LK*ADITRTTCQNRYCAT*SHL
QK*THVFCYFKIDRVGKDGSPFHSIF*FELVINEEHSKNYKTVSLRLPYTLLLIV*NTIR
IFGYYVLKVSHVLVCLPSLSTI*QTHRFRFFQA*TKEEQILPRRATTSTSGS*KGTNREI
KRPCLRPIX
>GCiWno456_a24.b1
TGTTAATTGTTTAAAACACGATCAGGATATTTGGATATTATGTGTTAAAGGTGTTCCATGTGTTAAATGTTAAAGGTGTG
TCTTCCCTCGCTCTCTACTATATAACAGACACATCGTTTCAGATTCTTCCAAGCGTAAACAAAGGAAGAGCAGATTTTGC
CAAGACGAGCTACCACCTCCACCTCTGGTTCTTAAAAAGGTACAAACCGGGAAATAAAACGCCCATGCTTTGCGACCAAT
TTAAAATAATGTGTCCACTCATAGGGTAGAAGAGGTCATTCAACATTTCCAACCAAACAAACTAAACGACTTGGCCTCAG
TGATGGTCTCTGACTTAACTAATGACCCCACAGAAAATATTTCTAATATAACTGAAAAGGATCGAAACTCGATAGCAGCA
ATTATCAACGACTTGGTACAAGGTAACACATAAACGGTGTAGGGTGGGGAAGATGGGACACCTCTCATTTAGTAGTTAAT
AAAAACAGAATATAAAACTGTATCTTCGCGACTTCCATAGACCGTTGTTAATTGTTTAAAACACAGGATATTTGGTTATA
ATTGTAATCTTTCCCCACAGTACTATACGATGTATAGGTTAAAAAATTGCTTAAACATGTTGCAAAAAAGGTTATCATTC
TCTGTACTCTATGGCGCTATGGGTGGTCACATACATGATANAGTACCCAGAAGAAGTGAAAAAGATTGAAAACGAGTTAA
ATGAAGTGTTGGACGACTATCTTCCTACGTTACATGACCAGGAGTCTCTACCACACACCATGGGCCTTTATCAATGAGGT
TAGAATGGCANAAGTATCNNTATTGACGCACCTGGNAAAATCGCTAATGATGTGTTACCGTGCTGAGGTCTGTGCCCGTA
TGTCAATTGCACACGGGACCTTAGTAGAAAGTAGGCTATAAGTGCAAAGTTAA

>GCiWno456_a24.b1_1
C*LFKTRSGYLDIMC*RCSMC*MLKVCLPSLSTI*QTHRFRFFQA*TKEEQILPRRATTS
TSGS*KGTNREIKRPCFATNLK*CVHS*GRRGHSTFPTKQTKRLGLSDGL*LN**PHRKY
F*YN*KGSKLDSSNYQRLGTR*HINGVGWGRWDTSHLVVNKNRI*NCIFATSIDRC*LFK
TQDIWL*L*SFPTVLYDV*VKKLLKHVAKKVIILCTLWRYGWSHT*XSTQKK*KRLKTS*
MKCWTTIFLRYMTRSLYHTPWAFINEVRMAXVSXLTHLXKSLMMCYRAEVCARMSIAHGT
LVESRL*VQS*
>GCiWno456_a24.b1_2
VNCLKHDQDIWILCVKGVPCVKC*RCVFPRSLLYNRHIVSDSSKRKQRKSRFCQDELPPP
PLVLKKVQTGK*NAHALRPI*NNVSTHRVEEVIQHFQPNKLNDLASVMVSDLTNDPTENI
SNITEKDRNSIAAIINDLVQGNT*TV*GGEDGTPLI**LIKTEYKTVSSRLP*TVVNCLK
HRIFGYNCNLSPQYYTMYRLKNCLNMLQKRLSFSVLYGAMGGHIHDXVPRRSEKD*KRVK
*SVGRLSSYVT*PGVSTTHHGPLSMRLEWXKYXY*RTWXNR**CVTVLRSVPVCQLHTGP
**KVGYKCKV
>GCiWno456_a24.b1_3
LIV*NTIRIFGYYVLKVFHVLNVKGVSSLALYYITDTSFQILPSVNKGRADFAKTSYHLH
LWFLKRYKPGNKTPMLCDQFKIMCPLIG*KRSFNISNQTN*TTWPQ*WSLT*LMTPQKIF
LI*LKRIETR*QQLSTTWYKVTHKRCRVGKMGHLSFSS**KQNIKLYLRDFHRPLLIV*N
TGYLVIIVIFPHSTIRCIG*KIA*TCCKKGYHSLYSMALWVVTYMIXYPEEVKKIENELN
EVLDDYLPTLHDQESLPHTMGLYQ*G*NGXSIXIDAPGKIANDVLPC*GLCPYVNCTRDL
SRK*AISAKL

>GCiWno59_g04.g1
CAATTTGAGCTCTGTAAAAAGTTATATACATGATAAAGTACCCAGAAGAAGTGAAAAAGATTGAAAACGAGTTAAATGAA
GTGTTGGACGACTATCTTCCTACGTTACATGACCAGGAATCTCTACCACACACCATGGCCTTTATCAATGAGGTTAGAAT
GCAAAAGTTATCTAATTTGAACGCACCTGGAAAAATCGCTAATGATGTGTTACCGTGCTGAGTTCTGTGCCCGTATGTCA
ATTGCACAACGGACCTTAAGTAGAAAGTAGGCTATAAAGTGCAAAGTTAATAACTTAAAAATGTCAGTTTCGATTTGAGC
ACAATATGTGTTTTTGGATGTAGCAATTGCTTTAGAGTTTAGACAGAAGCGTGCTATTGTTTTTTTAGGTTTTGAGATGC
AGACCGAGCCTTCCATTGGCGGTACCGCATTCAGCTACGGAGGATACCAAGCTCGGTGGATACGACATCAGCAAAGACAC
GATGGTGGTAGCAAGTTTATATTCAGCAAATCGTGACCCAAAAGTGTGGGCGAACCCGGACCAATTTGACCCAAGTCGAT
TTTTAGCCAAAGATGATTTGGGTGTGACAGTGTTGGATGAAACGAAAGTGGAACAAGTATTCACATTCTCTTTGGGGGAC
CGAAAATGTCCAGGCGAAGACATCGGAAGATCATTTCTTTTCTTAACCACAGCGTACCTCGCGCATACTTGCAAGTTAAA
GCCAGACTCAGCCAAACCACCAACTTTTCAAACTAAGCCTGGTTCGATAACCAGACCAAAAGATTTTGGTGGTCAGCTTA
ATGTTAAAAAATGTTGGCTGGGCGTGTTTAAGCCAGATGATACCGAAGAGTTAGAAGATGTCAACAGAAAGTGAAAGCAT
GNACCATCCTACCCCAACTGCTATTATTAGGGGGAGTAGCATCCAAAATCGCTTTCATATAATTAAACCT

>GCiWno59_g04.g1_1
QFELCKKLYT**STQKK*KRLKTS*MKCWTTIFLRYMTRNLYHTPWPLSMRLECKSYLI*
THLEKSLMMCYRAEFCARMSIAQRTLSRK*AIKCKVNNLKMSVSI*AQYVFLDVAIALEF
RQKRAIVFLGFEMQTEPSIGGTAFSYGGYQARWIRHQQRHDGGSKFIFSKS*PKSVGEPG
PI*PKSIFSQR*FGCDSVG*NESGTSIHILFGGPKMSRRRHRKIISFLNHSVPRAYLQVK
ARLSQTTNFSN*AWFDNQTKRFWWSA*C*KMLAGRV*AR*YRRVRRCQQKVKAXTILPQL
LLLGGVASKIAFI*LNL
>GCiWno59_g04.g1_2
NLSSVKSYIHDKVPRRSEKD*KRVK*SVGRLSSYVT*PGISTTHHGLYQ*G*NAKVI*FE
RTWKNR**CVTVLSSVPVCQLHNGP*VESRL*SAKLIT*KCQFRFEHNMCFWM*QLL*SL
DRSVLLFF*VLRCRPSLPLAVPHSATEDTKLGGYDISKDTMVVASLYSANRDPKVWANPD
QFDPSRFLAKDDLGVTVLDETKVEQVFTFSLGDRKCPGEDIGRSFLFLTTAYLAHTCKLK
PDSAKPPTFQTKPGSITRPKDFGGQLNVKKCWLGVFKPDDTEELEDVNRK*KHXPSYPNC
YY*GE*HPKSLSYN*TX
>GCiWno59_g04.g1_3
I*AL*KVIYMIKYPEEVKKIENELNEVLDDYLPTLHDQESLPHTMAFINEVRMQKLSNLN
APGKIANDVLPC*VLCPYVNCTTDLK*KVGYKVQS**LKNVSFDLSTICVFGCSNCFRV*
TEACYCFFRF*DADRAFHWRYRIQLRRIPSSVDTTSAKTRWW*QVYIQQIVTQKCGRTRT
NLTQVDF*PKMIWV*QCWMKRKWNKYSHSLWGTENVQAKTSEDHFFS*PQRTSRILAS*S
QTQPNHQLFKLSLVR*PDQKILVVSLMLKNVGWACLSQMIPKS*KMSTESESMXHPTPTA
IIRGSSIQNRFHIIKP

>_4
FCTLCAMGGHIHDKVPEE*KRLKTS*MKCWTTIFLRYMTRSLYHTPWPLSMRLECKSYLI
*THLEKSLMMCYRAEFCARMSIAQRTLSRK*AIKCKVNNLKMSVSI*AQYVFLGGAIALE
FRQKRAIVFLGFEMQTEPSIGGTAFSYGGYQARWIRHQQRHDGGSKFIFSKS*PKSVGEP
GPI*PKSIFNQR*FGCESVG*NKSGTSVHILFGGSKMSRRRHRKIISFLNHSVPCAYLQV
KARPSQTTNFSN*AWFDNQTKRFWRSA*C*KILAGRFK
>_5
XLYSMRYGWSHT**STRRVK KIENELNEVLDDYLPTLHDQESLPHTMAFINEVRMQKLSN
LNAPGKIANDV LPC*VLCPYVNCTTDLK*KVGYKVQS**LKNVSFDLSAICVFGWSNCFR
V*TEACYCFFRF*DADRAFHWRYRIQLRRIPSSVDTTSAKTRWW*QVYIQQIVTQKCGRT
RTNLTQVDF*PKMIWV*KCWMKQKWNKCSHSLWGIENVQAKTSEDHFFS*PQRTLRILAS
*SQTQPNHQLFQLSLVR*PDQKILAFSLMLKNFGWAF*X
>_6
SVLYALWVVTYMIKYQKSEKD*KRVK*SVGRLSSYVT*PGVSTTHHGLYQ*G*NAKVI*F
ERTWKNR**CVTVLSSVPVCQLHNGP*VESRL*SAKLIT*KCQFRFERNMCFWVEQLL*S
LDRSVLLFF*VLRCRPSLPLAVPHSATEDTKLGGYDISKDTMVVASLYSANRDPKVWANP
DQFDPSRFLTKDDLGVKVLDETKVEQVFTFSLGDRKCPGEDIGRSFLFLTTAYLAHTCKL
KPDPAKPPTFPTKPGSITRPKDFGVQLDVKKFWLGVLX

>sequence 16 48% to 1A1
EENLVNCLVDIYTAGTDAPTNVILWAIVTLLHKPNLQHLLFHEINNKT (1)
NSNEDLSNRWPLLKAFIQENFRFNPPAPLSIPHQTNQGVKLDKYFIPKDTM
IISNIYAVNHDPKIWKNPYEFNIYRHIDTDGKFVPSTKVIAFGIGCRSCLG
EKLGRLEIFYFLANMIKRFEILPDPGSKDLP
PINEGGNSILHLPIHFKVVFKPRENEDYFSL*
DEV8425.x1   
LQW263226.x1 
GCiWno1017_n21.b1
GCiWno153_h17.g1

>GCiWno268_l16.b1_4
XARHWSLTXCARIGILPQHWGGFYPIIDLNNLKPIPLSRK*AITKYITVAMLHIFVILNH
HTQEENLVNCLVDIYTAGTDAPTNVILWAIVTLLHKPNLQHLLFHEINNKTSKFKNRYCR
VRERLDTFSLYFLVPVL*FFENCTFIFNECSWFTTKWEEKIECKDFSCFPTVLYKHSYTI
VYLQL*NSFAIL*KYFLPKISLSVQSIIC*MQQKNLDSNEDLSNRWPLLKAFIQENFRFN
PPAPLSIPHQTNQGVKLDKYFIPKDTMVSFINTGVSHFSTAIQAMSHDPCQSFYLAKQG*
GSD
>GCiWno268_l16.b1_5
GTPLVLNDXCQDWHTTPTLGGVLPHHRPQQFETYTTFPKVSDHKIYYSRHVTYIRYLKPP
YTGGELGQLPCRYLHCRDRRTN*RYSMGYSHTPTQTQSPASPVSRNKQ*NK*V*K*IL*G
EGKIGHLFLIFSRPSFIIL*KLHFYIQ*MFLVYYQMGRKNRM*RFLMFPNRTI*T*LYNR
ILTIVKQLCYTLKIFSPKDIPLCPEYYMLNATKKFRFQ*RPEQQMAITESFYSRKLSF*P
TSTLEHTPSN*SRC*T*QILHPKRYHG*FH*HWCFSF*YCHSGYEP*SVPVVLPGKARLR
IRX
>GCiWno268_l16.b1_6
WHAIGP*RXVPGLAYYPNTGGGSTPS*TSTI*NLYHFPESKRSQNILQSPCYIYSLS*TT
IHRRRTWSTAL*IFTLQGQTHQLTLFYGL*SHSYTNPISSISCFTK*TIKQVSLKIDIVG
*GKDWTPFPYIFSSQFYNSLKIALLYSMNVLGLLPNGKKK*NVKISHVSQPYYINIVIQS
YTYNCKTALLYFKNIFSQRYPSLSRVLYVKCNKKI*IPMKT*ATDGHY*KLLFKKTFVLT
HQHP*AYPIKLIKVLNLTNTSSQKIPWLVSLTLVFLILVLPFRL*AMIRASRFTWQSKAK
DPT

>GCiWno268_l16.b1
GTCGGATCCTTAGCCTTGCTTTGCCAGGTAAAACGACTGGCACGGATCATGGCTCATAGCCTGAATGGCAGTACTAAAAT
GAGAAACACCAGTGTTAATGAAACTAACCATGGTATCTTTTGGGATGAAGTATTTGTCAAGTTTAACACCTTGATTAGTT
TGATGGGGTATGCTCAAGGGTGCTGGTGGGTTAAAACGAAAGTTTTCTTGAATAAAAGCTTTCAGTAATGGCCATCTGTT
GCTCAGGTCTTCATTGGAATCTAAATTTTTTTGTTGCATTTAACATATAATACTCTGGACAGAGAGGGATATCTTTGGGA
GAAAATATTTTTAAAGTATAGCAAAGCTGTTTTACAATTGTAAGTATACGATTGTATAACTATGTTTATATAGTACGGTT
GGGAAACATGAGAAATCTTTACATTCTATTTTTTCTTCCCATTTGGTAGTAAACCAAGAACATTCATTGAATATAAAAGT
GCAATTTTCAAAGAATTATAAAACTGGGACGAGAAAATATAAGGAAAAGGTGTCCAATCTTTCCCTCACCCTACAATATC
TATTTTTAAACTTACTTGTTTTATTGTTTATTTCGTGAAACAGGAGATGCTGGAGATTGGGTTTGTGTAGGAGTGTGACT
ATAGCCCATAGAATAACGTTAGTTGGTGCGTCTGTCCCTGCAGTGTAAATATCTACAAGGCAGTTGACCAAGTTCTCCTC
CTGTGTATGGTGGTTTAAGATAACGAATATATGTAACATGGCGACTGTAATATATTTTGTGATCGCTTACTTTCGGGAAA
GTGGTATAGGTTTCAAATTGTTGAGGTCTATGATGGGGTAGAACCCCCCCCAGTGTTGGGGTAGTATGCCAATCCTGGCA
CANATCGTTAAGGACCAATGGCGTGCCAN

>GCiWno511_b09.g1_4
MSCLLPNGXKNRMKISHVPNRTI*HSYQSYTYNCKPAXLYFKNXFSQRYPSLSRVLYVKC
NKKI*IPMKT*ATDGHY*KLLFKKTFVLTHQHP*AYPIKLIKVLNLTNTSSQKIPWLVSL
TLVFLN*VCHLGNRWYLSLAVKKIYVMNRYQQ*KPLLLPSGISCVMLFYAVKAHPRKI**
YPTPLRGG*RACL*LRMASKLVAATIVDVCVFGQDTYLQLL*PRGD*WFVQSVSHTQITI
THKLHVWSIVSGHEAYETYNILVYEKYESITLAFKDIHL*THATL*KNFLSDNFEHIRSQ
PYPKIGRIRTS
>GCiWno511_b09.g1_5
XVLFTTKWKXK*NEDFSCSQPYYIT*LSIVYLQL*TSXAIL*KYXLPKISLSVQSIIC*M
QQKNLDSNEDLSNRWPLLKAFIQENFRFNPPAPLSIPHQTNQGVKLDKYFIPKDTMVSFI
NTGVSQLSLPFGE*MVP*PSCQENICHESLPAVKALVATFGDLMCHVVLRCESSPAQNII
IPDAAAWWLARLPLTQNGFKAGRCYHCGRMCLWARHLFTTALTQR*LMVCSICQPYTDHN
HPQITCVVNRKWARGVRNI*HPCVRKIRKHNTGF*RYSFMNTCNLIKKLSFR*FRTYTQS
TISKNRKNPYEX
>GCiWno511_b09.g1_6
CLVYYQMEXKIE*RFLMFPTVLYNIVINRILTIVNQLCYTLKIXSPKDIPLCPEYYMLNA
TKKFRFQ*RPEQQMAITESFYSRKLSF*PTSTLEHTPSN*SRC*T*QILHPKRYHG*FH*
HWCFSIKFAIWGIDGTLA*LSRKYMS*IVTSSKSPCCYLRGSHVSCCFTL*KLTRAKYNN
TRRRCVVVSAPASNSEWLQSWSLLPLWTYVSLGKTLIYNCSNPEVTNGLFNLSAIHRSQS
PTNYMCGQS*VGTRRTKHITSLCTKNTKA*HWLLKIFIYEHMQPYKKTFFQIISNIYAVN
HIQKSEESVRV


>GCiWno410_g02.b1_4
LLRGSAIRA*HXLRFICAVDSWVSSY*KTLALISCVMLFYAGKLTGAKYNNTRRRCVVVS
GPASNSEWLQSWSLLPLWTYVSLGKTLIYNCSNPEVTNGLFNLSAIHRSQSPTNYMCGQS
*VGTRRTKHITSLCTKNTKA*HWLLKLFIYEHMQPYKITFFQIISNIYAVNHDPKIWKNP
YEFNIYRHIDTDGKFVPSTKVIAFGIGCRSCLGEKLGRLEIFYFLANMIKRFEILPDPGS
KDLPPINEGGNSILHLPIHFKVVFKPRENEDYFSL*ITPRP*YIVNSI*P*SCRRLTCKQ
SMIQ
>GCiWno410_g02.b1_5
ATSGECHQGLTXVEVHLCGG*LGVELLKNSGLNLMCHVVLRWKAHRRKI**YPTPLRGG*
RACL*LRMASKLVAATIVDVCVFGQDTYLQLLQPRGD*WFVQSVSHTQITITHKLHVWSI
VSGHEAYETYNILVYEKYESITLAFKVIHL*THATL*NNFLSDNFEHIRSQP*SKNLEES
VRVQHLSSHRYRRKVCSFNESNRVWNRMQIVSW*ETRSS*NLLLSC*HD*EV*NPS*SRE
QRSSSN*RGRQQHSSFANPF*SCFQTPRKRRLFFTINYTTTLVYSQQYMTMIVPSFNLQT
VYDPX
>GCiWno410_g02.b1_6
GYFGGVPSGPNXC*GSFVRWIAGCRVTEKLWP*SHVSCCFTLESSPAQNIIIPDAAAWWL
AGLPLTQNGFKAGRCYHCGRMCLWARHLFTTAPTQR*LMVCSICQPYTDHNHPQITCVVN
RKWARGVRNI*HPCVRKIRKHNTGF*SYSFMNTCNLIK*LSFR*FRTYTQSTMIQKSGRI
RTSSTFIVTSIQTESLFLQRK*SRLESDADRVLVRNSVVLKSFTFLLT*LRGLKSFLIPG
AKIFLQLTREATAFFICQSILKLFSNPEKTKIIFHYKLHHDPSI*STVYDHDRAVV*PAN
SL*SX

>GCiWno1017_n21.b1
ATGTGTCTTTGGGCAAGACACTTATTTACAACTGCTCCAACCCAGAGGTCACTAATGGTTTGTTCAATCTGTCAGCCATA
CACAGATCACAATCACCCACAAATTACATGTGTGGTAAATCGTAAGTGGGCACGAGGCGTACGAAACATATAACATCCTT
GTGTACGAAAAATACGAAAACATATAACAACCACTGGCTTTTAAAGTTATTCATTTATGAACACATGCAACCTTATAAAA
TAACTTTCTTTCAGATAATTTCGAACATATACGCAGTCAACCATGATCCAAAAATCTGGAAGAATCCGTACGAGTTCAAC
ATTTATCGTCACATCGATACAGACGGAAAGTTTGTTCCTTCAACGAAAGTAATCGCGTTTGGAATCGGATGCAGATCGTG
TCTTGGTGAGAAACTCGGTCGTCTTGAAATCTTCTACTTTCTTGCTAACATGATTAAGAGGTTTGAAATCCTTCCTGATC
CCGGGAGCAAAGATCTTCCTCCAATTAACGAGGGAGGGCACAGCATTCTTCCTTTGCCCATCCATTTTAAAGTTGCCCTC
CAACCCCCAGAGAACGACCAACATTTTTCCCTATCACACTACCCCTCTAAACCAGGTGATACATTACCGCTTGCCCGACG
AGACAAAATCTTTAATTCATTTCACGCTCCCCCCCTCGAATAAAACATATTCACCGCCCCCTGCAATTAACACACAAGCC
CCTGCATAAAAATAATTCCGCGGAAGCACCACCACCCCCCCACTAGGTGTTTACGACCAAATTTTCTTCTTTGTAAAAGC
ATGGGCCGGGAAGAACCAGAGCCCCCCCCTATCGGCCCCCCACCCGCTGTGGCACTGGGAGCGTACCCCCTCGCCCGTGT
CAAAAAACCACA

IISNIYAVNHDPKIWKNPYEFNIYRHIDTDGKFVPSTKVIAFGIGCRSCLG
EKLGRLEIFYFLANMIKRFEILPDPGSKDLP
PINEGGNSILHLPIHFKVVFKPRENEDYFSL*

>sequence 17 2 accessions 71% to 2J2
RPLLPKLARKYGPIFTITAGYRRVVFLVGYDLIKE (0?)
VITDRAKDFASRCPNMPGRIVRGEGLD (1?)
GIAAAPYGPKWMANRKFFYSAMRT
MGLGKRGIEKCVVDEIPYIVEELEKLCTKNELFE
PSSVFDSAVLNVLAYFTFGNRYSYQDEKFKELIHINND
FFQKAKFLNQPLFFLLSLVPGLHKYWLPQCGKDLKESVGKIN
KFVKAEIEQHRQNFDRKNPRDYIDCYLKELDQMNDQSELSEL (1?)
GLEMSIMDLFQAGTETTSITLRWAILYMVNNPNIQSKII
LQW177698.x1  
LQW103752.x1  
ciht036p01
GCiWno478_p11.g1 look for N-term on minus strand

>LQW177698.x1
>lcl|LQW177698.x1 CHROMAT_FILE: LQW177698.x1 PHD_FILE: LQW177698.x1.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 14:01:44 2001 TEMPLATE: LQW177698 DIRECTION: fwd 
GGGCAGTGCAGCTTGCTGCTGTGTGTCAGACTCTAGAGGATCCCCATAATTTAGTCTAAACCCCAGGTCCCATGGCACGC

TTCGTAGTATGCCTTCACCCCTTACCCATGTAAAACACAGAAGCGTAAAAAGTGATTACAATATGCCTTACTTTAAACAT

GTAGATTAATGATCATGTAAAAAAAAAATTTTTTTAAATTTGGCCCAAACCCAGGTCCCATGGCCTGGACTGTGCCTCAC

CGATACAGGATCAAAAACTTTAAAAAAAACCTAAAAACAATGATTTTACTTTGTATATTTGGGTTGTTAACCATGTATAA

GATTGCCCAACGTAAAGTAGTTGACGTAGTTTCAGTTCCAGCTTGAAATAAATCCATGATCGACATTTCCAAACCTGAGA

AGCAAAAAGAATGAGAGAATGTAATTTATTTTATATCTGCGTTCACCATAACGAAGAACGGTAAAGTTTACAACAGCGAA

AAGACGCTTAAAACAGAAACAAAATAACGCTATGGATAAAAAGCTTGACTGTTACTCCCAAAAGAACAAGAACATATCAA

TGAAGGCTATTTTAAACAAAGAGTGAAATTAAGTAAAATAAATGCTGTACAGGCGCTGTGGTAAAGTGGTTAGCACGCAG

AATTTACTGGTTTAGGGTCTATACTGGTTACATTGTTGAAGGTTGAAATGTGTTGTTCAGTTACAATCTATTATCACTTA

CAGGTCCGATGATCGGCTGATCATCAATTGATTAGCCTTGGAATACGCAATAATTCTGATTTGCGGCAGATCTCTCAGTG

TCACCTAGTTACATTGTCCTCCATGCAACCTGATACTGGATAAAAAATCGTATGGGTACGAAGAACAGTCCTGTCACCAG

AACGTTCAGGATTGGGATCCTCCACCGGCAAAGAGT

>GCiWno478_p11.g1_4
N*SNIRLTTIFIFSXQIYGGNSG*FLSAPFKMXMIRYRXSVGYVKCLSLSGKS*VLLV*M
XICVSVLLTQIPKTNENSRLSAL*ICVGVKIVLYTRLTP*PIIPVDFLII*T*YTTFYSA
NRFLCS*NPQNIALP*SHFIA*YCFFRTA*TC*KVWTHFHYYSWV*TRGVSCWL*LY*RS
EFMYLYSCIYLCN*LRDTMVRG*PFFSSFQLP*PNGPLRV*IISQINII*INITHKGKPI
KEYSKRASSAQVYDQNIHVISVRNRRVNKLSSFIYSYRLSLTEQKILHQDVPTCQEELSV
EKV*MVNVMLICK
>GCiWno478_p11.g1_5
ELV*YKTDNNFYFFXSNLRGKFRLIFKRSI*NXYD*V*GICRVRXMFVVIX*KLSVISIN
XHMRFGFINPDS*N**KLTFKCALDLRWC*NCVVYPSNPLTDYTGRFPDYLNLIYDILLR
K*IPLFIKPTKYCIAIITLYSVILFFQNCLNLLESMDPFSLLQLGIDAWCFLLAMTLLKK
*VHVFV*LYIFM*LAS*HHG*RLALL*FIPIALTQWTFTGLNYQPN*HHLNKYYPQG*TN
KRIFEASVKCSSV*SKHPCYICPQQEGK*VKFIHLFLQVITDRAKDFASRCPNMPGRIVR
GEGLDGECYVNM*X
>GCiWno478_p11.g1_6
RISLI*D*QQFLFFPFKSTGEIPVDF*ALHLKXI*LGIGXLSGTXNVCRYXVKVECY*YK
XSYAFRFY*PRFLKLMKTHV*VRFRFALVLKLCCIPV*PLDRLYR*IS*LFEPNIRHFTP
QIDSFVHKTHKILHCHNHTL*RNIVFSELPKLARKYGPIFTITAGYRRVVFLVGYDFIKE
VSSCICIVVYIYVTSFVTPWLEVSPSLVHSNCPNPMDLYGSKLSAKLTSFK*ILPTRVNQ
*KNIRSERQVLKCMIKTSMLYLSATGG*IS*VHSFILTGYH*QSKRFCIKMSQHARKNCP
WRRFRW*MLC*YVX


>ciht036p01 
          Length = 555

 Score = 46.1 bits (107), Expect = 5e-04
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = -1

Query: 221 DYIDCYLKELDQMNDQSELS 240
           DYIDCYLKELDQMNDQSELS
Sbjct: 555 DYIDCYLKELDQMNDQSELS 496

>ciht036p01
GGGTTCGATACAGGATCAAAAACTTTAAAAAAACCTAAAAACAATGATTTTACTTTGTATATTTGGGTTGTTAACCATGT
ATAAGATTGCCCAACGTAAAGTAATTGACGTAGTTTCAGTTCCAGCTTGAAATAAATCCATGATCGACATTTCCAAACCT
GAGAAGCAAAAAGAATGAGAGAATGTAATTTATTTTATCTCTGCGTTCACCATAACGAAGAACGGTAAAGTTTACAACAG
CGAAAAAACGCTTAAAACAGAAACAAAATAACGCTATGGATAAAAAGCTTGACTGTTACACCCAAAAGAACAAGAACATA
TCAATGAAAGCTACTGTAAACAAAGAGTGAAATTAAGTAAAATAAATGCTGTACAGGCGCTGTGGTAAAGTGGTTAGCAC
GCAGAGTTTACTGGTTTAGGTTCGATACTGCTACCATTGTAGAAGCTGAAAATGTGTGTGTTCAATTAAAATCTACTTTA
TCAATTACCAAGCTCCGATAGTTCGCTTTGATCATTCATCTGATCGAGCTCTTTGAGATAACAGTCAATATAATC

>ciht036p01_4 matches seq 17 and close to 206
DYIDCYLKELDQMNDQSELSELGN**SRF*LNTHIFSFYNGSSIEPKPVNSAC*PLYHSA
CTAFILLNFTLCLQ*LSLICSCSFGCNSQAFYP*RYFVSVLSVFSLL*TLPFFVMVNAEI
K*ITFSHSFCFSGLEMSIMDLFQAGTETTSITLRWAILYMVNNPNIQSKIIVFRFF*SF*
SCIEP
>ciht036p01_5
LY*LLSQRARSDE*SKRTIGAW*LIK*ILIEHTHFQLLQW*QYRT*TSKLCVLTTLPQRL
YSIYFT*FHSLFTVAFIDMFLFFWV*QSSFLSIALFCFCFKRFFAVVNFTVLRYGERRDK
INYILSFFLLLRFGNVDHGFISSWN*NYVNYFTLGNLIHG*QPKYTK*NHCF*VFLKFLI
LYRTX
>ciht036p01_6
IILTVISKSSIR*MIKANYRSLVIDKVDFN*THTFSASTMVAVSNLNQ*TLRANHFTTAP
VQHLFYLISLFVYSSFH*YVLVLLGVTVKLFIHSVILFLF*AFFRCCKLYRSSLW*TQR*
NKLHSLILFASQVWKCRSWIYFKLELKLRQLLYVGQSYTWLTTQIYKVKSLFLGFFKVFD
PVSNP

>sequence 18, 216 11 accessions similar to sequence 1 PKG to heme 52% to 2J2
MSMLVNLITNFDMSIVLTASCAFVLVFYYWYKRPRNFPPGPRGIPLLGVV
PFLGKHTEKDFRKWSKKYGPMMSVRLGQNDWIVLGDHKTINE (0)
CLVKGGNSFSGRPDHPVFKQFTKNHGVAMVDYGDHWKVQRRFGLTTLRG (2)
FGVGKRSMEDRIVEEIEYLNNAIRSHNGKPFNIS (0)
KLFANAVSNNISSIVMGERMDYSDKIFETLTQRSTES (2)
IYNSDMAGKIIRFSIFVPSLWNLLLLFSTQASKQTSVFNSIRG (1?)
QAIVNWVSQHKSTYDEHNVRDFIDAFIGEQKKETDVSFT (0)
DLQLIQYVRDLYVAGTETTTVTLRWAVRCLIHYPEKQNKLRKEIFDVI (1)
GREKTPSMKDKAQMPYTCAFMQELFRFRTLVPLGVPHKISNDVQVEGWSIPKGTW (0)
IIPNLWAVHNDPDVWDEPSKFKPERHLDEKGNFVQSKHVIPFSVGPRHCLGEQLARME
IFIFLVSMVQKFEFLPDPNEPNLPEINHGVNATVFVAYPFNIVANQV*
LQW70287.x1  exon 1 94% TO LQW171454.x1
LQW149448.x1 exon 1, 2
LQW171454.x1 exon 2, 100% match, exon 4
LQW1567.y01  exon 3
LQW1567.y1   exon 3
LQW89119.x1  exon 3
LQW89423.x1  exon 3
LQW10413.x1  exon 3, 4
LQW270517.y1 exon 4, 5, 6
LQW31946.y1  exon 5, 6
LQW171454.y2 exon 5, 6 1 diff
LQW210348.x2 exon 6
LQW164797.y1 exon 6 1 diff
LQW210348.x3 exon 6
LQW29867.x1  exon 6, 7
LQW70287.y1  exon 7
LQW164797.y1 exon 7
DEV13999.y1  exon 7, 8 
LQW197022.x1 exon 7, 8
LQW145909.y1 exon 7, 8
LQW183999.y1 exon 7, 8 ,9
LQW149448.y1 exon 8, 9
LQW186464.x1 exon 8, 9
DEV9936.x1   exon 9 1 diff, opposite end seq 203 
LQW36801.x1  exon 9
LQW1567.x1   exon 9
DEV5879.y1   exon 9

>LQW270517.y1_4 region of exon 4,5,6
KTKQTINA*VKS**EKYTGKRPEIRRCKTTHRRWEASGDGPCRNSPVKGGIGERGTFQI*
IFVCLTITRYMNSEMHLICNILVYSRCDEKSGISGPIVLHSTIYIGI*L*C*HLIETFRQ
RGFE*YIQHCYG*KNGLQ*QNI*NINPKINREV*HCLKPLFGRDL*FSIYNSDMAGKIIR
FSIFVPSLWNLLLLFSTQASKQTSVFNSIRGEVN*EIFAIVNLP*HFIVSLFCRSNRKLG
FAT*INL*RTQR*RLYRCFYWRTKERNRCFLYGINVFYTRVAGQRHFCLCTSSGMLTSYH
ECNFNVFLFLTDFLNTFFEWLLFGTR*GPAQFS
>LQW270517.y1_5
NKANDKRVGQKLVRKIHGEKT*DTKVQNNSSEMGSKWRRAMP*QSS*RWDRGKGHFPDMN
FCLFNNNTLYEF*DAFNMQYSCI*QM*REIRDKWSHRSPLYYIYRNLIVMLTFDRNFSPT
RFRIIYPALLWVKEWITVTKYLKH*PKDQPRGIALFKAIVWSRLIIFNL*QRHGGKNYSI
FYICSFFVEFASSIFNTSVKADKCFQFHSR*S*LGNIRYSKLALTLYRFFVLQKQS*IGF
RNINQLMTNTTLETLSMLLLENKRKKPMFPLRYKCILHSRGGATTFLFMHLIGHAYELPR
M*L*CVFIFNGFFKHFF*MAAIWNSLGTGSVQX
>LQW270517.y1_6
KQSKR*TRRSKASEKNTRGKDLRYEGAKQLIGDGKQVETGHAVTVQLKVG*GKGALSRYE
FLSV*Q*HVI*ILRCI*YAIFLYIADVTRNQG*VVPSFSTLLYI*ESNCNADI**KLFAN
AVSNNISSIVMGERMDYSDKIFETLTQRSTERYSIV*SHCLVETYNFQFITATWREKLFD
FLYLFLLCGICFFYFQHKRQSRQVFSIPFEVKLIRKYSL**TCLNTLSFLCFAEAIVNWV
SQHKSTYDEHNVRDFIDAFIGEQKKETDVSFTV*MYFTLAWRGNDISVYAPHRACLRVTT
NVTLMCFYF*RIF*TLFLNGCYLELVRDRLSSA

>sequence 203, 136 probably in a gene cluster with seq 18
(0) LLHNMKYLQACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAG (1) ggt
LQW134525.y1 EXXR
LQW134525.y01 EXXR 
LQW276672.y1 EXXR
LQW59936.y1 EXXR TO PKG opp = seq 18
LQW59936.y1 

           CHEM: term DYE: ET TIME: Wed Apr  4 14:48:40 2001
           TEMPLATE: LQW59936 DIRECTION: rev
          Length = 627

 Score = 85.8 bits (209), Expect = 5e-17
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = -1

Query: 1   NMKYLQACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAG 40
           NMKYLQACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAG
Sbjct: 567 NMKYLQACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAG 448

LQW276672.y1 
LQW276672.y1.phd.1 LQW276672.x1 

           12:55:25 2001 TEMPLATE: LQW276672 DIRECTION: rev
          Length = 973

 Score = 85.8 bits (209), Expect = 5e-17
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = +1

Query: 1   NMKYLQACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAG 40
           NMKYLQACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAG
Sbjct: 226 NMKYLQACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAG 345

>LQW276672.y1
>lcl|LQW276672.y1 CHROMAT_FILE: LQW276672.y1 PHD_FILE: LQW276672.y1.phd.1 CHEM: term DYE: ET TIME: Fri Aug 31 12:55:25 2001 TEMPLATE: LQW276672 DIRECTION: rev
TAGCCGGTCCTTATAGTACAATGTATATAAAACAAAATTTTGTTTGTAAAAAATGAATGAATGTGACTTTGCCAGGTAGG
GCAACGGCAGTCGTTGTGTGGTCTGTTTCATACACTTTGTGCTCCCTTTTAAGTTATACGTGTTATAGCGACTGTCTTTT
ACCGGCCACACAAGGTTAATCTATTACATTTATTCTTAGAACTTATTTTTTTGCAGTTATTGCACAACATGAAGTACTTA
CAAGCCTGTCTACGTGAAACACAACGTATGTTTCCATTTGTTAACTCGTCTCCAAGAAGATTTCGGAAAGATCTCGTCCT
TTCAGGTTATCTTATACCGGCAGGTGAGATATGTTAAGATATCTGTGTTTTAATGTATATGTGTATAATAATGTACACCT
CATGATCACTGCCAAGTTATAACATGGGTGTCTTCTTATACACCAGACACACGGTGTATTTATACACCTTATGCTCACTG
TGAAGTTATAACATGGGTGTCTTCTTATACACTAGGTACACTTGATGTATTCATACACCTCATGCTCACTGTGAAGTCAT
AACATGGGTGTCTTTTTATACACCTCATGCTCACTGTGAAGTCATAACATGGGTGTCTACTTATACACCAGAAACACCGG
TGTATTTATACACCTCATGCTCACTGTGAAGTTATAACATGGGTGTCTTCTTATACACTAGGCACACTTGATGTATTCAT
ACAGCTCATGCTCACTGTTTAGTGTGATCATAACATAGTGTCGTTTATACACCTTATTATCCTGTCGAGTCTAACTTGGA
GTCTCTTAACGCCAACATATTGGGTTCATAACCTCAGCCCATTTAGCTTACAGGGTTCCATGATACCAGGCCCGGGGGTA
AAAACGGCCTATACCATTCCTTGCATAAGGGCTAACGACCATTGTTTCCATCGTGGATCCGTGTCTGGATTTGGCTTTAA
ATCAGGTACACTC

>LQW276672.y1_1
*PVLIVQCI*NKILFVKNE*M*LCQVGQRQSLCGLFHTLCAPF*VIRVIATVFYRPHKVN
LLHLFLELIFLQLLHNMKYLQACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAGEIC*D
ICVLMYMCIIMYTS*SLPSYNMGVFLYTRHTVYLYTLCSL*SYNMGVFLYTRYT*CIHTP
HAHCEVITWVSFYTPHAHCEVITWVSTYTPETPVYLYTSCSL*SYNMGVFLYTRHT*CIH
TAHAHCLV*S*HSVVYTPYYPVESNLESLNANILGS*PQPI*LTGFHDTRPGGKNGLYHS
LHKG*RPLFPSWIRVWIWL*IRYTX
>LQW276672.y1_2
SRSL*YNVYKTKFCL*KMNECDFAR*GNGSRCVVCFIHFVLPFKLYVL*RLSFTGHTRLI
YYIYS*NLFFCSYCTT*STYKPVYVKHNVCFHLLTRLQEDFGKISSFQVILYRQVRYVKI
SVF*CICV**CTPHDHCQVITWVSSYTPDTRCIYTPYAHCEVITWVSSYTLGTLDVFIHL
MLTVKS*HGCLFIHLMLTVKS*HGCLLIHQKHRCIYTPHAHCEVITWVSSYTLGTLDVFI
QLMLTV*CDHNIVSFIHLIILSSLTWSLLTPTYWVHNLSPFSLQGSMIPGPGVKTAYTIP
CIRANDHCFHRGSVSGFGFKSGTL
>LQW276672.y1_3
AGPYSTMYIKQNFVCKK*MNVTLPGRATAVVVWSVSYTLCSLLSYTCYSDCLLPATQG*S
ITFILRTYFFAVIAQHEVLTSLST*NTTYVSIC*LVSKKISERSRPFRLSYTGR*DMLRY
LCFNVYVYNNVHLMITAKL*HGCLLIHQTHGVFIHLMLTVKL*HGCLLIH*VHLMYSYTS
CSL*SHNMGVFLYTSCSL*SHNMGVYLYTRNTGVFIHLMLTVKL*HGCLLIH*AHLMYSY
SSCSLFSVIIT*CRLYTLLSCRV*LGVS*RQHIGFITSAHLAYRVP*YQARG*KRPIPFL
A*GLTTIVSIVDPCLDLALNQVH

>LQW199445.x1
>lcl|LQW199445.x1 CHROMAT_FILE: LQW199445.x1 PHD_FILE: LQW199445.x1.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 13:55:24 2001 TEMPLATE: LQW199445 DIRECTION: fwd 
AGAAACGGCAGGCAGCTGCATTTTTCAGTTTATGAAATGATTAAAAATTAACCATTAATTTTGCTACATGTGGCAATTTG

TATTTGATTTTAGTAAAGTTGTAATTATGATGTGGATGTTTAGTGTCCTTGGCAACACACTTAATGGTATTTGCTTTTAA

AGTAAGCTTTGTTTAGCAATGTTTATGATTCTGAAATTATTTCATTTCTGCAAGCTTTTTAAAATGTCAAACAAAAAATC

AAAACTACACATGCATATAAACTGATAGGCAAGCTAATATTGTAGTCAAGCTCCATTTTCCAGTGAGCTCACTTGTGCTT

AAGCAAGACACTGAATGAACTAGTTCTTACTAATGGGTTGTTTAAAGGCATGCATAAAAAAAACGGAAAAAAATCACCCA

CAATGTTGCACAAACAGTAAGCGGGCACAATGTGTATGAAACAGAACGCCCCTATTTATAACAACTGTCATTGCGCCGCC

ACGCGAACATGCAGGGATAAATAAGTTACATTTATTCTATGATTCATAACTTAAAGGCAGGCACGCAGTGTTAAATATGG

CACCTATAAGTTATAGCGACTGTCATTGCCCCACCATGCAGGGATAAATAAGTTACATTCAAATAATAAGTTCCAGCATA

AATCAGTTAATAAGTCACATTCAATTCTCTTACCTTTCCCTTTGTCTTTCCGTCACTGATTTAGTTTCCAACCAACGTTC

AGGAATAAAAGTGTTTGGGTCGTCGTAATACTCAGGGTTCCTGCTGTTTACTGTGTTTGATGTGTCCGAATGTGGGTGCT

AAAATATAGTGAATTACCTTACGGACCTTTGGGGTTTTTCCGGGAAGTGAGCTGGGGGTTTAATACTCTG

LQW199445.x1 
LQW199445.x1.phd.1 LQW199445.y1 

           13:55:24 2001 TEMPLATE: LQW199445 DIRECTION: fwd
          Length = 870

 Score = 48.8 bits (114), Expect = 7e-06
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = -1

Query: 1   HSDTSNTVNSRNPEYYDDPN 20
           HSDTSNTVNSRNPEYYDDPN
Sbjct: 792 HSDTSNTVNSRNPEYYDDPN 733

>LQW276672.x1
>lcl|LQW276672.x1 CHROMAT_FILE: LQW276672.x1 PHD_FILE: LQW276672.x1.phd.1 CHEM: term DYE: ET TIME: Fri Aug 31 12:55:03 2001 TEMPLATE: LQW276672 DIRECTION: fwd
AAGGAATACGTGCAGGGCAGGCAATATACTTTTCATTAGTTACAAATAAGTTACACCTTATTCAATATTTATACAATGCA
GTGAAGCATCAAATTAATGCAAATAATATTGAATTACCGATGTATATTTTAACGTACACCCCTCAATAAAAATAAAATTT
ACAGACAAAAACATAAATTTACAAAAAAAATATTGGAAATATTTTACTGGCGAATTTTCCTACCATAGAAACTTCTACAT
TGCATTAATCAGTAAACATTAAAACCAATAAGCTAAATTTGTTTCATAGGAATGTGTGTCTAACTATCTCTGCCTCCCCT
GTGTTTTAAAGAGTTTGGTGAATATGTAAAGATCAATTTTTCTGCACGGCATTAATCAGTAAACAATAAACGTAAAATTT
AGATTTGTTTTACAAGAATTTGTGTCTGAAAAAATGTGTACATGTTTAAAGAAATGGTATTTCCCTATTATAAAATGTTA
GTTTTATTTTTTGTGGGTAAAGTCCCACAGTGAGGCACGCCATGGGTTCAAGGATTTAAGCCAGAGTTAGCACATTACCC
CACAAATATTAGATCAGTTTTTAAGCTTGGTGAACTTGAACTGGGGGGCTTGGGATGGGAAAGAGACGAGACGAAATGCG
ACTTTTATGGGGTCATGATGATACTCAACACGATAGTTGGATAATAGAGTGATCAGAAGTAGTTGTAATTCCTTGAATGG
AGAATTTCCGACCAGGACACATTCGCATACCAAGTCCAAAAGGTCCAGACATTATAAACTTATTATAAGCTTCATTAAAA
TTTTAAAGGGCTCGTAAGTGTCGAATGCGCATGAATTTCGTCTGCCTGCAATAAGAATATCAGGAATTCGATCTTCAAAC
CTTCTCCTCCTAAGTCTTTCCAAAAAAATTCGGAGTAGTTAAACTACGAAAGTCCTAAGTTAAAGC

LQW134525.y1 
LQW134525.y1.phd.1 LQW134525.x1 

          10:52:16 2001 TEMPLATE: LQW134525 DIRECTION: rev
          Length = 608

 Score = 83.1 bits (202), Expect = 3e-16
 Identities = 39/40 (97%), Positives = 39/40 (97%)
 Frame = +2

Query: 1  NMKYLQACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAG 40
          NMKYLQACLRETQRMFP VNSSPRRFRKDLVLSGYLIPAG
Sbjct: 17 NMKYLQACLRETQRMFPXVNSSPRRFRKDLVLSGYLIPAG 136

>LQW134525.y1
>lcl|LQW134525.y1 CHROMAT_FILE: LQW134525.y1 PHD_FILE: LQW134525.y1.phd.1 CHEM: term DYE: ET TIME: Fri May 4 10:52:16 2001 TEMPLATE: LQW134525 DIRECTION: rev
TTTTGCAGTTATGCACAACATGAAGTACTTACAAGCCTGTCTACGTGAAACACAACGTATGTTTCCATTNGTTAACTCGT
CTCCAAGAAGATTTCGGAAAGATCTCGTCCTTTCAGGTTATCTTATACCGGCAGGTGAGATATGTTAAGATATCTGTGTT
TTAATGTATATGTGTATAATAATGTACACCTCATGATCACTGCCAAGTTATAACATGGGTGTCTTCTTATACACCAGACA
CACGGTGTATTTATACACCTTATGCTCACTGTGAAGTTATAACATGGGTGTCTTCTTATACACTAGGTACACTTGATGTA
TTCATACACCTCATGCTCACTGTGAAGTCATAACATGGGTGTCTTTTTATACACCTCATGCTCACTGTGAAGTCATAACA
TGGGTGTCTACTTATACACCAGAAACACGGTGTATTTATACACCTCATGCTCACTGTGAAGTTATAACATGGGTGTCTTC
TTATACACTAGGCACACTTGATGTATTCATACACCTCATGCTCACTGTTTAGTGTTGATTATAACATAAGTGTCGTTTTA
TACACCTTATGATCACTGTCGAGTTATAACATGGAAGTCTTCTTACAC

>LQW134525.x1
>lcl|LQW134525.x1 CHROMAT_FILE: LQW134525.x1 PHD_FILE: LQW134525.x1.phd.1 CHEM: term DYE: ET TIME: Fri May 4 10:51:39 2001 TEMPLATE: LQW134525 DIRECTION: fwd
TAACAGCTAATAAAAATACGGGTGTGTATGTCAAAATATTTTGCAGCATTCAGCAGATTGTTTTGATACAACATGTGTGT
CTGATGTATAAGAAGACACCCATGTTATAACTCGAAAGTGAGCATGAGGTGTATGAATACACCATGTGTGTCTGGTGTAT
AAGAAGATACCCATGTTATAACTCGAAAGTGAGCATGAGCTGTAGGAATACACCATGTGTGTCTGGTGTATAAGAAAACA
CCCATGTTATAACGCGAAAGTGAGCCATATCATAAACAACAAACTAGTTACAAATAAACAACTTTTAATATACTTTTCAT
TATTACAAATAAGTTACACCTTATTCAATATTTATACAATGCAGTGAAGCATCAAATTTATGCAAATAATATTGAATTAC
CGATGTATATTTTAACGTACACCCCTCAATAAAAATAAAATTTACAGACAAAAACATAAATTTACAAAAAAAATATTGGA
AATATTTTACTGGCGCAATTTTCCTACCATANGAAACTTCTACATTGGGCATTAATCAGTAAACNATTTAAAACCCAATA
NNAGCTAAAT

LQW134525.y01 
LQW134525.y01.phd.1 LQW134525.x1 

          12:06:11 2001 TEMPLATE: LQW134525 DIRECTION: rev
          Length = 645

 Score = 74.5 bits (180), Expect = 1e-13
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = +1

Query: 5  LQACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAG 40
          L ACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAG
Sbjct: 10 LTACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAG 117

>LQW134525.y01
>lcl|LQW134525.y01 CHROMAT_FILE: LQW134525.y01 PHD_FILE: LQW134525.y01.phd.1 CHEM: term DYE: ET TIME: Fri May 4 12:06:11 2001 TEMPLATE: LQW134525 DIRECTION: rev
CATGAAGTACTTACAGCCTGTCTACGTGAAACACAACGTATGTTTCCATTTGTTAACTCGTCTCCAAGAAGATTTCGGAA
AGATCTCGTCCTTTCAGGTTATCTTATACCGGCAGGTGAGATATGTTAAGATATCTGTGTTTTAATGTATATGTGTATAA
TAATGTACACCTCATGATCACTGCCAAGTTATAACATGGGTGTCTTCTTATACACCAGACACACGGTGTATTTATACACC
TTATGCTCACTGTGAAGTTATAACATGGGTGTCTTCTTATACACTAGGTACACTTGATGTATTCATACACCTCATGCTCA
CTGTGAAGTCATAACATGGGTGTCTTTTTATACACCTCATGCTCACTGTGAAGTCATAACATGGGTGTCTACTTATACAC
CAGAAACACGGTGTATTTATACACCTCATGCTCACTGTGAAGTTATAACATGGGTGTCTTCTTATACACTAGGCACACTT
GATGTATTCATACACCTCATGCTCACTGTTTAGTGTTGATTATAACATAAGTGTCGTTTTATACACCCTTATAGAATCAC
TGTTCGAAGCTCTATAACCACTGGAAACGTCATTCCTTAACACGCCAGAACATACATAGTGTATTCATACACCTCATGCT
CACTG

>LQW59936.y1
>lcl|LQW59936.y1 CHROMAT_FILE: LQW59936.y1 PHD_FILE: LQW59936.y1.phd.1 CHEM: term DYE: ET TIME: Wed Apr 4 14:48:40 2001 TEMPLATE: LQW59936 DIRECTION: rev
ACTCGACAGTGATCATAAGGTGTATAAAACGACACTTATGTATAATCAACACTAAACAGTGAGCATGAGGTGTATGAATA
CATCAAGTGTGCCTAGTGTATAAGAAGACACCCATGTTATAACTTCACAGTGAGCATGAGGTGTATAAATACACCGTGTT
TCTGGTGTATAAGTAGACACCCATGTTATGACTTCACAGTGAGCATGAGGTGTATAAAAAGACACCCATGTTATGACTTC
ACAGTGAGCATGAGGTGTATGAATACATCAAGTGTACCTAGTGTATAAGAAGACACCCATGTTATAACTTCACAGTGAGC
ATAAGGTGTATAAATACACCGTGTGTCTGGTGTATAAGAAGACACCCATGTTATAACTTGGCAGTGATCATGAGGTGTAC
ATTATTATACACATATACATTAAAACACAGATATCTTAACATATCTCACCTGCCGGTATAAGATAACCTGAAAGGACGAG
ATCTTTCCGAAATCTTCTTGGAGACGAGTTAACAAATGGAAACATACGTTGTGTTTCACGTAGACAGGCTTGTAAGTACT
TCATGTTGTGCAATAACTGCAAAAAAATAAGTTCTAAGAATAAATGTAATAGATTAACCTTGTGTGG

>LQW59936.x1
>lcl|LQW59936.x1 CHROMAT_FILE: LQW59936.x1 PHD_FILE: LQW59936.x1.phd.1 CHEM: term DYE: ET TIME: Wed Mar 21 14:54:37 2001 TEMPLATE: LQW59936 DIRECTION: fwd
TAACTTTTCTATTTTAATTAAACATAGGAGTCACTGAAACGATGGTGTTCACGTCTTCGCCCCAGAACACAGAAATTATG
TTTCGTAACGAGGAGAGATGCCCGTTTCGTGACCCGCTGGGTCCTGTAGCAAAAATACGAGATGAACGGAACGAGTACCA
CGGCTTGACTAATTCTAATGGGGAAGATTGGTGGAGGGTAAGTAAACGAATAAGAGTGAATGAGTAAATGAATAAATAGG
TAGATTATGGTAGCAGCGACGAGCCTAAAACACAAACCTCTGGGTTAGAAGTTATAAACCATTGCTAAACTACTCCCCAA
CCACACCAGGTCCGCCAAATCGTGAATCAACACTTTCTCCAAAACACGGCGGTGTGGAAATACGCGGAAGCGCATAGGAA
TGTGTCCAAAGATTTCTTAAAGTTTATTGACCGAAACATGGACGAAAAGAATGAGGTGATTTGGGTAAAATTAGATTACA
TGCTTGTACTTCGTTAGAAAACTCGTTTTTTTTAACAAAATACGTTACATACACTCACAAAGTTATATATGTTGTAACTG
TTAAGCAAGCACGAAGTGTATGAAACAAAACACCCGTGTTATAACGACTATGGTTGCCCCGCCAAGTGAGGATATTAAAC
TATTTTTTAGTTCAGTTTACAAATTCCCGGCTTTTA

VRQIVNQHFLQNTAVWKYAEAHRNVSKDFLKFIDRNMDEKNEV I-helix region seq 136

>LQW59936.x1_1
*LFYFN*T*ESLKRWCSRLRPRTQKLCFVTRRDARFVTRWVL*QKYEMNGTSTTA*LILM
GKIGGG*VNE*E*MSK*INR*IMVAATSLKHKPLG*KL*TIAKLLPNHTRSAKS*INTFS
KTRRCGNTRKRIGMCPKIS*SLLTETWTKRMR*FG*N*ITCLYFVRKLVFFNKIRYIHSQ
SYICCNC*ASTKCMKQNTRVITTMVAPPSEDIKLFFSSVYKFPAFX
>LQW59936.x1_2
NFSILIKHRSH*NDGVHVFAPEHRNYVS*RGEMPVS*PAGSCSKNTR*TERVPRLD*F*W
GRLVEGK*TNKSE*VNE*IGRLW*QRRA*NTNLWVRSYKPLLNYSPTTPGPPNRESTLSP
KHGGVEIRGSA*ECVQRFLKVY*PKHGRKE*GDLGKIRLHACTSLENSFFLTKYVTYTHK
VIYVVTVKQARSV*NKTPVL*RLWLPRQVRILNYFLVQFTNSRLL
>LQW59936.x1_3
TFLF*LNIGVTETMVFTSSPQNTEIMFRNEERCPFRDPLGPVAKIRDERNEYHGLTNSNG
EDWWRVSKRIRVNE*MNK*VDYGSSDEPKTQTSGLEVINHC*TTPQPHQVRQIVNQHFLQ
NTAVWKYAEAHRNVSKDFLKFIDRNMDEKNEVIWVKLDYMLVLR*KTRFF*QNTLHTLTK
LYML*LLSKHEVYETKHPCYNDYGCPAK*GY*TIF*FSLQIPGF


>sequence 20, 87 2 accessions 53% to 2U1 C-HELIX 44% TO 2F1
QALVMQGQIFSGRPNMPALTQVTDGLGLATIDYTDHWKTQRRFGQTTLR this matches seq 90
FGVGKRSMEDRIVEEVEYLNNAIRSHNGKPFDI matches seq 18

DLQLLQYVRDLFVAGTETTTSTLRWSILCLIHNPEKQEKLRKEIYKVTG (1?)
looks like seq 2 but different joint
QDRVPAMSDKAQMPYTCAFMQEVFRYRTLVPLSLFHATNDDVSLNGYRIPKGTT (0)
VLPNLWAVHNDPDVWDEPSSKFKPERHLDEKGNFVQSKHVIPFSVGPRQCLGEQLARMEIFIFLV
SMVQKFEFLPDPNEPNLPEIENGSCGTVFVPFRFKQIAKMK* 
LQW256489.x1  
LQW272521.x1  
LQW272521.y1 
LQW222687.x1
GCiWno456_p09.g1
GCiWno687_n09.b1
GCiWno425_i01.g1
GCiWno855_l16.b1
GCiWno1021_j12.g1
GCiWno425_i01.g1
GCiWno687_n09.b1
GCiWno677_l07.b1 +

>GCiWno856_c11.g1 CHROMAT_FILE: GCiWno856_c11.g1 PHD_FILE: GCiWno856_c11.g1.phd.1
           CHEM: term DYE: big TIME: Mon Dec 10 10:49:04 2001
           TEMPLATE: GCiWno856_c11 DIRECTION: rev
          Length = 875

 Score =  104 bits (258), Expect = 1e-22
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = -3

Query: 1   QALVMQGQIFSGRPNMPALTQVTDGLGLATIDYTDHWKTQRRFGQTTLR 49
           QALVMQGQIFSGRPNMPALTQVTDGLGLATIDYTDHWKTQRRFGQTTLR
Sbjct: 666 QALVMQGQIFSGRPNMPALTQVTDGLGLATIDYTDHWKTQRRFGQTTLR 520

>GCiWno856_c11.g1
TTCAGCTCGGACCCTTCTTTGTTTATACTACCAAATGGGACAAGAAATGGAATGAAAAGTTGCCCATTTTCACCCCACCC
TCTATAATAGTCTAACTCTATATGTTGGAGGATTCCTATGTCATGTGTTGGAGGATTCCTATGAGGTGGCTTACCAGTAT
GTCGAATGGTTTTCCGTTATGTGAACGAATAGCATTGTTCAAGTATTCGACTTCTTCCACAATGCGATCTTCCATGCTTC
GCTTGCCAACACCAAACCTTATAAGTAAAGCAGGTAATATAGTGGGTGAGGAGAAAGGGCACAGTTTAACTATATTTTTT
TGTCCCATTTGAAAGTAAACACATACTTCTTATGGACCGTCGTTAATTGTCCGGATATTTAGATAATATGTGATAAAGGT
GTCACATCTTCCCCTCCCTGCTATATCACTTTATGTTTAATTTACCCAAATGTAACAATCTAAATCTTTATACGTCAATG
AATTTGACAGTAATGACTGTACATCCGTTTGACTCACCCTCTCAGAGTAGTTTGCCCGAACCGACGTTGAGTTTTCCAAT
GATCAGTATAGTCTATGGTAGCCAAACCAAGTCCATCTGTTACCTGGGTTAATGCCGGCATGTTTGGCCTTCCAGAGAAA
ATTTGACCTTGCATCACTAATGCCTGTTGGAAGTAATTTCATTTGACGCTTATACACCAAGTTTATTTTATATAGTACCG
TGGGGTAAGATGCGACACCTCACACCTGTANGACATAATATCCTAATATACGATCGATTTTTTAAAACATTAACACGGTC
TATCGGAGTCGTGCGACTAAGGTTTACAATTCTTTAATGGTCCTTATTTACCACCAATGGGGCGGGAAATAAATG

>GCiWno856_c11.g1_4
FISRPIGGK*GPLKNCKP*SHDSDRPC*CFKKSIVY*DIMSYRCEVSHLTPRYYIK*TWC
ISVK*NYFQQALVMQGQIFSGRPNMPALTQVTDGLGLATIDYTDHWKTQRRFGQTTLRG*
VKRMYSHYCQIH*RIKI*IVTFG*IKHKVI*QGGEDVTPLSHII*ISGQLTTVHKKYVFT
FKWDKKI*LNCALSPHPLYYLLYL*GLVLASEAWKIALWKKSNT*TMLFVHITENHSTYW
*ATS*ESSNT*HRNPPTYRVRLL*RVG*KWATFHSISCPIW*YKQRRVRAE
>GCiWno856_c11.g1_5
IYFPPHWW*IRTIKEL*TLVARLR*TVLMF*KIDRILGYYVXQV*GVASYPTVLYKINLV
YKRQMKLLPTGISDARSNFLWKAKHAGINPGNRWTWFGYHRLY*SLENSTSVRANYSERV
SQTDVQSLLSNSLTYKDLDCYIWVN*T*SDIAGRGRCDTFITYYLNIRTINDGP*EVCVY
FQMGQKNIVKLCPFSSPTILPALLIRFGVGKRSMEDRIVEEVEYLNNAIRSHNGKPFDIL
VSHLIGILQHMT*ESSNI*S*TIIEGGVKMGNFSFHFLSHLVV*TKKGPS*X
>GCiWno856_c11.g1_6
HLFPAPLVVNKDH*RIVNLSRTTPIDRVNVLKNRSYIRILCXTGVRCRILPHGTI*NKLG
V*ASNEITSNRH**CKVKFSLEGQTCRH*PR*QMDLVWLP*TILIIGKLNVGSGKLL*EG
ESNGCTVITVKFIDV*RFRLLHLGKLNIK*YSREGKM*HLYHILSKYPDN*RRSIRSMCL
LSNGTKKYS*TVPFLLTHYITCFTYKVWCWQAKHGRSHCGRSRILEQCYSFT*RKTIRHT
GKPPHRNPPTHDIGILQHIELDYYRGWGENGQLFIPFLVPFGSINKEGSELX

>GCiWno677_l07.b1 exact match to I-helix region
ATCTACAACTGTTGCAATATGTTCGGGATTTGTTTTTTTGCTGGGACAGAAACGACAACCAGTACACTAAGGTGGTCAAT
CCTGTGTTTGATTCATAATCCGGAGAAGCAAGAAAAACTACGAAAGGAAATCTATAAAGTTATGGGTAAATTTTAAATCA
AGGGGTATGTTGGTGTTCTAAATGATAAAGTTACTTTTAAATAGGCCAGGATAGGGTACCGGCGATGAGTGACAAAGCTC
AGATGCCTTACACTTGCGCGTTCATGCAGGAAGTTTTTAGATACCGCACTCTGGTTCCCTTAAGCTTATTTCATGCAACA
AATGATGATGTAAGCTTGAATGGATACCGTATCCCGAAAGGAACAACAGTAAGAATTGTATATATATGCTGTACTTAATA
TAATGGTAGTAGGATGGGAAAGATGAGACACTTTTTGATTCTTTCGTCCCATTTGGTAGTAAACACAGCGGATCGTTTGA
AGATTTTAATCCATATGCTCACGGCTCCCATAGACCGTTGTTAGTTGTTTAAAACACGATACAGATATTTTGATCTTACG
TTCTAAAGATGTCCCATCTTACCCCACCCAACTAGATATACTATATTCGTATCATGTTACATTAGACCCAACTTAACCTT
GGCCCGAACTTGTGGTTGGATATTTACTTATCCCTCCGTATTTATAAATCATATTATGGGAATCCAAGCGTGTCTTGCCT
TTGGTTCTTCGTAAAGCCTATACGGATAAATTATTTAATAAATATCCCCGGGTTTACCTAACCTTATGGGCGGGCACAAA
CCATCCTGGAGGTGGGGGAACAAACCCAGCAGGTATAACCTTGGCCGCCCTCTTCCATGAAAAGGGAAACTTTTGTCCCA
CCTAAAACCCGGGAACCCTTTTTCGGGGGGGCCACCAACAAGGCTTGGAGGAAACAATATCTCTCAAGGGAAATTTTTAT
TTTTTGGGGTTAAAG

>GCiWno677_l07.b1_1 exact match to I-helix region
IYNCCNMFGICFFAGTETTTSTLRWSILCLIHNPEKQEKLRKEIYKVMGKF*IKGYVGVL
NDKVTFK*ARIGYRR*VTKLRCLTLARSCRKFLDTALWFP*AYFMQQMMM*A*MDTVSRK
EQQ*ELYIYAVLNIMVVGWER*DTF*FFRPIW**TQRIV*RF*SICSRLP*TVVSCLKHD
TDILILRSKDVPSYPTQLDILYSYHVTLDPT*PWPELVVGYLLIPPYL*IILWESKRVLP
LVLRKAYTDKLFNKYPRVYLTLWAGTNHPGGGGTNPAGITLAALFHEKGNFCPT*NPGTL
FRGGHQQGLEETISLKGNFYFLGLK
>GCiWno677_l07.b1_2 exact match to I-helix region
STTVAICSGFVFLLGQKRQPVH*GGQSCV*FIIRRSKKNYERKSIKLWVNFKSRGMLVF*
MIKLLLNRPG*GTGDE*QSSDALHLRVHAGSF*IPHSGSLKLISCNK**CKLEWIPYPER
NNSKNCIYMLYLI*W**DGKDETLFDSFVPFGSKHSGSFEDFNPYAHGSHRPLLVV*NTI
QIF*SYVLKMSHLTPPN*IYYIRIMLH*TQLNLGPNLWLDIYLSLRIYKSYYGNPSVSCL
WFFVKPIRINYLINIPGFT*PYGRAQTILEVGEQTQQV*PWPPSSMKRETFVPPKTREPF
FGGATNKAWRKQYLSREIFIFWG*
>GCiWno677_l07.b1_3 exact match to I-helix region
LQLLQYVRDLFFCWDRNDNQYTKVVNPVFDS*SGEARKTTKGNL*SYG*ILNQGVCWCSK
**SYF*IGQDRVPAMSDKAQMPYTCAFMQEVFRYRTLVPLSLFHATNDDVSLNGYRIPKG
TTVRIVYICCT*YNGSRMGKMRHFLILSSHLVVNTADRLKILIHMLTAPIDRC*LFKTRY
RYFDLTF*RCPILPHPTRYTIFVSCYIRPNLTLARTCGWIFTYPSVFINHIMGIQACLAF
GSS*SLYG*II**I SPGLPNLMGGHKPSWRWGNKPSRYNLGRPLP*KGKLLSHLKPGNPF
SGGPPTRLGGNNISQGKFLFFGVK

>GCiWno944_b18.g1 CHROMAT_FILE: GCiWno944_b18.g1 PHD_FILE: GCiWno944_b18.g1.phd.1
           CHEM: term DYE: big TIME: Tue Dec 25 10:02:56 2001
           TEMPLATE: GCiWno944_b18 DIRECTION: rev
          Length = 909

 Score =  179 bits (449), Expect(2) = 7e-62
 Identities = 90/96 (93%), Positives = 90/96 (93%), Gaps = 3/96 (3%)
 Frame = -2

Query: 1   TTVRIVYICCT-YNGSRMGKMRHFLILSSHLVVNTADRLKILIHMLTAPIDRC-LFKTRY 58
           TTVRIVYICCT YNGSRMGKMRHF ILSSHLVVNTADRLKI IHMLTAPIDRC LFKTRY
Sbjct: 788 TTVRIVYICCT*YNGSRMGKMRHFXILSSHLVVNTADRLKIXIHMLTAPIDRC*LFKTRY 609

Query: 59  RYFDLTF-RCPILPHPTRYTIFVSCYIRPNLTLART 93
           RYFDLTF RCPILPHPTRYTIFVSCYIRPNLT ART
Sbjct: 608 RYFDLTF*RCPILPHPTRYTIFVSCYIRPNLTCART 501


 Score = 79.6 bits (193), Expect(2) = 7e-62
 Identities = 38/64 (59%), Positives = 41/64 (63%), Gaps = 5/64 (7%)
 Frame = -1

Query: 88  LTLARTCGWIFTYPSVFINHIMGIQACLAFXXXXX-----XXXXXXXPNLWAVHNNPDVW 142
           L L + CG IFTYP VFINHIMGI+ACLA                  PNLWAVHN+PDVW
Sbjct: 519 LNLCQNCGCIFTYPPVFINHIMGIKACLALFLVNAYRIN*LINIQVLPNLWAVHNDPDVW 340

Query: 143 DEPS 146
           DEPS
Sbjct: 339 DEPS 328

>GCiWno456_p09.g1
TCCTTTCGGGATACGGTATCCATTCAAGCTTACATCATCATTTGTTGCATGAAATAAGCTTAAGGGAACCAGAGTGCGGT
ATCTAAAAACTTCCTGCATGAACGCGCAAGTGTAAGGCATCTGAGCTTTGTCACTCATCGCCGGTACCCTATCCTGGCCT
ATTTAAAAGGAATTTTATTATTTAGAACACCAACATACCCCTTGATTTAGAAATTTACCCGTAACTTTATAGATTTCTTT
TCGTAGTTTTTCTTGCTTCTCCGGATTATGAATCAAACACAGAATTGACCACCTTAGTGTACTGGTTGTCGTTTCTGTCC
CAGCAACAAACAAATCCCGAACATATTGCAACAGTTGTAGATCCTAAAATAAAATTGAATCACCATGTATTCACCACAGA
AAAAAAATAGAACGCGTATCTCCAATGTTGACAAAGGAGAGGGGCCATACACTCTCTCTCTTTCGCGGGTCGTTTCCGTT
TACCATCGTAGTCAATGGAATCGATGGCGTTTTATGTAGTTTTTCTTCGTGTTTTGACTTAATTTTAAATCATAGGGTAA
AACAACTATTTTCTAATATATATATATATTTTTTTAACAACCCGTATTTTGAAGGTTTTTAATTAAATTTATTTAATATT
TAAATTTCCTAAACAATTAAGTGGTAAAGTGTAAGCGTTAACCTACCAAATAACTAAACTGGCCTAATAAACTTGAACAG
TTGGGTGTAGTTNNTTAAAATAAACAGCTAAAACCTCTTAAAACTACCATGCGCCTATCTTTTACAATGGAGACCAAGCG
AAATGGGAAACGGAGTGGCGGTCACGTGAATAGAANAAAGATATATCACGTTTTTTGGCAGTTGCGCGTNCTACTCTNTT
TTATTTCTGGGGTNATCACTCATAAAAGGGTAAATGAATCGACAGAGAAT

>GCiWno944_b18.g1
TTCGAGCTCGGTACCATTAGACCAATTAACACTTATAAANCATTTTTTGGTTAAATTATTAAATTACTTCATCTTTGCAA
TTTGCTTAAACCGGAAAGGAACAAACACAGTACCACACGACCCATTTTCAATTTCTGGAAGGTTCGGTTCGTTCGGATCC
GGAAGAAACTCAAATTTCTGAACCATTGAAACCAGGAAGATGAAGATTTCCATTCGAGCTAGTTGTTCTCCCAAGCACTG
ACGTGGACCCACCGAGAAAGGTATCACGTGTTTAGACTGAACAAAGTTTCCCTTCTCATCGAGATGACGCTCAGGTTTAA
ACTTGCTTGATGGTTCGTCCCACACATCAGGATCGTTGTGTACTGCCCATAGGTTAGGTAATACCTGTATATTTATTAAT
TAATTTATCCTATAAGCATTAACGAGAAACAAAGCAAGACACGCTTTGATTCCCATAATATGATTTATAAATACGGGAGG
ATAAGTAAATATACAACCACAGTTCTGGCACAAGTTAAGTTGGGTCTAATGTAACATGATACGAATATAGTATATCTAGT
TGGGTGGGGTAAGATGGGACATCTTTAGAACGTAAGATCAAAATATCTGTATCGTGTTTTAAACAACTAACAACGGTCTA
TGGGAGCCGTGAGCATATGGATTANAATCTTCAAACGATCCGCTGTGTTTACTACCAAATGGGACGANAGAATCNAAAAG
TGTCTCATCTTTCCCATCCTACTACCATTATATTAAGTACAGCATATATATACAATTCTTACTGTTGTTCCTTTCGGGAT
ACGGTATCCATTTCAGCTTACATCATCATTTGNTGCATGAAATAAGCTTAAGGGAACCCAGAGTGCGGTATCTAANAACT
TCCTGCATGAACGCGGCAGTGTAAGGCAN

>GCiWno944_b18.g1_4
XPYTAAFMQEVXRYRTLGSLKLISCXK**CKLKWIPYPERNNSKNCIYMLYLI*W**DGK
DETLXDSXVPFGSKHSGSFEDXNPYAHGSHRPLLVV*NTIQIF*SYVLKMSHLTPPN*IY
YIRIMLH*TQLNLCQNCGCIFTYPPVFINHIMGIKACLALFLVNAYRIN*LINIQVLPNL
WAVHNDPDVWDEPSSKFKPERHLDEKGNFVQSKHVIPFSVGPRQCLGEQLARMEIFIFLV
SMVQKFEFLPDPNEPNLPEIENGSCGTVFVPFRFKQIAKMK*FNNLTKKXFISVNWSNGT
ELE
>GCiWno944_b18.g1_5
ALHCRVHAGSX*IPHSGFP*AYFMXQMMM*AEMDTVSRKEQQ*ELYIYAVLNIMVVGWER
*DTFXFXRPIW**TQRIV*RX*SICSRLP*TVVSCLKHDTDILILRSKDVPSYPTQLDIL
YSYHVTLDPT*LVPELWLYIYLSSRIYKSYYGNQSVSCFVSR*CL*DKLINKYTGIT*PM
GSTQRS*CVGRTIKQV*T*ASSR*EGKLCSV*TRDTFLGGSTSVLGRTTSSNGNLHLPGF
NGSEI*VSSGSERTEPSRN*KWVVWYCVCSFPV*ANCKDEVI**FNQKMXYKC*LV*WYR
ARX
>GCiWno944_b18.g1_6
CLTLPRSCRKXLDTALWVPLSLFHAXNDDVS*NGYRIPKGTTVRIVYICCT*YNGSRMGK
MRHFXILSSHLVVNTADRLKIXIHMLTAPIDRC*LFKTRYRYFDLTF*RCPILPHPTRYT
IFVSCYIRPNLTCARTVVVYLLILPYL*IILWESKRVLLCFSLMLIG*IN**IYRYYLTY
GQYTTILMCGTNHQASLNLSVISMRRETLFSLNT*YLSRWVHVSAWENN*LEWKSSSSWF
QWFRNLSFFRIRTNRTFQKLKMGRVVLCLFLSGLSKLQR*SNLII*PKNXL*VLIGLMVP
SSX

>GCiWno456_p09.g1_4
ILCRFIYPFMSDXPRNKXE*XAQLPKNVIYLXSIHVTATPFPISLGLHCKR*AHGSFKRF
*LFILXNYTQLFKFIRPV*LFGRLTLTLYHLIV*EI*ILNKFN*KPSKYGLLKKYIYILE
NSCFTL*FKIKSKHEEKLHKTPSIPLTTMVNGNDPRKRESVWPLSFVNIGDTRSIFFLW*
IHGDSILF*DLQLLQYVRDLFVAGTETTTSTLRWSILCLIHNPEKQEKLRKEIYKVTGKF
LNQGVCWCSK**NSF*IG QDRVPAMSDKAQMPYTCAFMQEVFRYRTLVPLSLFHATNDDV
SLNGYRIPKG
>GCiWno456_p09.g1_5
SLSIHLPFYE*XPQK*XRVXRATAKKRDISXFYSRDRHSVSHFAWSPL*KIGAW*F*EVL
AVYFXXLHPTVQVY*ASLVIW*VNAYTLPLNCLGNLNIK*I*LKTFKIRVVKKIYIYIRK
*LFYPMI*N*VKTRRKTT*NAIDSIDYDGKRKRPAKERECMAPLLCQHWRYAFYFFSVVN
TW*FNFILGSTTVAICSGFVCCWDRNDNQYTKVVNSVFDS*SGEARKTTKRNL*SYG*IS
KSRGMLVF*IIKFLLNRPG*GTGDE*QSSDALHLRVHAGSF*IPHSGSLKLISCNK**CK
LEWIPYPERX
>GCiWno456_p09.g1_6
FSVDSFTLL*VXTPEIKXSXTRNCQKT*YIFXLFT*PPLRFPFRLVSIVKDRRMVVLRGF
SCLF*XTTPNCSSLLGQFSYLVG*RLHFTT*LFRKFKY*INLIKNLQNTGC*KNIYIY*K
IVVLPYDLKLSQNTKKNYIKRHRFH*LRW*TETTRERERVYGPSPLSTLEIRVLFFFCGE
YMVIQFYFRIYNCCNMFGICLLLGQKRQPVH*GGQFCV*FIIRRSKKNYEKKSIKLRVNF
*IKGYVGVLNNKIPFK*ARIGYRR*VTKLRCLTLARSCRKFLDTALWFP*AYFMQQMMM*
A*MDTVSRKX

>SEQUENCE 90 C-HELIX 53% TO 2C9
TDGLGLATIDYTDHWKTQRRFGQTTLR
LQW171763.x1 


>sequence 21 2 accessions 49% to 2R1
HQNIIGFFSDMFLAGTKTIT
SQLRWGFLIMVKHQDCQNKVRREIDDVIGTVKLKHRKLKHRSIMPYTCAVVHELFRF
RTVVPLSLPRMNVADVTVGGYRIPKGTN (0?)
VIMNIWALHNDDCRWREPERFIPERHLNADGKFMKPKNVLPFGVGARSCIAEHLARNKIFLFLVSTLKNF
TLSVPNGDSPSLDAGSNGTIFIPSDYNIVAQYRD*
LQW66232.y2 
LQW66232.y1 
DEV42165.y1 EXXR
LQW60791.y1 
LQW80804.x1
GCiWno963_a08.g1

>GCiWno963_a08.g1
AAACTCATGTTCCATTATTCCTAAAAGCTGTATCAATAAAAAGAGTATTTTGTTTTCTTTTTATAAGGCTATATAAACAG
ATAAACAATATTTATTATATCTACAAATAGTTTTAAGTATATTTATACAATTTGTATTTATTGTTTCCCCTTTTCTATTA
ATTCCCTATTAATCCCTATACTGCGCTACTATGTTGTAATCACTTGGTATAAATATTGTACCGTTAGAACCCGCGTCCAA
ACTGGGCGAGTCCCCGTTTGGAACAGAAAGAGTGAAATTCTTTAAAGTAGAAACAAGAAAAAGAAAAATCTTATTTCTTG
CCAAATGCTCTGCGATACACGAGCGCGCCCCAACACCAAAGGGTAAAACATTTTTGGGTTTCATAAATTTTCCATCCGCG
TTCAAATGTCTTTCAGGGATAAAACGCTCTGGCTCCCTCCACCGGCAGTCGTCATTATGCAAAGCCCAAATATTCATTAT
GACCTGTGTAACGTGGTAACTGTTAAAAGCCCGCCTCGTGAGGACGAATGAGACATTTATATTTATAACCACTGCTTCAT
ATAGTAAGGCGGAGAAAGATGGAACACCTTTTCATTACATTTTTTCGTTCTACTTTGTAGTAATTAAACAAAGAACATTC
AAAGAAATATAAAACCCTATCCTGACGACTCAGATAGACCGTTGTTAATCGTTTANAACACAATCAGGATATCTGGACAT
TGTGTACTANNAGTANTCCATGAACCACAGCGCANGTGTATGGCATTATTTGAACGGNGTTNTTACTTTACTGTACCATG
GCGACCTGTAAGAAAGGGCAC


>GCiWno46_h08.g1 CHROMAT_FILE: GCiWno46_h08.g1 PHD_FILE: GCiWno46_h08.g1.phd.1 CHEM:
           term DYE: big TIME: Sat Sep  1 11:38:31 2001 TEMPLATE:
           GCiWno46_h08 DIRECTION: rev
          Length = 885

 Score =  101 bits (250), Expect = 1e-21
 Identities = 47/49 (95%), Positives = 49/49 (99%)
 Frame = -1

Query: 1   QNIIGFFSDMFLAGTKTITSQLRWGFLIMVKHQDCQNKVRREIDDVIGK 49
           QNIIGFFSDMFLAGT+TITSQLRWGFLIM+KHQDCQNKVRREIDDVIGK
Sbjct: 486 QNIIGFFSDMFLAGTETITSQLRWGFLIMMKHQDCQNKVRREIDDVIGK 340

>GCiWno46_h08.g1
ATCATCCGTGGTAGACTAGAGGTCAACGGTTCTGAATCGAAATAGTTCATGAACCACAGCGCAGGTGTATGGCATTATTG
AACGGTGTTTTAACTTTACTGTACCATGGCGACATGTAAGAAAGGGCAACAAAATATGGGGCGTTCGTGGGACAAAGGGT
ATAAACTTCAGGTTTCTGTATAAAATGGATGAAGTTCTTCGGCGAGGCAGTCATAAAAGGAGACTTATATAGTTTAGGGC
TTTAGGCTAATTTGGGCACATAATCTCTCAGTTTGTTCAATACCGTTGGTAAAATGTTAAAAATTATCGTAATTTAATTA
AACACAAATAGCATTGTTACTTACCAATGACGTCATCAATCTCTCGTCTAACTTTGTTCTGACAATCTTGGTGTTTCATC
ATAATTAGAAACCCCCATCGTAATTGTGACGTAATAGTTTCGGTTCCAGCCAAGAACATATCCGAGAAAAATCCAATGAT
ATTCTGGTGGGGGTTAAATAGCGTTAATTCAACTAAATTATGCATATTTAGTGTGTCTTTTATAGCACATAGAGAATAAA
TGGTTTCAAGGCTCGATGCTGCTATACCATTCAGGGTATGTGTCCTTGGGCAAGACATTTAACAGCAATTGCTCCAACCC
AATGGTCATGCCCCGTTTGGTAGTAAATAAAGAATATTCAAATAATTGTTTAACTATATACCCTCATGACTCCTATAAAT
TCAACCATATCCTTATGACTCCCATAGACAGTTGTTAATTGTTTAAAACACGATCANGCTATTTGAATATTATTGTTAAA
AAGGGTTGTTCCATCTTNCCCCCACCTACTATATGTTATTATTTCAGTATCCTAATTGGGGGGGAGATGGNACACATTTT
AACTN

>GCiWno46_h08.g1_4
XLKCVPSPPQLGY*NNNI**VGXRWNNPF*Q*YSNSXIVF*TINNCLWES*GYG*IYRSH
EGI*LNNYLNILYLLPNGA*PLGWSNCC*MSCPRTHTLNGIAASSLETIYSLCAIKDTLN
MHNLVELTLFNPHQNIIGFFSDMFLAGTETITSQLRWGFLIMMKHQDCQNKVRREIDDVI
GK*QCYLCLIKLR*FLTFYQRY*TN*EIMCPN*PKALNYISLLL*LPRRRTSSILYRNLK
FIPFVPRTPHILLPFLTCRHGTVKLKHRSIMPYTCAVVHELFRFRTVDL*STTDD = seq 21
>GCiWno46_h08.g1_5
VKMCXISPPIRILK**HIVGGGKMEQPFLTIIFK*XDRVLNN*QLSMGVIRIWLNL*ES*
GYIVKQLFEYSLFTTKRGMTIGLEQLLLNVLPKDTYPEWYSSIEP*NHLFSMCYKRHTKY
A*FS*INAI*PPPEYHWIFLGYVLGWNRNYYVTITMGVSNYDETPRLSEQS*TRD**RHW
*VTMLFVFN*ITIIFNILPTVLNKLRDYVPKLA*SPKLYKSPFMTASPKNFIHFIQKPEV
YTLCPTNAPYFVALSYMSPWYSKVKTPFNNAIHLRCGS*TISIQNR*PLVYHG*X
>GCiWno46_h08.g1_6
S*NVXHLPPN*DTEIITYSRWGXDGTTLFNNNIQIA*SCFKQLTTVYGSHKDMVEFIGVM
RVYS*TII*IFFIYYQTGHDHWVGAIAVKCLAQGHIP*MV*QHRALKPFILYVL*KTH*I
CII*LN*RYLTPTRISLDFSRICSWLEPKLLRHNYDGGF*L**NTKIVRTKLDERLMTSL
VSNNAICV*LNYDNF*HFTNGIEQTERLCAQISLKP*TI*VSFYDCLAEELHPFYTET*S
LYPLSHERPIFCCPFLHVAMVQ*S*NTVQ*CHTPALWFMNYFDSEPLTSSLPRMX


>sequence 23, 76 3 accessions 53% to 2R1 a real seq different from 18
DLQLIQYVRDLYVAGTETTT 
GTLRWAVLCLVHHPEKQNKLRKEIFDVIGREKTPSMKDKAQM
PYTCAFMQELFRFRTLAPLGVPHKISNDVQVQGWSIPKGTWLVCNLWAVHNDPDVWDEP
SKFKPERHLDEKGNFVQSKYVMPFSVGPRHCLGEQLARMEIFIFLVSMVQKFEF
LPDPNEPQLSEVQQGVSGFMCVPHPFKQIAKEV

LQW269817.x1  
DEV29825.x1   
LQW193874.y1  
cinc027f08
GCiWno590_k18.b1 = RTLAPLGVPHKISNDVQVQGWSIPKGTW not 18
GCiWno697_m22.g1 = RTLAPLGVPHKISNDVQVQGWSIPKGTW not 18
four sequences match 18 and do not match this seq

GCiWno56_k09.g1  = VQSKYVMPFSVGPRHCLG and EFLPDPNEPQLSEVQQGVSGFMCVPHPFKQIAKEV
cinc027f08       = VQSKYVMPFSVGPRHCLG and EFLPDPNEPQLSEVQQGVSGFMCVPHPFKQIAKEV
rcinc027f08      = VQSKYVMPFSVGPRHCLG and EFLPDPNEPQLSEVQQGVSGFMCVPHPFKQIAKEV

4 seqs support the end of 18 so 18 and 23 are different seqs

>cinc027f08 
          Length = 735

 Score =  152 bits (379), Expect = 1e-36
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   NLWAVHNDPDVWDEPSKFKPERHLDEKGNFVQSKYVMPFSVGPRHCLGEQLARMEIFIFL 60
           NLWAVHNDPDVWDEPSKFKPERHLDEKGNFVQSKYVMPFSVGPRHCLGEQLARMEIFIFL
Sbjct: 136 NLWAVHNDPDVWDEPSKFKPERHLDEKGNFVQSKYVMPFSVGPRHCLGEQLARMEIFIFL 315

Query: 61  VSMVQKFEF 69
           VSMVQKFEF
Sbjct: 316 VSMVQKFEF 342

>cinc027f08
GGGCCTTACACATGCGCATTCATGCAAGAATTGTTTCGTTTCCGCACGCTTGCACCTCTGGGTGTACCGCACAAGATCAG
CAATGATGTTCAAGTAGAAGGGTGGTCCATTCCAAAGGGAACATGGCTTGTGTGTAACTTATGGGCGGTACACAACGATC
CTGATGTGTGGGACGAACCAAGCAAGTTTAAACCTGAGCGTCACCTCGATGAGAAGGGAAACTTTGTTCAGTCTAAATAC
GTGATGCCTTTCTCGGTGGGTCCACGTCATTGCTTGGGAGAACAACTAGCTCGAATGGAAATCTTCATCTTCCTAGTTTC
AATGGTTCAGAAGTTTGAGTTTCTTCCGGATCCGAATGAACCACAGTTGTCCGAGGTTCAACAGGGCGTCTCAGGATTCA
TGTGTGTACCCCATCCCTTTAAACAAATTGCCAAGGAAGTTTGAATTAACTAACAATCCACGTATAAATTACTATAACAT
ATACATATGCTACAGTGTATATCATAGCAAGCAAACGAACAAATATAAGTGCGCTAAGTTATTGAGCTCGCATATCGGGG
CCATATAAATTCTTTTTTTGCCCACAGTTGTTCTTTTTCTTTGCCATGATCGTTTTAATACTTAAATTCTTTACTCTCGC
ATCTAGTTATTATAATCTGTTGACTGTATTTCAACCATAATGCCGCATATTTTATATAAGCATATAATTACGACCACTTT
CATTTTTGATCGAAG

GPYTCAFMQELFRFRTLAPLGVPHKISNDVQVEGWSIPKGTWLVCNLWAVHNDPDVWDEP
SKFKPERHLDEKGNFVQSKYVMPFSVGPRHCLGEQLARMEIFIFLVSMVQKFEFLPDPNE
PQLSEVQQGVSGFMCVPHPFKQIAKEV*

>GCiWno56_k09.g1 CHROMAT_FILE: GCiWno56_k09.g1 PHD_FILE: GCiWno56_k09.g1.phd.1 CHEM:
           term DYE: big TIME: Sat Sep  1 13:07:24 2001 TEMPLATE:
           GCiWno56_k09 DIRECTION: rev
          Length = 889

 Score =  148 bits (369), Expect = 1e-35
 Identities = 68/69 (98%), Positives = 68/69 (98%)
 Frame = -2

Query: 1   NLWAVHNDPDVWDEPSKFKPERHLDEKGNFVQSKYVMPFSVGPRHCLGEQLARMEIFIFL 60
           NLWAVHNDPDVWDEPSKFK ERHLDEKGNFVQSKYVMPFSVGPRHCLGEQLARMEIFIFL
Sbjct: 645 NLWAVHNDPDVWDEPSKFKLERHLDEKGNFVQSKYVMPFSVGPRHCLGEQLARMEIFIFL 466

Query: 61  VSMVQKFEF 69
           VSMVQKFEF
Sbjct: 465 VSMVQKFEF 439

SEQUENCE 76, 23  91% TO LQW145909.y1 VERY LIKE SEQ 18 52% TO 2C9
274 LIQYVRDLYVAGTETTTGTLRWAVLCLVHHPEKQNKLRKEIFDVI (1?)
REKTPSMKDKAQMPYTCAFMQELFRFRTLAPLGVPHKISNDVQVQGWSIPKGTW (0)
LVCNLWAVHNDPDVWDEPSKFKPERHLDEKGNFVQSKYV
MPFSVGPRHCLGEQLARMEIFIFLVSMVQKFEFLPDPNEPQLSEVQQGVSGFMCVPHPFKQIAKEV*
LQW210348.x2
LQW210348.x3 I-HELIX
LQW20757.y1 I-HELIX
GCiWno590_k18.b1

>GCiWno590_k18.b1
ACGTATTTAGACTGAACAAAGTTTCCCTTCTCATCGAGGTGGCGCTCAGGTTTAAACTTGCTTGGTTCGTCCCACACATC
AGGATCGTTGTGCACCGCCCATAAGTTACACACAAGCTGGAATAGACAAATAGTTGATTATATAAAATGATTTTTTTTAT
TAAAGCATATCTTCTTACCCACGTTCCCTTTGGAATGGACCACCCTTGTACTTGAACATCATTGCTGATCTTGTGCGGTA
CACCGAGAGGTGCAAGCGTGCGGAAACGAAACAATTCTTGCATGAATGCGCATGTGTAAGGCATTTGAGCTTTGTCCTTC
ATGCTAGGTGTCTTTTCTCGGCCTAAAATAAATAAAATCTTTCTTTAGCTTACATTGTATTGAAGAATGACTACAAGTCT
ATAGTGTAATTAAGCTGTGTTAACATACCGATTACATCAAAGATTTCCTTTCGTAGTTTGTTTTGTTTCTCCGGGTGATG
AACTAAGCATAGCACAGCCCAACGCAACGTTCCTGTTGTTGTTTCAGTTCCAGCAACGTACAAGTCGCGTACGTATTGGA
TCAACTGCAGATCCTACAACATGCAGTATATACGTGTAACATAATCTGTCGTGTACATATAGTCTTCCATATATACATAG
TAGACTGGAGAAATCATATAGTGGGCTCTTTTAGATTGCGAANATGTGGTTAATTAATTATGCANATATTTTTTCTTTAC
TACCAATTAGAAATAGGTCAACAAAACATGACGAANACATGTCATGTCACACCCCACCCATATTACTCCACCCTACTACA
CAATGTTATGGGCTGAAATTAAAAGCACAGCGTNACCACCTTTACCGTAAAGGAACATCAGTTTCTTTTTTTTGTTCTCC
ATAAAAGCATCGATAAGTCTCTAAGG

>GCiWno590_k18.b1_4
P*RLIDAFMENKKKKLMFLYGKGGXAVLLISAHNIV**GGVIWVGCDMTCXRHVLLTYF*
LVVKKKYXHN*LTTXSQSKRAHYMISPVYYVYMEDYMYTTDYVTRIYCML*DLQLIQYVR
DLYVAGTETTTGTLRWAVLCLVHHPEKQNKLRKEIFDVIGMLTQLNYTIDL*SFFNTM*A
KERFYLF*AEKRHLA*RTKLKCLTHAHSCKNCFVSARLHLSVYRTRSAMMFKYKGGPFQR
ERG*EDML**KKSFYIINYLSIPACV*LMGGAQRS*CVGRTKQV*T*APPR*EGKLCSV*
IR
>GCiWno590_k18.b1_5
LETYRCFYGEQKKETDVPLR*RWXRCAFNFSP*HCVVGWSNMGGV*HDMXSSCFVDLFLI
GSKEKIXA*LINHXFAI*KSPLYDFSSLLCIYGRLYVHDRLCYTYILHVVGSAVDPIRTR
LVRCWN*NNNRNVALGCAMLSSSPGETKQTTKGNL*CNRYVNTA*LHYRLVVILQYNVS*
RKILFILGREKTPSMKDKAQMPYTCAFMQELFRFRTLAPLGVPHKISNDVQVQGWSIPKG
TWVRRYALIKKIILYNQLFVYSSLCVTYGRCTTILMCGTNQASLNLSATSMRRETLFSLN
TX
>GCiWno590_k18.b1_6
LRDLSMLLWRTKKRN*CSFTVKVVTLCF*FQPITLCSRVE*YGWGVT*HVFVMFC*PISN
W**RKNXCIIN*PHXRNLKEPTI*FLQSTMYIWKTICTRQIMLHVYTACCRICS*SNTYA
TCTLLELKQQQERCVGLCYA*FITRRNKTNYERKSLM*SVC*HSLITL*TCSHSSIQCKL
KKDFIYFRPRKDT*HEGQSSNALHMRIHARIVSFPHACTSRCTAQDQQ*CSSTRVVHSKG
NVGKKICFNKKNHFI*STICLFQLVCNLWAVHNDPDVWDEPSKFKPERHLDEKGNFVQSK
YV

SEQUENCE 25, 35, 93, 89 RYG TO MID 332% TO 1A1 39% to seq 49, 67
37% to 1B1 fugu 35% to 1B1 human 37% to 1A1 human
MDSLVFVLVDTVLVMKYQILLLLVIVYAIKLLAASQSRRLNIPGPYPWPVIGNVIEMGGQPQFSLTNMAK (?)
RYGPVYLMKLGTADVLVLNNYEVIKEALLRQRRIFGGRPIFDSFKKISQGLGVVFNSTMT
QGDEWMKLKMTIVKHVHRFVSSEETKGYVAHHVQMEAVELVRILTEKCRS
SPNEVIFPIEQINLAIANVVCAIMFGHRYQHGNK (0)
EFQDLISLNEQFGDVIGSGSQVDVIPWMK (0)
IFPKFRNALKVFDFLTNRLNNWMRLR (2)
TKEHRLTYKHGVIRDIVDSFIAESIDHPEQSALNDDVIMALTTDVFGA
GQDTMSTTMQWVFVYMMHFKECQRK
IHAELDSVIGPGELPHISDRRRLPYLEAVMHEIFRHSTFTSTTIPHVTTQDTVLDGHFIP 
KGILVFINQFGANHDPNHWVDPDKFIPERFLDGKGNLISRPHDRYLLFSTGARKCPG 
DELSRMLILHFMATMFALCEVSSDPQKPATL
DAVYNLSMRPKELRTIVRSNKLAVPETIQSLTCPE
DEV48420.y1  
DEV9534.x1   
DEV9534.y1 MID REGION 220-247 57% TO 1B1
LQW103187.y1 
DEV58814.y1  
DEV58814.x2
DEV58814.x1
LQW187619.y1 
DEV8890.x1   
GCiWno954_j01.g1
GCiWno491_d01.g1
GCiWno510_e17.g1
GCiWno955_i14.g1
DEV37717.y1  
DEV37717.y2  
DEV31193.y1  
LQW250443.x1 
GCiWno164_d18.b1

>scf/ciona01/G126/seq_dir/hrs/G126P64121R.T0/G126P64121RE4.T0.seq    742 file 2
            742  ABI
            Length = 742

  Minus Strand HSPs:
76% match to seq 89 next best 35% to seq 49 so this is the ortholog of seq 89
 Score = 147 (51.7 bits), Expect = 4.7e-10, P = 4.7e-10
 Identities = 26/34 (76%), Positives = 30/34 (88%), Frame = -1

Query:     1 SPNEVIFPIEQINLAIANVVCAIMFGHRYQHGNK 34
             S N+ I P+E INLA+ANVVC+IMFGHRYQHGNK
Sbjct:   505 STNQAIEPVENINLAVANVVCSIMFGHRYQHGNK 404

>scf/ciona01/G126/seq_dir/hrs/G126P66860F.T0/G126P66860FG1.T0.seq    file 2
            729  ABI
            Length = 729

  Minus Strand HSPs:
79% to seq 25 (subtract off intron region) = ortholog of seq 25
 Score = 139 (48.9 bits), Expect = 3.8e-09, P = 3.8e-09
 Identities = 24/33 (72%), Positives = 30/33 (90%), Frame = -1

Query:    31 HGNKEFQDLISLNEQFGDVIGSGSQVDVIPWMK 63
             H  +EFQDLISLNEQFG V+G+GSQ+DV+PW+K
Sbjct:   576 HVTQEFQDLISLNEQFGQVVGAGSQIDVMPWIK 478

STNQAIEPVENINLAVANVVCSIMFGHRYQHGNK
EFQDLISLNEQFGQVVGAGSQIDVMPWIK

>scf/ciona01/G126/seq_dir/hrs/G126P64874R.T0/G126P64874RE5.T0.seq    995      0
            995  ABI
            Length = 995

  Plus Strand HSPs:

 Score = 167 (58.8 bits), Expect = 5.8e-12, P = 5.8e-12
 Identities = 32/33 (96%), Positives = 32/33 (96%), Frame = +3

Query:     1 STNQAIEPVENINLAVANVVCSIMFGHRYQHGN 33
             STNQAIEPVENINLAVANVVCSIM GHRYQHGN
Sbjct:   696 STNQAIEPVENINLAVANVVCSIMXGHRYQHGN 794

>scf/ciona01/G126/seq_dir/hrs/G126P64874R.T0/G126P64874RE5.T0.seq_1 995 0    995  ABI
SEPELMWWTVNFFGLILFILQSMLV**FLAINIEMDILTAAITTICSFKIEITIVLTIVY
AVKWFMALHKDRPKIPGPYPWPVIGNVVEMGSQPQISLTNMAKK*VQVTR*RPLQELITD
FAGTVLFILSSSGPLTC*SSIIMT**KKH*YVNEGCSPAARYLSRSRRSRKVAALCSTAA
*RKGRRGNV*R*RS*SIFIDSSRPHKPRASWLVTCKKKPFNWCTFYPKNAEALRTKRLSP
LKISILQSQTLYARSCXDIDTNMGIXVXXDFKYIDIRSACTPAYVVVECAA*QMLHCIPS
YTIPSHYTDVTDAMLINPRSEVSI*PRRVACX
>scf/ciona01/G126/seq_dir/hrs/G126P64874R.T0/G126P64874RE5.T0.seq_2 995 0    995  ABI
LNLSSCGGL*ISSV*FSLFYRAC*YNNF*RSTSKWISSQPP*LRYALSK*KSLLSLRSCT
P*SGLWRYIKTDQRSRVHIHGQ*SGMWWRWDRNRRFHSPTWQRSKCR*RVNDHCRN*SLI
SQVRSYLSYQARDR*RADPQ*L*RNKRSINTSTRGVLRPPGI*VVQEDLARSRHCVQQQL
DARGGVATYEDDDREASSSIHRVPTNQGLRGWSRAKRNRSTGAHFIRKMPKLYEPSD*AR
*KYQSCSRKRCMLDHVRTSIPTWE*X*XXILNILIYVLLVRPRMW*SSVLHSKCCIVFLP
IRFPVIIPMSLMPC*SILDRKFQFDPGELHVX
>scf/ciona01/G126/seq_dir/hrs/G126P64874R.T0/G126P64874RE5.T0.seq_3 995 0    995  ABI
*T*AHVVDCEFLRSNSLYFTEHASIIISSDQHRNGYPHSRHNYDMLFQNRNHYCPYDRVR
REVVYGVT*RPTKDPGSISMASDRECGGDGIATADFTHQHGKEVSAGDALTTTAGINH*F
RRYGPIYLIKLGTADVLILNNYDVIKEALIRQRGVFSGRPVFESFKKISQGRGIVFNSSL
TQGAAWQRMKMTIVKHLHRFIASPQTKGFVAGHVQKETVQLVHILSEKCRSSTNQAIEPV
ENINLAVANVVCSIMXGHRYQHGNXGNX*F*IY*YTFCLYARVCGSRVCCIANVALYSFL
YDSQSLYRCH*CHVDQSSIGSFNLTQASCML

>scf/ciona01/G126/seq_dir/hrs/G126P69591F.T0/G126P69591FE11.T0.seq    732
            0    732  ABI
            Length = 732

  Plus Strand HSPs:

 Score = 175 (61.6 bits), Expect = 3.7e-13, P = 3.7e-13
 Identities = 33/33 (100%), Positives = 33/33 (100%), Frame = +1

Query:     2 TNQAIEPVENINLAVANVVCSIMFGHRYQHGNK 34
             TNQAIEPVENINLAVANVVCSIMFGHRYQHGNK
Sbjct:   109 TNQAIEPVENINLAVANVVCSIMFGHRYQHGNK 207

>scf/ciona01/G126/seq_dir/hrs/G126P69591F.T0/G126P69591FE11.T0.seq_1 732 file 9
ANWVYDXRSGVEKLPPGTCKRNRSTGAHFIRKMPKLTNQAIEPVENINLAVANVVCSIMF
GHRYQHGNKVILIFKYIDIRSACYAGVCGSRVCCIANVALYSFLYDSQS*YRCH*CNVDQ
SRIGGFNLTQAEFACRVSVFLCSLPT*SLAV*K*PSQFTHCAIIRGGYMPGASI*STLQS
LFVCSGYC*VIETSRSAEKNQISIFVEFSLKSRFDSLHANFXELFQFAL*VDRRSPFADK
LRRI
>scf/ciona01/G126/seq_dir/hrs/G126P69591F.T0/G126P69591FE11.T0.seq_2 732 0    732  ABI
QTGXTXIVRGWKNSRLVRAKETVQLVHILSEKCRSLRTKRLSPLKISILQSQTLYARSCS
DIDTNMGIR*F*FLNILIYVLLVTPAYVVVECAA*QMLHCIPSYTIPSHNTDVTDAMLIN
LESEVSI*PKPSSHVACLFSYARYQPNPSRYENDPHNSRTARLYAVDICRGLRSNRRCSL
CLFVRDIVRSLRHRGRRRKIKFLFLSNSRSNRVLTVCTQTXSSCFNLRCELIAEVRLPTN
FAG
>scf/ciona01/G126/seq_dir/hrs/G126P69591F.T0/G126P69591FE11.T0.seq_3 732 0    732  ABI
KLGXRXSFGGGKTPAWYVQKKPFNWCTFYPKNAEAYEPSD*AR*KYQSCSRKRCMLDHVR
TSIPTWE*GNFDF*IY*YTFCLLRRRMW*SSVLHSKCCIVFLLIRFPVIIPMSLMQC*SI
SNRRFQFDPSRVRMSRVCFPMLATNLIPRGMKMTLTIHALRDYTRWIYAGGFDLIDAAVF
VCLFGILLGH*DIEVGGEKSNFYFCRILAQIAF*QFARKLXRAVSICAVS*SQKSVCRQT
SQD

>scf/ciona01/G126/seq_dir/hrs/G126P603918R.T0/G126P603918RC9.T0.seq  file 15
            0    734  ABI
            Length = 734

  Minus Strand HSPs:

 Score = 159 (56.0 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 32/50 (64%), Positives = 36/50 (72%), Frame = -3

Query:    14 LAVANVVCSIMFGHRYQHGNKEFQDLISLNEQFGQVVGAGSQIDVMPWIK 63
             L    ++ S +      H  +EFQDLISLNEQFGQVVGAGSQIDVMPWIK
Sbjct:   216 LGAGRIISSQLLYSNKCHVTQEFQDLISLNEQFGQVVGAGSQIDVMPWIK 67

>scf/ciona01/G126/seq_dir/hrs/G126P603918R.T0/G126P603918RC9.T0.seq_4 734 0    734  ABI
ARLGPLAYLLFTYQLVGNTPPQVPKXYTLLVDYTPRXECPTRSVLQVIRNFPCSFAEPFF
SNR*FRSLYLSRIAINHVIKTNLQISYEVNIDSID*RFAHFIDKLCIRFVIIFRLEANRN
IIY*DVIISGP*NDELVSSVRGENNRFKLSVRRRTIGADVTSVKLASHAIGELGAGRIIS
SQLLYSNKCHVTQEFQDLISLNEQFGQVVGAGSQIDVMPWIKVRMTSQTGVSE*XTTWSF
SVQV
>scf/ciona01/G126/seq_dir/hrs/G126P603918R.T0/G126P603918RC9.T0.seq_5 734 0    734  ABI
GTAWTAGVSLVYVSACGEYPSPSTKXIHAVSGLYTAXRMSNAIGSASHSEFSL*FRRTIL
FKPLISIIILIAYRYKPRDQNKSSNQL*GQY*QH*LTLCTFH**VVYSFRHNFSIRSESQ
HNLLRCHNIRAVK*RTRFVGSRRK*SLQIISSAADDRG*RHIR*AGFARYR*TRRRSYYF
VTITLL**VSRHTGVPGPDQFERTIRSSGWCR*PNRRYAVDQGAYDVTNRC**MXHNMEF
QCPSX
>scf/ciona01/G126/seq_dir/hrs/G126P603918R.T0/G126P603918RC9.T0.seq_6 734 0    734  ABI
RHGLDRWRISCLRISLWGIPLPKYQNXTRC*WIIHRXSNVQRDRFCKSFGIFPVVSQNHS
FQTANFDHYTYRVSL*TT*SKQIFKSVMRSILTALIDALHISLISCVFVSS*FFD*KRIA
T*FTEMS*YPGRKMTNSFRRFAAKIIASNYQFGGGRSGLTSHPLSWLRTLSVNSAQVVLF
RHNYSTLISVTSHRSSRT*SV*TNNSVKWLVQVAKSTLCRGSRCV*RHKQVLVNXPQHGV
SVSKX

>scf/ciona01/G126/seq_dir/hrs/G126P606937R.T0/G126P606937RD6.T0.seq    723
            0    723  ABI
            Length = 723

  Minus Strand HSPs:
this clone bridges the gap
 Score = 276 (97.2 bits), Expect = 5.4e-26, Sum P(2) = 5.4e-26
 Identities = 57/63 (90%), Positives = 57/63 (90%), Frame = -1

Query:     2 LFV-RDIVRSLRHRGRRRKIKFLFLSNSRSNRVLTVCTQTXSSCFNLRCELIAEVRLPTN 60
             LFV RDIVRSLRHRGRRRKIKFLFLSNSRSNRV T CTQT SSCFNLRCELIAEV  PTN
Sbjct:   705 LFVVRDIVRSLRHRGRRRKIKFLFLSNSRSNRVSTFCTQTFSSCFNLRCELIAEVGWPTN 526

Query:    61 FAG 63
             FAG
Sbjct:   525 FAG 517

 Score = 35 (12.3 bits), Expect = 5.4e-26, Sum P(2) = 5.4e-26
 Identities = 6/6 (100%), Positives = 6/6 (100%), Frame = -3

Query:    64 ECPTRS 69
             ECPTRS
Sbjct:    52 ECPTRS 35

>scf/ciona01/G126/seq_dir/hrs/G126P607974F.T0/G126P607974FF7.T0.seq    735
            0    735  ABI
            Length = 735

  Plus Strand HSPs:

 Score = 124 (43.7 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 22/22 (100%), Positives = 22/22 (100%), Frame = +2

Query:     6 SSCFNLRCELIAEVGWPTNFAG 27
             SSCFNLRCELIAEVGWPTNFAG
Sbjct:    38 SSCFNLRCELIAEVGWPTNFAG 103

 Score = 113 (39.8 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 21/21 (100%), Positives = 21/21 (100%), Frame = +2

Query:    30 PTRSVLQVIRNFPCSFAEPFF 50
             PTRSVLQVIRNFPCSFAEPFF
Sbjct:   572 PTRSVLQVIRNFPCSFAEPFF 634







GCiWno839_n06.b1 exon 2
GCiWno135_g10.b1 exon 2
GCiWno151_k07.b1 exon 2
GCiWno527_f10.b1 exon 2
GCiWno39_n10.b1 exon 2
GCiWno240_b21.g1 exon 2
GCiWno865_b24.g1 exon 2
f_GECi27_c13 exon 2
GCiWno1029_e23.g1 exon 2



GCiWno760_g24.b1 exon 3
GCiWno302_d05.b1 exon 3
GCiWno42_i03.b1 exon 3
GCiWno106_e02.b1 exon 3
GCiWno426_l10.b1 exon 3
GCiWno510_b17.b1 exon 3
GCiWno307_h23.b1 exon 3

GCiWno954_j01.g1 last of seq
GCiWno491_d01.g1 last of seq
GCiWno510_e17.g1 last of seq
GCiWno955_i14.g1 last of seq

>GCiWno527_f10.b1 CHROMAT_FILE: GCiWno527_f10.b1 PHD_FILE: GCiWno527_f10.b1.phd.1
           CHEM: term DYE: big TIME: Wed Oct 17 12:16:19 2001
           TEMPLATE: GCiWno527_f10 DIRECTION: fwd
          Length = 864

 Score = 73.4 bits (177), Expect = 5e-13
 Identities = 33/34 (97%), Positives = 34/34 (99%)
 Frame = +2

Query: 1   SPNKVIFPIEQINLAIANVVCAIMFGHRYQHGNK 34
           SPN+VIFPIEQINLAIANVVCAIMFGHRYQHGNK
Sbjct: 98  SPNEVIFPIEQINLAIANVVCAIMFGHRYQHGNK 199

>GCiWno527_f10.b1_1
FCIL*RNERICCTPCTNGSRGTRSDPYRKVPKFPERSDFSNRADQLGHCERRVCNHVWAS
IPTRKQGTAYSL*NINDLMWSDWAV*NQY*RLR*AQV**VTCYRQILRDRKYNTDFKLLT
QVETYSRFDKNQKH*LKNRCS*KDKFG**HSY*NTLPFS*F*IKSRNRMLPPVLEITRPL
NSGLYAPLIAPQFQTLTPSSSWCRVCIRSFRPNPSRYENDPRVLRHRRLVADDSKASPAA
PMQSLRRALVXFVCEGIVRPXSSVVANRGSIFGSFRTNRVREGSCSHA
>GCiWno527_f10.b1_2
FVSSEETKGYVAHHVQMEAVELVRILTEKCRSSPNEVIFPIEQINLAIANVVCAIMFGHR
YQHGNKVQLTACKT*MI*CGLTGLCKTNIDAFDKRRYSRLPVTGRYSEIGSIILILSF*L
KLRPIRVSIKTKSTD*KIGVVKKTNLGNNIHTKIRCPFPNFKLSRGIECCRLCWRSRDP*
IPVCMHHLLHLNFKR*PHRVRGVVSAFEVFALIPRGMKMTPASFVTDD*LRMTRKLRRRL
RCNRSGERSXCLFVRVLLGHXAPWSPIVVLFLAVFAQIAFARAAVRT
>GCiWno527_f10.b1_3
LYPLKKRKDMLHTMYKWKPWNSFGSLPKSAEVPRTK*FFQSSRSTWPLRTSCVQSCLGID
TNTETRYSLQLVKHK*FNVV*LGCVKPILTPSISAGIVGYLLPADTPR*EV*Y*F*AFNS
S*DLFAFR*KPKALTKK*V*LKRQIWVITFILKYAALFLILN*VAE*NVAACAGDHATPK
FRSVCTTYCTSISNVDPIEFVVSCLHSKFSP*SLAV*K*PPRPSSQTISCG*LESFAGGS
DAIAPASARXVCL*GYC*AIXLRGRQSWFYFWQFSHKSRSRGQLFAR

>GCiWno518_p11.g1_1 walk 1
CRLCWRSRDP*IPVCMHHLLHLNFKR*PHRVRGVVSAFEVFALIPRGMKMTPASFVTDD*
LRMTRKLRRRLRCNRSGERSFCLFVRVLLGHKSSVVSQSWFYFWQVFAQIAFATASCSHA
FVRINANKMVAISSTLEY*AIDQNNSS*FACDQYTCSNATDPQEVTFFG*QHSIFPHVTH
CCYKTQNTIFFTCTKHPRSQTLVVDSFALS*PLGCFWNLKPHTKTVKAN*SSPKPIHPSG
KREQTRLCSKPIVICR*VKS**AFITAA*SLTTAFIPIVVY*FIPAYNKRSRL*RIVKI
>GCiWno518_p11.g1_2
AACAGDHATPKFRSVCTTYCTSISNVDPIEFVVSCLHSKFSP*SLAV*K*PPRPSSQTIS
CG*LESFAGGSDAIAPASARFVCL*GYC*AIKAPWSANRGSIFGKFSHKSRSRRQAVRTH
L*ELMRTKWSQSRPRSNTKPSIKTIQVDLHVINIHALMQLTHRRLLFSVNSIAYSPTSRT
AVTKPKTRSFLPAQNTPDHRL*LLIHLH*VSH*GAFGI*NHIQKR*KLIEVVPNPFTRVA
NESRHDYAPSQSLYVVK*NRDELLSPQPSR*LPHSFP*WFTDLYQHIINALACNES*R
>GCiWno518_p11.g1_3
PPVLEITRPLNSGLYAPLIAPQFQTLTPSSSWCRVCIRSFRPNPSRYENDPRVLRHRRLV
ADDSKASPAAPMQSLRRALVLFVCEGIVRP*KLRGQPIVVLFLASFRTNRVRDGKLFARI
CKN*CEQNGRNLVHARILSHRSKQFKLICM*SIYML*CN*PTGGYFFRLTA*HIPPRHAL
LLQNPKHDLFYLHKTPQITDFSC*FICTKLAIRVLLEFKTTYKNGES*LK*SQTHSPEWQ
TRADTIMLQANRYMSLSEIVMSFYHRSLVVDYRIHSHSGLLIYTSI**TLSPVTNRED

GCiWno518_p11.g1
GCiWno527_f10.g1
GCiWno813_n15.g1
GCiWno155_l18.b1

>GCiWno813_n15.g1_4
QTDSCDDSKASPAAPMQSLRRALVLLFGEGIVRP*KLRGSANRGSIFGKFRTNRVRDGKL
FARICKN*CEQNGRNLVHARILSHRSKQFKLICM*SIYML*CN*PTGGYFFRLTA*HIPP
RHALLLQNPKHDLFYLHKTPQITDFSC*FICTKLAIRVLLESKTT*KNGKS*LK*SQTHS
PEWQTRADTIMLQANRYMSLSEIVMSFYHRSLVVDYRFHSHSGLLIYTSI**TLSPVTNR
EDQSY*QHLGSSLC*TAVYGI*SFH*DPFLDLVI*TCFYTTL*LTPYGYRAE
>GCiWno813_n15.g1_5
PDG*LR*LESFAGGSDAIAPASARFVVW*GYC*AIKAPWVSQSWFYFWQVSHKSRSRRQA
VRTHL*ELMRTKWSQSRPRSNTKPSIKTIQVDLHVINIHALMQLTHRRLLFSVNSIAYSP
TSRTAVTKPKTRSFLPAQNTPDHRL*LLIHLH*VSH*GAFGI*NHIKKR*KLIEVVPNPF
TRVANESRHDYAPSQSLYVVK*NRDELLSPQPSR*LPISFP*WFTDLYQHIINALACNES
*RSKLLTTSWFKPLLNCCLWHMILSLGPLSRSRNLNLLLYHIIAHAIWVPS*X
>GCiWno813_n15.g1_6
RRIVAMTRKLRRRLRCNRSGERSFCCLVRVLLGHKSSVGQPIVVLFLASFAQIAFATASC
SHAFVRINANKMVAISSTLEY*AIDQNNSS*FACDQYTCSNATDPQEVTFFG*QHSIFPH
VTHCCYKTQNTIFFTCTKHPRSQTLVVDSFALS*PLGCFWNLKPHKKTVKAN*SSPKPIH
PSGKREQTRLCSKPIVICR*VKS**AFITAA*SLTTDFIPIVVY*FIPAYNKRSRL*RIV
KIKVINNILVQAFAKLLFMAYDPFIRTPF*IS*FEPAFIPHYSSRHMGTELX


>LQW233975.x1_1
QKETAVQLIGPCKSWIYFVRNSLEICIIW*RNYDCGNFSFYVEF*FRLR*NIKYFVCLVK
LVIN*SFLLSGTDLCI**NSELLTFWCSTIMKSSKKHCYVKDASLVADRYSIHLRKFLKV
*GLSLTAQ*HRETNG*N*K*QL*SMFTVLYPLKKRKDMLHTMYKWKPWNSFGSLPKSAEV
LRTK*FFQSSRSTWPLRTSCVQSCLGIDTNTETRYSL*NINDLXWPDWAV*NQY*RLR*A
QI**VTCYRQILEIGSXY*FKX*LQ*DLSRSIEPRPDINWLSTTWYNSSKSALPFK*GKS
AGETANRLQCHKAPVLSFLLPSRSSLLLASLPXXXXXX
>LQW233975.x1_2
KRKRQCSL*VHVNRGYISCVILLRYA*SGDVTTTVGIFPFMLSFDSD*DKILSTLCVW*S
LL*TNLFYFQVRTCVFDETRNC*RSGAQQL*SHQRSIVTSKTHLWWPTDIRFI*ENFSRS
RGCL*QHNDTGRRMDETKNDNCKACSPFCIL*RNERICCTPCTNGSRGTRSDPYRKVPKF
SEQSDFSNRADQLGHCERRVCNHVWASIPTRKQGTACKT*MIXCGLTGLCKTNIDAFDKR
RYSRLPVTGRYSR*EVXTDLSXNSSETYRVR*NQGLI*IGCQPHGTTHLRARFHLNREKV
QVKRQIGCNAIRHLCCRSSYPPGLPCF*PHFXXXXXXX
>LQW233975.x1_3
KGNGSAAYRSM*IVDIFRA*FS*DMHNLVT*LRLWEFFLLC*VLIQIEIKY*VLCVFGKA
CYKLIFFTFRYGPVYLMKLGTADVLVLNNYEVIKEALLRQRRIFGGRPIFDSFKKISQGL
GVVFNSTMTQGDEWMKLKMTIVKHVHRFVSSEETKGYVAHHVQMEAVELVRILTEKCRSS
PNKVIFPIEQINLAIANVVCAIMFGHRYQHGNKVQLVKHK*FXVA*LGCVKPILTPSISA
DIVGYLLPADTRDRKYXLI*ALTPVRLIAFDRTKA*YKLVVNHMVQLI*ERASI*IGKKC
R*NGKSVAMP*GTCVVVPPTLPVFPASSLTSXXXXXX

>GCiWno106_e02.b1 CHROMAT_FILE: GCiWno106_e02.b1 PHD_FILE: GCiWno106_e02.b1.phd.1
           CHEM: term DYE: big TIME: Wed Sep  5 07:41:21 2001
           TEMPLATE: GCiWno106_e02 DIRECTION: fwd
          Length = 919

 Score = 63.2 bits (151), Expect = 5e-10
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 1   EFQDLISLNEQFGDVIGSGSQVDVIPWMK 29
           EFQDLISLNEQFGDVIGSGSQVDVIPWMK
Sbjct: 502 EFQDLISLNEQFGDVIGSGSQVDVIPWMK 588

>GCiWno106_e02.b1_1 repeat seq all reads stop at IGS* cannot pass it
IGS*TVCSKTTAQVMVIVCFQQNDGQSWA*LRPNPQ*FSRLNDVMCKI*LIVRQTLVFLV
ISTFDQNPSIFASRETS*WPFTRHNIRGGKWANRLAARDENNRLKLSVRRRTKK*TSRPC
STLAR*LVNSGRGYHGTKRVQIVF*LFTVHVKCLQHIIYFTPEFYFKEFQDLISLNEQFG
DVIGSGSQVDVIPWMKVCMT*QT*NADHLRV*TR*VQNQVLIGSCNDVHSAHTSPSRDCL
FLFLLSTLSYPSSSLYL*TESKREMGLFLTERLNG*QKNT*PVLXYV*RYSRDLXAIFLF
IFSCYVX
>GCiWno106_e02.b1_2
LGHRLFAVKRRHRSWS*SVSSKTTANHGLSCVQIHNDFQG*TM*CARFS*LSAKLWCFW*
FQLLIKIPRFSPPVKHHNGHLHVTTSAEENGQTGSQLATKIIASNYQFEGGRKSKRHVRV
RRSHANS*TQVGVTTERKESRSCFDCLPCM*SVCSISYILHLNFILRNFKT*SV*TNNLE
MLLVPEARSTSYPG*RCV*RNKLKTLTTCEFELGEFRTKF*SGLVMTCILHILPQAATAF
FFFFCPLSPTLLLRFTCRPRAKEKWGYF*LNA*TDDRRTRDRYSXTCNGIHGILXRFFYL
FFHVT*
>GCiWno106_e02.b1_3
WVIDCLQ*NDGTGHGHSLFPAKRRPIMGLAASKSTMIFKVERCDVQDLANCPPNFGVFGD
FNF*SKSLDFRLP*NIIMAIYTSQHPRRKMGKPARSSRRK*SPQIISSKADEKVNVTSVF
DARTLTRELRSGLPRNEKSPDRVLIVYRACEVFAAYHIFYT*ILF*GISRPDQFERTIWR
CYWFRKPGRRHTLDEGVYDVTNLKR*PLASLNSVSSEPSSNRVL**RAFCTYFPKPRLPF
SFSFVHSLLPFFFALLVDREQKRNGVIFN*TPKRMTEEHVTGTQXRVTVFTGSXRDFFIY
FFMLR



>GCiWno151_b22.b1_4
KWCYRVRSXFSYIRNISCGVIS*VRDHH*GQVV*FVWLEMLNDFFYPMSGHIILNWSQAW
AFYFPVCTFLRTRGGGGSSSWQNLLFLCLRLEESETMCLLYSRERGKTHL*HLTHGTPLT
HNIQIS*SCFKQLTTAYMEVVTKRFYNSLNVLRLLPIRTRK*NEKVTHLTPLYQF*NTRI
HVFTSASGIMSRNIDFDKLSV*CRLISIKLLNSCCKKFSWLQKSMPWRI*EPKIIYIRTK
KNKNYENKNQKNDIKQPCC*NHRFPHSTQCTGN*GQY*R*YYWKHSMTHDRAVVLLESSL
*PE
>GCiWno151_b22.b1_5
KMVLSSSILXQLY*KYFLWGH*LSQRPSLRPSRLVCLVGNVE*LLLPYEWTHYFKLVASM
GVLFPGLYLFKNQRWRW*LVLAKSALPLFTLGRI*NDVSVI**RAREDTPLTFNTWDTFN
T*YPNILIVF*TINNSVYGSRNETVL*FFECSSFITNSN*KIE*KGDPSYSTLSILKYQN
TCVYFCKWDHVAQYRF*QVVRVMSAHFNQIVEFLLQKVFMVTKEHALAYIRTKNYIYKNQ
KKQKLRK*KPKK*YKTTLLLKS*VSP*HTVHRKLGPVLAVILLETFYDA*SCSRFTGKQS
MTRX
>GCiWno151_b22.b1_6
NGAIEFDPXSVILEIFPVGSLVKSETITEAKSFSLFGWKC*MTSSTL*VDTLF*IGRKHG
RFISRFVPF*EPEVEVVARLGKICSSFVYAWKNLKRCVCYIVESEGRHTFNI*HMGHL*H
IISKYPDRVLNN*QQRIWKS*RNGFIIL*MFFVYYQFELENRMKR*PILLHSINFKIPEY
MCLLLQVGSCRAISILTSCPCNVGSFQSNC*IPVAKSFHGYKRACLGVYKNQKLYI*EPK
KTKITKIKTKKMI*NNLAVKIIGFPIAHSAQEIRASISGNIIGNIL*RMIVQSFYWKAVY
DPX

>GCiWno106_e02.b1_1
IGS*TVCSKTTAQVMVIVCFQQNDGQSWA*LRPNPQ*FSRLNDVMCKI*LIVRQTLVFLV
ISTFDQNPSIFASRETS*WPFTRHNIRGGKWANRLAARDENNRLKLSVRRRTKK*TSRPC
STLAR*LVNSGRGYHGTKRVQIVF*LFTVHVKCLQHIIYFTPEFYFKEFQDLISLNEQFG
DVIGSGSQVDVIPWMKVCMT*QT*NADHLRV*TR*VQNQVLIGSCNDVHSAHTSPSRDCL
FLFLLSTLSYPSSSLYL*TESKREMGLFLTERLNG*QKNT*PVLXYV*RYSRDLXAIFLF
IFSCYVX
>GCiWno106_e02.b1_2
LGHRLFAVKRRHRSWS*SVSSKTTANHGLSCVQIHNDFQG*TM*CARFS*LSAKLWCFW*
FQLLIKIPRFSPPVKHHNGHLHVTTSAEENGQTGSQLATKIIASNYQFEGGRKSKRHVRV
RRSHANS*TQVGVTTERKESRSCFDCLPCM*SVCSISYILHLNFILRNFKT*SV*TNNLE
MLLVPEARSTSYPG*RCV*RNKLKTLTTCEFELGEFRTKF*SGLVMTCILHILPQAATAF
FFFFCPLSPTLLLRFTCRPRAKEKWGYF*LNA*TDDRRTRDRYSXTCNGIHGILXRFFYL
FFHVT*
>GCiWno106_e02.b1_3
WVIDCLQ*NDGTGHGHSLFPAKRRPIMGLAASKSTMIFKVERCDVQDLANCPPNFGVFGD
FNF*SKSLDFRLP*NIIMAIYTSQHPRRKMGKPARSSRRK*SPQIISSKADEKVNVTSVF
DARTLTRELRSGLPRNEKSPDRVLIVYRACEVFAAYHIFYT*ILF*GISRPDQFERTIWR
CYWFRKPGRRHTLDEGVYDVTNLKR*PLASLNSVSSEPSSNRVL**RAFCTYFPKPRLPF
SFSFVHSLLPFFFALLVDREQKRNGVIFN*TPKRMTEEHVTGTQXRVTVFTGSXRDFFIY
FFMLR

Walk 1
>GCiWno307_h23.g1_1
PGDYEIIYL**ACVLCKQIVIVYVWFVCRVKITTLVGIPRDTDISQCSQSRI*RNKHANV
QVTMNLLSALRHSKPIVRGKLG*WCQQPTRSKCIAKLV*WLRVRKLVNLATRANVIIGII
QINASRLVCVVIMKSLSAANRYFACNNE*AVLSSSFVFLLTNT*TLYDLIHCIVT*EWPF
QNS*NNFNIT*WIEQNNLFARYHVTHKRICDVRIRNDFQG*TR*CARFS*LSAKLWCFLV
ISTFDQNPSIFASR*TS*WPFTRHNIRRRKMGKPARNSRRKLSPQIISSEGGPKSKX
>GCiWno307_h23.g1_2
LVIMRLFTYNRRVYYVNKSLLFTYGLSVE*K*PRWWEFPAIPIYLSVRRVEYDVISMRMC
KSQ*ICCLHCVTVNRLFVENSVNGVNNQHEANVSRNLSSGCECGSWSTLLLVRM*LSE*F
RLTHHV*CVSS**NHCRLPIGILHVTTNKQFCLLVLFFY*RILKRYMISYIVLLRKSGLF
KTAETTLTSRDGLNKIIYSHATT*LINGFVTSESVMIFKVERGDVQDLANCPPNFGVFW*
FQLLIKIPRFSPPVEHHNGHLHVTTSGGGKWANRLATRDENYPLKLSVPKAGQKVN
>GCiWno307_h23.g1_3
W*L*DYLPIIGVCIM*TNRYCLRMVCL*SENNHAGGNSPRYRYISVFAE*NMT**ACECA
SHNEFVVCIASQ*TDCSWKTRLMVSTTNTKQMYRETCLVVASAEVGQPCYSCECNYRNNS
D*RITFSVCRHNEITVGCQSVFCM*QRISSSVF*FCFFINEYLNVI*SHTLYCYVRVAFS
KQLKQL*HHVMD*TK*FIRTLPRDS*TDL*RQNP**FSRLNAVMCKI*LIVRQTLVFFGD
FNF*SKSLDFRLPLNIIMAIYTSQHPAEENGQTGSQLATKIIPSNYQFRRRAKK*

Walk 2
>GCiWno302_d05.g1_1
WTSFTGNSYT*LAVLLLETAMIMTDRLFSRNSDLHLFATMIFLA*QCCTR*VK*R*SVFP
EIVFCI*NSGK*LVRY*TVGIFQKKKSN*NRNTGHVIVDHG*CTKSTEFNDDR*CAWQHW
RRTCGCELPVENEVVIVA***NIDGRIPSKCLLSR*IVKRFPFSTKQSQFILEIVFAAAW
RL*DYLPIIGVCIM*TNRYCLRMVCL*SENNHAGGNSPRYRYISVFAE*NMT**ACECAS
HNEFVVCIASQ*TDCSWKTRLMVSTTNMKRMYRETCLVVASAESCQPCYSYECNYRNNSD
YASRLXWX
>GCiWno302_d05.g1_2
GRRLLETAIHDWPSFYWKQL*S*LIAFFLETPTYTCSLQ*SFSRNNAARDRSSSVDQCFP
KLYFVFKIPENDLYVIKQSEFSRKKNRIKIETLVT*SLTMVNVQSPLSSMMIDNALGNTG
DEHAGANYLWRTKS*LWLNNKILTVEYLRSVYFPGKS*NDFHSRLSKASLFSKSYLRPPG
DYEIIYL**ACVLCKQIVIVYVWFVCRVKITTLVGIPRDTDISQCSQSRI*RNKHANVQV
TMNLLSALRHSKPIVRGKLG*WCQQPT*SECIAKLV*WLRVRKVVNLATRTNVIIXIIQI
THHVXCG
>GCiWno302_d05.g1_3
DVVYWKQLYMTGRPSTGNSYDHD*SPFF*KLRPTLVRYNDLSRVTMLHAIGQVALISVSR
NCILYLKFRKMTCTLLNSRNFPEKKIELK*KHWSRDR*PWLMYKVH*VQ***IMRLATLA
TNMRVRITCGERSRDCGLIIKY*RSNTFEVFTFPVNRETISILD*AKPVYSRNRICGRLE
IMRLFTYNRRVYYVNKSLLFTYGLSVE*K*PRWWEFPAIPIYLSVRRVEYDVISMRMCKS
Q*ICCLHCVTVNRLFVENSVNGVNNQHEANVSRNLSSGCECGKLSTLLLVRM*LSX*FRL
RITFXV

Walk 3
LQW215364.x3 
LQW215364.x3.phd.1 LQW215364.y1 

          12:01:58 2001 TEMPLATE: LQW215364 DIRECTION: fwd
          Length = 982

 Score = 39.1 bits (89), Expect = 0.005
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = -1

Query: 1  KLYFVFKIPENDLYVIK 17
          KLYFVFKIPENDLYVIK
Sbjct: 61 KLYFVFKIPENDLYVIK 11

>LQW215364.x3_4
APPVLRVQGVCSLGRDCALFLIFVFPPFVSVILGSFMRFLVLLPFVGRFYTAVQPANRRL
GIARSVDPL*IS*LDPLLYHIIAHAILVYPHN*VGHGKQYLEFV*SVDIICIQLTMFGIR
NIFVYYFICFASCYRLALSVHAATVKQKIVPSLHFKVMIQRNSPNE*STATTTPRSHR*F
TNQVSTHANQLETIARNPVANREVTINQSV*RFSRNKPCR*GRVMACILIPVVSRSRARF
VQHFSSAVRVHLSRDLQRSSPTTGCYNYSTRWHSLEFVRPTLVRYNDLSRVTMLHAIGQV
ALISVSRNCILYLKFRKMTCTLLKLHX
>LQW215364.x3_5
CPTCAAGTRCLFSRSGLCPFSDLRFSPFCVGYPRVFYALFGFASIRR*VLHRGTACQPSF
RHCPFSRPVVDLVVGPAFIPHYSSRHISVSP*LSGPW*TIFRIRLKR*HYLYPVDDVWN*
KYLCILLYLFRFLLSISA*RARCNG*TKNRAVSAF*SDDSKKFSQRVIYRHHHTEVASMI
Y*PSEHTCKPIGNNRTQSGRKS*SYN*SVSLAV*PQ*TLSLRPSNGVYPHTCGFPLACKI
CTTFLVSCPSSFVT*STAILPNNGMLQLFNPMAFARVRPTYTCSLQ*SFSRNNAARDRSS
SVDQCFPKLYFVFKIPENDLYVIKAALX
>LQW215364.x3_6
PHLCCGYKVFVLSVGIVPFF*SSFFPLLCRLS*GLLCAFWFCFHS*VGFTPRYSLPTVV*
ALPVQ*TRCRSRSWTRFYTTL*LTPY*CIPIIEWAMVNNI*NSFKALTLFVSS*RCLELE
ISLYITLFVSLPVID*RLACTLQRLNKKSCRLCILK**FKEILPTSNLPPPPHRGRIDDL
LTK*AHMQTNWKQSHAIRSQIVKLQLISQFSGLAAINLVVKAE*WRVSSYLWFPARVQDL
YNISRQLSEFICHVIYSDPPQQRDVTIIQPDGIRSSSSDLHLFATMIFLA*QCCTR*VK*
R*SVFPEIVFCI*NSGK*LVRY*SCTX

>GCiWno164_d18.b1_1
SDLSLPARKTTARSAFYPNFRNAIKIFDFLTID*TIGCDSGKQSSPLFINIQLTIADFLL
IDVEQRNTDSHTNMV*FATSSIALSQSQSTTRNNQHLMMT**WH*PRTCSGLDKTRCQLL
CNGSLYI*CILKNASER*LLWYRMIIL*FSFNVYWVGIWRCTFLF*FIVLYR**LFTEL*
KGVFIPFGFKQKRFIMYKKSNFTTSLQTALLVKTLLGNIDIMC*R*LSYTLHYHILEPI*
**YVXPVLLIXFVATYCVQLYLMQIEFNKIYHIFAESCRT*LSYRPRRTPAYL*PTASSI
LGKQYARNISSFDIYVHPHTSCYHP
>GCiWno164_d18.b1_2
RILACLPGKLLHDPHFILIFETL*KFSIFSQSIEQLDATQVSNLHRCSLTFS*QSLTSS*
LM*NKGTQTHIQTWCDSRHRR*LYRRVNRPPGTIST***RNNGTDHGRVRGWTRHDVNYY
AMGLCIYDAF*RMPAKGDCYGTE*LYCNSVLMYIGLGFGGVRFYFSSSSYIGSNYLQNCK
RVFLSHLVLNKNVSLCIKKVTSRLLSKQRC**KHY*EI*ILCANANYLIPCIIIY*NLYS
NDTXFLCY*XFLLQHIVFNYILCKLNLIKFTIFLQNHAELDSVIGPGELPHISDRRRLPY
LESSMHEIFRHSTFTXTHIPHVTTX
>GCiWno164_d18.b1_3
GS*LACQENYCTIRILS*FSKRYKNFRFSHNRLNNWMRLR*AIFTVVH*HSVNNR*LPLD
*CRTKEHRLTYKHGVIRDIVDSFIAESIDHPEQSALNDDVIMALTTDVFGAGQDTMSTTM
QWVFVYMMHFKECQRKVTVMVQNDYIVIQF*CILGWDLAVYVFILVHRPI*VVIIYRIVK
GCFYPIWF*TKTFHYV*KK*LHDFSPNSVVSKNTIRKYRYYVLTLIILYPALSYIRTYIV
MIRXSCVIDXFCCNILCSTISYAN*I**NLPYFCRIMPNLTQLSAPENSRISLTDGVFHT
WKAVCTKYFVIRHLRXPTYLMLPP

>GCiWno157_d09.g1_1
LN*SILLVLK*NFDRSYVLRH*HYKRFRVLFWVCRVMGDLLRHKRHSGVPKVQGFENSFQ
FARTQIC*VRSTPGSVFSETNFSKN*VCFIRGRKSSSLSGQPVVCVTITNNDIVHPYMIR
SSVTVG*NLKTMIGKYNLERSYANALSFYSSPFLSIQLCCVFKF*LIVFFICASQLIPSI
FRFFRSFETL*KFSIFSQID*TIGCDSGKQSSPLFINIQLTIADFLLIVVEQRNTDSHTS
MV*FATSSIALSQSQSTTRNNQHLMMTX*WH*PRTCSXAGQTRCQLLXHGVFXYMMHF*E
CXXKVTV
>GCiWno157_d09.g1_2
*IKVYSWC*NKTLTAPTFCDIDITNGFVYCFGFVASWETCYVIKDIAVCRKCKDSRIPSS
SPEPRSVEFGRPRVRYLARQTLAKTEFVLYGEGNQARCRGNRWFASRSQTMTLFIHI*LD
LL*R*GRI*KQ**ESTTLNEATRMLCPFILPPFYLYSSAVFLNFDL*CSLSALPN*SLQF
LDFSEVSKRSKSFRFSHKSIEQLDATQVSNLHRCSLTFS*QSLTSS*LL*NKGTQTHIQA
WCDSRHRR*LYRRVNRPPGTIST***RYNGTDHGRVRXLDRHDVNYYXMGSLXI*CIFKN
AXRR*LX
>GCiWno157_d09.g1_3
KLKYTLGVKIKL*PLLRFATLTLQTVSCIVLGLSRHGRLVTS*KT*RCAESARIREFLPV
RPNPDLLSSVDPGFGI*RDKL*QKLSLFYTGKEIKLVVGATGGLRHDHKQ*HCSSIYD*I
FCNGRVEFENNDRKVQP*TKLRECFVLLFFPLFIYTALLCF*ILTYSVLYLRFPTNPFNF
*IFPKFRNALKVFDFLTNRLNNWMRLR*AIFTVVH*HSVNNR*LPLDCCRTKEHRLTYKH
GVIRDIVDSFIAESIDHPEQSALNDDXIMALTTDVFGGWTDTMSTTMXWGLXIYDAFLRM
PXEGDC

>GCiWno596_c24.g1 CHROMAT_FILE: GCiWno596_c24.g1 PHD_FILE: GCiWno596_c24.g1.phd.1
           CHEM: term DYE: big TIME: Thu Oct 25 11:51:48 2001
           TEMPLATE: GCiWno596_c24 DIRECTION: rev
          Length = 914

 Score =  153 bits (383), Expect = 4e-37
 Identities = 82/87 (94%), Positives = 83/87 (95%), Gaps = 4/87 (4%)
 Frame = +2

Query: 1   NNWMRLR-AIFTVVH-HSVNNR-LPLDC-RTKEHRLTYKHGVIRDIVDSFIAESIDHPEQ 56
           N+WMRLR AIFTVVH HSVNNR LPLDC RTKEHRLTYKHGVIRDIVDSFIAESIDHPEQ
Sbjct: 380 NDWMRLR*AIFTVVH*HSVNNR*LPLDCCRTKEHRLTYKHGVIRDIVDSFIAESIDHPEQ 559

Query: 57  SALNDDVIMALTTDVFGAGQDTMSTTM 83
           SALNDDVIMALTTDVFGAGQDTMSTTM
Sbjct: 560 SALNDDVIMALTTDVFGAGQDTMSTTM 640

>GCiWno596_c24.g1
TTCGGTATTTAGCGAGACAAACTTTAGCAAAAACTGAGTTTGTTTTATACGGGAAAGGAAATCAAGCTCGTTGTCGCGGC
AACCGGTGGTTTGCGTCACGATCACAAACAATGACATTGTTCATCCATATATGATTAGATCTTCTGTAACGGTAGGGTAG
AATTTGAAAACAATGATAGGAAAGTACAACATTGAACGAAGCTACGCGAATGCTTTGTCCTTTTATTCTTCCCCCTTTTT
ATCTACAGCTCTGCTGTGTTTTTAAATTTTGACTTATAGTGTTCTTTATCTGCGCTTCCCAACTAATCATTTCAATTTTT
AGATTTTTCCGAAGTTTCGAAACGCTCTAAAAGTTTTCGATTTCCTCACAAATCGATTGAACGATTGGATGCGACTCAGG
TAAGCAATCTTCACCGTTGTTCATTAACATTCAGTTAACAATCGCTGACTTCCTCTTGATTGTTGTAGAACAAAGGAACA
CAGACTCACATACAAGCACGGTGTGATTCGCGACATCGTCGATAGCTTTATCGCAGAGTCAATCGACCACCCGGAACAAT
CAGCACTTAATGATGACGTAATAATGGCACTGACCACGGACGTGTTCGGGGCTGGACAAGACACGATGTCAACTACTATG
CAATGGGTCTTTGTATATATGATGCATTTTAAAGAATGCCAGCGAAAGGTGACTGTTATGGTACAGAATGATTATATTGT
AATTTCAGTTTACTGGATATTGGGTTGGGAATTGGCGGAGTACGTTTTTATTTAGTTCATCGCCCCATTTAGGAGGAATT
ATTTACCGATTATAGGAAGGGGTTTTTTATCCCATTNGGTTTTAACAAAAACGTTATTTTGTTTAAAAAAAGTTTTTGCC
AATTTTTTTTAAACAGGTGGTTAGTAAAACCTTA

>SEQUENCE 26, 81 no introns 37% to 2U1 human 41% to seq 2
MEITTFLLCMLMLVLIMFMWRRSSTNFPPGIEGIPLFGCIPSLGMHKERTIAKWGREKG
WPIFYLRMGITKIEVLNTFESIEEAYVKKGQYFIDRHLPIFLRHYSTGKGVVFLNGEK
WKVQRRFGIHTLRDLGMGKSGMESKIVHEIDHLSEYLVNNNQESGLVDITPIITRAVSNIVC
QLVFNRRFNLDEEFLFIDSVNNKLMKSVTTLKQIMLTLQHIPIFNRIPAIAKIK
XXXXXXXXXXXX
MRNYIKSHKETLDKNNPRDFIDAFLIASEEDKSEDTSFDDEQLLYYIQDLFFGGTDTTSF
TLTWTFLYLAMYPDKQEQLHAEIDEVLGSNGIVSMSCLDKMPYAQAVMQEIFRLRPLVPL
SMPRKTLSRITLMGYDIPKGTVFMPNIWSVHHNADRWPNPEDFMPERHIDSEGKFVKSKE
IIPFSLGPRNCLGIRLAEMEHFMFMIGLLQKLHFSLPEDQPPPDVRGSSFVVLLLPPDFNMKITTR*
AV873268 EST 
AV980934 EST N-terminal to C-helix
LQW19143.x1 
LQW135203.x1
JWB639.y1 
LGK1072.y1 NTERM 
LQW24275.x1 
LQW54158.x1 
LQW178557.y1

>Ortholog to seq 26 in Ciona savignyi no introns
MDFTSVLLFLLVVVLVFLWNRRGSGNFPPGFDGVPLLGCIPLFGAHRERSIAEWGREKG
SWPIFYIKLGITKVVVLNTFESIEEAFVKKGQYFVERHIPIFLKRYSKGGKGIVFSNGEI
WKHQRRFGIHTLRDLGMGKSGMENKIQSEIEHLSDYLVNSPNIVGKKSVDIVPIITKAVSNIIC
QLVFNTRFNLDDKITFIDSAAGIKLVKNASWVRQVKMTLCYVPLLNRIPTIAKLK
QEREALHNTRHDL
LRKYIQMHKETLDKGSPRDFIDAFLIAGEQDKEENSSFNDEQLLFYIQDLFFGGTDTTSF
TLTWTFLYLSLFPEKQKRLHDEIDEVIGSSGNISMSFLEKMPYAQAVMQEIFRVRPLVPL
GMPRKCGQNISLMGHNLPKDTSVIPNIWSAHHNPDRWPEPDSFLPERHIDSNGNFIKSKD
IIPFVLGPRNCLGIRLAEMEHFMFMVGLLQKLQFALPAGQGKVDTRGSSSIVLLLPPDVDLVITSR*

Identities = 336/498 (67%), Positives = 411/498 (82%)

savignyi     1 MDFTSVLLFLLVVVLV-FLWNRRGSGNFPPGFDGVPLLGCIPLFGAHRERSIAEWGREKG 59
               M+ T+ LL +L++VL+ F+W RR S NFPPG +G+PL GCIP  G H+ER+IA+WGREKG
intestinalis 1 MEITTFLLCMLMLVLIMFMW-RRSSTNFPPGIEGIPLFGCIPSLGMHKERTIAKWGREKG 59

Query:    60 SWPIFYIKLGITKVVVLNTFESIEEAFVKKGQYFVERHIPIFLKRYSKGGKGIVFSNGEI 119
              WPIFY+++GITK+ VLNTFESIEEA+VKKGQYF++RH+PIFL+ YS G KG+VF NGE 
Sbjct:    60 -WPIFYLRMGITKIEVLNTFESIEEAYVKKGQYFIDRHLPIFLRHYSTG-KGVVFLNGEK 117

Query:   120 WKHQRRFGIHTLRDLGMGKSGMENKIQSEIEHLSDYLVNSPNIVGKKSVDIVPIITKAVS 179
             WK QRRFGIHTLRDLGMGKSGME+KI  EI+HLS+YLVN+    G   VDI PIIT+AVS
Sbjct:   118 WKVQRRFGIHTLRDLGMGKSGMESKIVHEIDHLSEYLVNNNQESGL--VDITPIITRAVS 175

Query:   180 NIICQLVFNTRFNLDDKITFIDSAAGIKLVKNASWVRQVKMTLCYVPLLNRIPTIAKLKQ 239
             NI+CQLVFN RFNLD++  FIDS    KL+K+ + ++Q+ +TL ++P+ NRIP IAK+K 
Sbjct:   176 NIVCQLVFNRRFNLDEEFLFIDSVNN-KLMKSVTTLKQIMLTLQHIPIFNRIPAIAKIKN 234

Query:   240 EREALHNTRHDLLRKYIQMHKETLDKGSPRDFIDAFLIAGEQDKEENSSFNDEQLLFYIQ 299
                 L      + R YI+ HKETLDK +PRDFIDAFLIA E+DK E++SF+DEQLL+YIQ
Sbjct:   235 XXXXXXXXXXXXMRNYIKSHKETLDKNNPRDFIDAFLIASEEDKSEDTSFDDEQLLYYIQ 293

Query:   300 DLFFGGTDTTSFTLTWTFLYLSLFPEKQKRLHDEIDEVIGSSGNISMSFLEKMPYAQAVM 359
             DLFFGGTDTTSFTLTWTFLYL+++P+KQ++LH EIDEV+GS+G +SMS L+KMPYAQAVM
Sbjct:   294 DLFFGGTDTTSFTLTWTFLYLAMYPDKQEQLHAEIDEVLGSNGIVSMSCLDKMPYAQAVM 353

Query:   360 QEIFRVRPLVPLGMPRKCGQNISLMGHNLPKDTSVIPNIWSAHHNPDRWPEPDSFLPERH 419
             QEIFR+RPLVPL MPRK    I+LMG+++PK T  +PNIWS HHN DRWP P+ F+PERH
Sbjct:   354 QEIFRLRPLVPLSMPRKTLSRITLMGYDIPKGTVFMPNIWSVHHNADRWPNPEDFMPERH 413

Query:   420 IDSNGNFIKSKDIIPFVLGPRNCLGIRLAEMEHFMFMVGLLQKLQFALPAGQGKVDTRGS 479
             IDS G F+KSK+IIPF LGPRNCLGIRLAEMEHFMFM+GLLQKL F+LP  Q   D RGS
Sbjct:   414 IDSEGKFVKSKEIIPFSLGPRNCLGIRLAEMEHFMFMIGLLQKLHFSLPEDQPPPDVRGS 473

Query:   480 SSIVLLLPPDVDLVITSR* 498
             S +VLLLPPD ++ IT+R*
Sbjct:   474 SFVVLLLPPDFNMKITTR* 492

>sequence 30 2 accessions 37% to 1A1
IYCLLSWHRRPKNFPPGPRGFPVLGIVPYFGKYPEKVLSKFADQYESRVMSF
RMGRMDWIVLNDIETITQ
LQW211491.y1 
DEV3838.y1   

>sequence 31 1 accession 49% to 2U1
IHEVYRFRTLFPLGLPHKTSHQVILDSYVIPQGTT
NLWAVHNDPKVFDEPEEFKPERHLYGNGEFGRSPYVIPFSVGPRHCLGEQLASMMLFI
YLVSLVRSFEFLPDPKLNGLPDIRSGASGPVFLPKSFNVVAREL*
LQW215043.x2 
LQW162532.y1
LQW189216.y1
cilv035a12
GCiWno822_j06.b1

>cilv035a12 
          Length = 639

 Score = 89.3 bits (218), Expect = 6e-18
 Identities = 44/57 (77%), Positives = 47/57 (82%)
 Frame = +1

Query: 1   GTLRWAILCLLHYPEKQAKLRKEIIQVLGKEIDDVIVVRYDTKMPYASAFIHEVYRF 57
           GTLRWAILCLLHYPEKQAKLRKEIIQVLG   D  + +    +MPYASAFIHEVYRF
Sbjct: 184 GTLRWAILCLLHYPEKQAKLRKEIIQVLG---DQEVTILKKHEMPYASAFIHEVYRF 345

>cilv035a12
TTAAAACGAACCCTTCTCGGGTTTATAAACATACACGAAAAGACATATGACAGCACGAACATTAGGGACTTTATTGACGC
CTTTCTTCTGCTCAAGCATCGCCAACTGGACGAGTCATTTAACGACAAACAGTTAATACATTATATATACGACTTATTTT
TGGGCGGGACCGAAACAACGACTGGTACCCTACGATGGGCCATTCTATGTTTACTGCATTATCCTGAAAAGCAAGCCAAG
TTACGGAAAGAAATAATTCAAGTACTCGGAGATCAAGAAGTTACAATTCTAAAGAAACACGAGATGCCGTATGCAAGCGC
TTTCATTCACGAAGTTTATAGATTCAGGACTTTATTTCCTCTTGGTTTACCACATAAAACAAGTCATCAGGTTATTTTGG
ACAGCTACGTTATACCACAGGGAACAACGGTATGCACTAATCTTTGGGCGGTACACAACGACCCAAAGGTATTTGACGAG
CCCGAGGAATTTAAACCTGAGCGTCATCTTTATGGAAACGGGGAGTTCGGACGCTCTCCCTACGTCATACCCTTTTCAGT
TGGACCTCGTCACTGCTTAGGCGAGCAGCTAGCATCTATGATGTTGTTTATATATTTAGTTTCACTCGTTAGGAGTTTC

>cilv035a12_1
LKRTLLGFINIHEKTYDSTNIRDFIDAFLLLKHRQLDESFNDKQLIHYIYDLFLGGTETT
TGTLRWAILCLLHYPEKQAKLRKEIIQVLGDQEVTILKKHEMPYASAFIHEVYRFRTLFP
LGLPHKTSHQVILDSYVIPQGTTVCTNLWAVHNDPKVFDEPEEFKPERHLYGNGEFGRSP
YVIPFSVGPRHCLGEQLASMMLFIYLVSLVRSF

>GCiWno822_j06.b1 CHROMAT_FILE: GCiWno822_j06.b1 PHD_FILE: GCiWno822_j06.b1.phd.1
           CHEM: term DYE: big TIME: Wed Dec  5 21:05:01 2001
           TEMPLATE: GCiWno822_j06 DIRECTION: fwd
          Length = 818

 Score = 82.7 bits (201), Expect = 4e-16
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -3

Query: 1   YLVSLVRSFEFLPDPKLNGLPDIRSGASGPVFLPKSFNV 39
           YLVSLVRSFEFLPDPKLNGLPDIRSGASGPVFLPKSFNV
Sbjct: 279 YLVSLVRSFEFLPDPKLNGLPDIRSGASGPVFLPKSFNV 163

>GCiWno822_j06.b1
AAAATCAAAAGGCAAGCATAGTTAAAAAATAAAAACTTTTGACATGGCTGTGCCAAATGTATAGTATGTAACTTAATCGT
ATTAATATATGCATAAAACGTGTAGAAAAGAACGTCAGTTATAAGCGTTGTCGATGTACTCGAATCACAGCTCTCGAGCC
ACGACATTAAAACTTTTAGGCAAAAACACCGGGCCGCTGGCACCGCTTCTTATATCGGGTAAACCGTTTAACTTAGGATC
CGGAAGAAATTCGAAACTCCTAACCAGTGAAACTAAATATATAAACAACATCATAGATGCTAGCTGCTCGCCTAAGCAGT
GACGAGGTCCAACTGAAAAGGGATGACGTAGGGGGAGCGTCCGAACTCCCCGTTTCCATAAAGATGACGCTCAGGTTTAA
ATTCCTCGGGCTCGTCAAATACCTTTGGGAACATTTTTTGGGGCCCACTTTGGCCTAAATCTTATGTTCTATGGCTTGCT
GACGCGTATATCACTTCAGCCACGCAGCAAGATAGAATATAAACCATTTACCGTTGTTCCCTGTGGTATAACGTAGCTGT
CCAATATAACCTGATGACTTGTTTTATGTGGTAAACCAAGAGGAAATAAAGTCCTGAATCTATACACTTCGTGAATGAAT
GCGCTTGTATATGGCATCTCGTGTTTCTTCAGAATTGTAACTTCTTGATCTCCTGTTGTGGGGAANAATGGCATTAACTG
AAAATATTTTGTAAAAAAACAAGTTTTATCCTCGCGTATAGCAAGGCAACGGCAACGGCTACCATGAGTGGNTCGGTTTC
GTACACTATTCCTGCTCA

>GCiWno822_j06.b1_4
SRNSVRNRXTHGSRCRCLAIREDKTCFFTKYFQLMPXFPTTGDQEVTILKKHEMPYTSAF
IHEVYRFRTLFPLGLPHKTSHQVILDSYVIPQGTTVNGLYSILLRG*SDIRVSKP*NIRF
RPKWAPKNVPKGI*RARGI*T*ASSLWKRGVRTLPLRHPFSVGPRHCLGEQLASMMLFIY
LVSLVRSFEFLPDPKLNGLPDIRSGASGPVFLPKSFNVVAREL*FEYIDNAYN*RSFLHV
LCIY*YD*VTYYTFGTAMSKVFIF*LCLPFDF
>GCiWno822_j06.b1_5
EQE*CTKPXHSW*PLPLPCYTRG*NLFFYKIFSVNAIXPHNRRSRSYNSEETRDAIYKRI
HSRSV*IQDFISSWFTT*NKSSGYIGQLRYTTGNNGKWFIFYLAAWLK*YTRQQAIEHKI
*AKVGPKKCSQRYLTSPRNLNLSVIFMETGSSDAPPTSSLFSWTSSLLRRAASIYDVVYI
FSFTG*EFRISSGS*VKRFTRYKKRCQRPGVFA*KF*CRGSRAVIRVHRQRL*LTFFSTR
FMHILIRLSYILYIWHSHVKSFYFLTMLAF*FX
>GCiWno822_j06.b1_6
*AGIVYETXPLMVAVAVALLYARIKLVFLQNIFS*CHXSPQQEIKKLQF*RNTRCHIQAH
SFTKCIDSGLYFLLVYHIKQVIRLYWTATLYHREQR*MVYILSCCVAEVIYASASHRT*D
LGQSGPQKMFPKVFDEPEEFKPERHLYGNGEFGRSPYVIPFQLDLVTA*ASS*HL*CCLY
I*FHWLGVSNFFRILS*TVYPI*EAVPAARCFCLKVLMSWLESCDSSTSTTLITDVLFYT
FYAYINTIKLHTIHLAQPCQKFLFFNYACLLIX

>sequence 32, 196 3 accessions 1 aa diff between members 43% to 2U1
KLPLFRAFVQEIFRFKTLLPLSIQHRASHDVEIGGYVIPKGTK (0)
VFPNLHAVHHDPNTWENPSDFNIYRHVDKHGKFIPSKKVI
PFGIGARSCLGEKLANVEVFLFLANIIKRF
EILPDPESKELPDFKDGINGFIYVPYRYKVVTKPRIINE*
DEV29724.y1 I-HELIX
DEV55011.y1 I-HELIX
GCiWno527_f20.b1
GCiWno1052_f02.g1
LQW12052.x1  
LQW236803.x1 
LQW32358.x1  
GCiWno667_g03.g1
GCiWno681_i17.g1 CHROMAT_FILE: GCiWno681_i17.g1 PHD_FILE: GCiWno681_i17.g1.phd.1
           CHEM: term DYE: big TIME: Fri Nov  2 13:52:36 2001
           TEMPLATE: GCiWno681_i17 DIRECTION: rev
          Length = 925

 Score =  199 bits (502), Expect = 5e-51
 Identities = 92/95 (96%), Positives = 95/95 (99%)
 Frame = -2

Query: 1   LPRRTISPTMLRRITFYCIFKSNQVFPNLHAVHHDPNTWENPSEFNIYRHVDKHGKFIPS 60
           LPRRTISPTMLRR+TF+CIFKSNQVFPNLHAVHHDPNTWENPS+FNIYRHVDKHGKFIPS
Sbjct: 372 LPRRTISPTMLRRMTFHCIFKSNQVFPNLHAVHHDPNTWENPSDFNIYRHVDKHGKFIPS 193

Query: 61  KKVIPFGIGARSCLGEKLANVEVFLFLANIIKRFE 95
           KKVIPFGIGARSCLGEKLANVEVFLFLANIIKRFE
Sbjct: 192 KKVIPFGIGARSCLGEKLANVEVFLFLANIIKRFE 88

>GCiWno681_i17.g1
ATTGCGAGCTCGGTACCCAACGTAAATAAAACCGTTGATGCCATCTTTAAAGTCCGGAAGCTCTTTGCTCTCAGGATCGG
GAAGAATCTCAAACCTTTTAATGATGTTAGCGAGGAAGAGAAAGACCTCAACATTTGCCAGCTTCTCACCAAGACAAGAT
CGAGCTCCGATTCCGAACGGGATCACTTTCTTAGAGGGAATAAACTTTCCGTGTTTATCAACGTGACGATAAATGTTAAA
ATCGCTCGGATTTTCCCAAGTATTTGGATCGTGGTGTACAGCGTGAAGGTTCGGGAAAACCTGGTTGGATTTAAATATAC
AATGAAATGTCATGCGCCGTAGCATAGTCGGTGATATAGTGCGCCTAGGCAAGACGCTTTAACGGCAATTGCTCCAACCC
AGTGGTCTCTAACGAGTTGTCCAAATTATCAGCCACACAAAAGAAAATCCCCTCAAAAATAATCACCCCCAAAGTAACAT
ATATACTTGGTAACTCGTAATACGAAATGAATGAAACAGAACACCCGTGTTATAACGACTGTTATTTTCCGGCCACGCGA
GGATAAAGTAAATTACATTCATTCACTTCATACTGTTTTAGATCGAAACCAACAACCTTTGTTCCTTTTGGAATGACGTA
ACCTCCAATCTCTACGTCATGACTGGCTCTATGTTGAATTGACAGGGGCAGGAGTGTTTTGAATCGAAATATTTCCTGAA
CAAACGCACGGAATAGTGGAAGCTTGTCTCTGTGGTCGATGCTGGGAACGACTTGTTCACCTTNCACGAANATTTCAAGT
TGGAAAATCAACATCCAGGGAAAATTGTATGGGCAAGTGTGCAAACCAACAGTTTTGACCGGGATAANAAGTGCTACCAT
CTGCTATCCCGTGGCACAGNAAAGGGGTTAAACAGGTAGGCCTAC

>_4
*AYLFNPFXVPRDSRW*HXLSRSKLLVCTLAHTIFPGC*FSNLKXSXKVNKSFPASTTET
SFHYSVRLFRKYFDSKHSCPCQFNIEPVMT*RLEVTSFQKEQRLLVSI*NSMK*MNVIYF
ILAWPENNSRYNTGVLFHSFRITSYQVYMLLWG*LFLRGFSFVWLIIWTTR*RPLGWSNC
R*SVLPRRTISPTMLRRMTFHCIFKSNQVFPNLHAVHHDPNTWENPSDFNIYRHVDKHGK
FIPSKKVIPFGIGARSCLGEKLANVEVFLFLANIIKRFE ILPDPESKELPDFKDGINGFI
YVGYRARN
>_5
VGLPV*PLXCATG*QMVALXIPVKTVGLHTCPYNFPWMLIFQLEXFVXGEQVVPSIDHRD
KLPLFRAFVQEIFRFKTLLPLSIQHRASHDVEIGGYVIPKGTKVVGFDLKQYEVNECNLL
YPRVAGK*QSL*HGCSVSFISYYELPSIYVTLGVIIFEGIFFCVADNLDNSLETTGLEQL
PLKRLA*AHYITDYATAHDISLYI*IQPGFPEPSRCTPRSKYLGKSERF*HLSSR**TRK
VYSL*ESDPVRNRSSILSW*EAGKC*GLSLPR*HH*KV*DSSRS*EQRASGL*RWHQRFY
LRWVPSSQX
>_6
RPTCLTPXLCHGIADGSTXYPGQNCWFAHLPIQFSLDVDFPT*NXRXR*TSRSQHRPQRQ
ASTIPCVCSGNISIQNTPAPVNST*SQS*RRDWRLRHSKRNKGCWFRSKTV*SE*M*FTL
SSRGRKITVVITRVFCFIHFVLRVTKYICYFGGDYF*GDFLLCG**FGQLVRDHWVGAIA
VKASCLGALYHRLCYGA*HFIVYLNPTRFSRTFTLYTTIQILGKIRAILTFIVTLINTES
LFPLRK*SRSESELDLVLVRSWQMLRSFSSSLTSLKGLRFFPILRAKSFRTLKMASTVLF
TLGTELAX


>GCiWno1052_f02.g1
TTCAAGCTCGGTACCCGCAGATATGCGGATATATACACCCTCGACGGCCTCCTAGTACTCGTTACTGGTTCTTGGCTTTC
GTAGCCTGTTTGTAACGTGGAGGAACGCAACTAAAACCGCTGATGCCATTATTAAAGTCCGGAAGCTCTTTGCTCTCAGG
ATCGGGAAGAATCTCAAACCTTTTAATGATGTTAGCGAGGAAGAGGAAGACCTCAACATTTGCCAGCTTCTCACCAAGAC
AAGATCGAGCTCCGATTCCGAACGGGATCACTTTCTTTGAGGGAATAAACTTTCCGTGTTTATCAACGTGACGATAAATG
TTAAAATCGCTCGGATTTTCCCAAGTATTTGGATCGTGGTGTACAGCGTGAAGGTTCGGGAAAACCTGGTTGGATTTAAA
TATACAATCAAATGTCATGCGCCGTAGCATAGTCGGTGATATAGTGCGCCTAGGCAAGACGCTTTAACAGCAATTGCTCC
AACCCAGTGGTCTCTAACGAGTTGTCCAAATTATCAGCCACACAAAAGAAAATCCCCTCAAAAATAATCACCCCCAAAGT
AACATATATACTTGGTAACTCGTAATACGAAATGAATGAAACAGAACACCCGTGTTATAACGACTGTTATTTTCCGGCCA
CGCGAGGATAAAGTANAGTACATTCATTCACTTCATACTGTTTTAGATCGAAACCAACAACCTTTGTTCCTTTTGGAATG
ACGTAACCTCCCATCTCTACGTCATGACTGGCTCTATGTTGAATTGACAGGGGCAGGAGTGTTTTGAATCGAAATATTTC
CTGGACAAACGCACGGAATAGTGGAAGCTTGTCTCTGTGGTCGATGCTGGGAACGACTTGTTCCCCTTCACGAAAATTTC

>GCiWno1052_f02.g1_4
KFS*RGTSRSQHRPQRQASTIPCVCPGNISIQNTPAPVNST*SQS*RRDGRLRHSKRNKG
CWFRSKTV*SE*MYXTLSSRGRKITVVITRVFCFIHFVLRVTKYICYFGGDYF*GDFLLC
G**FGQLVRDHWVGAIAVKASCLGALYHRLCYGA*HLIVYLNPTRFSRTFTLYTTIQILG
KIRAILTFIVTLINTESLFPQRK*SRSESELDLVLVRSWQMLRSSSSSLTSLKGLRFFPI
LRAKSFRTLIMASAVLVAFLHVTNRLRKPRTSNEY*EAVEGVYIRISAGTELE
>GCiWno1052_f02.g1_5
EIFVKGNKSFPASTTETSFHYSVRLSRKYFDSKHSCPCQFNIEPVMT*RWEVTSFQKEQR
LLVSI*NSMK*MNVLYFILAWPENNSRYNTGVLFHSFRITSYQVYMLLWG*LFLRGFSFV
WLIIWTTR*RPLGWSNCC*SVLPRRTISPTMLRRMTFDCIFKSNQVFPNLHAVHHDPNTW
ENPSDFNIYRHVDKHGKFIPSKKVIPFGIGARSCLGEKLANVEVFLFLANIIKRFEILPD
PESKELPDFNNGISGFSCVPPRYKQATKAKNQ*RVLGGRRGCIYPHICGYRA*X
>GCiWno1052_f02.g1_6
NFREGEQVVPSIDHRDKLPLFRAFVQEIFRFKTLLPLSIQHRASHDVEMGGYVIPKGTKV
VGFDLKQYEVNECTXLYPRVAGK*QSL*HGCSVSFISYYELPSIYVTLGVIIFEGIFFCV
ADNLDNSLETTGLEQLLLKRLA*AHYITDYATAHDI*LYI*IQPGFPEPSRCTPRSKYLG
KSERF*HLSSR**TRKVYSLKESDPVRNRSSILSW*EAGKC*GLPLPR*HH*KV*DSSRS
*EQRASGL**WHQRF*LRSSTLQTGYESQEPVTSTRRPSRVYISAYLRVPSLX

>GCiWno527_f20.b1
TAACGAGTTGTCCAAATTATTCAGCCCACAAAAGAAAATCCCCTCAAAAATAATCACCCCCAAAGTAACATATATACTTG
GTAACTCGTAATACGAAATGAATGAAACAGAACACCCGTGTTATAACGACTGTTATTTTCCGGGCACGCGAGGATAAAGT
AAATTACATTCATTCACTTCATACTGTTTTAGATCGAAACCAACAACCTTTGTTCCTTTTGGAATGACGTAACCTCCAAT
CTCTACGTCATGACTGGCTCTATGTTGAATTGACAGGGGCAGGAGTGTTTTGAATCGAAATATTTCCTGAACAAACGCAC
GGAATAGTGGAAGCTTGTCTCTGTGGTCGATGCTGGGAACGACTTGTTCACCTTCAACGAAAATTTCAAGTTGGAAAATC
AACGTCCAGGAAAATTGTATGGCAAGTGTGCAAACAAAGGCAAATTCTATTTGCTAGGTTCAGGACTATAGACATCTGTT
TATGACAAAGCGCGCAATGAGAAAGCAGTTTTATAGAAAATATACTGTCTAACTTAAGTTAACTGAATTAATTTTAGAAT
TGGGACATGGAAGTCTGGTGATAATAGTTACCCTACCAATATTATCGATTAGTTCTTGGTGAATTTCCTCTTGTATATTG
GGATAATGTATTAACGCCAATAGCGACCAGAGTATTGCGTTAGTGCTTGTCTCTGTACAGCGATGAAAAAGTCCACCAAG
CAATGTCGTAGCTCCGTCTCCTTGAAATACAATTTACCGTATAGCATTTTTGTTCGATAAGNTTAATGGGTTTCATATAA
TATAGNNAGGTGGAGGGACACCTTTANGACATTATTTACACACTAAGTTACATACTTGGGTAACCCGTAAGCTGGCCCAA
AAATGGGTG

>GCiWno527_f20.b1_4
THFWASLRVTQVCNLVCK*CXKGVPPPXYII*NPLXLSNKNAIR*IVFQGDGATTLLGGL
FHRCTETSTNAILWSLLALIHYPNIQEEIHQELIDNIG RVTIITRLPCPNSKINSVNLS*
TVYFL*NCFLIARFVINRCL*S*T*QIEFAFVCTLAIQFSWTLIFQLEIFVEGEQVVPSI
DHRDKLPLFRAFVQEIFRFKTLLPLSIQHRASHDVEIGGYVIPKGTKVVGFDLKQYEVNE
CNLLYPRVPGK*QSL*HGCSVSFISYYELPSIYVTLGVIIFEGIFFCGLNNLDNSL
>GCiWno527_f20.b1_5
HPFLGQLTGYPSM*LSV*IMS*RCPSTXLYYMKPIXLIEQKCYTVNCISRRRSYDIAWWT
FSSLYRDKH*RNTLVAIGVNTLSQYTRGNSPRTNR*YW*GNYYHQTSMSQF*N*FS*LKL
DSIFSIKLLSHCALCHKQMSIVLNLANRICLCLHTCHTIFLDVDFPT*NFR*R*TSRSQH
RPQRQASTIPCVCSGNISIQNTPAPVNST*SQS*RRDWRLRHSKRNKGCWFRSKTV*SE*
M*FTLSSRARKITVVITRVFCFIHFVLRVTKYICYFGGDYF*GDFLLWAE*FGQLVX
>GCiWno527_f20.b1_6
PIFGPAYGLPKYVT*CVNNVXKVSLHLXILYETH*XYRTKMLYGKLYFKETELRHCLVDF
FIAVQRQALTQYSGRYWR*YIIPIYKRKFTKN*SIILVG*LLSPDFHVPILKLIQLT*VR
QYIFYKTAFSLRALS*TDVYSPEPSK*NLPLFAHLPYNFPGR*FSNLKFSLKVNKSFPAS
TTETSFHYSVRLFRKYFDSKHSCPCQFNIEPVMT*RLEVTSFQKEQRLLVSI*NSMK*MN
VIYFILACPENNSRYNTGVLFHSFRITSYQVYMLLWG*LFLRGFSFVG*IIWTTRX


>sequence 33 1 accession 42% to 1A2 similar to seq 24
EESLRVCVADLFYAGTETSTSTILWGMIALINYPEIQEKLHKEIVNATG (1?)
EEFPRLGHKDELPLLQAFIQELYRCMTLIPLGIQHQTTKNVDICGYCIPKDTV (0?)
VFTNIHAVHHDPNIWKNPSEFNIYRHIDEEGKFI
PSRKVIPFGIGCRSCLGEKLARIEIFLFLANIIKRF 
EVRPDPDSEPLLPIDDGITGFGFLPFLFKAVVLPRTNKGTQ*
LQW72992.y1

LQW156142.y1 
LQW156142.y1.phd.1 LQW156142.x1 

           12:28:22 2001 TEMPLATE: LQW156142 DIRECTION: rev
          Length = 881

 Score = 59.7 bits (142), Expect = 9e-09
 Identities = 32/49 (65%), Positives = 33/49 (67%)
 Frame = -1

Query: 25  VCCYPAYRNIRNGSFSKNSSFFH*LFVWDRKGVIRLMGFNGRLFLIKNP 73
           +CC PAYRNIRN   SK    F       RKGVIRLMGFNGRLFLIK P
Sbjct: 791 LCC*PAYRNIRNDLSSKIVVLFTNSSSGIRKGVIRLMGFNGRLFLIKKP 645

 Score = 41.4 bits (95), Expect = 0.003
 Identities = 33/88 (37%), Positives = 45/88 (50%), Gaps = 4/88 (4%)
 Frame = -3

Query: 9   TYVM-HE*HLCN--MTDICVCCYPAYRNIRNGSFSKNSSFFH*LFVWDRKGVIRLMGFNG 65
           TY++ HE*H     ++ + + C P Y      SF  NSSF H*LFVWD +   ++ G   
Sbjct: 840 TYIVRHE*H*VT*LISVMLLTCIP*Y*K*---SFK*NSSFIH*LFVWDPERRYQVNGI*W 670

Query: 66  RLFLIKNPIL-M*FLSGIYDIHAVHHDP 92
           ++   K       F     +IHAVHHDP
Sbjct: 669 KIISNKKTQF*CNFYQVFTNIHAVHHDP 586

>LQW156142.y1
>lcl|LQW156142.y1 CHROMAT_FILE: LQW156142.y1 PHD_FILE: LQW156142.y1.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 12:28:22 2001 TEMPLATE: LQW156142 DIRECTION: rev 
AAGTCGGACCGAAATTGATCTTGGTATTTTACTAAAACAGCATTTGCCGAGGGTTAGCAACTAATCTTTATATATACATT

GTTTATTTGAGATATGGATTTATTTATACAGTGCAATATGTGGAAGGTTACTTAAATAATGTATTAAATAATAAATGAAG

ATGACACGATAACACTGAACTTTATCTGCTGTTCATGAATCTCCCTGTAAAAGATATAGTAAAACAAGTTAATTAAGGAA

AAATGTACTAAATGCTACCATAATTTTTAAACACCTTGGGTATTATTACTGAGTTCCTTTATTTGTACGTGGAAGAACCA

CAGCTTTGAAGAGAAAGGGCAAAAAACCAAAACCAGTGATTCCATCGTCTATTGGAAGAAGAGGTTCGCTATCAGGATCA

GGACGGACCTCGAACCTTTTGATGATGTTGGCAAGGAAGAGGAAAATCTCAATTCTTGCTAACTTCTCACCAAGACAGGA

TCTGCATCCGATTCCAAACGGAATCACTTTTCTGGAAGGAATGAACTTTCCCTCTTCGTCGATATGGCGATAAATGTTGA

ACTCGCTCGGATTTTTCCAGATATTTGGATCGTGGTGCACAGCGTGGATGTTCGTAAATACCTGATAAAAATTACATCAA

AATTGGGTTTTTTTATTAGAAATAATCTTCCATTAAATCCCATTAACCTGATAACGCCTTTCCGGATCCCAGACGAAGAG

TTAGTGAATAAAACTACTATTTTACTTGAAAGATCATTTCTAATATTACGGTATGCAGGTTAGCAGCATAACAGATATCA

GTCATGTTACTTAATGTCACTCATGCCTAACTATGTATGTTTACTGGCCCTGGATCTTGGGTTACGGTCCCCACTTCCCA

T

>_4
GKWGP*PKIQGQ*TYIVRHE*H*VT*LISVMLLTCIP*Y*K*SFK*NSSFIH*LFVWDPE
RRYQVNGI*WKIISNKKTQF*CNFYQVFTNIHAVHHDPNIWKNPSEFNIYRHIDEEGKFI
PSRKVIPFGIGCRSCLGEKLARIEIFLFLANIIKRFEVRPDPDSEPLLPIDDGITGFGFL
PFLFKAVVLPRTNKGTQ**YPRCLKIMVAFSTFFLN*LVLLYLLQGDS*TADKVQCYRVI
FIYYLIHYLSNLPHIALYK*IHISNKQCIYKD*LLTLGKCCFSKIPRSISVRL
>_5
WEVGTVTQDPGPVNIHS*A*VTLSNMTDICYAANLHTVILEMIFQVK**FYSLTLRLGSG
KALSG*WDLMEDYF**KNPILM*FLSGIYEHPRCAPRSKYLEKSERVQHLSPYRRRGKVH
SFQKSDSVWNRMQILSW*EVSKN*DFPLPCQHHQKVRGPS*S**RTSSSNRRWNHWFWFF
ALSLQSCGSSTYK*RNSVIIPKVFKNYGSI*YIFP*LTCFTISFTGRFMNSR*SSVLSCH
LHLLFNTLFK*PSTYCTV*INPYLK*TMYI*RLVANPRQMLF**NTKINFGPTX
>_6
MGSGDRNPRSRASKHT*LGMSDIK*HD*YLLCC*PAYRNIRNDLSSKIVVLFTNSSSGIR
KGVIRLMGFNGRLFLIKKPNFDVIFIRYLRTSTLCTTIQISGKIRASSTFIAISTKRESS
FLPEK*FRLESDADPVLVRS*QELRFSSSLPTSSKGSRSVLILIANLFFQ*TMESLVLVF
CPFSSKLWFFHVQIKELSNNTQGV*KLW*HLVHFSLINLFYYIFYREIHEQQIKFSVIVS
SSFII*YII*VTFHILHCINKSISQINNVYIKISC*PSANAVLVKYQDQFRSDX

>sequence 36, 82 7 accessions + 4 ESTs LOW 30% RANGE TO 2 FAMILY MEMBERS, NO INTRONS
MASVLTVVGDYLNIWSIVLGGSA
LIFYMWSRKGNLPPGPRGYPILGAMPYLVVHPEKVITKWSREIYGPILSVPLL
NRTIIYLNTYEAITEAFSKQGLKLAGRPYMFLFQQISSDLGITMKTYSEHFKVQRQFGMR
SLKPSRIESLVIQESRYFIDQLHDQVGKVYDMKTDVYNFT
ANIICSVVLGKRFDYDDPAFKLILESSEKALGEPEDANLMMAMILIPQLRFLP
PFHGANQRFLKNQHRILSMLLGIIEEHQKNFDPNNVEDFIDAYIYEQKFGIGK 
NTKLFENDQLKVYVRDLFIAGVETTSNTIQWSILALLYNPK
YMDLMYNEVYEALGSDGVPCMKDREKMPVTCAFIQEIMRFRTITPGAAPHSAMEDIKLNGYDIPSGT 
MVVANLWALHNDPDTWPEPEQFNPHRHIDSD 
GKFIHSPKILPFSIGPRYCMGEGIAKAEIFIFLTSLLQKFTV 
SRDPNAVYPEEIEQGIVSAMSCPHRYNIILTAR*
AV674064 EST
AV973178 EST 
AV954996 EST
BP000374 EST
LQW235283.x1 
LQW280554.x1 
LQW66533.x1  
LQW69562.x1
LQW99623.y1
LQW255433.y1
LQW192402.y1 I-HELIX
LQW180741.y1

SEQUENCE 82 90% TO SEQ 36 probably SAME GENE 36% TO 2J2
IEEHQKNFDPNNVEDFIDAYIYEQKFGIGKNTKLFENDQLKVYVRDLFIAGVETTS 230
NTIQWSILALLYNPKYMDLMYNEVYEALGSDGVPCMKDREKMPVTCAFIQEIMRFRTLNP 410
GAAPHSALEDIKLNGYDIPSGPMVVATLWALLIDPDTWPKPNTSNPQRHLAPDGKF 579


Savignyi ortholog to seq 36 78%
>scf/ciona01/G126/seq_dir/hrs/G126P68595F.T0/G126P68595FC9.T0.seq   1012 file 8
            1012  ABI
            Length = 1012

682 WPEPEKFDPRRHLDSDGKFVHSPKILPFSIGPRYCMGEGIAKTEIFIFLVSLLQKFTIS 506
505 RDPDSFYPDEMDEGIVAALSIPNRYNIIL 419

>sequence 40, 19  6 accessions 41% to 1A1
RNCLAKKSAAFAGRPPFETSKLIEEGLSISFSNYRYLP

TVIYSTTSVSSTICFGRSFTRQDPELKEFLRNFQSFDKAMGASQIINFWPFLKYFP 197-251

NLKTYMDQYWNFTLSMLEQHWDTYVPNNMRDLADCLWAQSNQVN
NRQLTDQQRRIAYGASDAFGAGFDTISAMITWSIFYMAVFPEHQRK (0?)
IREEIDRLETSMFSLRHHGDVCPYTQAWLYEVLRHISVSPLLVPHYTVKQVEVNGTMIPAGVV
YNLLLIQADRDTRVWENPEQFEPERFLARDPTTGGARVVASETSKILNWGAGKRRCPGAELSRH 376
ELFIYNANLVKLCYIEQAVEGIEPAIPWPCTPGISTKPKAFRVKVTQR*
DEV43978.y1 100-137 region and upstream
LQW228305.x1 I-helix and upstream opp end = region from 100-137
LQW134624.x1  I-helix opp end no match
LQW265875.x1 I-helix opp end poor match to KYG region may be accidental
DEV5010.x1 I-helix opp end = region from 100-137
DEV21957.y1 region from 197-251
LQW240272.y1 region from 197-251
DEV57431.x1 I-helix 
DEV57431.y2 100-137 region
LQW199164.x1 IREE to PKG exon opp end no match
LQW48549.y1 PKG exon to perf opp end no match
LQW141143.y1 perf opp end no match
LQW17354.x1 perf to end opp end missing
LQW184853.y1 perf to end opp end no match
LQW17354.x2 perf to end opp end missing
LQW172304.x1 PKG and perf to end opp end no match
DEV12172.x1 perf to end opp end = seq 88
LQW207894.y1 perf to end opp end no match
LQW184853.y1 perf to heme opp end no match
GCiWno832_l19.b1
GCiWno834_j23.b1
GCiWno780_l12.g1
GCiWno777_c20.g1
GCiWno38_g15.b1
GCiWno834_j23.b1 PERF to end = seq 40

>scf/ciona01/G126/seq_dir/hrs/G126P66733F.T0/G126P66733FC7.T0.seq    705      0
            705  ABI
            Length = 705

  Plus Strand HSPs:

 Score = 148 (52.1 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 23/41 (56%), Positives = 32/41 (78%), Frame = +1

Query:     1 NLKTYMDQYWNFTLSMLEQHWDTYVPNNMRDLADCLWAQSN 41
             NLK +MD +W+F    L++HW TY P+N+RD+ADCLW QS+
Sbjct:   166 NLKAHMDVFWDFVFPNLKEHWKTYNPSNIRDIADCLWYQSH 288

>scf/ciona01/G126/seq_dir/hrs/G126P66933R.T0/G126P66933RD3.T0.seq    721      0
            721  ABI
            Length = 721

  Plus Strand HSPs:
exon 5 ortholog?
 Score = 180 (63.4 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 32/55 (58%), Positives = 45/55 (81%), Frame = +3

Query:     2 VIYSTTSVSSTICFGRSFTRQDPELKEFLRNFQSFDKAMGASQIINFWPFLKYFP 56
             V +S T+V S ICFGRSF++ DPEL++F+   ++FD+AMG++QI+NFWPFLK  P
Sbjct:   285 VHHSATNVISNICFGRSFSKNDPELQKFVSINRAFDRAMGSAQIVNFWPFLKSVP 449

>scf/ciona01/G126/seq_dir/hrs/G126P66933R.T0/G126P66933RD3.T0.seq_3 721 0    721  ABI
ICAEPFCGFADRIKLPGRGVKTETRCQFGPIALL*GVFIF*VLFKGLLLIISLHHLY*LS
SNINDFGDERITLRIKPRTNIFHIQDAITNPDEIVHHSATNVISNICFGRSFSKNDPELQ
KFVSINRAFDRAMGSAQIVNFWPFLKSVPVLGRSYQVIPN*QNKNQCTQ*NVFNTFYGFK
GIL*YRHLCHIIS*YWTIAVFCVE*NTVKLNNLGVGWSVKSLAPYYYYNAQTHHTISIN

>scf/ciona01/G126/seq_dir/hrs/G126P67000R.T0/G126P67000RF11.T0.seq_4 812 0    812  ABI
QVGPPYEQSKLFSNGF*LGIQPITRYYICIFLGR*KTAFIVITDSGNILLTDPSYEEQIM
GCIVKPNRNYNMLNLKIRNRSKWFLTTRTEE*TTTVSDYXIGFS*I*NLTLIKDWYCFV*
PSTLSLIQHQTL*YVFFTELSC*PMMSSLQNWYIKRLHNRFFPIINIPISF NHSPAWEKQ
KRCTVKALKLYTAGPDLQKRNAMEDTASYQANLLVDQLLASVNKVSNNFYPMSRQKKNKD
RF*NGNH*TKQLADKEIKLEXKTWSFSVKL
>scf/ciona01/G126/seq_dir/hrs/G126P67000R.T0/G126P67000RF11.T0.seq_5 812 0    812  ABI
AGGPPL*TIKTF*QRVLAWHSTNYEVLYLYLFGAVKNCFYSHY*FGQHFINGPKL*GTNN
GMHS*TKQKL*HVEFENKK*IKMVPYYANGRIDDYSQ*LXYWLLLNLKSYPY*RLVLFCV
TKHFKPYTTPNSLICFFY*TKLLTYDELVTKLVY*AATQPFFSNY*HSNFLQSQSGVGKA
KEMHSEGSQTVHGWTGLTETKCDGRHCILPSKSPCRSIACIG**G***LLPYESTKKK*R
*VLKW*SLNQTTGR*GNKTGXQNMEFQRQIX
>scf/ciona01/G126/seq_dir/hrs/G126P67000R.T0/G126P67000RF11.T0.seq_6 812 0    812  ABI
GRWAPLMNNQNFLATGFSLAFNQLRGIIFVSFWGGEKLLL*SLLIRATFY*RTQVMRNK*
WDA*LNQTEIITC*I*K*EIDQNGSLLRERKNRRLQSVTIXLASPEFEILPLLKTGTVLC
NQAL*ALYNTKLFNMFFLLN*VANL**ARYKIGILSGYTTVFFQLLTFQFPSITVRRGKS
KRDAQ*RLSNCTRLDRTYRNEMRWKTLHPTKQISL*INCLHRLIRLVITFTL*VDKKKIK
IGFKMVIIEPNNWQIRK*NWXPKHGVSASNX

>scf/ciona01/G126/seq_dir/hrs/G126P612892F.T0/G126P612892FH1.T0.seq_1 727 0    727  ABI
LNIALWWNSCVSLF*VKYEGNKNRNNATNVRCNVIVNRSNLKKIFLQKCIFAM*FGKN**
H*FL*LFRTALVKHSVAFAGRPPYETSKLFSNGLSLAFNNYR*YICILLRVEKLL**SLL exon 3
IRATIY*TNQSYEEQIMGCIVKPTEL*HVEI*NKK*IKNVPYYANGRIDDYSQ*LFYWLL
LNLKSYPY*RLVLFCVTKHFKPYTTPTL*YVFFTELSC*PMMSSLQNWYIKRLHNRFFPL
LTX
>scf/ciona01/G126/seq_dir/hrs/G126P612892F.T0/G126P612892FH1.T0.seq_2 727 0    727  ABI
*ISPCGGIPVSLYFR*NMKEIKTETMQLMFGVM***TGQTLRRYFYKNVFLLCDLEKTDN
INFCNCLEPPW*STR*RSQVDHLMKHQNSLATVLAWHSTITGNIFVSCCALKNCSNSHY*
FGQQFIKRTKVMKNK*WDA*LNQQNYNMLKFEIRNRSKMFLTTRTEE*TTTVSDYFIGFS
*I*NLTLIKDWYCFV*PSTLSLIQHQLFNMFFLLN*VANL**ARYKIGILSGYTTVFFHY
*H
>scf/ciona01/G126/seq_dir/hrs/G126P612892F.T0/G126P612892FH1.T0.seq_3 727 0    727  ABI
EYRPVVEFLCLFILGKI*RK*KQKQCN*CSV*CDSKQVKP*EDIFTKMYFCYVIWKKLIT
LIFVTV*NRPGKALGSVRRSTTL*NIKTL*QRS*LGIQQLQVIYLYLVAR*KTALIVITD
SGNNLLNEPKL*RTNNGMHS*TNRIITC*NLK*EIDQKCSLLRERKNRRLQSVTILLASP
EFEILPLLKTGTVLCNQAL*ALYNTNSLICFFY*TKLLTYDELVTKLVY*AATQPFFSII
N

>scf/ciona01/G126/seq_dir/hrs/G126P604921F.T0/G126P604921FC9.T0.seq_1 737 0    737  ABI
MRYCSSPCGGNSDTASYQANLLVDQLLASVNKVSNNFYPMSRQKKNKDRF*NGNH*TKQL
ADKEIKLPGKGGKNRNSMSIWSYCFTLGCVYFLGSF*GAFAHHKFTSLVLIK**HQRFWG
*TNNFKNQTPN*YFPHPGRNHESGRNSSSQCNQRHFKHLFRPVIQQERPGTPKICIH*SS
V*PCDGICTNR*LLAFSKICTSLGGDPTR*FRINKTKINVLSETYXNTFYGFEGIL*YRH
LCHIIS
>scf/ciona01/G126/seq_dir/hrs/G126P604921F.T0/G126P604921FC9.T0.seq_2 737 0    737  ABI
CDTVHRPVVXIQTLHPTKQISL*INCLHRLIRLVITFTL*VDKKKIKIGFKMVIIEPNNW
QIRK*NCQERGVKTETRCQFGPIALL*GVFIF*VLFKGLLLIISLHHLY*LSSNINDFGD
ERITLRIKPRTNIFHIQDAITNPDEIVHHSATNVISNICFGRSFSKNDPELQKFVSINRA
FDRAMGSAQIVNFWPFLKSVPVLGEILPGNSELTKQKSMYSVKRIXTHFMGLKEYYNTDI
CVILSX
>scf/ciona01/G126/seq_dir/hrs/G126P604921F.T0/G126P604921FC9.T0.seq_3 737 0    737  ABI
AILFIALWWXFRHCILPSKSPCRSIACIG**G***LLPYESTKKK*R*VLKW*SLNQTTG
R*GNKTARKGG*KQKLDVNLVLLLYFRVCLFFRFFLRGFCSS*VYITCTN*VVTSTILGM
NE*L*ESNPELIFSTSRTQSRIRTK*FITVQPTSFQTFVSAGHSARTTRNSKNLYPLIER
LTVRWDLHKSLTSGLF*NLYQSWGRSYQVIPN*QNKNQCTQ*NVX*HILWV*RNIIIQTF
VSYYL



>LQW265875.x1_1
RNGRQL*ICYVTIVITSVVHRNLIFV*NLKTYMDQYWNFTLSMLEQHWDTYVPNNMRDLA
DCLWAQSN QVNSNGTAPRHTANGATDELKPRHAMNGANGNGMTHHNTNGDVTHSNGINGE
PPTKINRQLTDQQRRIAYGASDAFGAGFDTISAMITWSIFYMAVFPEHQRKVICIK*LST
YISSHYVNGELILASNNIVGRAKMGHPNILFSRTILLLTKNIQVILKYFSGSYKLCNCLT
RSAYSARFRFTNLFNEYAYYRKMNISIVVLVTGLK*TF*PKGCNRTVIFTRTVRV*GVTV
AGVMCLVLLMILRAGGL
>LQW265875.x1_2
ETAGSFKYVTSLLLLRPLFIEI*YLFRISKPTWTSIGTLRCLCWNNTGTLTCPTI*ETWQ
IVCGPKATRLTAMARRHATQQMAPQTS*SHATQ*MVPTVMV*HITIRMVTSHIATGLTGN
PLPR*TVN*RINSAV*RMAQATHSAQVSTL*AL*SRGRFSTWPFFLNTNER*FALNDYLR
IFPHIMLMAN*F*LRII**VARRWDTLTFCFLVPFCC*QRTYK*S*NISQDLINFVIV*P
DRHIVLGFDLPTYLMNMHTIGR*ILVLSSWSQD*NKRFNQRDVIER*YSQEQLEYKE*Q*
QVLCVWCY**YFVLEG
>LQW265875.x1_3
KRQAALNMLRHYCYYVRCS*KFNICLESQNLHGPVLELYVVYVGTTLGHLRAQQYERLGR
LSVGPKQPG*QQWHGATPHSKWRHRRVEATPRNEWCQR*WYDTSQYEW*RHT*QRD*RGT
PYQDKPSTNGSTAPYSVWRKRRIRRRFRHYKRYDHVVDFLHGRFS*TPTKGNLH*MIIYV
YFLTLC*WRIDFSFE*YSRSREDGTP*HSVFSYHFVVNKEHTSNLKIFLRIL*TL*LFNP
IGI*C*VSIYQPI**ICILSEDEY*YCRLGHRIEINVLTKGM**NGNIHKNS*SIRSDSS
RCYVFGVIDDTSCWRV

>LQW265875.x1
>lcl|LQW265875.x1 CHROMAT_FILE: LQW265875.x1 PHD_FILE: LQW265875.x1.phd.1 CHEM: term DYE: ET TIME: Fri Aug 31 13:01:22 2001 TEMPLATE: LQW265875 DIRECTION: fwd
AGAAACGGCAGGCAGCTTTAAATATGTTACGTCACTATTGTTATTACGTCCGTTGTTCATAGAAATTTAATATTTGTTTA
GAATCTCAAAACCTACATGGACCAGTATTGGAACTTTACGTTGTCTATGTTGGAACAACACTGGGACACTTACGTGCCCA
ACAATATGAGAGACTTGGCAGATTGTCTGTGGGCCCAAAGCAACCAGGTTAACAGCAATGGCACGGCGCCACGCCACACA
GCAAATGGCGCCACAGACGAGTTGAAGCCACGCCACGCAATGAATGGTGCCAACGGTAATGGTATGACACATCACAATAC
GAATGGTGACGTCACACATAGCAACGGGATTAACGGGGAACCCCCTACCAAGATAAACCGTCAACTAACGGATCAACAGC
GCCGTATAGCGTATGGCGCAAGCGACGCATTCGGCGCAGGTTTCGACACTATAAGCGCTATGATCACGTGGTCGATTTTC
TACATGGCCGTTTTTCCTGAACACCAACGAAAGGTAATTTGCATTAAATGATTATCTACGTATATTTCCTCACATTATGT
TAATGGCGAATTGATTTTAGCTTCGAATAATATAGTAGGTCGCGCGAAGATGGGACACCCTAACATTCTGTTTTCTCGTA
CCATTTTGTTGTTAACAAAGAACATACAAGTAATCTTAAAATATTTCTCAGGATCTTATAAACTTTGTAATTGTTTAACC
CGATCGGCATATAGTGCTAGGTTTCGATTTACCAACCTATTTAATGAATATGCATACTATCGGAAGATGAATATTAGTAT
TGTCGTCTTGGTCACAGGATTGAAATAAACGTTTTAACCAAAGGGATGTAATAGAACGGTAATATTCACAAGAACAGTTA
GAGTATAAGGAGTGACAGTAGCAGGTGTTATGTGTTTGGTGTTATTGATGATACTTCGTGCTGGAGGGTTG

>DEV57431.y2_1
VPNCLPKKSAAFAGRLPSKHPS*SKKDSVLVSVIIGIYL*LGSKHEVYKCTMCAWCKSRH
PCYNSTVGMRCMNTPCVSGV*EDTHVIT*Q*A*GV*IHHVCLVYKKTPML*LDSEHEVYE
YTMCVWCIRRHPCYN*TVSMRCMNTPCVSGV*EDTHVIT*QWA*GV*IHHVCLVYKKTPM
L*LDSEHEVYEYTMCVWCIRRHPCL*LDSEH*VYEYTMCVWCISRHPCYNLTVSTRCMNM
L*PX
>DEV57431.y2_2
YQTASRKNPPRLLEDSLRNIQVDRRRTQY*FQ*L*VFTFD*AVSMRCINALCVPGVKVDT
HVITRQWA*GV*IHHVCLVYKKTPML*LDSEHEVYEYTMCVWCIRRHPCYNLTVSMRCMN
TPCVSGV*EDTHVITRQ*A*GV*IHHVCLVYKKTPML*LDSGHEVYEYTMCVWCIRRHPC
YNLTVSMRCMNTPCVSGV*EDTHVYNSTVSIRCMNTPCVSGV*VDTHVIT*Q*ARGV*IC
YNPX
>DEV57431.y2_3
TKLPPEKIRRVCWKTPFETSKLIEEGLSISFSNYRYLPLIRQ*A*GV*MHYVCLV*K*TP
ML*LDSGHEVYEYTMCVWCIRRHPCYNLTVSMRCMNTPCVSGV*EDTHVIT*Q*A*GV*I
HHVCLVYKKTPML*LDSEHEVYEYTMCVWCIRRHPCYNLTVGMRCMNTPCVSGV*EDTHV
IT*Q*A*GV*IHHVCLVYKKTPMFITRQ*ALGV*IHHVCLVYK*TPML*LDSEHEVYEYV
ITR

>LQW240272.y1_1
KGDITEPGPARFVYRLIVLLWRMIHLAVIM*LIYPIRGG*RQSL*HRCMNMI*NSPKTIT
HKVTYVVTGRPKRARGL*NRTPVL*QLSLPRHARINKLHTW*LVSEHEVYETEHPC*RLS
LSHHAGIHNLNNFNYIDFQGLVGDLHDTVIYSTTSVSSTICFGRSFTRQDPELKEFLRNF
QSFDKAMGASQIINFWPFLKYFPVLGKSFRVISHNLYSRMGEDGTLF*SIYSYILVVNKE
HSKNDKTCSVTFIDRCNCLKTIRI*ILEQRCHFPKX*MVTRR*IYMKDKYNGQQRKRARR
DEKKEKKDQGKK*QEHKKKQRRNEKPX
>LQW240272.y1_2
KEI*LSLVRRDLYIDLLFYFGG*FIWL**CNLFILYVAGNDSPYNTGA*I*YKILPKQ*P
TK*HTW*LVGLSGHEVYETEHPCYNNCRCPVMRG*INYIRGNL*VSTRCMKQNTRVNDCR
YPTTREYTT*TTLITLISRV**ATSTTR*YTAPPA*VPRFVSGEVLQGKTRS*KNFSEIF
KVSTKPWARLRLSTFGHF*NTFRCWESPFG*FPIIYIVGWGKMGHFFNLYTRTFW**IKN
IQRMIKLVL*LS*TVVIV*KRSGFKY*SKGVIFPSXKW*QGGEFT*RTNITGNSANGHGE
TRKKKKRTRGKNSKNTKKNKEEMKNH
>LQW240272.y1_3
RRYN*AWSGEICI*TYCFTLADDSFGCNNVTYLSYTWRVTTVLITQVHEYDIKFSQNNNP
QSNIRGNW*A*AGTRFMKQNTRVITTVVAPSCEDK*ITYVVTCK*ARGV*NRTPVLTTVV
IPPRGNTQLKQL*LH*FPGFSRRPPRHGDIQHHQREFHDLFRAKFYKARPGVERISQKFS
KFRQSHGRVSDYQLLAIFKILSGAGKVLSGNFP*FI**DGGRWDTFLIYILVHFGSK*RT
FKE**NLFCDFHRPL*LFKNDQDLNIRAKVSFSQAXNGDKEVNLHEGQI*RATAQTGTAR
REKRKKGPGEKIARTQKKTKKK*KT

>LQW176855.y1_4
FLFFFLYFFLLFFLFFIFLKRSLSKKKNNLLYLSPFDPFCYILYIPLFVFSLFFLVVSAI
PITLLSVYITLYGSAFVYKSLFCFVQLS*IC*KFYLPHVHMFIYIYIYIVCLV*KS**SE
INIVWLIEIL*FGIEKVKNY*HHGFKSFLLNCGLHVHYGT*DFDRSWFLTLNHGAFYSMC
SHSNAIA*LHNKLNWA*EGFLIRR*ARL*Y*KNYFIRFRFILFSIRN*SFQT*IARSIQF
SETYPLSYANHTSLSVFLFLSSLAVYV*CCSEI*GQRKVIEKFV*SSTHAA*WQGCN*VL
INLLPRVVAAGHLRRNFCLIRF*GSEGNQNYWVLWWLFKVEYEVWYQLSYS
>LQW176855.y1_5
LSFFLSLFLSSFLSIFYFS*EKSKQKKK*LTIFVTFRSLLLYFIYSAFRFFSVFLSCFSH
SNHFTVCLHYTLWFCVRL*IFILFRPIELNMLKVLSPPRSYVYIYIYIYSMFSLKKLIIR
N*HCMVNRNFIIWN*KG*ELLTPWF*ILFVKLWASCSLWDLRFRPELVPYPKSWRVLFYV
FPQ*RHSIIA**T*LGLRRFFDKALSKAIVLKELFYQV*VYIIFDKKLIVPN MNCEEHSI
LGNLSTQLCKPHVVVGFSIFIFACSLRVMLQRNMRSTKGNRKVRMKFNSRRIMARLQLSS
YQFAAACCCGWAFTPEFLFDTFLRE*RESKLLGFVVAV*SRI*SLVPAQLFX
>LQW176855.y1_6
SFFFSFFISFFFSFYFLFFLREV*AKKKITYYICHLSIPFVIFYIFRFSFFLCFS*LFQP
FQSLYCLFTLHFMVLRSFINLYFVSSN*VKYVKSFISPTFICLYIYIYI*YV*FKKVNNP
KLTLYG**KFYNLELKRLRITDTMVLNPFC*TVGFMFTMGLEISTGVGSLP*IMARSILC
VPTVTP*HNCIINLIGPEKVF**GVKQGYSIKRIILSGLGLYYFR*ETDRSKHELRGAFN
SRKLIHSAMQTTRRCRFFYFYLRLQFTCDAAAKYEVNER**KSSYEVQLTPHNGKAAIKF
LSICCRVLLRLGIYAGIFV*YVSKGVKGIKTTGFCGGCLKSNMKFGTSSVIP

>LQW273267.y1_4
SIYLWTPCLDPSQPFSQPF*FANL*LQHFKFSVV*FQNDRQHMQASSRPIPTYHPTRVVF
IYLRFSYVYAPRI*VNESNRKFV*XQLTPHNGKXAIXFLSICSRVLLRLGIYAGIFV*YV
SKGVKGIKTTGFCGGCLKSNMKFVLKRVNLNFCH MWLALVSNSLVTNSRLHAATIVGVHA
LGQGTKR*KLQPSGR**VVQIVSHPLKNVLTKWHLFHLNVDLISGR**HETYDVLGTTLS
KGITHHWEYSPDGEFPARETDRMVKTIRGFLSNQDGAL*RVGCKWARKHQVKWARSV*SP
TKLHTW*LISDMRYMKQTPCYNNCRAPHARK*VQVPSRFFXI
>LQW273267.y1_5
HIPMDPLFRSVPTLFATILICQFIATAL*IFRSIISKRSSTYAGIISTYPYIPPHSCRFH
LSSLQLRVCAANMSQRK**KVRMXSTHAA*WQXCNKXLINLLPRVVASGHLRRNFCLIRF
*GSEGNQNYWVLWWLFKVEYEVCFKAG*FKFLSHVVGARF*LTGDEFEAPCCYHCGCTCP
WARH*TVKAPTQWSLMSCPNCQPSIKKRLNQMASVSFKR*FNFWQVITRDL*RFGNYPIQ
GDYPSLGIFTRWGISRT*N*QNGQNNSGIFIESRWGVMTRWL*MGTKTSGKMGTFGLITH
KVTYVVTHKRHEVYETDTVL*QLSCPTREEISTGTESILLXX
>LQW273267.y1_6
PYTYGPLV*IRPNPFRNHSNLPIYSYSTLNFP*YNFKTIVNICRHHLDLSLHTTPLVSFS
SIFASVTCMRREYESTKVIESSYEXNSRRIMAXLQ*XSYQFAPACCCVWAFTPEFLFDTF
LRE*RESKLLGFVVAV*SRI*SLF*SGLI*ISVTCGWRSFLTHW*RIRGSMLLPLWVYMP
LGKALNGKSSNPVVANELSKLSAIH*KTS*PNGICFI*TLI*FLAGNNTRLMTFWELPYP
RGLPIIGNIHQMGNFPHVKLTEWSKQFGDFYRIKMGRYDALVVNGHENIR*NGHVRFNHP
QSYIRGNS*AT*GI*NRHRVITTVVPHTRGNKYRYRVDSSXX


>LQW222707.x1_4
AINCEVTPPMTAP*VYNCSAFFGWHYPDFGEPSKDEGIRLLVLCAVKSNMNLFKAG*LDF
CHMWLRSFLTHW*RIRGSMLLPLWVYMPLGKALNGKSSNPVVANELSKLSAIH*KTS*PN
GICFI*TLI*FLAGNNTRLMTFWELPYPRGLPIIGNIHQMGNFPHVKLTEWSKQFGDFYR
IKMGRYDALVVNGHENIR*NGHVRFNHPQSYIRGNS*ADMRYMKQNTVL*QLSLPQHARI
NKLHSFIHLAIT*LGNKL*FLNLFKFFQLHCRF
>LQW222707.x1_5
NKL*SHSPNDSAISLQLLRFFRLALPGFW*TF*G*RNQTTGFMCC*IEYEFV*SGLIRFL
SHVVALVSNSLVTNSRLHAATIVGVHALGQGTKR*KLQPSGR**VVQIVSHPLKNVLTKW
HLFHLNVDLISGR**HETYDVLGTTLSKGITHHWEYSPDGEFPARETDRMVKTIRGFLSN
QDGAL*RVGCKWARKHQVKWARSV*SPTKLHTW*LISGHEVYETEHRVITTVVAPTREDK
*VTFIHSFSYHLAW**IIISKFI*IFSAALPFX
>LQW222707.x1_6
Q*IVKSLPQ*QRHKFTIAPLFSAGITRILVNLLRMKESDYWFYVLLNRI*ICLKRVN*IS
VTCGCARF*LTGDEFEAPCCYHCGCTCPWARH*TVKAPTQWSLMSCPNCQPSIKKRLNQM
ASVSFKR*FNFWQVITRDL*RFGNYPIQGDYPSLGIFTRWGISRT*N*QNGQNNSGIFIE
SRWGVMTRWL*MGTKTSGKMGTFGLITHKVTYVVTHKRT*GI*NRTPCYNNCRCPNTRG*
ISYIHSFI*LSLSLVINYNF*IYLNFFSCTAVS

savignyi orthologs for N-term

>scf/ciona01/G126/seq_dir/hrs/G126P601052R.T0/G126P601052RG1.T0.seq    736
            0    736  ABI
            Length = 736

  Plus Strand HSPs:

 Score = 208 (73.2 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 39/39 (100%), Positives = 39/39 (100%), Frame = +3

Query:    36 LPSPRGLPIIGNVHQLTTSPHVKLSEWAKEFGDLFRIKM 74
             LPSPRGLPIIGNVHQLTTSPHVKLSEWAKEFGDLFRIKM
Sbjct:   618 LPSPRGLPIIGNVHQLTTSPHVKLSEWAKEFGDLFRIKM 734

>scf/ciona01/G126/seq_dir/hrs/G126P601052R.T0/G126P601052RG1.T0.seq    736      0    736  ABI
ACTTGNGCGCTGAAACCCCATGTTGTGGNAATTCCTTTATCCTGTTGACA
TGTGCGCTATGGAGCGTAATGCGACGCTGCTCAAAGGCGGGGCAGGTTCG
TTTCGGACAGGATATGTTTGTTTTAGTCAATGGTAATCGAAAAGAGTGTT
ATCACACGGGCAATCGTCAGATTACCTTGCGCCCACCGTCGGGTTACCGA
AGCCATAGCCGTATGTTTTGCATGATTAAGCAGCTTCTTTAGTTGCAGTA
GAAACCTATTCAACTATTGGGTTCAGGAAATCTCCGCTGAGTTTATTGCC
CAGACACACTTGACTATCCAGTGACCAGTATAAGCCGAAAGATGACGTTC
TACCCCACGTAACTATTCGGTCGTACAATTCTATGTCTGGGAAATGATGA
GATAAGCACACCGATTATTTAAGACATAATCAGACTATTAATAGACCGAG
GAAAATAATAAATCGAGTATAATTTCCGTAATCTGGTGATACCTTAGAAA
AATATTTGAACTGATAATTTGTGTCAATATTTCACCAGTGGTATCGCTGT
CAAATTTGAAATAGTTATTTCCGATTTCTGTTTAGAACAATCCGGCGAAG
ACATTGCGTTCAGAGATCTACCATCTCCGAGGGGATTACCCATAATCGGC
AATGTTCACCAACTCACAACATCCCCGCATGTAAAATTGTCGGAATGGGC
AAAGGAGTTCGGAGATTTATTTCGAATCAAGATGGG
>scf/ciona01/G126/seq_dir/hrs/G126P601052R.T0/G126P601052RG1.T0.seq_1 736 0    736  ABI
TXALKPHVVXIPLSC*HVRYGA*CDAAQRRGRFVSDRICLF*SMVIEKSVITRAIVRLPC
AHRRVTEAIAVCFA*LSSFFSCSRNLFNYWVQEISAEFIAQTHLTIQ*PV*AER*RSTPR
NYSVVQFYVWEMMR*AHRLFKT*SDY**TEENNKSSIISVIW*YLRKIFELIICVNISPV
VSLSNLK*LFPISV*NNPAKTLRSEIYHLRGDYP*SAMFTNSQHPRM*NCRNGQRSSEIY
FESRWX
>scf/ciona01/G126/seq_dir/hrs/G126P601052R.T0/G126P601052RG1.T0.seq_2 736 0    736  ABI
LXR*NPMLWXFLYPVDMCAMERNATLLKGGAGSFRTGYVCFSQW*SKRVLSHGQSSDYLA
PTVGLPKP*PYVLHD*AASLVAVETYSTIGFRKSPLSLLPRHT*LSSDQYKPKDDVLPHV
TIRSYNSMSGK**DKHTDYLRHNQTINRPRKIINRV*FP*SGDTLEKYLN**FVSIFHQW
YRCQI*NSYFRFLFRTIRRRHCVQRSTISEGITHNRQCSPTHNIPACKIVGMGKGVRRFI
SNQDG
>scf/ciona01/G126/seq_dir/hrs/G126P601052R.T0/G126P601052RG1.T0.seq_3 736 0    736  ABI
LXAETPCCGNSFILLTCALWSVMRRCSKAGQVRFGQDMFVLVNGNRKECYHTGNRQITLR
PPSGYRSHSRMFCMIKQLL*LQ*KPIQLLGSGNLR*VYCPDTLDYPVTSISRKMTFYPT*
LFGRTILCLGNDEISTPII*DIIRLLIDRGK**IEYNFRNLVIP*KNI*TDNLCQYFTSG
IAVKFEIVISDFCLEQSGEDIAFRDLPSPRGLPIIGNVHQLTTSPHVKLSEWAKEFGDLF
RIKM

JWB1167.x1 

           CHEM: term DYE: ET TIME: Wed Mar 21 17:11:08 2001
           TEMPLATE: JWB1167 DIRECTION: fwd
          Length = 605

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 7   SVITRAIVRLPCAHRRVTEAIAVC 30
           +++T   + LPC H R  EAIAVC
Sbjct: 162 TLVTYPWLPLPCPHSRAAEAIAVC 91 possible N-term part of a repeat

>JWB1167.x1_4
CVYKQT*LLFGLVSLYPRGWELE*SYPWLPLPCPHSSC*SYCSVWISRHDFWLVWSFISS
WVGT*VTYPWLPLTCPQSSC*SYCSVCISIHNFWLVWLFIFSWLGTWVTYPWLPLPCLQS
SC*SYCSVWISRHDFWLVWSFISSWVGTLVTYPWLPLPCPHSRAAEAIAVCG*ADITFAW
FGHLYSNNLSML*N*KTPIRR
>JWB1167.x1_5
VCV*ADMTFVWFGQFISSWVGT*VILSMVATPMPTFELLKLLQCVDKQA*LLVGLVIYIL
VGGNLSDLSMVATHMPTVELLKLLQCVHKHT*LLVSLVIYILVVGNLGDLSMVATPMPTV
ELLKLLQCVDKQT*LLVGLVIYILVGGNFSDLSMVTTPMPTQSSC*SYCSVWISRHYFCL
VWSFIFK*LIHVIKLKNAH*TX
>JWB1167.x1_6
SVCISRHDFCLVWSVYILVGGNLSDLIHGCHSHAHIRVAEAIAVCG*AGMTFGWFGHLYP
RGWELE*LIHGCHSHAHSRVAEVIAVCA*AYITSG*FGYLYSRGWELG*LIHGCHSHAYS
RVAEAIAVCG*ADMTFGWFGHLYPRGWEL**LIHGYHSHAHTVELLKLLQCVDKQTLLLL
GLVIYIQITYPCYKTKKRPLDG

>scf/ciona01/G126/seq_dir/hrs/G126P609292R.T0/G126P609292RE4.T0.seq_1 1015 0   1015  ABI
GGGGXXXMTLSQVEVFXXNQTPPEFCXXERQXPPDRNXGXKXPKXGKGAKEPKXXXXXAX
PGXXGNRXXXHTPKAKEXKGRXXTXQEKGKRENIFGIATK*PNAATKPTREYKAKGAIKI
NREDKLDYAY*ETDGPRH*RQRISNIHGVVKCVFCLTRTYADVGSY*VHSATPEMQKHQG
NMKKKTIGQVGVRIV*LVFLNGRF*V*HFLW*FLRRPQKQWVNLVASTTKRKVTKQAGIF
LTKIKSLFRNMTIIPGG*ETRYKIGGAGTFNKYNG*FSSPEGLLPICDRPAFKTRG*PLG
WASEQFPTKRGGL*TWG*LSNTQKNPKRRSKTPWGFNIX
>scf/ciona01/G126/seq_dir/hrs/G126P609292R.T0/G126P609292RE4.T0.seq_2 1015 0   1015  ABI
EAGGXVX*PYLKWRSFXXTKPPPSFVXXSAKXRPTETXGXXXPRXGRARKNPXXXXXXXP
REXXGTGXKXTHQRQRKXRGGXKXXKKREKGKTFLVLLRNNQTRPLNRRVNIKRRGL*K*
TAKTN*TTHIKKQTDRDIKGKEFQIFMAL*NVCSV*HVHMLMWGVIEFILQRLRCRNIKV
I*KRKPLDRLEFVLYD*SF*TGGSRSSTFCGNFCAGRRNNGLIWLLQLQSER*PNKRVFS
*RKLKAYFEI*Q*SPGDKKRVIK*AGRAPLINITVNFLARKGFYPFATVRHLKQGDSP*D
GPPSNSPPKGVGSRPGGNSQTPKKTPSEGLKPPGVLIY
>scf/ciona01/G126/seq_dir/hrs/G126P609292R.T0/G126P609292RE4.T0.seq_3 1015 0   1015  ABI
RRGXXXYDLISSGGLLXKPNPPRVLXXRAPKXARQKRXXKXXQEXEGRERTQXXXXXRXP
GKXREPGXXTHTKGKGXKGAGXNXXRKGKKGKHFWYCYEITKRGH*TDA*I*SEGGYKNK
PRRQTRLRILRNRRTATLKAKNFKYSWRCKMCVLFNTYIC*CGELLSSFCNA*DAETSR*
YEKENHWTGWSSYCMISLFKRAVLGLALSVVIFAPAAETMG*FGCFNYKAKGNQTSGYFL
NEN*KLISKYDNNPRGIRNAL*NRRGGHL**I*RLIF*PGRAFTHLRPSGI*NKGIAPRM
GLRAIPHQKGWALDLGVTLKHPKKPQAKV*NPLGF*Y

>scf/ciona01/G126/seq_dir/hrs/G126P69239F.T0/G126P69239FF6.T0.seq_4 708 0    708  ABI
EV*YFLC*FLCRPQXTMC*FVCFNYKAKGNQTXWVYS*RKLKANIEI*Q*SRKDKKRVIE
SGVSVTFNKYNVLFF*PAMHFYQFATIGNLKQG**QLVLPIRAITNEIVMSIDYELNFKL
QKNRLVEVLKYIWFYIYFIVLSLLFSRRYSKLYYCS*NNVI*DF**KQIPTISC*FRTSL
FENV*F*IRLVCMVALFTLLLWCNCYLINTKLDFSL*YKIAITRIXTTGR*YISQS
>scf/ciona01/G126/seq_dir/hrs/G126P69239F.T0/G126P69239FF6.T0.seq_5 708 0    708  ABI
GLVLSVLIFVPAAEXNVLICMLQLQSER*PNXVGIFLTKIKS*YRNMTIIP*G*ETRYRI
RCVGNF**I*RFIFLARNAFLPICDDRQFKTRLIATSIAYQSNYQRNCYVYRL*VKF*IT
KKSTSRSS*VHLVLYLFYSFKSPFF*AIFQALLLLLK*CNLGFLIKANTDYQLLI*NIFI
RKCVILN*VSMHGCFVYPFTLVQLLFDQYKIGFLFII*NCNY*NXHHRTMIHIAKX
>scf/ciona01/G126/seq_dir/hrs/G126P69239F.T0/G126P69239FF6.T0.seq_6 708 0    708  ABI
RSSTFCVNFCAGRRXQCVNLYASTTKRKVTKXSGYILNEN*KLISKYDNNPVRIRNAL*N
QVCR*LLINITFYFSSPQCIFTNLRRSAI*NKVDSN*YCLSEQLPTKLLCL*TMS*ILNY
KKID*SKFLSTSGFIFIL*F*VSFFLGDIPSFIIALKIM*SRIFNKSKYRLSAVNLEHLY
SKMCNFKLG*YAWLLCLPFYFGAIVI*SIQNWISLYNIKLQLLEXPPQDDDTYRKV

>scf/ciona01/G126/seq_dir/hrs/G126P61635R.T0/G126P61635RA1.T0.seq_1 738 0    738  ABI
FVGTETPLGGNSNVLLGFLIKANTDYQLLI*NIFIRNV*F*IRLVCMVALFTLLLWCNCY
LINTKLDFSL*YKIAITRGQWFLSLDIELYCFLI*QPFSSY*R*VDYHPISVCCAPFV*I
SVLTKIFRFERALELTKINQPLDF*VFNFCPNKPCYLILNILSYRVILF*TAEAKCVAIV
TVCLHF*SRLNLKYRY*SAFI*FLSKNN*RILGFYC*SQFFPVPMFSTLILLTQVYFQNI
VPII*K
>scf/ciona01/G126/seq_dir/hrs/G126P61635R.T0/G126P61635RA1.T0.seq_2 738 0    738  ABI
SWALKPPLVXILMSX*DF**KQIPTISC*FRTSLFEMCNFKLG*YAWLLCLPFYFGAIVI
*SIQNWISLYNIKLQLLEVNGS*A*TLNYIAS*YSSHSVHISVKLITTQLVFVVHPLYRL
VF*PKYLGLNELLSLPR*TNLWTFKFLTFAPINRVILF*TS*VIVLSYFKQPKPNVLQS*
QFAYIFNQD*I*NIATKVHLFNFYQRTIDEF*DFIANPNFFRSRCFQLLYY*PKSIFRTL
FLLFK
>scf/ciona01/G126/seq_dir/hrs/G126P61635R.T0/G126P61635RA1.T0.seq_3 738 0    738  ABI
RGH*NPPWWXF*CPXRIFNKSKYRLSAVNLEHLYSKCVILN*VSMHGCFVYPFTLVQLLF
DQYKIGFLFII*NCNY*RSMVLKPRH*IILLPNIAAIQFILALS*LPPN*CLLCTLCID*
CFDQNI*V*TSS*AYQDKPTFGLLSF*LLPQ*TVLSYFKHLKLSCYLILNSRSQMCCNRD
SLLTFLIKIKFKISLLKCIYLISIKEQLTNSRILLLIPIFSGPDVFNSYIIDPSLFSEHC
SYYLK

>scf/ciona01/G126/seq_dir/hrs/G126P69648R.T0/G126P69648RD1.T0.seq_4 742 0    742  ABI
LALS*LPPQ*CLLCTLCID*CFDQXYLGLNELLSLPRINQPFGLLSF*LLPQ*TVLSYFK
HLKLSCYLILNSRSQMCCNRDSLLTFLIKIKFKISLLKCIYLISIKEQLTNSRILLLIPI
FSGPDVFNSYIIDPSLFSEHCSYYFKAAINRANRKGGDL*NSTHLLYRGGLGLAGKQTTK
QISTLIAFLSFP*GNINRKTCHKLTKYRKVF*VNPTTLTSYNIVFN*LVSNEE*VWNSTT
WGFSVKA
>scf/ciona01/G126/seq_dir/hrs/G126P69648R.T0/G126P69648RD1.T0.seq_5 742 0    742  ABI
ISVKLITTPIVFVVHPLYRLVF*PXIFRFERALELTKNKPTLWTFKFLTFAPINRVILF*
TS*VIVLSYFKQPKPNVLQS*QFAYIFNQD*I*NIATKVHLFNFYQRTIDEF*DFIANPN
FFRSGCFQLLYY*PKSIFRTLFLLFQGRYK*S*SERG*FVKFYSFALSRWFRIGRKTDD*
AN*HFNCFFKFSIR*YKQENLP*INQVQKSILG*PYNFN*L*HCF*LASFE*RIGLEFHH
MGFQCQSX
>scf/ciona01/G126/seq_dir/hrs/G126P69648R.T0/G126P69648RD1.T0.seq_6 742 0    742  ABI
*R*VDYHPNSVCCAPFV*ISVLTKXI*V*TSS*AYQE*TNPLDF*VFNFCPNKPCYLILN
ILSYRVILF*TAEAKCVAIVTVCLHF*SRLNLKYRY*SAFI*FLSKNN*RILGFYC*SQF
FPVRMFSTLILLTQVYFQNIVPIISRPL*IELIGKGVICKILLICFIEVV*DWQENRRLS
KLAL*LLF*VFHKVI*TGKLAIN*PSTEKYFRLTLQL*LAITLFLTS*FRMKNRFGIPPH
GVSVSKL


>scf/ciona01/G126/seq_dir/hrs/G126P68717F.T0/G126P68717FF6.T0.seq_1 703 0    703  ABI
DLGTIHPPVVEKPPLNRANRKGVICKILLICFIEVV*DWQENRRLSKLAL*LLF*VFHKV
I*TGKLAIN*PSTEKYFRLTLQL*LAITLFLTS*FSN*RTRL*IGLAARLFFILIYTYFT
GVQIFCNA*PFAAV**SIAEYISCIKCFGKVELAASRNTIVSQLL*HFKV*NKIIFVPEL
HQIVK*INLSILFKLHLRTLHKALSTLEICNIGNSVKNQLGTLLGISLGTLIVTX
>scf/ciona01/G126/seq_dir/hrs/G126P68717F.T0/G126P68717FF6.T0.seq_2 703 0    703  ABI
TWVQSTLLWWKNPL*IELIGRG*FVKFYSFALSRWFRIGRKTDD*AN*HFNCFFKFSIR*
YKQENLP*INQVQKSILG*PYNFN*L*HCF*LASFRIEELGFESVWQQDCFLY*FIHTSR
ACKYSAMHDRSPQCDRASPNTSAA*SASAK*N*LRLETRLFHSCCNISRCKIKSFLCQSY
IK*SSRLICQYCLNYT*EHYTRL*APWKFVILVIVLKINWEHCLEFHWEH**SR
>scf/ciona01/G126/seq_dir/hrs/G126P68717F.T0/G126P68717FF6.T0.seq_3 703 0    703  ABI
LGYNPPSCGGKTPSK*S*SEGGDL*NSTHLLYRGGLGLAGKQTTKQISTLIAFLSFP*GN
INRKTCHKLTKYRKVF*VNPTTLTSYNIVFN*LVFELKN*ALNRFGSKTVFYTDLYILHG
RANILQCMTVRRSVIEHRRIHQLHKVLRQSRISCVSKHDCFTAVVTFQGVK*NHFCARVT
SNSQVD*SVNTV*ITPKNTTQGFKHLGNL*YW**C*KSTGNTAWNFIGNTDSH


>scf/ciona01/G126/seq_dir/hrs/G126P65559R.T0/G126P65559RC5.T0.seq_4 750 0    750  ABI
FXVVK*NHFCARVTSXSQVD*FVNTV*ITPKNTTTRL*APWKFVILVIVLKINWEHCLEF
HWEH**SRAHS*KSTFMN**SANKAHTP*PDIHVI*YHYRRAASNSWNDVIFSIFLKFGA
ILSITRQNKYLF*NLSINVYVLVTDK*FSNLKRQ*FKWMVI*NVSNFNRKV*MEIIFPCL
NVS*N*FEIFD*TSIKEMRE*TCSGNAEKQWAALMLSELSH*SFKVKASPAVTKQKCVAE
SHHMEFQCQS
>scf/ciona01/G126/seq_dir/hrs/G126P65559R.T0/G126P65559RC5.T0.seq_5 750 0    750  ABI
XSCKIKSFLCQSYIX*SSRLICQYCLNYT*EHYHKALSTLEICNIGNSVKNQLGTLLGIS
LGTLIVTRSQLKVNIYELIVCK*GAHTVTRYTRDLVSLPAGCFKQLE*CNLQYFFKVWCD
FKHNPSE*IFILKSLHKCICTSNR*VI**FKKAVI*MDGDLKCIQFQ*KSMNGNYISVFK
CFLELI*NFRLNKHQGNA*IDM*WKCGKTMGCIDVI*TLSLKF*GQSLPGRY*TKVRGGI
XPHGVSVSKX
>scf/ciona01/G126/seq_dir/hrs/G126P65559R.T0/G126P65559RC5.T0.seq_6 750 0    750  ABI
SKL*NKIIFVPELHXIVK*INLSILFKLHLRTLPQGFKHLGNL*YW**C*KSTGNTAWNF
IGNTDSHALTVKSQHL*IDSLQIRRTHRDQIYT*FSIITGGLLQTVGMM*SSVFF*SLVR
F*A*PVRINIYFKISP*MYMY**QISDLVI*KGSDLNGW*FKMYPISIEKYEWKLYFRV*
MFLRINLKFSIEQASRKCVNRHVVEMRKNNGLH*CYLNSLIEVLRSKPPRPLLNKSAWRN
XTTWSFSVKV


>scf/ciona01/G126/seq_dir/hrs/G126P612776R.T0/G126P612776RG4.T0.seq_1 718 0    718  ABI
*APCGGINVNIFPCLNVS*N*FEIFD*TSIKEMRE*TCSGNAEKHGLH*CYLNSLIEVLR
SKPPRPLLNK*SWRVLYNVGVEFLFACYLWILLFIEMNYMELRVRLAITKNYLYPCRFK*
AIFLLHAAFKFFLLRWACALVKSNI*GSIISRFMLDMLLEHLLSWNIFISVALSVLTCAL
WSVMRRCSKGGAGSFRTGYVCFSQW*SKRVLSHGQSSDYLAPHRRVTEAIARMFCMIKQX
>scf/ciona01/G126/seq_dir/hrs/G126P612776R.T0/G126P612776RG4.T0.seq_2 718 0    718  ABI
KLHVVELMSIYFRV*MFLRINLKFSIEQASRKCVNRHVVEMRKNMGCIDVI*TLSLKF*G
QSLPGRY*TNSRGEFFIMSVSNFYLLVICGYCYL*R*TIWN*EFGLQ*RKITYILAGLNR
PFFCCTRHLNFFYCVGRAR**KATFRVPSFQDLCWTCCWNIF*AGTSL*VWLYPC*HVRY
GA*CDAAQKAGQVRFGQDMFVLVNGNRKECYHTGNRQITLRPTVGLPKP*PVCFA*LSS
>scf/ciona01/G126/seq_dir/hrs/G126P612776R.T0/G126P612776RG4.T0.seq_3 718 0    718  ABI
SSMWWN*CQYISVFKCFLELI*NFRLNKHQGNA*IDM*WKCGKTWAALMLSELSH*SFKV
KASPAVTKQIVVASSL*CRCRISICLLFVDIAIYRDELYGIESSACNNEKLLISLQV*IG
HFSVARGI*IFFIALGVRVSKKQHLGFHHFKIYVGHVAGTSFKLEHLYKCGFIRVDMCAM
ERNATLLKRRGRFVSDRICLF*SMVIEKSVITRAIVRLPCAPPSGYRSHSPYVLHD*A


>scf/ciona01/G126/seq_dir/hrs/G126P609532R.T0/G126P609532RA6.T0.seq_1 719 0    719  ABI
KLHVVESCLLFVDIAIYRDELYGIESSACNNEKLLISLQV*IGHFSVARGI*IFFIALGV
RVSKKQHLGFHHFKIYVGHVAGTSFKLEHLYKCGFIRVDMCAMERNATLLKRRGRFVSDR
ICLF*SMVIEKSVITRAIVRLPCAHRRVTEAIAVCFA*LSSFFSCSRNLFNY*VQEMSAE
FIAQTHLTIQ*PV*A*KMTYYPTVTIRSYNSMSGK**DKHTDYLRHNQTINRPRKIINRX
>scf/ciona01/G126/seq_dir/hrs/G126P609532R.T0/G126P609532RA6.T0.seq_2 719 0    719  ABI
SSMWWNLVCYLSILLFIEMNYMELRVRLAITKNYLYPCRFK*AIFLLHAAFKFFLLRWAC
ALVKSNI*GSIISRFMLDMLLEHLLSWNIFISVALSVLTCALWSVMRRCSKGGAGSFRTG
YVCFSQW*SKRVLSHGQSSDYLAPTVGLPKP*PYVLHD*AASLVAVETYSTIRFRKCPLS
LLPRHT*LSSDQYKPER*RTTPX*LFGRTILCLGNDEISTPII*DIIRLLIDRGK**IEX
>scf/ciona01/G126/seq_dir/hrs/G126P609532R.T0/G126P609532RA6.T0.seq_3 719 0    719  ABI
APCGGILFVICRYCYL*R*TIWN*EFGLQ*RKITYILAGLNRPFFCCTRHLNFFYCVGRA
R**KATFRVPSFQDLCWTCCWNIF*AGTSL*VWLYPC*HVRYGA*CDAAQKAGQVRFGQD
MFVLVNGNRKECYHTGNRQITLRPPSGYRSHSRMFCMIKQLL*LQ*KPIQLLGSGNVR*V
YCPDTLDYPVTSISLKDDVLPHXNYSVVQFYVWEMMR*AHRLFKT*SDY**TEENNKSX


>scf/ciona01/G126/seq_dir/hrs/G126P601454F.T0/G126P601454FF12.T0.seq_1 712 0    712  ABI
ALGYXXSVRGWKNLACAL*KLIRVPSFQDYVGHVAGTSFKLEHLYKCGFIRVDMCAMERN
ATLLKRRGRFFSDRICLF*SMVIEKSVITRAIVRLPCAHRRVTEAIAVCFA*LSSFFSCS
RNLFNYWVQEISAEFIAQTHLTIQ*PV*AER*RSTPRNYSVVQFYVWEMMR*AHRLFKT*
SDY**TEENNKSSIISRIW*YLRKIFELIICVNISPVVSLSNLK*LFPISC*NNAAKX
>scf/ciona01/G126/seq_dir/hrs/G126P601454F.T0/G126P601454FF12.T0.seq_2 712 0    712  ABI
HLGTEXRSGGGKTSPARYKNSLGFHHFKIMLDM*LEHLLSWNIFISVALSVLTCALWSVM
RRCSKGGAGSFRTGYVCFSQW*SKRVLSHGQSSDYLAPTVGLPKP*PYVLHD*AASLVAV
ETYSTIGFRKSPLSLLPRHT*LSSDQYKPKDDVLPHVTIRSYNSMSGK**DKHTDYLRHN
QTINRPRKIINRV*FPESGDTLEKYLN**FVSIFHQWYRCQI*NSYFRFLVRTMRPK
>scf/ciona01/G126/seq_dir/hrs/G126P601454F.T0/G126P601454FF12.T0.seq_3 712 0    712  ABI
TWVXNXGPGVEKPRLRVIKTH*GSIISRLCWTCSWNIF*AGTSL*VWLYPC*HVRYGA*C
DAAQKAGQVLFGQDMFVLVNGNRKECYHTGNRQITLRPPSGYRSHSRMFCMIKQLL*LQ*
KPIQLLGSGNLR*VYCPDTLDYPVTSISRKMTFYPT*LFGRTILCLGNDEISTPII*DII
RLLIDRGK**IEYNFPNLVIP*KNI*TDNLCQYFTSGIAVKFEIVISDFLLEQCGQ


>scf/ciona01/G126/seq_dir/hrs/G126P69344F.T0/G126P69344FB12.T0.seq    file 7    663  ABI
TGTGGTGGAAATCCGAGTGTTATCACACGGGCAATCGTCTATTACCTTGC
GCCCACCGTCGGGTTACCGAAGCCATAGCCGTATGTTTTGCATGATTAAG
CAGCTTCTTTAGTTGCAGTAGAAACCTATTCAACTATTAGGTTCAGGAAA
TGTCCGCTGAGTTTATTGCCCAGACACACTTGACTATCCAGTGACCAGTA
TAAGCCGAAAGATGACGTACTACCCCACGTAACTATTCGGTCGTACAATT
CTATGTCTGGGAAATGATGAGATAAGCACACCGATTATTTAAGACATAAT
CAGACTATTAATAGACCGAGGAAAATAATAAATCGAGTATAATATCCGTA
ATCTGGTGATACCTTAGAAAAATATTTGAACTGATAATTTGTGTCAATAT
TTCACCAGTGGTATCGCTGTCAAATTTGAAATAGTTATTTCCGATTTCTG
TTTAGAACAATCCGGCGAAGACATTGCGTTCAGGGATCTACCTTCTCCGA
GGGGATTACCCATAATCGGCAATGTTCACCAACTCACAACATCCCCGCAT
GTAAAACTGTCGGAATGGGCGAAGGAGTTCGGAGATTTATTTCGAATCAA
GATGGGATGCTTCGATACATTGGTCGTAACCGGATATGACAATATAAGGT
ATAATGGCCTCAT

>scf/ciona01/G126/seq_dir/hrs/G126P69344F.T0/G126P69344FB12.T0.seq_1 file 7    663  ABI
CGGNPSVITRAIVYYLAPTVGLPKP*PYVLHD*AASLVAVETYSTIRFRKCPLSLLPRHT
*LSSDQYKPKDDVLPHVTIRSYNSMSGK**DKHTDYLRHNQTINRPRKIINRV*YP*SGD
TLEKYLN**FVSIFHQWYRCQI*NSYFRFLFRTIRRRHCVQGSTFSEGITHNRQCSPTHN
IPACKTVGMGEGVRRFISNQDGMLRYIGRNRI*QYKV*WPH
>scf/ciona01/G126/seq_dir/hrs/G126P69344F.T0/G126P69344FB12.T0.seq_2 file 7    663  ABI
VVEIRVLSHGQSSITLRPPSGYRSHSRMFCMIKQLL*LQ*KPIQLLGSGNVR*VYCPDTL
DYPVTSISRKMTYYPT*LFGRTILCLGNDEISTPII*DIIRLLIDRGK**IEYNIRNLVI
P*KNI*TDNLCQYFTSGIAVKFEIVISDFCLEQSGEDIAFRD LPSPRGLPIIGNVHQLTT
SPHVKLSEWAKEFGDLFRIKMGCFDTLVVTGYDNIR YNGL
>scf/ciona01/G126/seq_dir/hrs/G126P69344F.T0/G126P69344FB12.T0.seq_3 file 7    663  ABI
WWKSECYHTGNRLLPCAHRRVTEAIAVCFA*LSSFFSCSRNLFNY*VQEMSAEFIAQTHL
TIQ*PV*AER*RTTPRNYSVVQFYVWEMMR*AHRLFKT*SDY**TEENNKSSIISVIW*Y
LRKIFELIICVNISPVVSLSNLK*LFPISV*NNPAKTLRSGIYLLRGDYP*SAMFTNSQH
PRM*NCRNGRRSSEIYFESRWDASIHWS*PDMTI*GIMAS

>scf/ciona01/G126/seq_dir/hrs/G126P69344F.T0/G126P69344FB12.T0.seq    663
            0    663  ABI
            Length = 663

  Plus Strand HSPs:

 Score = 219 (77.1 bits), Expect = 8.7e-18, P = 8.7e-18
 Identities = 39/58 (67%), Positives = 48/58 (82%), Frame = +2

Query:     1 LPYPRGLPIIGNIHQMGNFPHVKLTEWSKQFGDFYRIKMGRYDALVVNGHENIRRNCL 58
             LP PRGLPIIGN+HQ+   PHVKL+EW+K+FGD +RIKMG +D LVV G++NIR N L
Sbjct:   488 LPSPRGLPIIGNVHQLTTSPHVKLSEWAKEFGDLFRIKMGCFDTLVVTGYDNIRYNGL 661

>scf/ciona01/G126/seq_dir/hrs/G126P64092R.T0/G126P64092RD4.T0.seq    file 5
            743  ABI
            Length = 743

  Minus Strand HSPs:

 Score = 142 (50.0 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 24/35 (68%), Positives = 31/35 (88%), Frame = -1

Query:    34 PHVKLTEWSKQFGDFYRIKMGRYDALVVNGHENIR 68
             PHVKL+EW+K+FGD +RIKMG +D LVV G++NIR
Sbjct:   614 PHVKLSEWAKEFGDLFRIKMGCFDTLVVTGYDNIR 510

 Score = 83 (29.2 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 15/23 (65%), Positives = 18/23 (78%), Frame = -2

Query:    10 MTFWELPYPRGLPIIGNIHQMGN 32
             + F +LP PRGLPIIGN+HQ  N
Sbjct:   688 IAFRDLPSPRGLPIIGNVHQXHN 620

>LQW279860.y1_1
GHEIESSSVPVHSRRIMARLQLSSYQFAAACCCGWAFTPEFLFDTFLRE*RESKLLGFVV
AV*SRI*SLF*SGLI*ISVTCGWRSFLTHW*RIRGSMLLPLWVYMPLGKALNGKSSNPVV
ANELSKLSAIH*KTS*PNGICFI*TLI*FLAGNNTRLMTFWELPYPRGLPIIGNIHQMGN
FPHVKLTEWSKQFGDFYRIKMGRYDALVVNGHENIR*NGHVRFNHPQSYIRGNS*ADMRX
>LQW279860.y1_2
DMR*NRARYQFTHAA*WQGCN*VLINLLPRVVAAGHLRRNFCLIRF*GSEGNQNYWVLWW
LFKVEYEVCFKAG*FKFLSHVVGARF*LTGDEFEAPCCYHCGCTCPWARH*TVKAPTQWS
LMSCPNCQPSIKKRLNQMASVSFKR*FNFWQVITRDL*RFGNYPIQGDYPSLGIFTRWGI
SRT*N*QNGQNNSGIFIESRWGVMTRWL*MGTKTSGKMGTFGLITHKVTYVVTHKRT*GX
>LQW279860.y1_3
T*DRIELGTSSLTPHNGKAAIKFLSICCRVLLRLGIYAGIFV*YVSKGVKGIKTTGFCGG
CLKSNMKFVLKRVNLNFCHMWLALVSNSLVTNSRLHAATIVGVHALGQGTKR*KLQPSGR
**VVQIVSHPLKNVLTKWHLFHLNVDLISGR**HETYDVLGTTLSKGITHHWEYSPDGEF
PARETDRMVKTIRGFLSNQDGAL*RVGCKWARKHQVKWARSV*SPTKLHTW*LISGHEV


>LQW228305.y1_1
KED*MSRSSGILSNQDGAL*RVGCKWARKHQVKWARSV*SPTKLHTW*LISGHEVYETEH
RVITTVVAPTREDK*VTFIHSFSYHLAW**IIISKFI*IFSLTETASRKNPPRLLEDLPS
KHPS*SKKDSVLVSVIIGIYL*LGSKHEVYKCTMCAWCKSRHPCYNSTVGMRCMNTPCVS
GV*EDTHVIT*Q*A*GV*IHHVCLVYKKTPML*LDSEH*VYEYTMCVWCISRHPCYNLTV
STRCMTML*PDSEHEVYEYIMCVWCIRRHPVITRK*TLGV*LLTCSGG*VNPCLTEITQG
FIFKRSDNGKCNTPFLVKHLDPG*MRNESKRQSNPQKKTRKDRGRGX
>LQW228305.y1_2
KRTK*AGPRGFYRIKMGRYDALVVNGHENIR*NGHVRFNHPQSYIRGNS*ADMRYMKQNT
VL*QLSLPQHARINKLHSFIHLAIT*LGNKL*FLNLFKFFH*QKLPREKIRRVCWKTSLR
NIQVDRRRTQY*FQ*L*VFTFD*AVSMRCINALCVPGVKVDTHVITRQWA*GV*IHHVCL
VYKKTPML*LDSEHEVYEYTMCVWCIRRHPCYNSTVSIRCMNTPCVSGV*VDTHVIT*Q*
ARGV*LCYNPTVSMRCMNTSCVSGV*EDTQL*LESEP*VFDYSRVPAVK*THV*LKSPKG
LYLNEVTTVNVIPRFW*NTWTQGK*GTRAKDSLTRKKKPERIEEGE
>LQW228305.y1_3
RGLNEPVLGDFIESRWGVMTRWL*MGTKTSGKMGTFGLITHKVTYVVTHKRT*GI*NRTP
CYNNCRCPNTRG*ISYIHSFI*LSLSLVINYNF*IYLNFFTNRNCLAKKSAAFAGRPPFE
TSKLIEEGLSISFSNYRYLPLIRQ*A*GV*MHYVCLV*K*TPML*LDSGHEVYEYTMCVW
CIRRHPCYNLTVSMRCMNTPCVSGV*EDTHVITRQ*ALGV*IHHVCLVYK*TPML*LDSE
HEVYDYVITRQ*A*GV*IHHVCLVYKKTPSYNSKVNLRCLITHVFRRLSKPMFN*NHPRV
YI*TK*QR*M*YPVSGKTPGPRVNEEREQKTV*PAKKNPKG*RKG

>LQW240272.y1_1
KGDITEPGPARFVYRLIVLLWRMIHLAVIM*LIYPIRGG*RQSL*HRCMNMI*NSPKTIT
HKVTYVVTGRPKRARGL*NRTPVL*QLSLPRHARINKLHTW*LVSEHEVYETEHPC*RLS
LSHHAGIHNLNNFNYIDFQGLVGDLHDTVIYSTTSVSSTICFGRSFTRQDPELKEFLRNF
QSFDKAMGASQIINFWPFLKYFPVLGKSFRVISHNLYSRMGEDGTLF*SIYSYILVVNKE
HSKNDKTCSVTFIDRCNCLKTIRI*ILEQRCHFPKX*MVTRR*IYMKDKYNGQQRKRARR
DEKKEKKDQGKK*QEHKKKQRRNEKPX
>LQW240272.y1_2
KEI*LSLVRRDLYIDLLFYFGG*FIWL**CNLFILYVAGNDSPYNTGA*I*YKILPKQ*P
TK*HTW*LVGLSGHEVYETEHPCYNNCRCPVMRG*INYIRGNL*VSTRCMKQNTRVNDCR
YPTTREYTT*TTLITLISRV**ATSTTR*YTAPPA*VPRFVSGEVLQGKTRS*KNFSEIF
KVSTKPWARLRLSTFGHF*NTFRCWESPFG*FPIIYIVGWGKMGHFFNLYTRTFW**IKN
IQRMIKLVL*LS*TVVIV*KRSGFKY*SKGVIFPSXKW*QGGEFT*RTNITGNSANGHGE
TRKKKKRTRGKNSKNTKKNKEEMKNH
>LQW240272.y1_3
RRYN*AWSGEICI*TYCFTLADDSFGCNNVTYLSYTWRVTTVLITQVHEYDIKFSQNNNP
QSNIRGNW*A*AGTRFMKQNTRVITTVVAPSCEDK*ITYVVTCK*ARGV*NRTPVLTTVV
IPPRGNTQLKQL*LH*FPGFSRRPPRHGDIQHHQREFHDLFRAKFYKARPGVERISQKFS
KFRQSHGRVSDYQLLAIFKILSGAGKVLSGNFP*FI**DGGRWDTFLIYILVHFGSK*RT
FKE**NLFCDFHRPL*LFKNDQDLNIRAKVSFSQAXNGDKEVNLHEGQI*RATAQTGTAR
REKRKKGPGEKIARTQKKTKKK*KT

blast hit from opposite end of DEV12172.x1 = 
>SEQUENCE 88 197-251 MID REGION 37% TO 2B6
          Length = 56

  Plus Strand HSPs:

 Score = 175 (61.6 bits), Expect = 4.3e-16, P = 4.3e-16
 Identities = 32/35 (91%), Positives = 34/35 (97%), Frame = +3

Query:    72 KNPELKEFLRNVQSFDKAMGASQIINFWPFLKYFP 176
             ++PELKEFLRN QSFDKAMGASQIINFWPFLKYFP
Sbjct:    22 QDPELKEFLRNFQSFDKAMGASQIINFWPFLKYFP 56

 Score = 65 (22.9 bits), Expect = 0.00056, P = 0.00056
 Identities = 18/47 (38%), Positives = 22/47 (46%), Frame = +1

Query:    22 STQRESTICFGRSFTRARTRS*KNFSEMFKVSTKPWARLRLSTFGHF 162
             +T   STICFGRSFTR      K F   F+   K     ++  F  F
Sbjct:     6 TTSVSSTICFGRSFTRQDPEL-KEFLRNFQSFDKAMGASQIINFWPF 51





GCiWno834_j23.b1 from opposite end of seq downstream of I-helix
YNLLLIQADRDTRVWENPE
QFEPERFLARDPTTGGARVVASETSKILNWGAGKRRCPGAELSRHELFIYIANLVKLCYI
EQAVEGIEPAIPWPCTPGISTKPKAFRVKVTQR*

>GCiWno38_g15.b1_1
LYVVYVGTTLGHLRAXNMRDLADCLWAQSNQVNSNGTAPRHTANGATDELKPRHAMNGAN
GNGMTHHNTNGDVTHSNGINGEPPTKINRQLTDQQRRIAYGASDAFGAGFDTISAMITWS
IFYMAVFPEHQRKVICIK*LSTYISSHYVNGDLILASNNIVGRGKMGHPTILFSRTIL**
TKNIQVILKLYPHDSHRPLLIV*NTIRIICAKXCPILPHPYYNRIMTY*IRERWDIXSYI
FTYHLVVNKEYSKNIKPYLHNP*TGCNCLNTINTI*ILYVAQIEKNRPLERHVXLRIRX
>GCiWno38_g15.b1_2
FTLSMLEQHWDTYVPXI*ETWQIVCGPKATRLTAMARRHATQQMAPQTS*SHATQ*MVPT
VMV*HITIRMVTSHIATGLTGNPLPR*TVN*RINSAV*RMAQATHSAQVSTL*AL*SRGR
FSTWPFFLNTNER*FALNDYLRIFPHIMLMAT*F*LRII**VGGRWDTLPFCFLVPFCSK
QRTYK*F*NYILTTLIDLC*LFKTRSG*YVLXGVRSYPTLTIIE**HTRSGKDGTXFHIF
SRTIW**TRNIQKI*NRIFTIHKLVVIV*IR*TRYKSYMSPRSRRIDR*NVMFXYVYG
>GCiWno38_g15.b1_3
LRCLCWNNTGTLTCPQYERLGRLSVGPKQPG*QQWHGATPHSKWRHRRVEATPRNEWCQR
*WYDTSQYEW*RHT*QRD*RGTPYQDKPSTNGSTAPYSVWRKRRIRRRFRHYKRYDHVVD
FLHGRFS*TPTKGNLH*MIIYVYFLTLC*WRLDFSFE*YSRSGEDGTPYHSVFSYHFVVN
KEHTSNSKTISSRLS*TFVNCLKHDQDNMC*XVSDLTPPLL*SNNDILDQGKMGHXFIYF
HVPFGSKQGIFKKYKTVSSQSINWL*LFKYDKHDINLICRPDREESTVRTSCXITYT


>LQW199164.x1_3
                              RKEEIFSIYFHVPFASKQGIFKKI*NRIFTNPINCC*LFKIR*NTI*NHYMSSQ IREEID
                              RLETSMFSLRHHGDVCP YTQAWLYEVLRHISVSPLLVPHYTVKQVEVNGTMIPAGVVVMY
                              NVANVSKYECM*LIYPCSQ*KSL*HGCSVSYTLCLLKSYHVCNLFILAWRGNHRRYNTGV
                              LFHKTRTCLRVNTYVTYLSSHGGATTVVITHVF**YK*TLSIYAFKIVVSNRKYIYSRTI
                              YKLLLIQLTEISSWENPNN*A*RIGRNTTGGTMVSERKLLGRKGCEHYQQRILTEVDHEG
                              NNRYRAHRNRGER*IPKN

>GCiWno777_c20.g1_1
SFSSDPR*RMSYTQAWLYEVLRHISVSPLLVPHYTVKQVEVNGTMIPAGVVVLFNVANVS
KYECM*LIYPCSQ*KSL*HGCSVSYTLCPLTS*MYVTYLSSHGGATTVVITRVFCFIHLI
PAYKLPRM*LIYPRMEGQRQSL*HTCSVYLNNHCFYTFLR**FSN*WVFLTAELIYNLLL
IQADRDTRVWENPEQFEPERFLARDPTTGGARVVASETSKILNWGAGKRRCPGAELSRHE
LFIYIAKPGKVMVHPTGSGRESNPRSLGLYPKNFNQNKKLSEFK*RTVDFGGHGVGTQPS
ISKKKKTFKX

>GCiWno832_l19.b1
TTTCTACACCTTGTGCCTGCTTACAAGTTACCACGTATGTAACTTATTTATCCTCGCATGGAGGGGCAACGACAGTCGTT
ATAACACGGGTGTTCTGTTTCATACACCTCATACCTGCTTACAAGTTACCACGTATGTAACTTATTTATCCTCGCATGGA
GGGGCAACGACAGTCGTTATAACACACGTGTTCTGTTTATTTAAATAACCATTGTTTTTATACGTTTTTAAGATAGTAGT
TCTCAAACTGTTTGTTTTTTTTAACAGCAGAACTTATATATAACTTATTACTCATACAGGCTGACAGAGATACTCGAGTT
TGGGAAAACCCCGAACAATTTGAGCCTGAGCGATTTCTGGCACGAGATCCAACCACTGGGGGCGCAAGAGTGGTTGCAAG
TGAAACGTCGAAGATTTTAAATTGGGGGGCGGGAAAGAGGCGTTGTCCCGGGGCTGAGTTATCCAGACACGAACTATTTA
TTTACAATGCAAACCTGGTAAAGTTATGTTACATCGAACAGGCAGTGGAGGGAATCGAACCCGCGATCCCTTGGCCTTGT
ACCCCAGGAATTTCAACCAAACCAAAAGCTTTCCGAGTCAAAGTAACGCGGCGTTGATTTTGGGGTCACGGTGTGGGACC
ACAGCAAGTATTTCAAAGAAAAATAAACATTTTAGAAAATCTTCACGAAAGAAATCCATTACAAGCTAAAGATAAACTTC
GTANACGACGCAGACAGCGCCAGTGGCGCAAACGACGTCGATGGCGCAAGTGACGCGAATGACGCAAATGAGAGGATGTA
TTTGNTAAACCCACTATAAATCAATAAAAATGACGAAACAANCGACCAGAAACACAAACGGCTTN

>GCiWno832_l19.b1_1
FLHLVPAYKLPRM*LIYPRMEGQRQSL*HGCSVSYTSYLLTSYHVCNLFILAWRGNDSRY
NTRVLFI*ITIVFIRF*DSSSQTVCFF*QQNLYITYYSYRLTEILEFGKTPNNLSLSDFW
HEIQPLGAQEWLQVKRRRF*IGGRERGVVPGLSYPDTNYLFTMQTW*SYVTSNRQWRESN
PRSLGLVPQEFQPNQKLSESK*RGVDFGVTVWDHSKYFKEK*TF*KIFTKEIHYKLKINF
VXDADSASGANDVDGASDANDANERMYLXNPL*INKNDETXDQKHKRLX
>GCiWno832_l19.b1_2
FYTLCLLTSYHVCNLFILAWRGNDSRYNTGVLFHTPHTCLQVTTYVTYLSSHGGATTVVI
THVFCLFK*PLFLYVFKIVVLKLFVFFNSRTYI*LITHTG*QRYSSLGKPRTI*A*AISG
TRSNHWGRKSGCK*NVEDFKLGGGKEALSRG*VIQTRTIYLQCKPGKVMLHRTGSGGNRT
RDPLALYPRNFNQTKSFPSQSNAALILGSRCGTTASISKKNKHFRKSSRKKSITS*R*TS
XTTQTAPVAQTTSMAQVTRMTQMRGCIX*THYKSIKMTKQXTRNTNGX
>GCiWno832_l19.b1_3
STPCACLQVTTYVTYLSSHGGATTVVITRVFCFIHLIPAYKLPRM*LIYPRMEGQRQSL*
HTCSVYLNNHCFYTFLR**FSNCLFFLT AELIYNLLLIQADRDTRVWENPEQFEPERFLA
RDPTTGGARVVASETSKILNWGAGKRRCPGAELSRH ELFIYNANLVKLCYIEQAVEGIEP
AIPWPCTPGISTKPKAFRVKVTRR* FWGHGVGPQQVFQRKINILENLHERNPLQAKDKLR
XRRRQRQWRKRRRWRK*RE*RK*EDVFXKPTINQ*K*RNXRPETQTA

>sequence 41, 77 
60% to savignyi ortholog B 57% to ortholog A no ESTs
MLRIFAFASQISMETLLTSAAILTCVLFVVYDTWWRFLGTSGTLRGRN
GFPVFGCFPLLGKNKERVFMNWSRTSYGPIYYARLGASRVLVLNGYEAVREALVLRPQ 297
298 AFAGRCKTELMKLLYEGQHGIMQLDHGPMWKAQRKFGQNALGSLGMGKRSLQ (0)
agtt (1?) QQIVNEFNCLSSTLEXELLANGSKGAYLDEMLWLYAVTNISLLIFNESFDPDNEK (2)
RERFLYLLMYVPFLKNLPLVRQQLNVTIQGRKTKLAKFKQFVENHRQSRDPDDPRDFIDCYLNTMDSKSANDS (2)
FTEKQLLYFMNDLFIAGTETSSNTNSWALLLLLKNPEVMKRLRDEIDSLGREPTL (0)
EDEYKMPYTRAVMQEIFRYRPALPCNI
IPRKTTTSIELNGHSIPAGMPVIANLWSVHHDPVTWAPDPE
TFRPERHLNRDGEFMTSDHVMPFSVGLRSCIGRNLARNELFIFLTSILRRF
NLEFADGCYVDDMTGESGLLLHPPSYKVKGSLRA*

LQW253687.x1 exon 1
LGI470.x1    exon 1 
LQW158767.y1 exon 1
LQW148467.y1 exon 1
DEV30421. y1 exon 1
LQW151162.y1 exon 1
LQW230635.y1 exon 2 probably some errors at 5 prime end exon boundary not right
LQW221856.x1 exon 3 .y1 = 3 prime UTR
LQW148467.x1 exons 3, 4
LQW253687.y1 exons 4, 5 I-helix to k-helix
DEV30421. x1 exon 5 extreme C-term
GCiWno669_a04.b1

>GCiWno669_a04.b1_1
RTFAHQHCTSYKAGRIFLIFNTLYTNQAIACLKPFLSSQEDEYKMPYTRAVMQEIFRYRP
ALPCNI
IPRKTTTSIELNGHSIPAGMPVIANLWSVHHDPVTWAPDPETFRPERHLNRDGE
FMTSDHVMPFSVGLRSCIGRNLARNELFIFLTSILRRFNLEFADGCYVDDMTGESGLLLH
PPSYKVKGSLRA*

Savignyi ortholog A of seq 41 74% to savignyi ortholog A of seq 41
Contiguity verified, not a hybrid. 5 exons 34% to 2R1 fugu 34% to 2C9
MLYLSLFSSNFSIEVVLTCFCLFLLLVYNVRVRHGGTSGTLPGKDGFPIVGCFPMLGKHKE
RVLMKWSTSSLGPMFYIRLGTSKVLVLNGYNAIKEALEQKPLPIAGRVESKFVKMLYDGD
HGLIQLDYGPMWKEQRKFGQTTLGGLGMGKRSFQ (0)
SKIRDEFNCLAATLESELSINGPKGVNFTSMLRLYAANITSSLVFNQTFDSTW (2)
RERFLIQMMYMPWLKYLPIVWKQLALSKRCRRDKVKIFQALVDKHRKSRDPNDPRDFVDCYLNVMEKKQGKNS (2)
SFTEKQLLYYIVDLFLAGTETSANTNAWAILLVLKNPQVKAKLRSELEAFGKSPTL (0)
EDEAKMPYTRAVMQEVFRYRTSARLNIVARRTT
SDLELNGYKVPANMPVIANLWSVHHDPLTWAPDPETFRPERHLDGDGNFIPNDHVMPFSV
GARSCIGKNLAKNEVFIFITSIFSQFDLELADGCHVDNMDGDSGMLLHPPEYRVKGSIRV*

G126P600443R.T0/G126P600443RE8.T0.seq  739 (10) exon 1
G126P617143R.T0/G126P617143RC7.T0.seq  754 (37) exon 1 intron 1
G126P607643R.T0/G126P607643RF1.T0.seq  740 (25) exon 1 intron 1
G126P68887F.T0/G126P68887FA2.T0.seq    731 (13) intron 1 exon 2
G126P66829F.T0/G126P66829FG5.T0.seq    731 (03) exon 2
G126P65769F.T0/G126P65769FF8.T0.seq    695 (05) exon 3
G126P68321F.T0/G126P68321FH4.T0.seq    752 (07) exon 3
G126P66700R.T0/G126P66700RF7.T0.seq    731 (04) intron 3 exon 4
G126P64123F.T0/G126P64123FG2.T0.seq    710 (00) exons 4, 5  
G126P65425R.T0/G126P65425RC9.T0.seq    728 (03) exon 5
G126P69591R.T0/G126P69591RH9.T0.seq    748 (09) exon 5

Savignyi ortholog B of seq 41 this gene is verified and is not a hybrid
74% to savignyi ortholog A of seq 41 5 exons 35% to 2C18, 33% to 2R1 fugu
  1 MLFSSYLTFNFFIESLLAGLCLFLLLVYDVFIRLR 35
 36 GTSGTLPGKDGFPLVGCFPMLGKHKERMLMKWSSSGLGPVFYARLGASRVLVLNGYDVIK  95
 96 EALLQRPLAMAGRVESDLIQELYDGKHGLIQLDHGPLWKEQRKFGQTTLGGLGMGKRSFE 155 (0)
156 SKIVDEFNCFATTLENELNMNEPKGVNLTRMLRLYAANVISSLIFNQTFEISC 208 (2)
209 RERFLILLMYVPGLKNLPIVRQQLAITTRTRLDKVKIFRTLVEEHRKSRDPNEPRDFIDCYLNVLAKNKGENS (2)
    SFTEKQLLYYIADLFLAGTETSATTNAWALLLVLKNPEVKRKLRAELDALGKQPTL (0)
    EDECRMPYTRAVMQEVFRFRPAVPFNI IARKTTSELELKGYKIPAGMPVIANLWSVHH
    DPVTWAPDPEIFRPGRHLDDDGNFVPSNHVIPFSVGARSCIGRNLAKNELFVFITSVLRR
    FDLELADGCHVGDISGDSGMLLHPPKYKVKGFG*

G126P64785F.T0/G126P64785FC9.T0.seq    733 (00) exon 1*
G126P64912F.T0/G126P64912FD2.T0.seq    730 (01) exons 1, 2*
G126P66934F.T0/G126P66934FE3.T0.seq    743 (04) exons 1, 2*
G126P64442F.T0/G126P64442FD9.T0.seq    765 (01) exons 1, 2*
G126P63980F.T0/G126P63980FH9.T0.seq    686 (01) exons 2, 3*
G126P605501F.T0/G126P605501FH8.T0.seq  690 (17) exons 3, 4*
G126P613445F.T0/G126P613445FB9.T0.seq  757 (30) exons 3, 4*
G126P601014R.T0/G126P601014RH9.T0.seq 1019 (08) exon 4*
G126P65053R.T0/G126P65053RF5.T0.seq    709 (02) exon 4*
G126P604759R.T0/G126P604759RC1.T0.seq  977 (18) exon 4*
G126P66827R.T0/G126P66827RA10.T0.seq   689 (03) exon 5*
G126P608906F.T0/G126P608906FH11.T0.seq 724 (29) exon 5*

Savignyi ortholog C of seq 41

    RERFLILLMYVPGVKKLPFVRAQLAITTRTRLDKVKFSRPFGEKHRKSRGPNEPRDFHDCYLNVLAKIKGK (10)
209 RERFLILLMYMPGLKNLPIVRQQLAVTTRTRRNKIKIFQTLVEEHRKSRDPNEPRDFIDCYLNVLEGKKEENR 281
    SFSEKQLLYYIADLYMAGTETSANTNSWALLLVLKNPEVKKKLKAELDALGKQPAL
338 EDECRMPYTRAVMQEVFRFRSALPFNIIARKTTSELKLNGYKIPAGMPVIANLWSVHH 395
396 DSVTWAPDPEIFRPERHLDDDGNFVPSNHVIPFSVGARSCIGRNLAKNELFVFITSILRR 455
456 FDLELADGCHVGDISGDSGMLLHPPKYKVKGSVLM* 490
G126P63984R.T0/G126P63984RE6.T0.seq    728 (00) exon 5
G126P66741R.T0/G126P66741RC12.T0.seq   744 (07) exon 3
G126P611715F.T0/G126P611715FD5.T0.seq  675 (24) exon 5


>scf/ciona01/G126/seq_dir/hrs/G126P64123F.T0/G126P64123FG2.T0.seq    710      0
            710  ABI
            Length = 710

  Plus Strand HSPs:

 Score = 191 (67.2 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
 Identities = 33/56 (58%), Positives = 48/56 (85%), Frame = +2

Query:    43 SFTEKQLLYFMNDLFIAGTETSSNTNSWALLLLLKNPEVMKRLRDEIDSLGREPTL 98
             + +E QLLY++ DLF+AGTETS+NTN+WA+LL+LKNP+V  +LR E+++ G+ PTL
Sbjct:    47 ALSENQLLYYIVDLFLAGTETSANTNAWAILLVLKNPQVKAKLRSELEAFGKSPTL 214

 Score = 112 (39.4 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
 Identities = 21/27 (77%), Positives = 23/27 (85%), Frame = +2

Query:    99 EDEYKMPYTRAVMQEIFRYRPALPCNI 125
             EDE KMPYTRAVMQE+FRYR + P NI
Sbjct:   560 EDEAKMPYTRAVMQEVFRYRTSAPLNI 640
             EDEAKMPYTRAVMQEVFRYRTSAPLNIVARRTTSDLELKGYKVPANMPVI

>scf/ciona01/G126/seq_dir/hrs/G126P66700R.T0/G126P66700RF7.T0.seq    731      0
            731  ABI
            Length = 731

  Plus Strand HSPs:

 Score = 177 (62.3 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
 Identities = 34/41 (82%), Positives = 39/41 (95%), Frame = +3

Query:    43 SALSENQLLYYIVDLFLAGTETSANTNAWAILLVLKNPQVK 83
             S+ +E QLLYYIVDLFLAGTETSANTNAWAILLVLKNP+++
Sbjct:   597 SSFTEKQLLYYIVDLFLAGTETSANTNAWAILLVLKNPRLR 719

 Score = 39 (13.7 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
 Identities = 8/8 (100%), Positives = 8/8 (100%), Frame = +2

Query:    80 PQVKAKLR 87
             PQVKAKLR
Sbjct:   707 PQVKAKLR 730

>scf/ciona01/G126/seq_dir/hrs/G126P66700R.T0/G126P66700RF7.T0.seq    731      0    731  ABI
GAGCTCCATGTGGTGGAATTCCGTGTTTTTTTGACCACTCAAACCAGTGT
TTAACATTTCCGCACTAGTATTGTTGTTAATCAAAATCTCAGGATTAGAT
CGGACAATTTGTTCTACATATTAACAAACTTATTTGTTTGCATCATTATT
GTACCCCATGCTAACCTGTTGTATAGTTTTCTTTCTAGTTTCGACAAGAA
ATTTAACTGGCGTTGCTTAAAACCTGTGGTTTATTAGGTTAAAACTAAGG
TATAAGGATTATCTCAATATCTTAGACAGAACACCGCATAACCTCTGACA
ATCCAAATTTGTTTACTCTGTTTTATGGCAATAAGCGAGTATTATAAGTC
TTTCTCTGCTTTCACCACAACTCATGAAACACCATCCTAGTTGCTATTAT
ATTCTATCCAAGATTATTACAGGGGGTGTTTATAAACTGAAAAATTCCTT
TGTTTTTATTTGCGATGTATAAGGTACGCATTTTATTATTTTGTGCAGTA
ACAAATCAAGCAACAAAGTAGTTTGCTTTAATTTCAATTTAACGTGACTG
ATTTTAATTTCAATGTTATTGTGTTTGTATTGTTTAATTGACTTTTAGCA
GCTTTACGGAGAAACAGCTGTTGTATTACATTGTTGATTTGTTTCTGGCG
GGAACTGAAACTTCGGCTAATACGAACGCCTGGGCGATATTGCTTGTGCT
TAAAAACCCCAGGTTAAGGCAAAGTTAAGAA

>_1
                              ELHVVEFRVFLTTQTSV*HFRTSIVVNQNLRIRSDNLFYILTNLFVCIIIVPHANLLYSF
                              LSSFDKKFNWRCLKPVVY*VKTKV*GLSQYLRQNTA*PLTIQICLLCFMAISEYYKSFSA
                              FTTTHETPS*LLLYSIQDYYRGCL*TEKFLCFYLRCIRYAFYYFVQ*QIKQQSSLL*FQF
                              NVTDFNFNVIVFVLFN*LLAALRRNSCCITLLICFWRELKLRLIRTPGRYCLCLKTPG*G
                              KVKX
                              >_2
                              SSMWWNSVFF*PLKPVFNISALVLLLIKISGLDRTICSTY*QTYLFASLLYPMLTCCIVF
                              FLVSTRNLTGVA*NLWFIRLKLRYKDYLNILDRTPHNL*QSKFVYSVLWQ*ASIISLSLL
                              SPQLMKHHPSCYYILSKIITGGVYKLKNSFVFICDV*GTHFIILCSNKSSNKVVCFNFNL
                              T*LILISMLLCLYCLIDF*QLYGETAVVLHC*FVSGGN*NFG*YERLGDIACA*KPQVKA
                              KLRX
                              >_3
                              APCGGIPCFFDHSNQCLTFPH*YCC*SKSQD*IGQFVLHINKLICLHHYCTPC*PVV*FS
                              F*FRQEI*LALLKTCGLLG*N*GIRIISIS*TEHRITSDNPNLFTLFYGNKRVL*VFLCF
                              HHNS*NTILVAIIFYPRLLQGVFIN*KIPLFLFAMYKVRILLFCAVTNQATK*FALISI*
                              RD*F*FQCYCVCIV*LTFSSFTEKQLLYYIVDLFLAGTETSANTNAWAILLVLKNPRLRQ
                              S*E

>scf/ciona01/G126/seq_dir/hrs/G126P600144F.T0/G126P600144FG4.T0.seq    742
            0    742  ABI
            Length = 742

  Plus Strand HSPs:

 Score = 225 (79.2 bits), Expect = 1.8e-18, P = 1.8e-18
 Identities = 47/53 (88%), Positives = 49/53 (92%), Frame = +2

Query:     9 VFLTTQTSV*HFRTSIVVNQNLRIRSDNLFYILTNLFVCIII-VPHANLLYSF 60
             +F   +TSV*HFRTSIVVNQNLRIRSDNLFYILTNLFVCIII VPHANLLYSF
Sbjct:   410 IF*PLKTSV*HFRTSIVVNQNLRIRSDNLFYILTNLFVCIIIIVPHANLLYSF 568


>scf/ciona01/G126/seq_dir/hrs/G126P600144F.T0/G126P600144FG4.T0.seq    742      0    742  ABI
CGGAGATTGAATCTCGCCCTGTGGTGGAATTCTTTATTCTTTGCTATTTT
TTTCTTTATCATTGCACAAAAATAGCAAAAGATAAACTAAACAAAGTGTA
ACAAAAAATCTAAACTCATATTCTTCTCAGGCGTGAAAGATTCCTGATCC
AAATGATGTACATGCCTTGGTTAAAGTACTTGCCCATTGTTTGGAAACAG
TTGGAGCTTTCGAAACGCTGCAGAAGAGACAAAGTTAAGATTTTCCAGGC
ACTGGTTGACAAGCACCGTAAGTCACGTGACCCCAATGATCCGCGGGATT
TTGTTGACTGCTATTTAAACGTGATGGAGAAAAAGCAAGGGAAAAACAGG
TAACTAATGCACACTAATGGGCTTAAGTTGTAGGTTCACAGCGTGGACGA
AATGGCGTGATTTTTTGACCACTCAAAACCAGTGTTTAACATTTCCGCAC
TAGTATTGTTGTTAATCAAAATCTCAGGATTAGATCGGACAATTTGTTCT
ACATATTAACAAACTTATTTGTTTGCATCATTATTATTGTACCCCATGCT
AACCTGTTGTATAGTTTTCTTTCTAGTTTCGACAAGAAATTTAACTGGCG
TTGCTTAAAACCTGTGGTTTATTAGGTTAAAACTAATTTATAAGGATTAT
CTTAATATCTTATACAGAACACCGCATTAGCTCTGGCAATCCAAATTTGT
TTACTCCGTTTTATGGCGATAAACGAGTATTATAAGTCATTC

>_1
                              RRLNLALWWNSLFFAIFFFIIAQK*QKIN*TKCNKKSKLIFFSGVKDS*SK*CTCLG*ST
                              CPLFGNSWSFRNAAEETKLRFSRHWLTSTVSHVTPMIRGILLTAI*T*WRKSKGKTGN*C
                              TLMGLSCRFTAWTKWRDFLTTQNQCLTFPH*YCC*SKSQD*IGQFVLHINKLICLHHYYC
                              TPC*PVV*FSF*FRQEI*LALLKTCGLLG*N*FIRIILISYTEHRISSGNPNLFTPFYGD
                              KRVL*VIX
                              >_2
                              GD*ISPCGGILYSLLFFSLSLHKNSKR*TKQSVTKNLNSYSSQA*KIPDPNDVHALVKVL
                              AHCLETVGAFETLQKRQS*DFPGTG*QAP*VT*PQ*SAGFC*LLFKRDGEKAREKQVTNA
                              H*WA*VVGSQRGRNGVIF*PLKTSV*HFRTSIVVNQNLRIRSDNLFYILTNLFVCIIIIV
                              PHANLLYSFLSSFDKKFNWRCLKPVVY*VKTNL*GLS*YLIQNTALALAIQICLLRFMAI
                              NEYYKSF
                              >_3
                              EIESRPVVEFFILCYFFLYHCTKIAKDKLNKV*QKI*THILLRRERFLIQMMYMPWLKYL
                              PIVWKQLELSKRCRRDKVKIFQALVDKHRKSRDPNDPRDFVDCYLNVMEKKQGKNR*LMH
                              TNGLKL*VHSVDEMA*FFDHSKPVFNISALVLLLIKISGLDRTICSTY*QTYLFASLLLY
                              PMLTCCIVFFLVSTRNLTGVA*NLWFIRLKLIYKDYLNILYRTPH*LWQSKFVYSVLWR*
                              TSIISH

>scf/ciona01/G126/seq_dir/hrs/G126P69549R.T0/G126P69549RE7.T0.seq    732      0
            732  ABI
            Length = 732

  Minus Strand HSPs:

 Score = 584 (205.6 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
 Identities = 110/110 (100%), Positives = 110/110 (100%), Frame = -1

Query:    11 FILCYFFLYHCTKIAKDKLNKV*QKI*THILLRRERFLIQMMYMPWLKYLPIVWKQLELS 70
             FILCYFFLYHCTKIAKDKLNKV*QKI*THILLRRERFLIQMMYMPWLKYLPIVWKQLELS
Sbjct:   474 FILCYFFLYHCTKIAKDKLNKV*QKI*THILLRRERFLIQMMYMPWLKYLPIVWKQLELS 295

Query:    71 KRCRRDKVKIFQALVDKHRKSRDPNDPRDFVDCYLNVMEKKQGKNR*LMH 120
             KRCRRDKVKIFQALVDKHRKSRDPNDPRDFVDCYLNVMEKKQGKNR*LMH
Sbjct:   294 KRCRRDKVKIFQALVDKHRKSRDPNDPRDFVDCYLNVMEKKQGKNR*LMH 145


>scf/ciona01/G126/seq_dir/hrs/G126P69549R.T0/G126P69549RE7.T0.seq    732      0    732  ABI
NTATCTTGACACTGAAACTCCATGTGGTGNGATTCTTTTGNTTAACAACA
ATACTAGTGCGGAAATGTTAAACACTGGTTTTGAGTGGTCAAAAAATCAC
GCCATTTCGTCCACGCTGTGAACCTACAACTTAAGCCCATTAGTGTGCAT
TAGTTACCTGTTTTTCCCTTGCTTTTTCTCCATCACGTTTAAATAGCAGT
CAACAAAATCCCGCGGATCATTGGGGTCACGTGACTTACGGTGCTTGTCA
ACCAGTGCCTGGAAAATCTTAACTTTGTCTCTTCTGCAGCGTTTCGAAAG
CTCCAACTGTTTCCAAACAATGGGCAAGTACTTTAACCAAGGCATGTACA
TCATTTGGATCAGGAATCTTTCACGCCTGAGAAGAATATGAGTTTAGATT
TTTTGTTACACTTTGTTTAGTTTATCTTTTGCTATTTTTGTGCAATGATA
AAGAAAAAAATAGCAAAGAATAAAAATATAAAATAGACGGCAAAACTACA
GTAATAAATATACAAATATATAAAGATGGTATGACAAAGGAAAATAAACG
TCCGGCCCGTTGGTCTACGTTTTAAAGTGCGTCGCCTTTCAATCGAAAGG
TTGCAGGTGCGAAACTGGTCGCTAGCCAGTCGGTTGTGTCATTGGGCAAG
CCACTTTACGGACATTGCCTGAACCCAGCGGATAAATGGTTTCTACCAAA
TTAAAGTAACGTGTCTATCACATACAACACAC

>_4
                              VCCM**TRYFNLVETIYPLGSGNVRKVACPMTQPTG*RPVSHLQPFD*KATHFKT*TNGP
                              DVYFPLSYHLYIFVYLLL*FCRLFYIFILCYFFLYHCTKIAKDKLNKV*QKI*THILLRR
                              ERFLIQMMYMPWLKYLPIVWKQLELSKRCRRDKVKIFQALVDKHRKSRDPNDPRDFVDCY
                              LNVMEKKQGKNR*LMHTNGLKL*VHSVDEMA*FFDHSKPVFNISALVLLLXKRIXPHGVS
                              VSRX
                              >_5
                              VLYVIDTLL*FGRNHLSAGFRQCP*SGLPNDTTDWLATSFAPATFRLKGDAL*NVDQRAG
                              RLFSFVIPSLYICIFITVVLPSILYFYSLLFFSLSLHKNSKR*TKQSVTKNLNSYSSQA*
                              KIPDPNDVHALVKVLAHCLETVGAFETLQKRQS*DFPGTG*QAP*VT*PQ*SAGFC*LLF
                              KRDGEKAREKQVTNAH*WA*VVGSQRGRNGVIF*PLKTSV*HFRTSIVVXQKNXTTWSFS
                              VKIX
                              >_6
                              CVVCDRHVTLIW*KPFIRWVQAMSVKWLAQ*HNRLASDQFRTCNLSIERRRTLKRRPTGR
                              TFIFLCHTIFIYLYIYYCSFAVYFIFLFFAIFFFIIAQK*QKIN*TKCNKKSKLIFFSGV
                              KDS*SK*CTCLG*STCPLFGNSWSFRNAAEETKLRFSRHWLTSTVSHVTPMIRGILLTAI
                              *T*WRKSKGKTGN*CTLMGLSCRFTAWTKWRDFLTTQNQCLTFPH*YCC*XKESHHMEFQ
                              CQDX

>_4
                              DLKSVDR*WYRIQPLVIRQINSRPSSGYRSDCSVLYVIDTLL*FGRNHLSAGFRQCP*SG
                              LPNDTTDWLATSFAPATFRLKGDALKR*TNGPDVYFPLSYHLYIFVYLLL*FCRLFYIFI
                              LCYFFLYHCTKIAKDKLNKV*QKI*THILLRRERFLIQMMYMPWLKYLPIVWKQLELSKR
                              CRRDKVKIFQALVDKHRKSRDPNDPRDFVDCYLNVMEKKQGKNR*LMHTNGLKV*NXHXQ
                              KRMXSVXKVS
                              >_5
                              RS*VSR*VVVSNPAAGYTSDQLAPIVGLPERLQCVVCDRHVTLIW*KPFIRWVQAMSVKW
                              LAQ*HNRLASDQFRTCNLSIERRRT*TLDQRAGRLFSFVIPSLYICIFITVVLPSILYFY
                              SLLFFSLSLHKNSKR*TKQSVTKNLNSYSSQA*KIPDPNDVHALVKVLAHCLETVGAFET
                              LQKRQS*DFPGTG*QAP*VT*PQ*SAGFC*LLFKRDGEKAREKQVTNAH*WA*GVEXPPT
                              KTXXFSXQSVX
                              >_6
                              EILSQSIGSGIESSRWLYVRSTRAHRRVTGAIAVCCM**TRYFNLVETIYPLGSGNVRKV
                              ACPMTQPTG*RPVSHLQPFD*KATHLNVRPTGRTFIFLCHTIFIYLYIYYCSFAVYFIFL
                              FFAIFFFIIAQK*QKIN*TKCNKKSKLIFFSGVKDS*SK*CTCLG*STCPLFGNSWSFRN
                              AAEETKLRFSRHWLTSTVSHVTPMIRGILLTAI*T*WRKSKGKTGN*CTLMGLRCRIXTX
                              KNX*XQXPKCL

>_1
                              SFRYCISPCGGIPQLTPQ*ICCFLNRFIENIRLNPW*KNALTQATGKRGVLSPVVLII*P
                              NSSKRFVCLVSPIG*ITGRK*KSC*LKTLLQLVSCVVVRRT*LESSKLN*PNSLIIKTFG
                              DLKSVDRLWYRIKPLVIRQITSRLSSGYRSYCGVLYMIDTFLQFGRTHLSAGFKQCP*SA
                              LPNDTTNWLATSFAPATFRLKGDALXTLDQRARAFIFLCHTIFI*LYIYYCSXAXYFIXL
                              FFAIXFFIX
                              >_2
                              AFATVSRPVVEFHSSLHSRYVVF*IDL*KTYA*ILGRKMH*HKRLASEGF*AQLF*LYDQ
                              TLQKDSFASLVQSVK*LVESKKVVN*KPSSS*SVVSL*EELSLNPVS*TDRIA*SLRPLE
                              ILSQSIGCGIESSRWLYVRSPRAYRRVTGAIAVCCI**TRSFNLVEPIYPLVSSNVRKVP
                              CPMTQPTG*RPVSHLQPFD*KATHXKR*TNGPGRLFSFVIPSLYSCIFTTVVXPXILYXY
                              SLLXXSLSX
                              >_3
                              LSLLYLALWWNSTAHSTVDMLFFK*IYRKHTLKSLVEKCINTSDWQARGFKPSCSDYMTK
                              LFKKIRLPR*SNRLNNWSKVKKLLIKNPPPASQLCRCEKNLA*IQ*VKLTE*PNH*DLWR
                              S*VSR*VVVSNQAAGYTSDHLAPIVGLPELLRCVVYDRHVPSIW*NPFIRWFQAMSVKCL
                              AQ*HNQLASDQFRTCNLSIERRRTXNVRPTGPGVYFPLSYHLYIAVYLLL*XCRLFYIXI
                              LCYXFLYQ

>_1
                              NLDTETPCGGILTFCHTTVLTRV*LFFHTRGDQHKHPTVN*YISNYFSPKFEMSSTVLQR
                              PWKAN*VSTDQRE*ISLPCYGFTLQI*PHP*FSTKHLTVLGLRTLFHSSLHSRYVVF*ID
                              L*KTYA*ILGRKMH*HKRLASEGF*AQLF*LYDQTLQKDSFASLVQSVK*LVESKKVVN*
                              KPSSS*SVVSL*EELSLNPVS*TDRIA*SLRPLEILSQSIGCGIESSRWLYVRSPRAX
                              >_2
                              TWTLKLHVVXF*PFATRPY*RVCSYFFTPAGTNISTLPSINTYRIISVQNSR*VQLSCSD
                              LGKRTKYQRTKGSEFHFHATALRCKYNLIPSFQPNI*QYLV*GRYSTAHSTVDMLFFK*I
                              YRKHTLKSLVEKCINTSDWQARGFKPSCSDYMTKLFKKIRLPR*SNRLNNWSKVKKLLIK
                              NPPPASQLCRCEKNLA*IQ*VKLTE*PNH*DLWRS*VSR*VVVSNQAAGYTSDHLAP
                              >_3
                              LGH*NSMWWXSNLLPHDRTNACVVIFSHPRGPT*APYRQLIHIELFQSKIRDEFNCLAAT
                              LESELSINGPKGVNFTSMLRLYAANITSSLVFNQTFDSTWFEDAIPQLTPQ*ICCFLNRF
                              IENIRLNPW*KNALTQATGKRGVLSPVVLII*PNSSKRFVCLVSPIG*ITGRK*KSC*LK
                              TLLQLVSCVVVRRT*LESSKLN*PNSLIIKTFGDLKSVDRLWYRIKPLVIRQITSR

>_1
                              IFAXLYPPFLWXDSYSLTTRIIL*RSMISK*FLSIDRMIKTSK*KV*LFLV*LDTMDAV*
                              TQWLTC*TKIE*MSQSYLTHYNSFTNQIAVIILRPGL*FFELG*SSNP**ALC*DGFSIY
                              NIRYMYIGLVNHFATQPY*RVCSYFSTHAGTNMSTLPSINT*RIISVQNSR*VQLSCSDL
                              GKRTKYQRTKGE*ISLPCYGFTLQI*SHP*FSTKHLTVLWF*XTLFHSSLHSDNVWFF*I
                              DL*X
                              >_2
                              SLRYCILRSCGXIHIALPLELFYNVP*SPSSSFR*IV*LKQANKRFSCSWSS*TQWTLSE
                              PSG*RVELKLNKCRNHI*HTTIASLTKLL*LF*DRVCNFLNWVDLLTHNRPFAKTGFLYI
                              IYGICISASLTILPHNRINACVVIFPHTRGQT*APYRQLIHSELFQSKIRDEFNCLAATL
                              ESELSINGPKGSEFHFHATALRCKYNLIPSFQPNI*QYFGFXGRYSTAHSTVIMFGFFK*
                              IYRX
                              >_3
                              LCXTVSSVPVVXFI*PYH*NYSITFHDLQVVPFDRSYD*NKQIKGLVVLGLARHNGRCLN
                              PVVNVLN*N*INVAIIFNTLQ*LH*PNCCDYFKTGSVIF*IGLIF*PIIGPLLRRVFYI*
                              YTVYVYRPR*PFCHTTVLTRV*LFFHTRGDKHEHPTVN*YIANYFSPKFEMSSTVLQRPW
                              KAN*VSTDQRGVNFTSMLRLYAANIISSLVFNQTFDSTLVLXDAIPQLTPQ**CLVFLNR
                              FIE

>scf/ciona01/G126/seq_dir/hrs/G126P64785F.T0/G126P64785FC9.T0.seq    733      0
            733  ABI
            Length = 733

  Minus Strand HSPs:
Realted exon 
 Score = 155 (54.6 bits), Expect = 4.8e-11, P = 4.8e-11
 Identities = 30/39 (76%), Positives = 33/39 (84%), Frame = -3

Query:    14 SKIRDEFNCLAATLESELSINGPKGVNFTSMLRLYAANI 52
             SKI DEFNCLA TLE+EL +NGPKGV  T MLRLYAAN+
Sbjct:   170 SKIVDEFNCLATTLETELKMNGPKGVTLTHMLRLYAANV 54



>scf/ciona01/G126/seq_dir/hrs/G126P64123F.T0/G126P64123FG2.T0.seq    710      0    710  ABI
GACTGCGGGTATGAAATCTNCTTTCTGTGGTGGAATATCCCTTTTAGCGC
TTTCGGAGAATCAGCTGTTGTATTACATCGTTGATTTGTTTCTGGCGGGA
ACGGAGACTTCGGCTAATACGAACGCCTGGGCGATATTGCTTGTGCTTAA
AAATCCCCAGGTTAAGGCAAAGTTAAGATCAGAGTTGGAGGCCTTTGGAA
AGTCCCCGACCTTGGTACGTTTAAATGGGATTTTTAACTCTTTTTGTTTA
CTAACCTATAAATCTGGAAAAAAGTTATTACACAACCTGTAGTTATAACA
TGCAGCCTTTTAACCTATGTACAATATTAAACGAGGCCGACTGTCCCTAA
ACTAGGACCAAAGCGGATGTTGTCAGTTACACAAATTGCTACGTTAATTA
AGCTGTTTGCACAAAAAATCTGACGCTCCTGCGATTTCTTAAAAAAATTA
GATCCTATTCTATGTTTTATATGGATATATAGGTTTTATGTGGGTTACAC
TCATTGTATATATACGTACTTTAATAGAACAAAAATAAAATTGCAATCAT
TACAATCAGGAGGACGAAGCAAAAATGCCTTACACAAGAGCTGTGATGCA
AGAAGTTTTTCGCTACAGAACATCCGCCCCTTTAAATATTGTTGCAAGAA
GAACGACAAGCGACCTTGAATTGAAGGGTTACAAGGTACCAGCTAATATG
CCGGTAATTG

>_1
                              DCGYEIXFLWWNIPFSAFGESAVVLHR*FVSGGNGDFG*YERLGDIACA*KSPG*GKVKI
                              RVGGLWKVPDLGTFKWDF*LFLFTNL*IWKKVITQPVVITCSLLTYVQY*TRPTVPKLGP
                              KRMLSVTQIATLIKLFAQKI*RSCDFLKKLDPILCFIWIYRFYVGYTHCIYTYFNRTKIK
                              LQSLQSGGRSKNALHKSCDARSFSLQNIRPFKYCCKKNDKRP*IEGLQGTS*YAGNX
                              >_2
                              TAGMKSXFCGGISLLALSENQLLYYIVDLFLAGTETSANTNAWAILLVLKNPQVKAKLRS
                              ELEAFGKSPTLVRLNGIFNSFCLLTYKSGKKLLHNL*L*HAAF*PMYNIKRGRLSLN*DQ
                              SGCCQLHKLLR*LSCLHKKSDAPAIS*KN*ILFYVLYGYIGFMWVTLIVYIRTLIEQK*N
                              CNHYNQEDEAKMPYTRAVMQEVFRYRTSAPLNIVARRTTSDLELKGYKVPANMPVIX
                              >_3
                              LRV*NLLSVVEYPF*RFRRISCCITSLICFWRERRLRLIRTPGRYCLCLKIPRLRQS*DQ
                              SWRPLESPRPWYV*MGFLTLFVY*PINLEKSYYTTCSYNMQPFNLCTILNEADCP*TRTK
                              ADVVSYTNCYVN*AVCTKNLTLLRFLKKIRSYSMFYMDI*VLCGLHSLYIYVL**NKNKI
                              AIITIRRTKQKCLTQEL*CKKFFATEHPPL*ILLQEERQATLN*RVTRYQLICR*L

>scf/ciona01/G126/seq_dir/hrs/G126P69591R.T0/G126P69591RH9.T0.seq    748      0
            748  ABI
            Length = 748

  Minus Strand HSPs:

 Score = 248 (87.3 bits), Expect = 6.7e-21, P = 6.7e-21
 Identities = 49/50 (98%), Positives = 49/50 (98%), Frame = -3

Query:     1 EDEAKMPYTRAVMQEVFRYRTSAPLNIVARRTTSDLELKGYKVPANMPVI 50
             EDEAKMPYTRAVMQEVFRYRTSAPLNIVARRTTSDLEL GYKVPANMPVI
Sbjct:   665 EDEAKMPYTRAVMQEVFRYRTSAPLNIVARRTTSDLELNGYKVPANMPVI 516

>scf/ciona01/G126/seq_dir/hrs/G126P69591R.T0/G126P69591RH9.T0.seq    748      0    748  ABI
AGACTTGAGGCTGAAAACCCACTCTTGTGGNAATTCTATAATACCATACC
ATTTTATTTATTATTTAGCAAGTTATATTGCGATTATTCAAATAAATACA
GCTTGGAATTCAATAAGTATAACACATTGTTCTTTTTATAATATAACGAA
GCAATAAAATGCTCTCGTGGCCGTTGTAATATACAGCAAAATTATAACAC
TTATTACACACGAATAGAACCCTTCACTCTATATTCTGGTGGGTGCAGCA
ACATGCCGCTATCTCCATCCATATTATCAACGTGGCAACCATCTGCTAGT
TCTAGGTCAAATTGACTAAAAATTGAAGTTATGAAAATAAACACTTCGTT
TTTAGCGAGGTTCTTTCCAATGCATGATCTTGCGCCCACCGAGAACGGCA
TCACGTGATCGTTTGGTATGAAATTCCCATCGCCATCCAGATGTCGTTCA
GGTCTGAATGTTTCTGGGTCTGGTGCCCATGTCAATGGGTCGTGATGTAC
CGACCACAGGTTTGCAATTACCGGCATATTAGCTGGTACCTTGTAACCGT
TCAATTCAAGGTCGCTTGTCGTTCTTCTTGCAACAATATTTAAAGGGGCG
GATGTTCTGTAGCGAAAAACTTCTTGCATCACAGCTCTTGTGTAAGGCAT
TTTTGCTTCGTCCTCCTGATTGTAATGATTGCAATNNTATTTTTGTTCTA
TTAAAGTACGTATATATACAATGAGTGTAACCCACATAAAACCTATAN

>_4
                              YRFYVGYTHCIYTYFNRTKIXLQSLQSGGRSKNALHKSCDARSFSLQNIRPFKYCCKKND
                              KRP*IERLQGTS*YAGNCKPVVGTSRPIDMGTRPRNIQT*TTSGWRWEFHTKRSRDAVLG
                              GRKIMHWKEPR*KRSVYFHNFNF*SI*PRTSRWLPR**YGWR*RHVAAPTRI*SEGFYSC
                              VISVIILLYITTATRAFYCFVIL*KEQCVILIEFQAVFI*IIAI*LAK**IKWYGIIEXP
                              QEWVFSLKS
                              >_5
                              X*VLCGLHSLYIYVL**NKNXIAIITIRRTKQKCLTQEL*CKKFFATEHPPL*ILLQEER
                              QATLN*TVTRYQLICR*LQTCGRYITTH*HGHQTQKHSDLNDIWMAMGISYQTIT*CRSR
                              WAQDHALERTSLKTKCLFS*LQFLVNLT*N*QMVATLIIWMEIAACCCTHQNIE*RVLFV
                              CNKCYNFAVYYNGHESILLLRYIIKRTMCYTY*IPSCIYLNNRNITC*IINKMVWYYRIX
                              TRVGFQPQVX
                              >_6
                              IGFMWVTLIVYIRTLIEQKXXCNHYNQ EDEAKMPYTRAVMQEVFRYRTSAPLNIVARRTT
                              SDLELNGYKVPANMPVIANLWSVHHDPLTWAPDPETFRPERHLDGDGNFIPNDHVMPFSV
                              GARSCIGKNLAKNEVFIFITSIFSQFDLELADGCHVDNMDGDSGMLLHPPEYRVKGSIRV
                              **VL*FCCILQRPREHFIASLYYKKNNVLYLLNSKLYLFE*SQYNLLNNK*NGMVL*NXH
                              KSGFSASSL

Related gene in FID exon may be identical with poor seq quality
LQW221856.x1 
LQW221856.x1.phd.1 LQW221856.y1 

           11:19:58 2001 TEMPLATE: LQW221856 DIRECTION: fwd
          Length = 930

 Score =  108 bits (247), Expect = 1e-23
 Identities = 35/42 (83%), Positives = 35/42 (83%)
 Frame = +1

Query: 1   RKPTLAKFKQFGENHRQSRDPDDPPDFIDCNQKTMDSKSAND 42
           RK  LAKFKQF ENHRQSRDPDDP DFIDC   TMDSKSAND
Sbjct: 364 RKTKLAKFKQFVENHRQSRDPDDPRDFIDCYLNTMDSKSAND 489

>LQW221856.x1
>lcl|LQW221856.x1 CHROMAT_FILE: LQW221856.x1 PHD_FILE: LQW221856.x1.phd.1 CHEM:
term DYE: ET TIME: Mon Aug 27 11:19:58 2001 TEMPLATE: LQW221856 DIRECTION: fwd 
NTACACGGGTTCGAAGCTGTAATAGACCTATTTTGATGATATTTTTTTTAACATAATGAACCCATGCAGGTTGTCCAAGT

TGTCAGCCATCCATTTACAAAAAACAAACAATAAATAAATATCCCCCTTCTCGGTAACTCGTAAGTTACATATACGCGGT

AGCTCGTAAGCAAGCACGATATGTATAAAACAGAACACCGGTGTTATGACGACTGACGTTGCCCGGTATGTGAGGATAAA

CAAGTTATACCTTTTTTTAATCAATGTTTCAGACGCGAGAGATTCCTGTACCTTCTCATGTACGTTCCGTTTCTGAAGAA

TCTGCCGTTGGTTCGACAACAGCTCAATGTTACCATACAAGGACGAAAAACCAAACTTGCAAAGTTCAAACAATTTGTTG

AAAATCATCGACAATCACGTGACCCGGACGACCCCCGTGACTTTATAGACTGTTACCTAAATACAATGGACAGTAAATCG

GCTAACGACAGGTTGGTTGCTTGTGTTTTTATTTATTCTATATTACAGTAAGGGCACATCACATACAAAACCCGTTGTGG

TAAAGACATCTTGCTAAATCGGGTATAACTTGTACTTACATTCCTAATCTTACTGTAAGACTTATACTATAAGGGCGACG

TTTTTTGGCGTAGCACGATTGAGACCTTATGGTGTAGTAGACTTAAATGCTTGCGTCTACTGATTTCTTTATAGTGAGCT

GTATCGGCCCTAGCTTGATCCTGTGTACTTAGCCGGTTGACTATGCCCAATCGTCTAAATATCCACCGGCCATCTTGAGT

GATCTAACTGTTCGTACCAGTCCGAAACAGCCTTTTTGGAGCTGTTGGGGGCGGATTCCCAAGTGGGCTGGTGGGAACGC

GCGAGGTGGGAAATCCGGGACCGTGGTTACGCGCCAAGTCGTGTGTGGGA

>_1
                              XHGFEAVIDLF**YFF*HNEPMQVVQVVSHPFTKNKQ*INIPLLGNS*VTYTR*LVSKHD
                              MYKTEHRCYDD*RCPVCEDKQVIPFFNQCFRRERFLYLLMYVPFLKNLPLVRQQLNVTIQ
                              GRKTKLAKFKQFVENHRQSRDPDDPRDFIDCYLNTMDSKSANDRLVACVFIYSILQ*GHI
                              TYKTRCGKDILLNRV*LVLTFLILL*DLYYKGDVFWRSTIETLWCSRLKCLRLLISL**A
                              VSALA*SCVLSRLTMPNRLNIHRPS*VI*LFVPVRNSLFGAVGGGFPSGLVGTREVGNPG
                              PWLRAKSCVG
                              >_2
                              YTGSKL**TYFDDIFFNIMNPCRLSKLSAIHLQKTNNK*ISPFSVTRKLHIRGSS*ASTI
                              CIKQNTGVMTTDVARYVRINKLYLFLINVSDARDSCTFSCTFRF*RICRWFDNSSMLPYK
                              DEKPNLQSSNNLLKIIDNHVTRTTPVTL*TVT*IQWTVNRLTTGWLLVFLFILYYSKGTS
                              HTKPVVVKTSC*IGYNLYLHS*SYCKTYTIRATFFGVARLRPYGVVDLNACVY*FLYSEL
                              YRP*LDPVYLAG*LCPIV*ISTGHLE*SNCSYQSETAFLELLGADSQVGWWERARWEIRD
                              RGYAPSRVW
                              >_3
                              TRVRSCNRPILMIFFLT**THAGCPSCQPSIYKKQTINKYPPSR*LVSYIYAVARKQARY
                              V*NRTPVL*RLTLPGM*G*TSYTFF*SMFQTREIPVPSHVRSVSEESAVGSTTAQCYHTR
                              TKNQTCKVQTIC*KSSTIT*PGRPP*LYRLLPKYNGQ*IG*RQVGCLCFYLFYITVRAHH
                              IQNPLW*RHLAKSGITCTYIPNLTVRLIL*GRRFLA*HD*DLMV**T*MLASTDFFIVSC
                              IGPSLILCT*PVDYAQSSKYPPAILSDLTVRTSPKQPFWSCWGRIPKWAGGNARGGKSGT
                              VVTRQVVCG

>LQW221856.y1
>lcl|LQW221856.y1 CHROMAT_FILE: LQW221856.y1 PHD_FILE: LQW221856.y1.phd.1 CHEM:
term DYE: ET TIME: Mon Aug 27 11:20:28 2001 TEMPLATE: LQW221856 DIRECTION: rev 
AGATTGAATGAGCCGGTACCAACGCCGATCCAACTACGCTGGTCTTACATCTGCCTGTAATGCGTTAACGATCCAGTGGC

AAAAGCAATCAACGGAAAACTGTGTCCTCGCTCCCCGGGGGGTCGTTAAAGCTGTGGTCGAAGACGGGGAGAAACAAGGA

CAACCCTTCAAGCTTACGTTGTTTCGCTACATTGGGTTGTATTCCTTGTGTCTTGGACGAGACAATCTTTTCCACCTCTA

TCCTTGATCGTGGAACCCTCACTTGGCTCCTGTCTAATTAATAATTAACGCCTTTGCTGACTGTAAGGTGCTTTGTCGTT

ATCTACGACTATAATTCGGGTGTTGCAGCAAGGTAAAGGCGTGATCAAAATTGCCTTTGCTTGCTACTTTAAGATTGTTA

TCATTTGGAAATCCGAGATTTCAATCTCCAGAATTTATTGAGACTTTGAAGACTAATAGTAAATTTTGGCAAATACTATT

ACGACACCGTTTTTTTTTTCCATAATATATGCGCGTACTTGAGCAAGAACCACCTGTGACGTAACGGAATAAATTTAATG

AAGATAATTCGAAACGGGTATCATTGTAAACAGAAAAATTGATATTATTAGATTTAGCTTATAGTACAGGCTATCTGTGT

ACGCCGATTATACATTTTGACCACAGTTAATAATTTATAGGGAAGTACAATTTTTTTTCTAGTGTTTTCGGTGTCTGTAC

ATTTAACATGGTTTCACAAATAAACAAGATCTTATAATTGCAGGCTGTAATATAGCTGGGTGTGCAGTAGTATTCAAGCA

GTGTATATGTATTGCACATTTCCCCTAATTAATATTCATCAAATTAAAGCGATTGTATCTACCGGTAAGGATCCTAACCA

AGCCCTTTAAAATTGGATACCCGGTGAAATAACGGGTTCACAAAGTTAAGTAAAAAAACGGTATCTCGCAGGGAAGCTTT

CGG

>_1
                              RLNEPVPTPIQLRWSYICL*CVNDPVAKAINGKLCPRSPGGR*SCGRRRGETRTTLQAYV
                              VSLHWVVFLVSWTRQSFPPLSLIVEPSLGSCLINN*RLC*L*GALSLSTTIIRVLQQGKG
                              VIKIAFACYFKIVIIWKSEISISRIY*DFED***ILANTITTPFFFSIIYART*ARTTCD
                              VTE*I**R*FETGIIVNRKIDIIRFSL*YRLSVYADYTF*PQLIIYREVQFFF*CFRCLY
                              I*HGFTNKQDLIIAGCNIAGCAVVFKQCICIAHFP*LIFIKLKRLYLPVRILTKPFKIGY
                              PVK*RVHKVK*KNGISQGSFR
                              >_2
                              D*MSRYQRRSNYAGLTSACNALTIQWQKQSTENCVLAPRGVVKAVVEDGEKQGQPFKLTL
                              FRYIGLYSLCLGRDNLFHLYP*SWNPHLAPV*LIINAFADCKVLCRYLRL*FGCCSKVKA
                              *SKLPLLATLRLLSFGNPRFQSPEFIETLKTNSKFWQILLRHRFFFP*YMRVLEQEPPVT
                              *RNKFNEDNSKRVSL*TEKLILLDLAYSTGYLCTPIIHFDHS**FIGKYNFFSSVFGVCT
                              FNMVSQINKIL*LQAVI*LGVQ*YSSSVYVLHISPN*YSSN*SDCIYR*GS*PSPLKLDT
                              R*NNGFTKLSKKTVSRREAF
                              >_3
                              IE*AGTNADPTTLVLHLPVMR*RSSGKSNQRKTVSSLPGGSLKLWSKTGRNKDNPSSLRC
                              FATLGCIPCVLDETIFSTSILDRGTLTWLLSN**LTPLLTVRCFVVIYDYNSGVAAR*RR
                              DQNCLCLLL*DCYHLEIRDFNLQNLLRL*RLIVNFGKYYYDTVFFFHNICAYLSKNHL*R
                              NGINLMKIIRNGYHCKQKN*YY*I*LIVQAICVRRLYILTTVNNL*GSTIFFLVFSVSVH
                              LTWFHK*TRSYNCRL*YSWVCSSIQAVYMYCTFPLINIHQIKAIVSTGKDPNQAL*NWIP
                              GEITGSQS*VKKRYLAGKLS
                              >_4
                              PKASLRDTVFLLNFVNPLFHRVSNFKGLG*DPYR*IQSL*FDEY*LGEMCNTYTLLEYYC
                              TPSYITACNYKILFICETMLNVQTPKTLEKKLYFPINY*LWSKCIIGVHR*PVL*AKSNN
                              INFSVYNDTRFELSSLNLFRYVTGGSCSSTRIYYGKKKRCRNSICQNLLLVFKVSINSGD
                              *NLGFPNDNNLKVASKGNFDHAFTLLQHPNYSRR*RQSTLQSAKALIIN*TGAK*GFHDQ
                              G*RWKRLSRPRHKEYNPM*RNNVSLKGCPCFSPSSTTALTTPRGARTQFSVDCFCHWIVN
                              ALQADVRPA*LDRRWYRLIQS
                              >_5
                              ESFPARYRFFT*LCEPVISPGIQF*RAWLGSLPVDTIALI**ILIRGNVQYIYTA*ILLH
                              TQLYYSLQL*DLVYL*NHVKCTDTENTRKKIVLPYKLLTVVKMYNRRTQIACTIS*I**Y
                              QFFCLQ*YPFRIIFIKFIPLRHRWFLLKYAHILWKKKTVS**YLPKFTISLQSLNKFWRL
                              KSRISK**QS*SSKQRQF*SRLYLAATPEL*S*ITTKHLTVSKGVNY*LDRSQVRVPRSR
                              IEVEKIVSSKTQGIQPNVAKQRKLEGLSLFLPVFDHSFNDPPGSEDTVFR*LLLPLDR*R
                              ITGRCKTSVVGSALVPAHSIX
                              >_6
                              RKLPCEIPFFYLTL*TRYFTGYPILKGLVRILTGRYNRFNLMNIN*GKCAIHIHCLNTTA
                              HPAILQPAIIRSCLFVKPC*MYRHRKH*KKNCTSL*IINCGQNV*SAYTDSLYYKLNLII
                              SIFLFTMIPVSNYLH*IYSVTSQVVLAQVRAYIMEKKNGVVIVFAKIYY*SSKSQ*ILEI
                              EISDFQMITILK*QAKAILITPLPCCNTRIIVVDNDKAPYSQQRR*LLIRQEPSEGSTIK
                              DRGGKDCLVQDTRNTTQCSETT*A*RVVLVSPRLRPQL*RPPGERGHSFPLIAFATGSLT
                              HYRQM*DQRSWIGVGTGSFNL

LQW230635.x1 for walking toward C-term 
LQW230635.x1.phd.1 LQW230635.y1 

           11:19:26 2001 TEMPLATE: LQW230635 DIRECTION: fwd
          Length = 900

 Score =  177 bits (410), Expect = 3e-44
 Identities = 56/60 (93%), Positives = 56/60 (93%)
 Frame = -1

Query: 1   TPSYITACNYKILFICETMLNVQTPKTLEKKLYFPINY*LWSKCIIGVHR*PVL*AKSNN 60
           TPSYIT CNYKILFICET L VQ PKTLEKKLYFPINY*LWSKCIIGVHR*PVL*AKSNN
Sbjct: 399 TPSYITPCNYKILFICETILIVQIPKTLEKKLYFPINY*LWSKCIIGVHR*PVL*AKSNN 220

>LQW230635.x1
>lcl|LQW230635.x1 CHROMAT_FILE: LQW230635.x1 PHD_FILE: LQW230635.x1.phd.1 CHEM:
term DYE: ET TIME: Mon Aug 27 11:19:26 2001 TEMPLATE: LQW230635 DIRECTION: fwd 
TGCTGTAAGATTGTTATCATTTGGAAATCCGAGATTTCAATCTCCAGAATGTATTGAGACTTTGAAGACTAATAGTAAAT

TTTGGCAAATACTATTACGACACCGTTTTTTTTTTCCATAATATATGCGCGTACTTGAGCAAGAACCACCTGTGACGTAA

CGGAATAAATTTAATGAAGATAATTCGAAACGGGTATCATTGTAAACAGAAAAAATGATATTATTAGATTTAGCTTATAG

TACAGGCTATCTGTGTACGCCGATTATACATTTTGACCACAGTTAATAATTTATAGGGAAGTACAATTTTTTTTCTAGTG

TTTTTGGTATCTGTACAATTAAAATGGTTTCACAAATAAACAAGATCTTATAATTGCAGGGTGTTATATAGCTTGGTGTG

CAGTAGTATTCAAGCAGTGTATATGTATTGCAAATAATCAAATAAATAATAATTTAATCAAACTACAGCCGATTGTATCT

TACTTGTTATAGTAATCTAAATCCAAACACCTATTAAAATAATTGAATAACCAGCTGCGATATACAAGCGGTGTACGAAG

AAAAGCTTAAATAAATAAAATAATCGTATATGCATCTGCAATTGGAAAAGTCCATGTCTCTGGGCATATGTCCAACGTGG

GTAACTACGCCCGAAGTGAACCCTCACTTATAAGGTGGTGGTTGAAGTACAAACACTTCACCGTCAATCTTCGGTTAAAA

CCACAGGGAACCTAATGAACCCCTTAAATGACTCGGACTGAAGGTCTCCCGCAATGGACAGGTGACCGCCGATAGAGGGC

CGGGCGTCGCTAAACCCCAGGGAAGTACCGAAATTGGCGGCACAGGGAGTATACATGTGAGAAGGTTAGAACGGCGCAGA

ATGAGCGACACAGGACCGAG

>_4
                              LGPVSLILRRSNLLTCILPVPPISVLPWGLATPGPLSAVTCPLRETFSPSHLRGSLGSLW
                              F*PKIDGEVFVLQPPPYK*GFTSGVVTHVGHMPRDMDFSNCRCIYDYFIYLSFSSYTACI
                              SQLVIQLF**VFGFRLL*QVRYNRL*FD*IIIYLIICNTYTLLEYYCTPSYITPCNYKIL
                              FICETILIVQIPKTLEKKLYFPINY*LWSKCIIGVHR*PVL*AKSNNIIFSVYNDTRFEL
                              SSLNLFRYVTGGSCSSTRIYYGKKKRCRNSICQNLLLVFKVSIHSGD*NLGFPNDNNLTA
                              >_5
                              RSCVAHSAPF*PSHMYTPCAANFGTSLGFSDARPSIGGHLSIAGDLQSESFKGFIRFPVV
                              LTED*R*SVCTSTTTL*VRVHFGRSYPRWTYAQRHGLFQLQMHIRLFYLFKLFFVHRLYI
                              AAGYSIILIGVWI*ITITSKIQSAVV*LNYYLFDYLQYIYTA*ILLHTKLYNTLQL*DLV
                              YL*NHFNCTDTKNTRKKIVLPYKLLTVVKMYNRRTQIACTIS*I**YHFFCLQ*YPFRII
                              FIKFIPLRHRWFLLKYAHILWKKKTVS**YLPKFTISLQSLNTFWRLKSRISK**QSYSX
                              >_6
                              SVLCRSFCAVLTFSHVYSLCRQFRYFPGV*RRPALYRRSPVHCGRPSVRVI*GVH*VPCG
                              FNRRLTVKCLYFNHHLISEGSLRA*LPTLDICPETWTFPIADAYTIILFI*AFLRTPLVY
                              RSWLFNYFNRCLDLDYYNK*DTIGCSLIKLLFI*LFAIHIHCLNTTAHQAI*HPAIIRSC
                              LFVKPF*LYRYQKH*KKNCTSL*IINCGQNV*SAYTDSLYYKLNLIISFFLFTMIPVSNY
                              LH*IYSVTSQVVLAQVRAYIMEKKNGVVIVFAKIYY*SSKSQYILEIEISDFQMITILQX

>LQW230635.y1
>lcl|LQW230635.y1 CHROMAT_FILE: LQW230635.y1 PHD_FILE: LQW230635.y1.phd.1 CHEM:
term DYE: ET TIME: Mon Aug 27 11:19:55 2001 TEMPLATE: LQW230635 DIRECTION: rev 
GGCGGACACAGGTGTATATGCAACAGAACACTGGATGTTATAGCGACTGTCGCTTGCCGCCGTATGAGAATAAATAAGTT

ACATTCATCCACTCCACAGTTCAACAAATCGTTAATGAGTTCAACTGCCTTTCTTCTACGCTCGAGATAAGAACTTTTAG

CCAACGGTTCCAAGGGTGCCTATCTTGATGAAATGCTATGGTTGTATGCGGTAACCAATATATCCCTGCTTATATTTAAC

GAAAGCTTTGACCCTGATAATGAGAAGTGGTTTGGGGCAATGAGAGAGAATATCAGGTCACACACGGCAAGGTAACTTTG

TTCTCGCTATATAGCCCAAAGATACGGGTTCGAAGCTGTAATATACCTATTTTGATGATATTTTTTTTAACATAATGAAC

CCATGCAGGTTGTCCAAGTTGTCAGCCATCCATTTACAAAAAACAAACAATAAATAAATATCCCCCTTCTCGGTAACTCG

TAAGTTACATATACGCGGTAGCTCGTAAGCAAGCACGATATGTATAAAACAGAACACCGGTGTTATGACGACTGACGTTG

CCCGGTATGTGAGGATAAACAAGTTATACCTTTTTTTAATCAATGTTCCAGACGCGAGAGATTCTGTACCTTTCTCATGT

ACGTTCCATTTCTGAAGATCTGCCGTTGGTTCGAAACAGCTCCATGTACCATACAGGTCGAAAAACAATTGCAAGCTCAA

CATTGTTGAATCGTGAGATCAGTGACCGATACCCCTGATTTTGATGTCCTAATAGGCAGAAAGGTAAAAGTGGGCGGGTT

AATATCAATAAAGGGCGACAAACCTGTGAAATCCAGGGAAGGCACCAAAAGGGACACAGAGAGGTGACACAGTGAAAGCG

GCTAAAGCCATAAAGACCAA

>_1
                              GGHRCICNRTLDVIATVACRRMRINKLHSSTPQFNKSLMSSTAFLLRSR*ELLANGSKGA
                              YLDEMLWLYAVTNISLLIFNESFDPDNEKWFGAMRENIRSHTAR*LCSRYIAQRYGFEAV
                              IYLF**YFF*HNEPMQVVQVVSHPFTKNKQ*INIPLLGNS*VTYTR*LVSKHDMYKTEHR
                              CYDD*RCPVCEDKQVIPFFNQCSRRERFCTFLMYVPFLKICRWFETAPCTIQVEKQLQAQ
                              HC*IVRSVTDTPDFDVLIGRKVKVGGLISIKGDKPVKSREGTKRDTER*HSESG*SHKDQ
                              >_2
                              ADTGVYATEHWML*RLSLAAV*E*ISYIHPLHSSTNR**VQLPFFYARDKNF*PTVPRVP
                              ILMKCYGCMR*PIYPCLYLTKALTLIMRSGLGQ*ERISGHTRQGNFVLAI*PKDTGSKL*
                              YTYFDDIFFNIMNPCRLSKLSAIHLQKTNNK*ISPFSVTRKLHIRGSS*ASTICIKQNTG
                              VMTTDVARYVRINKLYLFLINVPDARDSVPFSCTFHF*RSAVGSKQLHVPYRSKNNCKLN
                              IVES*DQ*PIPLILMS**AER*KWAG*YQ*RATNL*NPGKAPKGTQRGDTVKAAKAIKT
                              >_3
                              RTQVYMQQNTGCYSDCRLPPYENK*VTFIHSTVQQIVNEFNCLSSTLEIRTFSQRFQGCL
                              S**NAMVVCGNQYIPAYI*RKL*P***EVVWGNEREYQVTHGKVTLFSLYSPKIRVRSCN
                              IPILMIFFLT**THAGCPSCQPSIYKKQTINKYPPSR*LVSYIYAVARKQARYV*NRTPV
                              L*RLTLPGM*G*TSYTFF*SMFQTREILYLSHVRSISEDLPLVRNSSMYHTGRKTIASST
                              LLNREISDRYP*F*CPNRQKGKSGRVNINKGRQTCEIQGRHQKGHREVTQ*KRLKP*RP
                              >_4
                              LVFMALAAFTVSPLCVPFGAFPGFHRFVALY*Y*PAHFYLSAY*DIKIRGIGH*SHDSTM
                              LSLQLFFDLYGTWSCFEPTADLQKWNVHEKGTESLASGTLIKKRYNLFILTYRATSVVIT
                              PVFCFIHIVLAYELPRICNLRVTEKGDIYLLFVFCKWMADNLDNLHGFIMLKKISSK*VY
                              YSFEPVSLGYIARTKLPCRV*PDILSHCPKPLLIIRVKAFVKYKQGYIGYRIQP*HFIKI
                              GTLGTVG*KFLSRA*KKGS*TH*RFVELWSG*M*LIYSHTAASDSRYNIQCSVAYTPVSA
                              >_5
                              GLYGFSRFHCVTSLCPFWCLPWISQVCRPLLILTRPLLPFCLLGHQNQGYRSLISRFNNV
                              ELAIVFRPVWYMELFRTNGRSSEMERT*ERYRISRVWNID*KKV*LVYPHIPGNVSRHNT
                              GVLFYTYRACLRATAYM*LTSYREGGYLFIVCFL*MDG*QLGQPAWVHYVKKNIIKIGIL
                              QLRTRIFGLYSENKVTLPCVT*YSLSLPQTTSHYQGQSFR*I*AGIYWLPHTTIAFHQDR
                              HPWNRWLKVLISSVEERQLNSLTIC*TVEWMNVTYLFSYGGKRQSL*HPVFCCIYTCVRX
                              >_6
                              WSLWL*PLSLCHLSVSLLVPSLDFTGLSPFIDINPPTFTFLPIRTSKSGVSVTDLTIQQC
                              *ACNCFSTCMVHGAVSNQRQIFRNGTYMRKVQNLSRLEH*LKKGITCLSSHTGQRQSS*H
                              RCSVLYISCLLTSYRVYVTYELPRRGIFIYCLFFVNGWLTTWTTCMGSLC*KKYHQNRYI
                              TASNPYLWAI*REQSYLAVCDLIFSLIAPNHFSLSGSKLSLNISRDILVTAYNHSISSR*
                              APLEPLAKSSYLERRRKAVELINDLLNCGVDECNLFILIRRQATVAITSSVLLHIHLCPP

LQW158767.y1 
LQW158767.y1.phd.1 LQW158767.x1 

           13:05:56 2001 TEMPLATE: LQW158767 DIRECTION: rev
          Length = 866

 Score =  329 bits (766), Expect = 1e-89
 Identities = 99/99 (100%), Positives = 99/99 (100%)
 Frame = -3

Query: 1   GFPVFGCFPLLGKNKERVFMNWSRTSYGPIYYARLGASRVLVLNGYEAVREALVLRPQAF 60
           GFPVFGCFPLLGKNKERVFMNWSRTSYGPIYYARLGASRVLVLNGYEAVREALVLRPQAF
Sbjct: 489 GFPVFGCFPLLGKNKERVFMNWSRTSYGPIYYARLGASRVLVLNGYEAVREALVLRPQAF 310

Query: 61  AGRCKTELMKLLYEGQHGIMQLDHGPMWKAQRKFGQNAL 99
           AGRCKTELMKLLYEGQHGIMQLDHGPMWKAQRKFGQNAL
Sbjct: 309 AGRCKTELMKLLYEGQHGIMQLDHGPMWKAQRKFGQNAL 193

>LQW158767.y1
>lcl|LQW158767.y1 CHROMAT_FILE: LQW158767.y1 PHD_FILE: LQW158767.y1.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 13:05:56 2001 TEMPLATE: LQW158767 DIRECTION: rev 
TAAGTCGGTACCTACACTTCGTGTCGCTTGCAGTTTTGTTGCACGTACAATTCGTACCTGTTTACGAGTTAGCGTATATA

TAACTTAATAAGTAATAAATGTAAGAATTTGTGCATTGGAAAACTGGGTAATATATACATGACCACAATGCGTAAATACC

TGAAGACTTCGCTTTCCCATGCCTAAGCTTCCAAGAGCATTTTGTCCGAACTTACGCTGTGCTTTCCACATAGGTCCATG

ATCAAGCTGCATTATACCATGCTGGCCTTCGTACAGTAACTTCATCAACTCAGTTTTACAACGACCCGCAAAAGCCTGTG

GTCTCAAGACAAGAGCTTCTCTAACAGCTTCGTAGCCGTTTAAAACCAAGACCCTTGAGGCGCCAAGACGCGCGTAGTAG

ATGGGCCCATAACTGGTGCGAGACCAATTCATAAAGACTCGTTCTTTGTTCTTCCCTAGTAAGGGAAAACACCCAAATAC

AGGGAATCCATTACGACCCCGTAGCGTGCCACTGGTACCCAAGAATCGCCACCATGTATCATACACTACGAATAGAACGC

AAGTCAAAATAGCTGCGCTTGTCAGCAAAGTTTCCATAGAGATTTGTGAAGCGAAAGCAAATATTCGAAGCATGTTTGGA

GTTATTTTCCTGCAAATCTAAAAATATGTGAATAAATAAAAACGTATTAGTTAGACATGATCTAAATCCAGGTTCTCAGC

AAGGGACTCACTCATACAGAAATGAATATAACTCCTTACTTAATCGGTTATTACGATTACAATTTTGAATTACTTTGCCC

TTTGGGCACTTTAACCATTGGTATCTATATTGTATCCTCATATTTACTAAAAAGTTTTTTTTTACC

>_4
                              *KKTF**I*GYNIDTNG*SAQRAK*FKIVIVITD*VRSYIHFCMSESLAENLDLDHV*LI
                              RFYLFTYF*ICRKITPNMLRIFAFASQISMETLLTSAAILTCVLFVVYDTWWRFLGTSGT
                              LRGRNGFPVFGCFPLLGKNKERVFMNWSRTSYGPIYYARLGASRVLVLNGYEAVREALVL
                              RPQAFAGRCKTELMKLLYEGQHGIMQLDHGPMWKAQRKFGQNAL GSLGMGKRSLQVFTHC
                              GHVYITQFSNAQILTFITY*VIYTLTRKQVRIVRATKLQATRSVGTDL
                              >_5
                              VKKNFLVNMRIQYRYQWLKCPKGKVIQNCNRNNRLSKELYSFLYE*VPC*EPGFRSCLTN
                              TFLFIHIFLDLQENNSKHASNICFRFTNLYGNFADKRSYFDLRSIRSV*YMVAILGYQWH
                              ATGS*WIPCIWVFSLTREEQRTSLYELVSHQLWAHLLRASWRLKGLGFKRLRSC*RSSCL
                              ETTGFCGSL*N*VDEVTVRRPAWYNAA*SWTYVESTA*VRTKCSWKLRHGKAKSSGIYAL
                              WSCIYYPVFQCTNSYIYYLLSYIYANS*TGTNCTCNKTASDTKCRYRLX
                              >_6
                              GKKKLFSKYEDTI*IPMVKVPKGQSNSKL*S**PIK*GVIFISV*VSPLLRTWI*IMSN*
                              YVFIYSHIFRFAGK*LQTCFEYLLSLHKSLWKLC*QAQLF*LAFYS*CMIHGGDSWVPVA
                              RYGVVMDSLYLGVFPY*GRTKNESL*IGLAPVMGPSTTRVLAPQGSWF*TATKLLEKLLS
                              *DHRLLRVVVKLS**SYCTKASMV*CSLIMDLCGKHSVSSDKMLLEA*AWESEVFRYLRI
                              VVMYILPSFPMHKFLHLLLIKLYIR*LVNRYELYVQQNCKRHEV*VPTX

>LQW158767.x1
>lcl|LQW158767.x1 CHROMAT_FILE: LQW158767.x1 PHD_FILE: LQW158767.x1.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 13:04:55 2001 TEMPLATE: LQW158767 DIRECTION: fwd 
TAGAAACGGCAGGCAGCTTTTCCAGATAGACTTTGTTAATTGATTTACCCGAACATTTTCGTGTTATGTTACGAGAGTAT

ATAGGCAACAATAAAGGGCGCGTCTTTGAACTTATTGCACAGTTTTCACCTGCAACACATTTGATAAACAACTAAAACGA

CTCAATAACAAGAATTTAGTTTAGCCCAATCTAAAACTTATTGAACTTGCGTTTTAACAGATAAACATGATAAAAATTTA

ACAACTGGATGTCTGATTTAACATCACTATGGTTTTAGTCAAGGTCAAGGTCACTTTTTTTAAATCTCCTTTTACCTGTA

CCCATTCGATAATGGGCGAAACTAATGTGAAAGTTTGATTCGAAAGTATTCTCTTGGCCCAACAATGTGCGCGGCAAAGA

CGATTATTGTTGTTAATTAATAAAACAGTGTTAAACTGCTACAACATGTTTTTACTGGCTGAAAAAAAGCATAATTAAAA

GATGCTCATTTTAAATGCACGCTGAAAAAAATATTAAAACCCCTAAAATTTTGTTGCTTGCAAGTTTAAATCATCAATCC

CGTATCATATAGTTCAATATAATAGACTAAAATATTTTGTTCTGTCTGATTTTGTTCCATAAATGTAGTTTATGAAAAAT

GAGATATAAACATAAGGAAATATTCAGGTGTCAATATGGCTTTAATTTGGGATTAAAAAAACAATAACTAATGTTTAAAT

TTACCGGGCAAGAACTATAGCACAGATGTTGCATTTCGTTGGGTAACCACAGTTGCGAATACTGGTATAAAAATTTTCAT

TTCTCTAAAAAATTCCAAAAACTTGTCTA

LQW253687.x1 
LQW253687.x1.phd.1 LQW253687.y1 

           12:14:26 2001 TEMPLATE: LQW253687 DIRECTION: fwd
          Length = 917

 Score =  329 bits (766), Expect = 1e-89
 Identities = 99/99 (100%), Positives = 99/99 (100%)
 Frame = +1

Query: 1   GFPVFGCFPLLGKNKERVFMNWSRTSYGPIYYARLGASRVLVLNGYEAVREALVLRPQAF 60
           GFPVFGCFPLLGKNKERVFMNWSRTSYGPIYYARLGASRVLVLNGYEAVREALVLRPQAF
Sbjct: 124 GFPVFGCFPLLGKNKERVFMNWSRTSYGPIYYARLGASRVLVLNGYEAVREALVLRPQAF 303

Query: 61  AGRCKTELMKLLYEGQHGIMQLDHGPMWKAQRKFGQNAL 99
           AGRCKTELMKLLYEGQHGIMQLDHGPMWKAQRKFGQNAL
Sbjct: 304 AGRCKTELMKLLYEGQHGIMQLDHGPMWKAQRKFGQNAL 420

>LQW253687.x1
>lcl|LQW253687.x1 CHROMAT_FILE: LQW253687.x1 PHD_FILE: LQW253687.x1.phd.1 CHEM:
term DYE: ET TIME: Fri Aug 31 12:14:26 2001 TEMPLATE: LQW253687 DIRECTION: fwd 
GGAGGCAAGAGGAGAAGGCACGCAGCTGCTGACAGCGCAGCTATTTTGACTTGCGTTCTATTCGTAGTGTATGATACATG

GTGGCGATTCTTGGGTACCAGTGGCACGCTACGGGGTCGTAATGGATTCCCTGTATTTGGGTGTTTTCCCTTACTAGGGA

AGAACAAAGAACGAGTCTTTATGAATTGGTCTCGCACCAGTTATGGGCCCATCTACTACGCGCGTCTTGGCGCCTCAAGG

GTCTTGGTTTTAAACGGCTACGAAGCTGTTAGAGAAGCTCTTGTCTTGAGACCACAGGCTTTTGCGGGTCGTTGTAAAAC

TGAGTTGATGAAGTTACTGTACGAAGGCCAGCATGGTATAATGCAGCTTGATCATGGACCTATGTGGAAAGCACAGCGTA

AGTTCGGACAAAATGCTCTTGGAAGCTTAGGCATGGGAAAGCGAAGTCTTCAGGTATTTACGCATTGTGGTCATGTATAT

ATTACCCAGTTTTCCAATGCACAAATTCTTACATTTATTACTTATTAAGTTATATATACGCTAACTCGTAAACAGGTACG

AATTGTACGTGCAACAAAACTGCAAGCGGACACAAGGTGTATAATGCAACAGAACACTGGTGTTATAGCGACTGTCGTTG

CCGCCGTATGAGACTAATCAGTTACATTCATCCACTCCACAGTCAAAATCGTTAATGAGTTAACTGACTTTTTTTAGGCT

CGAGAGACTTTTACCACGGTCCAAGGTGCTATTTGATGAATGTAGGTGTATGCGGCAAGGAAAACCGGTAAATTAAGAAG

TTGAGCGATAAAGAATGGTGGGACGAAAAAATCGGCCACCCGCAGAAGGGGCCGATAGCCAGACGGTCAAGAGAACAAGG

AAATTGGAGAAACCGCGGTAAGGGCCCTAGAGAAAAG

>_1
                              GGKRRRHAAADSAAILTCVLFVVYDTWWRFLGTSGTLRGRNGFPVFGCFPLLGKNKERVF
                              MNWSRTSYGPIYYARLGASRVLVLNGYEAVREALVLRPQAFAGRCKTELMKLLYEGQHGI
                              MQLDHGPMWKAQRKFGQNALGSLGMGKRSLQVFTHCGHVYITQFSNAQILTFITY*VIYT
                              LTRKQVRIVRATKLQADTRCIMQQNTGVIATVVAAV*D*SVTFIHSTVKIVNELTDFF*A
                              RETFTTVQGAI**M*VYAARKTGKLRS*AIKNGGTKKSATRRRGR*PDGQENKEIGETAV
                              RALEKX
                              >_2
                              EARGEGTQLLTAQLF*LAFYS*CMIHGGDSWVPVARYGVVMDSLYLGVFPY*GRTKNESL
                              *IGLAPVMGPSTTRVLAPQGSWF*TATKLLEKLLS*DHRLLRVVVKLS**SYCTKASMV*
                              CSLIMDLCGKHSVSSDKMLLEA*AWESEVFRYLRIVVMYILPSFPMHKFLHLLLIKLYIR
                              *LVNRYELYVQQNCKRTQGV*CNRTLVL*RLSLPPYETNQLHSSTPQSKSLMS*LTFFRL
                              ERLLPRSKVLFDECRCMRQGKPVN*EVER*RMVGRKNRPPAEGADSQTVKRTRKLEKPR*
                              GP*RKX
                              >_3
                              RQEEKARSC*QRSYFDLRSIRSV*YMVAILGYQWHATGS*WIPCIWVFSLTREEQRTSLY
                              ELVSHQLWAHLLRASWRLKGLGFKRLRSC*RSSCLETTGFCGSL*N*VDEVTVRRPAWYN
                              AA*SWTYVESTA*VRTKCSWKLRHGKAKSSGIYALWSCIYYPVFQCTNSYIYYLLSYIYA
                              NS*TGTNCTCNKTASGHKVYNATEHWCYSDCRCRRMRLISYIHPLHSQNR**VN*LFLGS
                              RDFYHGPRCYLMNVGVCGKENR*IKKLSDKEWWDEKIGHPQKGPIARRSREQGNWRNRGK
                              GPREK

>LQW253687.y1
>lcl|LQW253687.y1 CHROMAT_FILE: LQW253687.y1 PHD_FILE: LQW253687.y1.phd.1 CHEM:
term DYE: ET TIME: Fri Aug 31 12:14:38 2001 TEMPLATE: LQW253687 DIRECTION: rev 
CTAGCCCTGGACCGGGTATATATTGCAAGGTAGAGCAGGACGGTAACGGAATATCTCCTGCATAACAGCTCGTGTGTATG

GCATCTTATACTCGTCTTCCTGAGATGAGAGGAACAGTTTTAAGCAGGCTATAGCTTGGTTCGTATATAAGGTGTTAAAG

ATCAAAATTATTAACTTTGGCATTCTATAACTGCAGTGTTATGTGCAAAGTTTGACTTTAACCCAGAGGTTCCTTATGAG

TTATCTAAACTGTCAGTCCTACAAATCCAATACAGTTATCCACAAATTTACAAACATTCATTCATTTGTTCCTTCACCTA

TTCTTCATCTATCCACTTACCAGGGTAGGTTCCCTCCCAAGAGAATCAATCTCATCCCTCAACCTTTTCATGACTTCAGG

ATTTTTCAGCAGAAGCAAAAGCGCCCAACTATTTGTGTTGGATGAAGTCTCAGTGCCAGCAATAAACAAGTCGTTCATGA

AATATAGGAGTTGTTTTTCTGTGAAACTGATGAAACGGAATCAAGTTTATGATTGCACTCTTAAAGATTGGGCAGGTGTG

AATATTTTTAGACTGAGTTGGGGCAGTAGGTCAAACCGGGCCTAAGTACTACAGGTATCATAGCTTAGGGGCGAATAGCA

GCTCACTTATTAAGAATATTAGCAGACGCAAGCATTTTAAGTCTACTACAGCATAGGTTCTCAATCGTGCTACGCCAAAA

AACGTCGGCCTTATAGAATAAGTTACAGTAAGATTATGAATGTAAGTACAAGTTATTACCAATTTAGCAAGATGTCTTTA

CACAGGGGGTTTGTATGTGATGTTGCCTTATGTAATATACATTAATTAAAAACAAGCAACAACTGTTTTAACGAATTATG

TCATGAATTAGGACAACAAAAAGACAGGGGAACAGGCAGGAATTCAAATTCACAATGTTGAATGAATTGTTCACTTTTGA

AATGGTTTGAA

>_4
                              QTISKVNNSFNIVNLNSCLFPCLFVVLIHDIIR*NSCCLFLINVYYIRQHHIQTPCVKTS
                              C*IGNNLYLHS*SYCNLFYKADVFWRSTIENLCCSRLKMLASANILNK*AAIRP*AMIPV
                              VLRPGLTYCPNSV*KYSHLPNL*ECNHKLDSVSSVSQKNNSYIS*TTCLLLALRLHPTQI
                              VGRFCFC*KILKS*KG*GMRLILLGGNLPW*VDR*RIGEGTNE*MFVNLWITVLDL*D*Q
                              FR*LIRNLWVKVKLCT*HCSYRMPKLIILIFNTLYTNQAIACLKLFLSSQEDEYKMPYTR
                              AVMQEIFRYRPALPCNIYPVQG*
                              >_5
                              SNHFKSEQFIQHCEFEFLPVPLSFCCPNS*HNSLKQLLLVFN*CILHKATSHTNPLCKDI
                              LLNW**LVLTFIILL*LIL*GRRFLA*HD*EPML**T*NACVC*YS**VSCYSPLSYDTC
                              ST*ARFDLLPQLSLKIFTPAQSLRVQS*T*FRFISFTEKQLLYFMNDLFIAGTETSSNTN
                              SWALLLLLKNPEVMKRLRDEIDSLGREPTLVSG*MKNR*RNK*MNVCKFVDNCIGFVGLT
                              V*ITHKEPLG*SQTLHITLQL*NAKVNNFDL*HLIYEPSYSLLKTVPLISGRRV*DAIHT
                              SCYAGDIPLPSCSTLQYIPGPGLX
                              >_6
                              FKPFQK*TIHSTL*I*IPACSPVFLLS*FMT*FVKTVVACF*LMYIT*GNITYKPPV*RH
                              LAKLVITCTYIHNLTVTYSIRPTFFGVARLRTYAVVDLKCLRLLIFLISELLFAPKL*YL
                              *YLGPV*PTAPTQSKNIHTCPIFKSAIINLIPFHQFHRKTTPIFHERLVYCWH*DFIQHK
                              *LGAFASAEKS*SHEKVEG*D*FSWEGTYPGKWIDEE*VKEQMNECL*ICG*LYWICRTD
                              SLDNS*GTSGLKSNFAHNTAVIECQS**F*SLTPYIRTKL*PA*NCSSHLRKTSIRCHTH
                              ELLCRRYSVTVLLYLAIYTRSRAX

DEV30421.y1 

           CHEM: term DYE: ET TIME: Wed Mar 21 15:37:12 2001
           TEMPLATE: DEV30421 DIRECTION: rev
          Length = 408

 Score =  199 bits (461), Expect = 1e-50
 Identities = 71/117 (60%), Positives = 73/117 (61%), Gaps = 20/117 (17%)
 Frame = +2

Query: 3   PVFGCFPLLGKNKERVFMNWSRTSY-------------GPIYYARLGAS--RVLV----- 42
           PVFGCFP                 Y              P+    +G S  RVL      
Sbjct: 29  PVFGCFP-----------------Y*GRTKNESL*IGLAPV----MGPSTTRVLAPQGSG 145

Query: 43  LNGYEAVREALVLRPQAFAGRCKTELMKLLYEGQHGIMQLDHGPMWKAQRKFGQNAL 99
           LNGYEAVREALVLRPQAFAGRCKTELMKLLYEGQHGIMQLDHGPMWKAQRKFGQNAL
Sbjct: 146 LNGYEAVREALVLRPQAFAGRCKTELMKLLYEGQHGIMQLDHGPMWKAQRKFGQNAL 316

LQW148467.y1 
LQW148467.y1.phd.1 LQW148467.x1 

           12:21:30 2001 TEMPLATE: LQW148467 DIRECTION: rev
          Length = 995

 Score =  123 bits (282), Expect = 1e-27
 Identities = 43/53 (81%), Positives = 44/53 (82%), Gaps = 2/53 (3%)
 Frame = +3

Query: 1   GFPVFGCFPLLGKNKERVFMNWSRTSYGPIYYARLGASRVLV--LNGYEAVRE 51
           GFPVFGCFPLLGKNKERVFMNWSRTSYGPIY ARL ASRV V  L   + VRE
Sbjct: 627 GFPVFGCFPLLGKNKERVFMNWSRTSYGPIY*ARLXASRVWV*RL---QSVRE 776

LQW148467.x1 
LQW148467.x1.phd.1 LQW148467.y1 

           12:20:32 2001 TEMPLATE: LQW148467 DIRECTION: fwd
          Length = 1020

 Score =  489 bits (1143), Expect(3) = e-143
 Identities = 164/167 (98%), Positives = 164/167 (98%)
 Frame = -2

Query: 77  LIL*GRRFLA*HD*EPML**T*NACVC*YS**VSCYSPLSYDTCST*ARFDLLPQLSLKI 136
           LIL*GRRFLA*HD*EPM **T*NACV *YS**VSCYSPLSYDTC T*ARFDLLPQLSLKI
Sbjct: 503 LIL*GRRFLA*HD*EPMV**T*NACVY*YS**VSCYSPLSYDTCGT*ARFDLLPQLSLKI 324

Query: 137 FTPAQSLRVQS*T*FRFISFTEKQLLYFMNDLFIAGTETSSNTNSWALLLLLKNPEVMKR 196
           FTPAQSLRVQS*T*FRFISFTEKQLLYFMNDLFIAGTETSSNTNSWALLLLLKNPEVMKR
Sbjct: 323 FTPAQSLRVQS*T*FRFISFTEKQLLYFMNDLFIAGTETSSNTNSWALLLLLKNPEVMKR 144

Query: 197 LRDEIDSLGREPTLVSG*MKNR*RNK*MNVCKFVDNCIGFVGLTV*I 243
           LRDEIDSLGREPTLVSG*MKNR*RNK*MNVCKFVDNCIGFVGLTV*I
Sbjct: 143 LRDEIDSLGREPTLVSG*MKNR*RNK*MNVCKFVDNCIGFVGLTV*I 3

 Score = 39.7 bits (86), Expect(3) = e-143
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = -3

Query: 58  KDILLNW**LVLTFIILL* 76
           KDILLN  *LVLTF ILL*
Sbjct: 562 KDILLNRV*LVLTFLILL* 506

 Score = 23.9 bits (49), Expect(3) = e-143
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 4/22 (18%)
 Frame = -1

Query: 38  LLVFN*C--ILH--KATSHTNP 55
           LLVF     IL   K TSHT P
Sbjct: 627 LLVF---LFILYYSKGTSHTKP 571

>LQW148467.x1
>lcl|LQW148467.x1 CHROMAT_FILE: LQW148467.x1 PHD_FILE: LQW148467.x1.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 12:20:32 2001 TEMPLATE: LQW148467 DIRECTION: fwd 
GGTATCTAAACTGTCAGCCCTACAAATCCAATACAGTTATCCACAAATTTACAAACATTCATTCATTTGTTCCTTCACCT

ATTTTTCATCTATCCACTTACCAGGGTAGGTTCCCTCCCAAGAGAATCAATCTCATCCCTCAACCTTTTCATGACTTCAG

GATTTTTCAGCAGAAGCAAAAGCGCCCAACTATTTGTGTTGGATGAAGTCTCAGTGCCAGCAATAAACAAGTCGTTCATG

AAATATAGGAGTTGTTTTTCTGTGAAACTGATGAAACGGAATCAAGTTTATGATTGCACTCTTAAAGATTGGGCAGGTGT

GAATATTTTTAGACTGAGTTGGGGCAGTAGGTCAAACCGGGCCTAAGTACCACAGGTATCATAGCTTAGGGGCGAATAGC

AGCTCACTTATTAAGAATATCAGTAGACGCAAGCATTTTAAGTCTACTACACCATAGGTTCTCAATCGTGCTACGCCAAA

AAACGTCGCCCTTATAGTATAAGTCTTACAGTAAGATTAGGAATGTAAGTACAAGTTATACCCGATTTAGCAAGATGTCT

TTACCACAACGGGTTTTGTATGTGATGTGCCCTTACTGTAATATAGAATAAATAAAAACACAAGCAACCAACCTGTCGTT

AGCCGATTTACTGTCCATTGTTTTTTGGTTACAGTCTATAAAGTCCGGGGGGTCGTCCGGGTCACGTGATTGTCGATGAT

TTTCACCAAATTGTTTGAACTTTGCCAGTGTGGGTTTTCGTCGTGGGTGGGTACCTTGAGCTGTTGTCGAACCCCGCGGG

ATCTCTGAAAGGGACGTCATGAGAAGGCAACGAACGTCGCGTTGGATATGCTGCAACAGCGTGCTGGTGTCCTCATACGG

GAGGCGGGCCAAGCCGGGCGTGTAACATGGTGGTCACACGTCAGATTCAACCGCGGGGAGGATTTGGTGAGAGGCAGGAC

GCGCGCTTAGACACAATTGCGTGGCGCTTCCTCCTCCTTCCTGGTTCCGACTTCGTGGTT

HRQSRDPDDPPDFIDCNQKTMDSKSANDR

>_4
                              NHEVGTRKEEEAPRNCV*ARVLPLTKSSPRLNLTCDHHVTRPAWPASRMRTPARCCSISN
                              ATFVAFS*RPFQRSRGVRQQLKVPTHDENPHWQSSNNLVKIIDNHVTRTTPRTL*TVTKK
                              QWTVNRLTTGWLLVFLFILYYSKGTSHTKPVVVKTSC*IGYNLYLHS*SYCKTYTIRATF
                              FGVARLRTYGVVDLKCLRLLIFLISELLFAPKL*YLWYLGPV*PTAPTQSKNIHTCPIFK
                              SAIINLIPFHQFHRKTTPIFHERLVYCWH*DFIQHK*LGAFASAEKS*SHEKVEG*D*FS
                              WEGTYPGKWIDEK*VKEQMNECL*ICG*LYWICRADSLDT
                              >_5
                              PRSRNQEGGGSATQLCLSARPASHQILPAVESDV*PPCYTPGLARLPYEDTSTLLQHIQR
                              DVRCLLMTSLSEIPRGSTTAQGTHPRRKPTLAKFKQFGENHRQSRDPDDPPDFIDCNQKT
                              MDSKSANDRLVACVFIYSILQ*GHITYKTRCGKDILLNRV*LVLTFLILL*DLYYKGDVF
                              WRSTIENLWCSRLKMLASTDILNK*AAIRP*AMIPVVLRPGLTYCPNSV*KYSHLPNL*E
                              CNHKLDSVSSVSQKNNSYIS*TTCLLLALRLHPTQIVGRFCFC*KILKS*KG*GMRLILL
                              GGNLPW*VDR*KIGEGTNE*MFVNLWITVLDL*G*QFRYX
                              >_6
                              TTKSEPGRRRKRHAIVSKRASCLSPNPPRG*I*RVTTMLHARLGPPPV*GHQHAVAAYPT
                              RRSLPSHDVPFRDPAGFDNSSRYPPTTKTHTGKVQTIW*KSSTIT*PGRPPGLYRL*PKN
                              NGQ*IG*RQVGCLCFYLFYITVRAHHIQNPLW*RHLAKSGITCTYIPNLTVRLIL*GRRF
                              LA*HD*EPMV**T*NACVY*YS**VSCYSPLSYDTCGT*ARFDLLPQLSLKIFTPAQSLR
                              VQS*T*FRFISFTEKQLLYFMNDLFIAGTETSSNTNSWALLLLLKNPEVMKRLRDEIDSL
                              GREPTLVSG*MKNR*RNK*MNVCKFVDNCIGFVGLTV*IP

>_1 from a related gene
                              XHGFEAVIDLF**YFF*HNEPMQVVQVVSHPFTKNKQ*INIPLLGNS*VTYTR*LVSKHD
                              MYKTEHRCYDD*RCPVCEDKQVIPFFNQCFRRERFLYLLMYVPFLKNLPLVRQQLNVTIQ
                              GRKTKLAKFKQFVENHRQSRDPDDPRDFIDCYLNTMDSKSANDRLVACVFIYSILQ*GHI
                              TYKTRCGKDILLNRV*LVLTFLILL*DLYYKGDVFWRSTIETLWCSRLKCLRLLISL**A

>_2
                              YTGSKL**TYFDDIFFNIMNPCRLSKLSAIHLQKTNNK*ISPFSVTRKLHIRGSS*ASTI
                              CIKQNTGVMTTDVARYVRINKLYLFLINVSDARDSCTFSCTFRF*RICRWFDNSSMLPYK
                              DEKPNLQSSNNLLKIIDNHVTRTTPVTL*TVT*IQWTVNRLTTGWLLVFLFILYYSKGTS
>_3
                              TRVRSCNRPILMIFFLT**THAGCPSCQPSIYKKQTINKYPPSR*LVSYIYAVARKQARY
                              V*NRTPVL*RLTLPGM*G*TSYTFF*SMFQTREIPVPSHVRSVSEESAVGSTTAQCYHTR
                              TKNQTCKVQTIC*KSSTIT*PGRPP*LYRLLPKYNGQ*IG*RQVGCLCFYLFYITVRAHH

>sequence 231
new seq like seq 33 is this 43? no it is a new seq
FYRKEIKEPKNNFNVNEPKDYVDAFLIEMKKHSLEDSWFH (0?)
EEALLICVADLFVAGIETSTGTVMWGMTVLINYPEIQEKLHKEIVNAT (1?)
GETPPNLDQMDELPLIQAFIQELYRYMTLAPLSLQHETTKDADIGGYCIPKETL (0?)
VLTNIYAVHHDSNIWKNPSEFNIYRHIDKEGKFILSKKVIPF (?)
GIGCRSCLGDKLARNEVFLLLANIIKGFEILPDPESKELPDYKDGVNGFLYVPYDYKLVAKPRIVNE*

>GCiWno162_l04.b1 CHROMAT_FILE: GCiWno162_l04.b1 PHD_FILE: GCiWno162_l04.b1.phd.1
           CHEM: term DYE: big TIME: Fri Sep 28 15:14:21 2001
           TEMPLATE: GCiWno162_l04 DIRECTION: fwd
          Length = 917

 Score = 70.6 bits (170), Expect = 3e-12
 Identities = 34/48 (70%), Positives = 40/48 (82%), Gaps = 1/48 (2%)
 Frame = -1

Query: 1   DESLMVCVADLFLAGQTTSTSTIMWGWW-LILYPEIQEKLHKEIANAT 47
           +E+L++CVADLF+AG  TST T+MWG   LI YPEIQEKLHKEI NAT
Sbjct: 593 EEALLICVADLFVAGIETSTGTVMWGMTVLINYPEIQEKLHKEIVNAT 450

>GCiWno162_l04.b1_4
DXWVSLFSSKVFCDLKCFVL*KRFYRKEIKEPKNNFNVNEPKDYVDAFLIEMKKHSLEDS
WFHVSCTIFTIIFYGDLYCFKVTFVLHRLLRTEYDKMSPKTV*NFISGRSSFDLCG*LVC
CWNRNEYRHSNVGDDCAY*LSGDTRETS*RNSQCNRCVK*SLVSFL*QTYSGETPPNLDQ
MDELPLIQAFIQELYRYMTLAPLSLQHETTKDADIGGYCIPKETL VCLLYS*DILC*TYL
ISLNFISGVNKHLCRPSRFEYLEESERVQHLSSHRQRREVHSFQESDSV*NEDRQ*FSCR
QGMNR
>GCiWno162_l04.b1_5
*PXG*SFQ*QSVL*FKMFCFIKKILPERDKRTQE*L*CE*TKGLCRCFPY*DEKALS*RF
MVSCKLYYFHNHFLWRPVLF*GHIRTTPVVKN*I*QDVA*NCLKLYFRKKLF*FVWLTCL
LLE*KRVQAQ*CGG*LCLLTIRRYKRNFIKK*SMQQVC*VKSCFISLTNLLR*NTAKLGP
NG*TSTDPSFYSRTLPLHDSCATVSSTRNYKRCGYWRILYPQRDIGMSAIFLRYTVLNIS
YFIKFHIRC*QTFMPSITIRISGRIRASSTFIVTSTKKGSSFFPRK*FRLE*GSSVVFLQ
ARYEPX
>GCiWno162_l04.b1_6
LTXGLVFSVAKCFVI*NVLFYKKDFTGKR*KNPRITLM*MNQRIMSMLSLLR*KSTLLKI
HGFM*VVLFSQSFFMETCTVLRSHSYYTGC*ELNMTRCRLKLFETLFQ EEALLICVADLF
VAGIETSTGTVMWGMTVLINYPEIQEKLHKEIVNATG VLSEVLFHFFNKLTQVKHRQTWT
KWMNFH*SKLLFKNFTAT*LLRHCLFNTKLQKMRILADTVSPKRHWYVCYILKIYCVKHI
LFH*ISYQVLTNIYAVHHDSNIWKNPSEFNIYRHIDKEGKFILSKKVIPFRMRIVSSFPA
GKV*TX


>cibd084l24 
          Length = 722

 Score =  167 bits (418), Expect = 6e-41
 Identities = 79/105 (75%), Positives = 86/105 (81%)
 Frame = +1

Query: 1   VLTNIYAVHHDSNIWKNPSEFNIYRHIDKEGKFILSKKVIPFGIGCRSCLGEKLARIEIF 60
           VLTNIYAVHHDSNIWKNPSEFNIYRHIDKEGKFILSKKVIPFGIGCRSCLG+KLAR E+F
Sbjct: 40  VLTNIYAVHHDSNIWKNPSEFNIYRHIDKEGKFILSKKVIPFGIGCRSCLGDKLARNEVF 219

Query: 61  LFLANIIKRFKVLPDPESQDLPPMDDGITXXXXXXXXXKAVVLPR 105
           L LANIIK F++LPDPES++LP   DG+          K V  PR
Sbjct: 220 LLLANIIKGFEILPDPESKELPDYKDGVNGFLYVPYDYKLVAKPR 354



>sequence 43 1 accession 42% to 1A1 seq 43 shares an exact run with seq 24
in the heme peptide region, but ESTs support both sequences.
MFAKLFGWWGSSWVTTCLLGLLTLVILVYYYWWKLPHPRYPPGVRGIPVMGALPLLGKFA
HKVIMRWSHDKYGPVMSVRFGPSDSVVLNDYESVYEALVKQGPAFLTRPNIELINSYSNG
YGFGFAEGNKKYMEVRHFTLKALRGFGIGGRVMEERVSEVAQDLVQSLQELDGKPTNFR
MIVGTTVSNVIASIVLGKKFHPKDEDFQRHVQLIFD (?)
SFGDEETAXXILVLMYFPLLRHIPPFKNAXXXXXXXHFKQL 
DFCRKEILEHKKNLDENEPGDYIDAFLVEMKKHSPQDSWFH

EESLIVCVVDLFFAGTDTSTSTVMWAMVALLNFPEIQEKLHKEIANAT (1?) seq 57
DESLMVCVADLFLAGQTTSTSTIMWGWWLILYPEIXXXXXXXXXXXXX 

GEALPSLNHRDDLPLLQAFIQEV
YRCMTLVPLGVQHQTTKDVEISGYCIPKDTVVFTNIDAVHHDPNIWKNPSEFNIYRHIDK
DGKFIPSKKVIPFGIGCRSCLGEKLARIEIFLFLANIIKRFKVLPDPESQDLPPMDDGIT
GFGFFPFPFKAVVLPRKNEEIPE*

LQW201878.x1 from a similar gene to seq 7 but not same gene
LQW57065.x1 exon with GEALP up to PKDTV overlaps rcicl015b02
rcicl015b02 EST that covers from YRCM to end

>GCiWno35_e01.b1 CHROMAT_FILE: GCiWno35_e01.b1 PHD_FILE: GCiWno35_e01.b1.phd.1 CHEM:
           term DYE: big TIME: Sat Sep  1 10:03:45 2001 TEMPLATE:
           GCiWno35_e01 DIRECTION: fwd
          Length = 809

 Score = 70.6 bits (170), Expect = 3e-12
 Identities = 34/48 (70%), Positives = 40/48 (82%), Gaps = 1/48 (2%)
 Frame = +3

Query: 1   DESLMVCVADLFLAGQTTSTSTIMWGWW-LILYPEIQEKLHKEIANAT 47
           +E+L++CVADLF+AG  TST T+MWG   LI YPEIQEKLHKEI NAT
Sbjct: 171 EEALLICVADLFVAGIETSTGTVMWGMTVLINYPEIQEKLHKEIVNAT 314


>GCiWno108_j02.b1 CHROMAT_FILE: GCiWno108_j02.b1 PHD_FILE: GCiWno108_j02.b1.phd.1
           CHEM: term DYE: big TIME: Tue Sep 11 22:24:29 2001
           TEMPLATE: GCiWno108_j02 DIRECTION: fwd
          Length = 922

 Score = 70.6 bits (170), Expect = 3e-12
 Identities = 34/48 (70%), Positives = 40/48 (82%), Gaps = 1/48 (2%)
 Frame = +1

Query: 1   DESLMVCVADLFLAGQTTSTSTIMWGWW-LILYPEIQEKLHKEIANAT 47
           +E+L++CVADLF+AG  TST T+MWG   LI YPEIQEKLHKEI NAT
Sbjct: 301 EEALLICVADLFVAGIETSTGTVMWGMTVLINYPEIQEKLHKEIVNAT 444




LQW192891.x1 
LQW192891.x1.phd.1 LQW192891.y1 

           11:54:27 2001 TEMPLATE: LQW192891 DIRECTION: fwd
          Length = 974

 Score = 71.0 bits (171), Expect = 2e-12
 Identities = 34/35 (97%), Positives = 35/35 (99%)
 Frame = +1

Query: 26  FGIGGRVMEERVSEVAQDLVQSLQELDGKPTNFRM 60
           FGIGGRVMEERVSEVAQDLVQSLQELDGKPTNFR+
Sbjct: 214 FGIGGRVMEERVSEVAQDLVQSLQELDGKPTNFRV 318

 Score = 69.5 bits (167), Expect = 7e-12
 Identities = 33/35 (94%), Positives = 34/35 (96%)
 Frame = +2

Query: 59  RMIVGTTVSNVIASIVLGKKFHPKDEDFQRHXQLI 93
           +MIVGTTVSNVIASIVLGKKFHPKDEDFQRH QLI
Sbjct: 485 QMIVGTTVSNVIASIVLGKKFHPKDEDFQRHVQLI 589

>LQW192891.x1_1
NSSCMR**DWDLGLNWPITPTLYMHILFYMGEVVQ*GISWNSGFIPEVPLPRD*SQC*VI
IT*IFHICCCRFGIGGRVMEERVSEVAQDLVQSLQELDGKPTNFRVGGYYGSFV*AYIHI
IMNVMNKITSVVKIYKLM*FMHSHLAVQLHKL*IDSYYYHATDDCRNNSFKRNREHRPRE
EVSSKRRRLSTPCTTNL*QVEHKHNINKCILF*R*FEILINCFILLLCSVLVTKKLQLHS
SIDVFPLLRHIHHSRTLQEVVDFIQQL*VCNYCIILQQTLSQYAPYYYKSLNRSVS*VRC
VTHYGR*RIERLMWTTVDLGSSLFX
>LQW192891.x1_2
TAAACVDETGI*A*IGPSPQHCICIFYSIWVRSYSEAYHGTLDSYQRSHYPEIEASAK*L
*LKYFIFVVAGLGLEVV*WRSECQRLRKILFNLFKNWMENQQTLGWADIMVHLFRLTYI*
**ML*IKLLQSLKYIN*CDLCILT*QCNCTSYRLTVIIIMPQMIVGTTVSNVIASIVLGK
KFHPKDEDFQRHVQLIFDRLNINII*INVFYFSGNLKY*SIVLYYFYVQFW*RRNCSYIL
VLMYFHCYVIFTIQERCKKLSISFNNCESVITVSYYSKRCHNTRLTIINHLIGPLVR*DV
*RTMADEGLKG*CGQQLTLDPLYLX
>LQW192891.x1_3
QQLHALMRLGFRPELAHHPNIVYAYSILYG*GRTVRHIMELWIHTRGPITQRLKPVLSDY
NLNISYLLLQVWDWRSCNGGASVRGCARSCSISSRIGWKTNKL*GGRILWFICLGLHTYN
NECYE*NYFSR*NI*INVIYAFSPSSATAQVID*QLLLSCHR*LSEQQFQT*SRASSSGR
SFIQKTKTFNAMYN*SLTG*T*T*YK*MYFILAVI*NTNQLFYITFMFSFGDEETAVTF*
Y*CISIVTSYSPFKNAARSCRFHSTIVSL*LLYHITANVVTIRALLL*IT**VR*LGKMC
NALWQMKD*KADVDNS*PWILSIX

LQW243246.y1 
LQW243246.y1.phd.1 LQW243246.x1 

          11:28:15 2001 TEMPLATE: LQW243246 DIRECTION: rev
          Length = 1014

 Score = 41.4 bits (95), Expect = 0.001
 Identities = 17/24 (70%), Positives = 20/24 (82%)
 Frame = +1

Query: 11 VLAMMYFPLLRHIPPFKNAWDQTL 34
          +L +MYFPLLRHIPPFKNA  + L
Sbjct: 58 ILVLMYFPLLRHIPPFKNACKKLL 129

>LQW243246.y1_1
RLLTWSSFMSVW*RRNAVTILVLMYFPLLRHIPPFKNACKKLLMFISNN*VSSVN*LVIN
ILQEKHD*FTK*TAAF*LFSF*IHPFL*MRFPLISYYG*TKHLVGFNSATF*IFVAKRFW
NTRRTLMRTNPGITLMLFLWR*RNIHLKIHGFM*VGRYLKFLFYMDKVARNASKPDIQAR
IVLSPQHPGCHNPLVTTVFVLCLCLAQEPLNQYQALNPIPGWHTKTNHSLRWTRIYTESR
TLTKLNDYLYXNSRTNHSWSAWLIYFWPDRHEHST*CGGGGLYYPRSEKSSEYITRSGMI
TPDVSXFRYSVRVKLRKQGTNRALRKSPGPSKGQVKSI
>LQW243246.y1_2
DY*PGPHLCQFGDEEMQLPF*Y*CIFHCYVIFHHSRTPARSC*CSFQTIR*VLLINW**I
FYRKNMIDSQNKQQPFNYFHFKFILFYK*GSPLLVIMDKLNIWLDLTLLLFRFLSQRDFG
TQEEP**ERTRGLH*CFSCGDEETFTSRFMVSCKLGDTLSSCSIWIRWQGMLASQTFRPE
LSYHPNTQDATTR**PLCLCYACVLLKNL*ISIKH*IPYLVGTQKPTIHCAGQEYIQKAE
L*QN*TTIFTXIPGRITHGLRG*SISGRTDTSTVHNVGVVAYTIQDQRNHQNTSPVVV*L
PRTCLSSDTRSE*NYGSRARIVR*EKARVPVRARSSR
>LQW243246.y1_3
TTDLVLIYVSLVTKKCSYHSSIDVFSIVTSYSTIQERLQEVVDVHFKQLGEFC*LTGNKY
FTGKT*LIHKINSSLLTIFILNSSFFINEVPPY*LLWIN*TFGWI*LCYFLDFCRKEILE
HKKNLDENEPGDYIDAFLVEMKKHSPQDSWFHVSWEIP*VPVLYG*GGKEC*QARHSGQN
CPITPTPRMPQPVSDHCVCAMLVSCSRTFKSVSSIESHTWLAHKNQPFIALDKNIYRKQN
FNKIKRLSLQXFQDESLMVCVADLFLAGQTRAQYIMWGWWLILSKIREIIRIHHP*WYDY
PGRVXVQILGPSKTTEAGHESCAKKKPGSQ*GPGQVD

>rcicl015b02 
          Length = 682

 Score = 70.6 bits (170), Expect = 1e-11
 Identities = 34/40 (85%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
 Frame = -2

Query: 53  YRCMTLVPLGVQHQTTKDVEISGYCIPKDTVV-SNILSKH 91
           YRCMT VPLGVQHQTTKDVEISGYCIPKDTVV +NI + H
Sbjct: 681 YRCMTXVPLGVQHQTTKDVEISGYCIPKDTVVFTNIDAVH 562

>cicl015b02_3
LINSYSNGYGFGFAEGNKKYMEVRHFTLKALRGFGIGGRVMEERVSEVAQDLVQSLQELD
GKPTNFRMIVGTTVSNVIASIXLGKKXHPKDEDFQRHXQLI

>cieg084m15 
          Length = 602

 Score =  173 bits (435), Expect = 5e-43
 Identities = 86/88 (97%), Positives = 86/88 (97%)
 Frame = +1

Query: 1   LINSYSNGYGFGFAEGNKKYMEVRHFTLKALRGFGIGGRVMEERVSEVAQDLVQSLQELD 60
           LINSYSNGYGFGFAEGNKKYMEVRHFTLKALRGFGIGGRVMEERVSEVAQDLVQSLQELD
Sbjct: 337 LINSYSNGYGFGFAEGNKKYMEVRHFTLKALRGFGIGGRVMEERVSEVAQDLVQSLQELD 516

Query: 61  GKPTNFRMIVGTTVSNVIASIXLGKKXH 88
           GKPTNFRMIVGTTVSNVIASI LGKK H
Sbjct: 517 GKPTNFRMIVGTTVSNVIASIVLGKKFH 600

>cieg084m15_1
MFAKLFGWWGSSWVTTCLLGLLTLVILVYYYWWKLPHPRYPPGVRGIPVMGALPLLGKFA
HKVIMRWSHDKYGPVMSVRFGPSDSVVLNDYESVYEALVKQGPAFLTRPNIELINSYSNG
YGFGFAEGNKKYMEVRHFTLKALRGFGIGGRVMEERVSEVAQDLVQSLQELDGKPTNFRM
IVGTTVSNVIASIVLGKKFHP

LQW57065.x1 
>rcicl015b02 
          Length = 682

 Score = 62.5 bits (149), Expect = 8e-10
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -2

Query: 20  YRCMTLVPLGVQHQTTKDVEISGYCIPK 47
           YRCMT VPLGVQHQTTKDVEISGYCIPK
Sbjct: 681 YRCMTXVPLGVQHQTTKDVEISGYCIPK 598

>rcicl015b02
TTTAGTGCATATGCGGTAGCAGATGAACAACAAAGCAATTAGTAATAAATGAGGTTAGTAAAATAATACTGGGATGCATA
GGCGACAACGTTGAGGTGGCAGGGTGGGCAAGTCTACACTAAAAATATTTGCACTGCGTTAATCAGTAAACATTATAAGC
AGAAAGTTAGATTTGGGGAATATCCCCTTCCCTTGGTTTAAATGTTTTGGGGTTGCTTGGTTGTTCTTGTACCTTTCTGT
TTAAAGTAGTTATTCAGGAATTTCTTCATTTTTCCGTGGAAGGACGACAGCTTTGAAGGGAAACGGGAAGAAACCGAACC
CAGTGATCCCGTCGTCCATTGGAGGAAGATCTTGGCTCTCAGGATCAGGGAGGACCTTGAACCTCTTGATAATGTTGGCA
AGGAAGAGGAAGATCTCAATCCTCGCCAACTTTTCACCAAGACACGATCTGCATCCGATTCCAAACGGGATCACTTTCTT
GGAAGGAATGAACTTCCCGTCTTTATCGATGTGACGATAAATGTTAAACTCGCTCGGATTCTTCCAGATATTTGGATCGT
GGTGAACGGCATCAATGTTTGTGAAAACCACAGTATCTTTAGGGATACAATAACCACTAATCTCTACATCCTTAGTAGTT
TGGTGCTGAACACCCAATGGTACGANGGTCATGCATCGATAA

YRCMTXVPLGVQHQTTKDVEISGYCIPKDTVVFTNIDAVHHDPNIWKNPSEFNIYRHIDK
DGKFIPSKKVIPFGIGCRSCLGEKLARIEIFLFLANIIKRFKVLPDPESQDLPPMDDGIT
GFGFFPFPFKAVVLPRKNEEIPE*

>sequence 44 4 accessions very similar to seq 2, 3 54% to 2U1
probably = seq 2 with three errors corrected below
DLFVAGTETTTSTLRWSILCMIHNPEKQEKLRKEICDVIGE 
DRVPAMNDKAQMPYTCAFMQEVFRYRTLVPLSVVHMTNQDVVLNGYTIPKG
LQW133624.x1  one diff
DEV25023.x1  
LWG1219.x1   
LQW214090.x1 

>sequence 46, 54   33% to CYP1A
MMITAAILLDAGRSFAVPVAFTAVSVLTLYVCLRKRQGIPPGPTAWPLVGNL
FSMGRQSHLILESMRKTYGDVFSVYFGSTLVVVVNGKAVEECLSTHSAR (2)
YSMRPELHTAQYILEGKSFAFSHIAVSKHKRYRTLAVAVVKQLVNGGGEKTDVAV
KHGLQNGTRHSSIEERIFMEAACMCDKLLETSDSPDLKDEILKVITKEL (2)
LSEYELDEISRVVENLRNSNEAIMLVNFIPAVRMLWRNGLQKYIQLTQSLNR (2)
FFERCIRNRKAQLATVSNGHTEDNGVRLTNGVDCTVKFWQKLKNDPQYEESRVMKV (0)
VADLFGARVDTMTVALAWMIVYWSTYQAAQERAQKEIDHFVKNEKRLPR (2)
YSERNQLPYTMALIMEVERHCSFVPFTLPHAPAQDTMLNGYLIPKGTMMLISMRSINHDTAVWDSPAQFR (2)
PERFLLDQSGGFNSALAEQVMLFGAGRRRCAGEALGRMQIFLYSVLFLRKCTFRR
SDKDGHVLPESLAGISLIPQTMCVSISRREADGSKNTEP*
GCiWno803_g11.g1  spans intron 1 at HSAR and YSMR minus strand
GCiWno355_f02.b1  spans intron 2 at KELC and ELDE minus strand
LQW254516.x1      spans intron 3 at SLNR and FFER  plus strand
GCiWno455_p01.g1  spans intron 4 at VMKV and VADL  plus strand
GCiWno455_p01.b1  spans intron 5 at RLPR and YSER
GCiWno1042_f22.b1 spans intron 6 at PAQF and PERF
LQW107672.y1  
LQW148739.x1  
LQW157952.y1  
LQW167870.y1  
LQW235181.y1  
LQW254516.y1 3 DIFFS
LQW270907.y1  
LQW73664.x2   
LQW91169.x1 PKG TO WXXP
cibd040f23
cibd039h22
GCiWno736_g02.g1
Note seq variability in exon 2 but not in other exons 

>GCiWno455_p01.b1_4
SXNSQEKRXXHXXMSLAXTPXLMKKE*KARKNVYMSL*YPR*LTCSALEWTR*PLPSHE*
LSIGPLXKRHKKGHRRKLTTS*KTXNVYRGKGLYSCXFNIYGYYK*RIIHLEH*PLGTVF
ETQCYHHRGCIYSFAHKVT*II*LCFQRKRNVNEIRHPC*NF*SSRPPFFIPLKMVLKIT
LLKQLRKWNQ*QND**ANSIHLFIYSLMECR YSERNQLPYTMALIMEVERHCSFVPFTLP
HAPAQDTMLNGYLIPKGTMMLISMRSINHDTAVWDSPAQFR*VRMI*QM*SVTM*HVLSY
PTLLE
>GCiWno455_p01.b1_5
XQ*PRKEMXPXXXVSCXYPXPYEERIKSSQKRLYVAMIPQVADLFGARVDTMTVALA*MI
VYWSTXQAAQERAQKEIDHFVKNEXRLPR* RFIFLXI*YIWLL*MTYYTPGTLTIGYRVR
DSMLPPQRVYIQLRTQSYIDYITLFSKKTQCE*N*TPVLKLLKLPASFFHSLENGIKDHI
VKTTEKMESIAKRLISEFHTFIYLFINGMQVLRKKSTPVHNGPYNGS*KTL*FRTIYPAT
RPCARHDAKWIFNPERHNDVNQHAVN*PRYCSVGLACSIPVS*NDITDVVGNYVTCSILP
HSTRX
>GCiWno455_p01.b1_6
LPIAKKRDXXMXXCLLLXPXXL*RKNKKLAKTFICRYDTPGS*LVRR*SGHDDRCPRMND
CLLVHXPSGTRKGTEGN*PLREKRXTFTEVKVYIPVXLIYMVIINDVLYTWNINHWVPCS
RLNVTTTEGVYTASHTKLHRLYNFVFKENAM*MKLDTRVKTFKAPGLLFSFP*KWY*RSH
C*NN*ENGINSKTINKRIPYIYLFIH*WNAGTPKEINSRTQWPL*WKLKDIVVSYHLPCH
TPLRKTRC*MDI*SRKAQ*C*SACGQLTTILQCGTRLLNSGKLE*YNRCSR*LCNMFYLT
PLY*X

>GCiWno455_p01.b1
CTCTAGTAGAGTGGGGTAAGATAGAACATGTTACATAGTTACCGACTACATCTGTTATATCATTCTAACTTACCGGAATT
GAGCAGGCGAGTCCCACACTGCAGTATCGTGGTTAATTGACCGCATGCTGATTAACATCATTGTGCCTTTCGGGATTAAA
TATCCATTTAGCATCGTGTCTTGCGCAGGGGCGTGTGGCAGGGTAAATGGTACGAAACTACAATGTCTTTCAACTTCCAT
TATAAGGGCCATTGTGTACGGGAGTTGATTTCTTTCGGAGTACCTGCATTCCATTAATGAATAAATAAATAAATGTATGG
AATTCGCTTATTAATCGTTTTGCTATTGATTCCATTTTCTCAGTTGTTTTAACAATGTGATCTTTAATACCATTTTCAAG
GGAATGAAAAAAGGAGGCCGGGAGCTTTAAAAGTTTTAACACGGGTGTCTAATTTCATTCACATTGCGTTTTCTTTGAAA
ACAAAGTTATATAATCTATGTAACTTTGTGTGCGAAGCTGTATATACACCCTCTGTGGTGGTAACATTGAGTCTCGAACA
CGGTACCCAATGGTTAATGTTCCAGGTGTATAATACGTCATTTATAATAACCATATATATTAAATNTACAGGAATATAAA
CCTTTACCTCGGTAAACGTTNTTCGTTTTTCACGAAGTGGTCAATTTCCTTCTGTGCCCTTTCTTGTGCCGCTTGGNTAG
TGGACCAATAGACAATCATTCATGCGAGGGCAACGGTCATCGTGTCCACTCTAGCGCCGAACAAGTCAGCTACCTGGGGT
ATCATAGCGACATATAAACGTTTTTGCGAGCTTTTTATTCTTTCTTCATAAGGNTNGGGGTANAAGCAAGAGACATNGNT
NCATGGNTNCATCTCTTTTCTTGGCTATTGGNAGA

>GCiWno455_p01.g1
ATTGAATGTTCTTTGTTTACAACCAAATGGAAAGAGAAAACTAAACGAAAAGGTGTCCCATCTTCCCCCACCCTACTATA
CATAAAACGCTTCATTGATCCCTTTTTTTCTGGAACTTAAAAAAAAGGCAAAAAAATGTCATAGAAACAGTTGTGAATAG
TTTTCTTAACTCTCTGTAAAGGTTTTTCGAACGTTGTATACGAAATCGGAAAGCGCAACTCGCAACGGTTTCGAACGGAC
ATACCGAAGATAATGGTGTCCGGCTTACCAACGGTGTTGACTGTACTGTGAAGTTTTGGCAAAAACTAAAGAACGATCCA
CAATACGAAGAAAGCAGAGTCATGAAAGTGGTAAAAAATTTTAAATATTTTAATCTAGTCGATTGTCCGTCATATGTAAA
GGTTTGAACGTTTGGGCATTGATTGCATTTTTGCAATGAAAACATATAGTTATCAAAATGCCACGCCGGTCAGCAAAAGG
ACACAGGAAACACGTTATATTCGTCTTTCGTTTGCCTCTTATTAATACTTTCACGTTTGACATTATAGGCCTTACTGCGG
TATAAGATGGGATACCGTTAGCTACTTTATTTCCTAGTGGTGTTTTTATAACATTTAACAAAGCCTTTTTACAGTCTCGG
GTCTATGGTTATATTTATTCGTAATTATTTTTTATTTACTACCAAATAAGACAAGAAAAGAGAATGAAACAATGAAACAA
TGTCTCTTTGCTTTTACCCAACCCTATGATAGAAAGAATAAAAAGCTCGCAAAACGTTTATATGTCGCTATGATTACCAN
GTAGCTGACTTGNNTCGCGCTAGAGTGGACACGATGACCGTTGCCCTCGCATGGATGAATGTCTATTGGTCCACTTACCN
AGCGCNACAGAAAGGCACAN

>GCiWno455_p01.g1_1
IECSLFTTKWKEKTKRKGVPSSPTLLYIKRFIDPFFSGT*KKGKKMS*KQL*IVFLTLCK
GFSNVVYEIGKRNSQRFRTDIPKIMVSGLPTVLTVL*SFGKN*RTIHNTKKAES*KW*KI
LNILI*SIVRHM*RFERLGIDCIFAMKTYSYQNATPVSKRTQETRYIRLSFASY*YFHV*
HYRPYCGIRWDTVSYFIS*WCFYNI*QSLFTVSGLWLYLFVIIFYLLPNKTRKENETMKQ
CLFAFTQPYDRKNKKLAKRLYVAMITX*LTXXALEWTR*PLPSHG*MSIGPLTXRXRKAX
>GCiWno455_p01.g1_2
LNVLCLQPNGKRKLNEKVSHLPPPYYT*NASLIPFFLELKKKAKKCHRNSCE*FS*LSVK
VFRTLYTKSESATRNGFERTYRR*WCPAYQRC*LYCEVLAKTKERSTIRRKQSHESGKKF
*IF*SSRLSVICKGLNVWALIAFLQ*KHIVIKMPRRSAKGHRKHVIFVFRLPLINTFTFD
IIGLTAV*DGIPLATLFPSGVFITFNKAFLQSRVYGYIYS*LFFIYYQIRQEKRMKQ*NN
VSLLLPNPMIERIKSSQNVYMSL*LPXS*LXSR*SGHDDRCPRMDECLLVHLPSATERH
>GCiWno455_p01.g1_3
*MFFVYNQMEREN*TKRCPIFPHPTIHKTLH*SLFFWNLKKRQKNVIETVVNSFLNSL*R
FFERCIRNRKAQLATVSNGHTEDNGVRLTNGVDCTVKFWQKLKNDPQYEESRVMKVVKNF
KYFNLVDCPSYVKV*TFGH*LHFCNENI*LSKCHAGQQKDTGNTLYSSFVCLLLILSRLT
L*ALLRYKMGYR*LLYFLVVFL*HLTKPFYSLGSMVIFIRNYFLFTTK*DKKRE*NNETM
SLCFYPTL**KE*KARKTFICRYDYXVADLXRARVDTMTVALAWMNVYWSTYXAXQKGT

LQW254516.x1 
LQW254516.x1.phd.1 LQW254516.y1 

          11:53:22 2001 TEMPLATE: LQW254516 DIRECTION: fwd
          Length = 999

 Score = 65.6 bits (157), Expect = 6e-11
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +3

Query: 22 AIMLVNFIPAVRMLWRNGLQKYIQLTQSLNR 52
          AIMLVNFIPAVRMLWRNGLQKYIQLTQSLNR
Sbjct: 36 AIMLVNFIPAVRMLWRNGLQKYIQLTQSLNR 128

Query: 1   FFERCIRNRKAQLATVSNGHTEDNGVRLTNGVDCTVKFWQKLKNDPQYEESRVMKV 56
           FFERCIRNRKAQLATVSNGHTEDNGV LTNGVDCTVKFWQKLKNDPQYEESRVMKV
Sbjct: 412 FFERCIRNRKAQLATVSNGHTEDNGVWLTNGVDCTVKFWQKLKNDPQYEESRVMKV 579

>LQW254516.x1
>lcl|LQW254516.x1 CHROMAT_FILE: LQW254516.x1 PHD_FILE: LQW254516.x1.phd.1 CHEM:
term DYE: ET TIME: Mon Aug 27 11:53:22 2001 TEMPLATE: LQW254516 DIRECTION: fwd 
CAGAAGAAACGGCAGTGCAGCTGCATGCGGTATAGGCGATTATGTTAGTCAATTTTATCCCAGCGGTCCGAATGCTCTGG

AGAAATGGATTACAAAAATATATTCAGTTAACCCAATCGTTAAACAGGTTGGTCTCACTAACTTAGATCTTGCGTAGCGT

TTCTTAATATTTTAGTCCTAAAACCTAGTTACCATTATTTTAAAACTGTGGGCCCCTGTGTAAGAAGCCATGTAGTAAAT

TGTTAAAAAATAAGATTTAATTTGCCATTGGTTTATTGCCGTTCCTGGTTCCCCATATATTAAACGTTTTCTTGATCCCT

TTCTGAACTCATAGGCAAAGAAACTGTCATAGAAACAGTTGTGAATAGCTTTTCTTTATAGTTTACAACCCCAAAAAACT

CTCTGTAAAGGTTTTTCGAACGTTGTATACGAAATCGGAAAGCGCAACTCGCAACGGTTTCGAACGGACATACCGAAGAC

AATGGTGTCTGGCTTACCAACGGTGTTGACTGTACTGTGAAGTTTTGGCAAAAACTAAAGAACGATCCACAATACGAAGA

AAGCAGAGTCATGAAAGTGGTAAAAAAATTTAAATATTTTAATCTAGTCGATTGTCCGTCATATGTAAAGGTTTGAACGT

TTGGGCATTGATTGCATTTTTGCAATGAAAACATATAGTTATCAAAATGCCACGCCGGTCAGCAAAAGGACACAGGAAAC

ACGTTATCTTCGTCTTTCGTTTGCCTCTTATTAATACTTTCACGTATAACATTATAGGCCCTACTGCGGTATACGACTGG

ATCCCGTAGCTACTTATTCCCTGTGGTGTTTTATACCTTAAAAGCCTTTAAAGCCGGGTTAAGGATCAAATGACAATTAT

ATGCTACAAGAAGAAGAATGACATAACATTCTTTGTTCGCCCTATAAAGAAGGTGAGATTTTTAATACAGATATAGATGA

AGAACCTATGAGTCCTCCCAAGAAACTTCAACCTGATTT

>GCiWno355_f02.b1_4
KYSLKRTDN*TGPILPGLIIILYYADIPCVLSFTRHSIYWKGRALHSHI*QYQNTNDTAR
*L*LWLNNLSTAVARKQTLQSNMVCRMERGIALSKKESLWKLLACAKNC*RHQTSLT*KT
KY*RL*QKNCAARQRTCCWEIRKHFANHNYTI**GGGDRTPISSIFSSHLVVNKEKLLKY
KTRSSKTVVNGLKHD*DIGIVCVKGVPSSPTLLYE*YNE*GVLINRLSEYELDEISRVVE
NLRNSNEAIMLVNFIPAV*MLWRNGLPKYTLVSLIVRQ*RMIVPYVLPANSL*ST
>GCiWno355_f02.b1_5
IFFKED*QLNWSHLTRANYHFVLCRYSMRPELHTAQYILEGKSFAFSHIAVSKHKRYRTL
AVAVVKQLVNGGGEKTDVAVKHGLQNGTRHSSIEERIFMEAACMCEKLLETSDKPDLKNE
ILKVITKELCRSAADMLLGNT*AFCKS*LYYIIGWGR*DTYFFYFLVPFGSKQRKVTEI*
NQILKDRC*WFKTRLGYWDSMC*RCPIFPHPTI*II**IRCFD*QAVRV*T**NFSCGRK
LA*FK*GDYVSQFYPSGLNALEKWITKIYSGFPDRQTVTHDRAVRFTGKQPMIHX
>GCiWno355_f02.b1_6
NIL*RGLTIELVPSYPG*LSFCIMQIFHAS*ASHGTVYIGREELCILTYSSIKTQTIPHV
SCSCG*TTCQRRWRENRRCSQTWSAEWNAA*LYRRKNLYGSCLHVRKTVRDIRQA*PEKR
NTEGYNKRTVPLGSGHAAGKYVSILQIITILYNRVGEIGHLFLLFSRPIW**TKKSY*NI
KPDPQRPLLMV*NTIRILG*YVLKVSHLPPPYYMNNIMNKVF*LTGCPSMNLMKFLVW*K
TCVIQMRRLC*SILSQRSECSGEMDYQNILWFP*SSDSDA*SCRTFYRQTAYDPX

>GCiWno355_f02.b1
TGTGGATCATAGGCTGTTTGCCGGTAAAACGTACGGCACGATCATGCGTCACTGTCTGACGATCAGGGAAACCAGAGTAT
ATTTTGGTAATCCATTTCTCCAGAGCATTCAGACCGCTGGGATAAAATTGACTAACATAATCGCCTCATTTGAATTACGC
AAGTTTTCTACCACACGAGAAATTTCATCAAGTTCATACTCGGACAGCCTGTTAATCAAAACACCTTATTCATTATATTA
TTCATATAGTAGGGTGGGGGAAGATGGGACACCTTTAACACATACTATCCCAATATCCTAATCGTGTTTTAAACCATTAA
CAACGGTCTTTGAGGATCTGGTTTTATATTTCAGTAACTTTTCTTTGTTTACTACCAAATGGGACGAGAAAATAGAAGAA
ATAGGTGTCCTATCTCCCCCACCCTATTATATAGTATAGTTATGATTTGCAAAATGCTTACGTATTTCCCAGCAGCATGT
CCGCTGCCGAGCGGCACAGTTCTTTTGTTATAACCTTCAGTATTTCGTTTTTCAGGTCAGGCTTGTCTGATGTCTCTAAC
AGTTTTTCGCACATGCAAGCAGCTTCCATAAAGATTCTTTCTTCGATAGAGCTATGCCGCGTTCCATTCTGCAGACCATG
TTTGACTGCAACGTCTGTTTTCTCGCCACCGCCGTTGACAAGTTGTTTAACCACAGCTACAGCTAACGTGCGGTATCGTT
TGTGTTTTGATACTGCTATATGTGAGAATGCAAAGCTCTTCCCTTCCAATATATACTGTGCCGTGTGAAGCTCAGGACGC
ATGGAATATCTGCATAATACAAAATGATAATTAGCCCGGGTAAGATGGGACCAGTTCAATTGTCAGTCCTCTTTAAAGAA
TATTT

>GCiWno803_g11.g1_4
KIRSRFL*HSLLFLF*RCMCAYEKDRASSPVPQPGHWSAICSLWVDKATSY*RACGKPTA
TCSQSTLAQL*WSLSMVKRLRNACQHILQGNKLWELQNLFAIY*CRTVG*DVITLT*NRR
FPNRVFNN*RRSFRVCYINL*IFFKED*QFDLSHLTPAYYTFFIMQIFHAS*ASHGTVYI
GREELCILTYSSIKTQTIPHVSCSCG*TTCQRRWRENRRCSQTWSAEWNAA*LYRRKNLY
GSCLHVR*TVRDIRQA*PERRNTEGHNKRTVPLGSGVRAE
>GCiWno803_g11.g1_5
EDPFAVPVAFTAVSVLTLYVCLRKRQGILXGPTAWPLVGNLFSMGRQSHLILESMRKTYG
DVFSVYFGSTLVVVVNGKAVEECLSTHSAR *QIMGTTKPIRNLLMSHCGVRCNNFNIKSQ
IP*SCF*QLTTLF*SLLYKFVNIL*RGLTI*LVPSYPGLLYIFYYADIPCVLSFTRHSIY
WKGRALHSHI*QYQNTNDTAR*L*LWLNNLSTAVARKQTLQSNMVCRMERGIALSKKESL
WKLLACAINC*RHQTSLT*KTKY*RS*QKNCAARQRGPS*X
>GCiWno803_g11.g1_6
*RSVRGSCSIHCCFCSDAVCVPTKKTGHPXRSHSLAIGRQFVLYGSTKPPHIREHAENLR
RRVLSLLWLNFSGRCQW*SG*GMPVNTFCKVTNYGNYKTYSQFTNVALWGKM**L*HKIA
DSLIVFLTINDALLESVI*ICKYSLKRTDNLTCPILPRPIIHFLLCR YSMRPELHTAQYI
LEGKSFAFSHIAVSKHKRYRTLAVAVVKQLVNGGGEKTDVAVKHGLQNGTRHSSIEERIF
MEAACMCDKLLETSDKPDLKDEILKVITKELCRSAAGSELX

>GCiWno803_g11.g1
TTCAGCTCGGACCCCGCTGCCGAGCGGCACAGTTCTTTTGTTATGACCTTCAGTATTTCGTCTTTCAGGTCAGGCTTGTC
TGATGTCTCTAACAGTTTATCGCACATGCAAGCAGCTTCCATAAAGATTCTTTCTTCGATAGAGCTATGCCGCGTTCCAT
TCTGCAGACCATGTTTGACTGCAACGTCTGTTTTCTCGCCACCGCCGTTGACAAGTTGTTTAACCACAGCTACAGCTAAC
GTGCGGTATCGTTTGTGTTTTGATACTGCTATATGTGAGAATGCAAAGCTCTTCCCTTCCAATATATACTGTGCCGTGTG
AAGCTCAGGACGCATGGAATATCTGCATAATAAAAAATGTATAATAGGCCGGGGTAAGATGGGACAAGTCAAATTGTCAG
TCCTCTTTAAAGAATATTTACAAATTTATATAACAGACTCTAAAAGAGCGTCGTTAATTGTTAAAAACACGATTAGGGAA
TCTGCGATTTTATGTTAAAGTTATTACATCTTACCCCACAGTGCGACATTAGTAAATTGCGAATAGGTTTTGTAGTTCCC
ATAATTTGTTACCTTGCAGAATGTGTTGACAGGCATTCCTCAACCGCTTTACCATTGACAACGACCACTAAAGTTGAGCC
AAAGTAGACTGAGAACACGTCGCCGTAGGTTTTCCGCATGCTCTCTAATATGAGGTGGCTTTGTCGACCCATAGAGAACA
AATTGCCGACCAATGGCCAGGCTGTGGGACCGGNGAGGATGCCCTGTCTTTTTCGTAGGCACACATACAGCGTCAGAACA
GAAACAGCAGTGAATGCTACAGGAACCGCGAACGGATCTTCA

>cibd045a01 
          Length = 664

 Score = 55.8 bits (132), Expect(2) = 1e-10
 Identities = 25/26 (96%), Positives = 26/26 (99%)
 Frame = +2

Query: 12  LQNGTRHSSIEERIFMEAACMCDKLL 37
           LQNGTRHSSIEERIFMEAACMC+KLL
Sbjct: 587 LQNGTRHSSIEERIFMEAACMCEKLL 664


 Score = 27.8 bits (60), Expect(2) = 1e-10
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +1

Query: 1   WRENRRCSQT 10
           WRENRRCSQT
Sbjct: 553 WRENRRCSQT 582

>cibd045a01
GGGAATGTTGCGCAAAGCACAGACGGGAAACTGTACTGTGACGTCATTACTTCCCCAGAGCAAACACTGATCGGAATTGC
AAACAGAATTATTGCCGCTTGCTGTCTGCATGATGATCACCGCCGCAATTTTGCTCGACGCTGGAAGATCGTTCGCGGTT
CCTGTAGCATTCACTGCTGTTTCTGTTCTGACGCTGTATGTGTGCCTACGAAAAAGACAGGGCATCCCTCCCGGTCCCAC
AGCCTGGCCATTGGTCGGCAATTTGTTCTCTATGGGTCGACAAAGCCACCTCATATTAGAGAGCATGCGGAAAACCTACG
GCGACGTGTTCTCAGTCTACTTTGGCTCAACTTTAGTGGTCGTTGTCAATGGTAAAGCGGTTGAGGAATGCCTGTCAACA
CATTCTGCAAGATATTCCATGCGTCCTGAGCTTCACACGGCACAGTATATATTGGAAGGGAAGAGCTTTGCATTCTCACA
TATAGCAGTATCAAAACACAAACGATACCGCACGTTAGCTGTAGCTGTGGTTAAACAACTTGTCAACGGCGGTGGCGAGA
AAACAGACGTTGCAGTCAAACATGGTCTGCAGAATGGAACGCGGCATAGCTCTATCGAAGAAAGAATCTTTATGGAAGCT
GCTTGCATGTGCGAAAAACTGTTA

MMITAAILLDAGRSFAVPVAFTAV
                              SVLTLYVCLRKRQGIPPGPTAWPLVGNLFSMGRQSHLILESMRKTYGDVFSVYFGSTLVV
                              VVNGKAVEECLSTHSARYSMRPELHTAQYILEGKSFAFSHIAVSKHKRYRTLAVAVVKQL
                              VNGGGEKTDVAVKHGLQNGTRHSSIEERIFMEAACMCEKLL

>_1
                              GNVAQSTDGKLYCDVITSPEQTLIGIANRIIAACCLHDDHRRNFARRWKIVRGSCSIHCC
                              FCSDAVCVPTKKTGHPSRSHSLAIGRQFVLYGSTKPPHIREHAENLRRRVLSLLWLNFSG
                              RCQW*SG*GMPVNTFCKIFHAS*ASHGTVYIGREELCILTYSSIKTQTIPHVSCSCG*TT
                              CQRRWRENRRCSQTWSAEWNAA*LYRRKNLYGSCLHVRKTVX
                              >_2
                              GMLRKAQTGNCTVTSLLPQSKH*SELQTELLPLAVCMMITAAILLDAGRSFAVPVAFTAV
                              SVLTLYVCLRKRQGIPPGPTAWPLVGNLFSMGRQSHLILESMRKTYGDVFSVYFGSTLVV
                              VVNGKAVEECLSTHSARYSMRPELHTAQYILEGKSFAFSHIAVSKHKRYRTLAVAVVKQL
                              VNGGGEKTDVAVKHGLQNGTRHSSIEERIFMEAACMCEKLL
                              >_3
                              ECCAKHRRETVL*RHYFPRANTDRNCKQNYCRLLSA**SPPQFCSTLEDRSRFL*HSLLF
                              LF*RCMCAYEKDRASLPVPQPGHWSAICSLWVDKATSY*RACGKPTATCSQSTLAQL*WS
                              LSMVKRLRNACQHILQDIPCVLSFTRHSIYWKGRALHSHI*QYQNTNDTAR*L*LWLNNL
                              STAVARKQTLQSNMVCRMERGIALSKKESLWKLLACAKNC

>GCiWno736_g02.b1
AGTCAGTGTGCATGAAATTTAACGCGTCAGATCAATCAACATAGCTTTCATGTGTCGTTGTCACAAGTCCTATCACCTCA
TGCACTTCGAAAGAAAGCGCTCATTCTCTTGTAACTTGACTCAAGTATGACACGCCAGGCGACGCCATTCGGGGCTAATA
TTTCGACATTCCTCTTAGGCGTTACGGCTGAGCAGTCACGACCTTTCTGAGTTCATCGGCCGAGAGACTGAAGGAACGAA
CGATTATTTGCCCCTGTAAAGGCACATAGGTGTGAGGCGGCCGCAAAGCTTTACTCTACATTTATCATAGTAGACGAGTT
ATAGACAGATCGTATAAATGGCTGCGTCAGCCTACGTTGTTTTTGCAAGCAGCTAAACGTTCAGGCCGATTTATTGCCAA
AGCAAACCCTTAACACAGGAGAGTACAACGGGCAAATGTGGCGAGACAAGCAAACAAAGTCGTAAATTTAAACTTTAACA
GTCACTGTTGCGCTTGTAAACTTTATGAGTTGTCAGGTACCATTTGTAATATGCGAAGGTAGAATGAAGCGACTGTATAT
CGGTGTAGGCAACCACATCAGAAGGGTTTTGCCCGAGGTATTGTAGGCGATACAAAAGATAGACTAACACGGGATAATGA
CAGTAAATACATTAACTCACGTCTCGTGCAATGTTTATTATTATGTTAGTTTATTTTCGGATGCATTCGCTTAGTCTGAG
CATAATACAGCTGTTTATGTATTATTTATGTACACCACAGGGGTATACGCATAGAATGTTGCGCAAAGCACAGACGGGGA
ACTGTACTGTGACGTCATTACTTCCCCAGAGTAACACTGATCGGAATTGCAACAGAATAAN
>GCiWno736_g02.g1
TCAGCTCGGACCCTCCCATCTTCTCCAACCCTACTATATATAGGGGAACCAAAAATGGCAAGAAATTAATGGCAAATTAA
ACCTTGTTTTTTAAACATGGATGAGTAAACACAATTTACTACATGGCTTCTTACACAGGGGCCCACAGTTTTAAAATAAT
GGTAACTAGGTTTTAGGACTAAAATATTAAGAAACGCTACGCAAGATCTAAGTTAGTGAGACCAACCTGTTTAACGATTG
AGTTAACTGAATATATTTTTGTAATCCATTTCTCCAGAGCATTCGGACCGCTGGGATAAAATTGACTAACATAATCGCCT
CATTTGAATTACGCAAGTTTTCTACCACACGAGAAATTTCGTCAAGTTCATACTCGGACAGCCTGTTAATAAGAACACAT
TATTCATTATATTATTCATATAGTAGGGTAGGGAAGGACCGGACACCTTTAACACATACTATCCCAATATCCTAATCGTG
TTTTAAACAATTAACAACGGTCTTTGAGGGTCTGGTTTTATATTTCATTAAATTTTATTTGTTTACTACCAAATGGGACG
AAAAAATAGAAGAAATAGGTGTCCCATCTCCCCTACCCTATTATATAGTATAGTTATGATTTGCAAAATGCTTACGTATT
TCCCAGCAGCATGTCCGCTGCCGAGCGGCACAGTTCTTTTGTTATGACCTTCAGTATTTCGTCTTTCAGGTCAGGCGAGT
CTGATGTCTCTAACAGTTTATCGCACATGCAAGCAGCTTCCATAAAGATTCTTTCTTCGATAGAGCTATGCCGCGTTCCA
TTCTGCAGACATGTTTGACTGCATCGCCTGTTTTCTCGCCACCGCCGNTGACAGTTGTTTACCACAGCTACAGCTACGTG
CGGNATCGTTTGTGTCTGATA

>_4
                              IRHKRXRT*L*LW*TTVXGGGEKTGDAVKHVCRMERGIALSKKESLWKLLACAINC*RHQ
                              TRLT*KTKY*RS*QKNCAARQRTCCWEIRKHFANHNYTI**GRGDGTPISSIFSSHLVVN
                              K*NLMKYKTRPSKTVVNCLKHD*DIGIVCVKGVRSFPTLLYE*YNE*CVLINRLSEYELD
                              EISRVVENLRNSNEAIMLVNFIPAVRMLWRNGLQKYIQLTQSLNRLVSLT*ILRSVS*YF
                              SPKT*LPLF*NCGPLCKKPCSKLCLLIHV*KTRFNLPLISCHFWFPYI**GWRRWEGPS*
                              >_5
                              YQTQTXPHVAVAVVNNCXRRWRENRRCSQTCLQNGTRHSSIEERIFMEAACMCDKLLETS
                              DSPDLKDEILKVITKELCRSAADMLLGNT*AFCKS*LYYIIG*GRWDTYFFYFFVPFGSK
                              QIKFNEI*NQTLKDRC*LFKTRLGYWDSMC*RCPVLPYPTI*II**IMCSY*QAVRV*T*
                              RNFSCGRKLA*FK*GDYVSQFYPSGPNALEKWITKIYSVNSIVKQVGLTNLDLA*RFLIF
                              *S*NLVTIILKLWAPV*EAM**IVFTHPCLKNKV*FAINFLPFLVPLYIVGLEKMGGSEL
                              X
                              >_6
                              SDTNDXARSCSCGKQLSXAVARKQAMQSNMSAEWNAA*LYRRKNLYGSCLHVR*TVRDIR
                              LA*PERRNTEGHNKRTVPLGSGHAAGKYVSILQIITILYNRVGEMGHLFLLFFRPIW**T
                              NKI**NIKPDPQRPLLIV*NTIRILG*YVLKVSGPSLPYYMNNIMNNVFLLTGCPSMNLT
                              KFLVW*KTCVIQMRRLC*SILSQRSECSGEMDYKNIFS*LNR*TGWSH*LRSCVAFLNIL
                              VLKPSYHYFKTVGPCVRSHVVNCVYSSMFKKQGLICH*FLAIFGSPIYSRVGEDGRVRAX
>citb005f11 
          Length = 393

 Score = 58.2 bits (138), Expect = 5e-09
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 1   LRNSNEAIMLVNFIPAVRMLWRNGLQK 27
           LRNSNEAIMLVNFIPAVRMLWRNGLQK
Sbjct: 308 LRNSNEAIMLVNFIPAVRMLWRNGLQK 388

>citb005f11
TTCGGCACGAGGGCATTTTGCAAATCATAACTATACTATATAATAGGGTGGGGGAGATAGGACACCTATTTCTTCTATTT
TCTCGTCCCATTTGGTAGTAAACAAAGAAAAGTTACTGAAATATAAAACCAGATCCTCAAAGACCGTTGTTAATGGTTTA
AAACACGATTAGGATATTGGGATAGTATGTGTTAAAGGTGTCCCATCTTCCCCCACCCTACTATATGAATAATATAATGA
ATAAGGTGTTTTGATTAACAGGCTGTCCGAGTATGAACTTGATGAAATTTCTCGTGTGGTAGAAAACTTGCGTAATTCAA
ATGAGGCGATTATGTTAGTCAATTTTATCCCAGCGGTCCGAATGCTCTGGAGAAATGGATTACAAAAAAAAAA

>_1
                              FGTRAFCKS*LYYIIGWGR*DTYFFYFLVPFGSKQRKVTEI*NQILKDRC*WFKTRLGYW
                              DSMC*RCPIFPHPTI*II**IRCFD*QAVRV*T**NFSCGRKLA*FK*GDYVSQFYPSGP
                              NALEKWITKKK
                              >_2
                              SARGHFANHNYTI**GGGDRTPISSIFSSHLVVNKEKLLKYKTRSSKTVVNGLKHD*DIG
                              IVCVKGVPSSPTLLYE*YNE*GVLINRLSEYELDEISRVVENLRNSNEAIMLVNFIPAVR
                              MLWRNGLQKK
                              >_3
                              RHEGILQIITILYNRVGEIGHLFLLFSRPIW**TKKSY*NIKPDPQRPLLMV*NTIRILG
                              *YVLKVSHLPPPYYMNNIMNKVF*LTGCPSMNLMKFLVW*KTCVIQMRRLC*SILSQRSE
                              CSGEMDYKKK
>rcitb005f11 
          Length = 354

 Score = 38.3 bits (87), Expect = 0.005
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -3

Query: 1  LRNSNEAIMLVNFIPAVRM 19
          LRNSNEAIMLVNF PAVRM
Sbjct: 58 LRNSNEAIMLVNFXPAVRM 2

>rcitb005f11
GCATTCGGACCGCTGGGNTAAAATTGACTAACATAATCGCCTCATTTGAATTACGCAAGTTTTCTACCACACGAGAAATT
TCATCAAGTTCATACTCGGACAGCCTGTTAATCAAAACACCTTATTCATTATATTATTCATATAGTAGGGTGGGGGAAGA
TGGGACACCTTTAACACATACTATCCCAATATCCTAATCGTGTTTTAAACCATTAACAACGGTCTTTGAGGATCTGGTTT
TATATTTCAGTAACTTTTCTTTGTTTACTACCAAATGGGACGAGAAAATAGAAGAAATAGGTGTCCTATCTCCCCCACCC
TATTATATAGTATAGTTATGATTTGCAAAATGCC

>cibd040f23 
          Length = 716

 Score =  103 bits (255), Expect = 1e-22
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = +3

Query: 1   VADLFGARVDTMTVALAWMIVYWSTYQAAQERAQKEIDHFVKNEKRLPR 49
           VADLFGARVDTMTVALAWMIVYWSTYQAAQERAQKEIDHFVKNEKRLPR
Sbjct: 282 VADLFGARVDTMTVALAWMIVYWSTYQAAQERAQKEIDHFVKNEKRLPR 428
>cibd040f23
ACTTGCGTAATTCAAATGAGGCGATTATGTTAGTCAATTTTATCCCAGCGGTCCGAATGCTCTGGAGAAATGGATTACAA
AAATATATTCAGTTAACCCAATCGTTAAACAGGTTTTTCGAACGTTGTATACGAAATCGGAAAGCGCAACTCGCAACGGT
TTCGAACGGACATACCGAAGACAATGGTGTCCGGCTTACCAACGGTGTTGACTGTACTGTGAAGTTTTGGCAAAAACTAA
AGAACGATCCACAATACGAAGAAAGCAGAGTCATGAAAGTGGTAGCTGACTTGTTCGGCGCTAGAGTGGACACGATGACC
GTTGCCCTCGCATGGATGATTGTCTATTGGTCCACTTACCAGGCGGCACAAGAAAGGGCACAGAAGGAAATTGACCACTT
CGTGAAAAACGAAAAACGTTTACCGAGGTACTCCGAAAGAAATCAACTCCCGTACACAATGGCCCTTATAATGGAAGTTG
AAAGACATTGTAGTTTCGTACCATTTACCCTGCCACACGCCCCTGTGCAAGACACGATGCTAAATGGATATTTAATCCCG
AAAGGCACAATGATGTTAATCAGCATGCGGTCAATTAACCACGATACTGCAGTGTGGGACTCGCCTGCTCAATTCCGACC
TGAAAGATTCCTTTTGGATCAGTCTGGAGATTTTAACAGCGCATTGGCGGAACAAGTTATGCTGTTTGGTGCTGGG

>cibd040f23_3
                              LRNSNEAIMLVNFIPAVRMLWRNGLQKYIQLTQSLNRFFERCIRNRKAQLATVSNGHTED
                              NGVRLTNGVDCTVKFWQKLKNDPQYEESRVMKV VADLFGARVDTMTVALAWMIVYWSTYQ
                              AAQERAQKEIDHFVKNEKRLPRYSERNQLPYTMALIMEVERHCSFVPFTLPHAPVQDTML
                              NGYLIPKGTMMLISMRSINHDTAVWDSPAQFRPERFLLDQSGDFNSALAEQVMLFGAG
>cibd039h22 
          Length = 689

 Score =  103 bits (255), Expect = 1e-22
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = +3

Query: 1   VADLFGARVDTMTVALAWMIVYWSTYQAAQERAQKEIDHFVKNEKRLPR 49
           VADLFGARVDTMTVALAWMIVYWSTYQAAQERAQKEIDHFVKNEKRLPR
Sbjct: 282 VADLFGARVDTMTVALAWMIVYWSTYQAAQERAQKEIDHFVKNEKRLPR 428

>GCiWno613_n09.b1
GGATCCCCATATAGTATGGCCAGAAAATCACAAAATAAAGAAAAAGGCAGCAGTTTCCCGCATGACAAAAAATGGCAAAA
ACTAAAAGGTCCTGATGTTATTTAGAATCAACTACTTGGATAACTAACACTGTCGCGAAAAGCGTGACCGCTACAGCCAC
ATCTTCATCACGGCTCGGTGTTTTTAGAACCGTCGGCCTCCCGCCGTGAGATGGACACGCACATAGTTTGAGGGATTAAC
GAAATTCCGGCCAAGGATTCGGGCAAAACGTGGCCATCCTTGTCGCTGCGTCGAAACGTACATTTTCTTAGGAATAGGAC
CGAGTAAAGAAATATCTGCATACGTCCTAATGCCTCCCCTGCGCACCGTCGCCTCCCAGCACCAAACAGCATAACTTGTT
CCGCCAATGCGCTGTTAAAACCTCCAGACTGATCCAAAAGGAATCTTTCAGGTCTACAAGTTATTCCACGTTTGAAGTAC
ATAATGGGTAAGTACATAGACGATGCAAGAAAGAGAGAAGAAATCCAGAGATGTATGCTAGAGTTCACCCAATCCATTAC
CCCCAGCATATTCTATATTACCCCCGCAGCCCATTAGTCCGGAGATTAAGCTGGAAGTTGTCCCATTACCCCAGCATAAC
CTATTCTGTATGGGCGAGGCCCTACACAGCGCGACACGCAATATGTCCTGACATTGGGCCGAAGTTGTCTCATTACCCAA
GCATAACCTATTCTATATTGGCGAGGTTCTATATGGTTCGACACGCCTAAGATTCAGGTCAGAGTTGACACTATACCCTA
NACACACCTAAAACACTATTACGTTAAATCTTCCTATAGTAGTATATCCTCTAGTAGAGTGGGGTAAGATAGAACATGTT
ACATAGTTAC

>_4
NYVTCSILPHSTRGYTTIGRFNVIVF*VCXGYSVNSDLNLRRVEPYRTSPI*NRLCLGNE
TTSAQCQDILRVALCRASPIQNRLCWGNGTTSSLISGLMGCGGNIEYAGGNGLGEL*HTS
LDFFSLSCIVYVLTHYVLQTWNNL*T*KIPFGSVWRF*QRIGGTSYAVWCWEATVRRGGI
RTYADISLLGPIPKKMYVSTQRQGWPRFARILGRNFVNPSNYVRVHLTAGGRRF*KHRAV
MKMWL*RSRFSRQC*LSK*LILNNIRTF*FLPFFVMRETAAFFFIL*FSGHTIWGS
>_5
*LCNMFYLTPLY*RIYYYRKI*RNSVLGVXRV*CQL*PES*ACRTI*NLANIE*VMLG**
DNFGPMSGHIACRAV*GLAHTE*VMLG*WDNFQLNLRTNGLRG*YRICWG*WIG*TLAYI
SGFLLSFLHRLCTYPLCTSNVE*LVDLKDSFWISLEVLTAHWRNKLCCLVLGGDGAQGRH
*DVCRYFFTRSYS*ENVRFDAATRMATFCPNPWPEFR*SLKLCACPSHGGRPTVLKTPSR
DEDVAVAVTLFATVLVIQVVDSK*HQDLLVFAIFCHAGNCCLFLYFVIFWPYYMGIX
>_6
VTM*HVLSYPTLLEDILL*EDLT**CFRCV*GIVSTLT*ILGVSNHIEPRQYRIGYAWVM
RQLRPNVRTYCVSRCVGPRPYRIGYAGVMGQLPA*SPD*WAAGVI*NMLGVMDWVNSSIH
LWISSLFLASSMYLPIMYFKRGITCRPERFLLDQSGGFNSALAEQVMLFGAGRRRCAGEA
LGRMQIFLYSVLFLRKCTFRRSDKDGHVLPESLAGISLIPQTMCVSISRREADGSKNTEP
**RCGCSGHAFRDSVSYPSS*F*ITSGPFSFCHFLSCGKLLPFSLFCDFLAILYGDP


>GCiWno613_n09.g1
TCGGACCCCATTTAGGCCTTACTGCGGTATAGATGGGATACCGTTAGCTACTTTATTTCCTAGTGGTGTTTTTATAACAT
TTAACAAAGCCTTTTTACAGTCTCGGGTCTATGGTTATATTTATTCGTAATTATTTTTTATTTACTACCAAATAAGACAA
GAAAAGAGAATGAAACAATGAAACAATGTCTCTTTGCTTTTACCCAACCCTATGATAGAAAGAATAAAAAGCTCGCAAAA
CGTTTATATGTCGCTATGATTACCAGGTAGCTGACTTGTTCGGCGCTAGAGTGGACACGATGACCGTTGCCCTCGCATGG
ATGATTGTCTATTGGTCCACTTACCAAGCGGCACAAGAAAGGGCACAGAAGGAAATTGACCACTTCGTGAAAAACGAAAA
ACGTTTACCGAGGTAAAGGTTTATATTCCTGTAAATTTAATATATATGGTTATTATAAATGACGTATTATACACCTGGAA
CATTAACCATTGGGTACCGTGTTCGAGACTCAATGTTACCACCACAGAGGGTGTATATACAGCTTCGCACACAAAGTTAC
ATAGATTATATAACTTTGTTTTCAAAGAAAACGCAATGTGAATGAAATTAGACACCCGTGTTAAAACTTTTAAAGCTCCC
GGCCTCCTTTTTTCATTCCCTTGAAAATGGTATTAAAGATCACATTGTTAAAACAACTGAGAAAATGGAATCAATAGCAA
AACGATTAATAAGCGAATTCCATACATTTATTTATTTATTCATTAATGGAATGCAGGTACTCCGAAAGAAATCAACTCCC
GTACACAATGGCCCTTATNATGGGAGNTGAAAGACATTNGTAGTTTCGTACCATTTACCCCTGCC
>_1
SDPI*ALLRYRWDTVSYFIS*WCFYNI*QSLFTVSGLWLYLFVIIFYLLPNKTRKENETM
KQCLFAFTQPYDRKNKKLAKRLYVAMITR*LTCSALEWTR*PLPSHG*LSIGPLTKRHKK
GHRRKLTTS*KTKNVYRGKGLYSCKFNIYGYYK*RIIHLEH*PLGTVFETQCYHHRGCIY
SFAHKVT*II*LCFQRKRNVNEIRHPC*NF*SSRPPFFIPLKMVLKITLLKQLRKWNQ*Q
ND**ANSIHLFIYSLMECRYSERNQLPYTMALXMGXERHX*FRTIYPCX
>_2
RTPFRPYCGIDGIPLATLFPSGVFITFNKAFLQSRVYGYIYS*LFFIYYQIRQEKRMKQ*
NNVSLLLPNPMIERIKSSQNVYMSL*LPGS*LVRR*SGHDDRCPRMDDCLLVHLPSGTRK
GTEGN*PLREKRKTFTEVKVYIPVNLIYMVIINDVLYTWNINHWVPCSRLNVTTTEGVYT
ASHTKLHRLYNFVFKENAM*MKLDTRVKTFKAPGLLFSFP*KWY*RSHC*NN*ENGINSK
TINKRIPYIYLFIH*WNAGTPKEINSRTQWPLXWEXKDIXSFVPFTPA
>_3
GPHLGLTAV*MGYR*LLYFLVVFL*HLTKPFYSLGSMVIFIRNYFLFTTK*DKKRE*NNE
TMSLCFYPTL**KE*KARKTFICRYDYQ VADLFGARVDTMTVALAWMIVYWSTYQAAQER
AQKEIDHFVKNEKRLPR*RFIFL*I*YIWLL*MTYYTPGTLTIGYRVRDSMLPPQRVYIQ
LRTQSYIDYITLFSKKTQCE*N*TPVLKLLKLPASFFHSLENGIKDHIVKTTEKMESIAK
RLISEFHTFIYLFINGMQVLRKKSTPVHNGPYXGX*KTXVVSYHLPL

>sequence 48 1 accession 485 to 2R1
VSVNLWAVHNDPNTWEEPSMFKPERHLDESGHFVQSKHVIPFSVGPRHCVGEQLARMEVFIYLVSMVQKF
EFLPDRNANELPDIEKGSNGPAFVPQMFDIVAKVI
LQW214701.x2
DEV4898.x1 PERF
rcilv059c22

>rcilv059c22 
          Length = 752

 Score =  209 bits (526), Expect = 1e-53
 Identities = 98/105 (93%), Positives = 100/105 (94%)
 Frame = -3

Query: 1   VSVNLWAVHNDPNTWEEPSMFKPERHLDESGHFVQSKHVIPFSVGPRHCVGEQLARMEVF 60
           VSVNLWAVHNDPNTWE PSMFKPERHLDESGHFVQSKHVIPFSVGPRHCVGEQLARMEVF
Sbjct: 705 VSVNLWAVHNDPNTWEXPSMFKPERHLDESGHFVQSKHVIPFSVGPRHCVGEQLARMEVF 526

Query: 61  IYLVSMVQKFEFLPDPDVTELPDIEQGSNGPAFVPQMLDIVAKVI 105
           IYLVSMVQKFEFLPD +  ELPDIE+GSNGPAFVPQM DIVAKVI
Sbjct: 525 IYLVSMVQKFEFLPDRNANELPDIEKGSNGPAFVPQMFDIVAKVI 391

>sequence 49, 67 opp end of clone is seq 67 join together
MLVQILTATFWTLIP
NSFGDLLIYAILVLTIVIYVKSLKRDKEWLALPGPIPW PLVGNA PFLGAEPHKKLLELSL
KYGPVYRLKMGGIKTVVLCNAEVVRSALIKQREAFSGRPKFSSYKAVS AGESVVFNDEET
LPP WRSH KSKIVRHMHKYTTSIRTRDKVTDLINTECMMMVTELDRISRSKCVNPENVIRM
ALANVMCAVCFGNRFEYDNE (0) 
EFQKLLSMNTEFGAVIELGPIIDAMPWIK (0)
VIPKFKKAIADYLKINLQLDTWSRHR (2)
VDGVLKTFDNDDVTNVVASMTSEVLEKKSAGESREITESETKTIAALSADILGA 
GQHTTSTTFFWVINLLLCFPKVLNKLTEEVRSKLGNRLPTLEDRTSLPYMDAVLTE 
VLRFSSPLSSTIPHSTLKDVKLAGHTIKRGTMVIISQYAVNHDPQNWKNPENFDPERFLTK
NEGGEIIFNESLSEKVLAFSIGERKCPGSQLSRMLLFLATTLLVQVSDLSADLERPPT
AAAEYGLILRPKHLSIKLTLREHWQRRDSIRA*

>CYP1B1 Scaffold_1553 complete gene Scaffold_11030 Scaffold_10662   
54% TO 1B1 human 51% to 1B1 mouse
AL024920.1 AL015454.1 cosmid 077P23 80% to CYP1B from pleuronectes platessa
FC:C013F14aE4 LGU7740.y1 FC:C077P23aC12 AL015446.1 077P23 FC:C077P23aD8
2460 MKVIQEEVSPEAGALLLACATLLVSLQLWRWRRRRPGGCPPGPRAWPIIGNAAQLGHAPHL 2278
2277 YFTRMAQRFGNVFQIKLGSRTVVVLNGDAIKQALVRKGLEFAGRPDFTSFKYISNGHSL 2101
2100 AFGTVTDWWKSHRRVAQSTVRMFSTGNLQTKKTFERHLTCEVRELLHLFLGKTKELQYFQ 1921
1920 PMNYLVVSTANVISAVCFGKRYSYEDEEFQQVVGRNDQFTRTVGAGSIVDVMPWL 1756
1755 QYFPNPVKSIFDNFKRLNKEFSDFIRDK VTEHRKSIRPSSVRDMTDAFIVSLDKLSE 1585
1584 KTGVPLWKDYVIPTVGDVFG ASQDTLSTALQWIFLVLVR 1468 (2)
294 YPDMQQRLQEEVDLVVGRQRLPCIEDQQQLPWVMAFIYEVMRFTSFVPLTIPHSTTTDTT 115
114 IMGYTIPKNTIIFINQWSINHDPTIWSHPET 13
FDPNRFLNPSGSLNKDLTSRMLIFSMGKRRCIGEELSKLHLFLFTALIGHQCHITDDPA
KPTTMDYNYGLTLKPRGFYVALTLRGDMRLLDEAASRPPAEEPGRGPLADP*

>CYP1C1 Scaffold_3008b no introns complete gene
LGS269180.x1 Length = 510 38-163 = Scaffold_11497 48% to 1B1 no introns
10253 MALDTEFGVKSSSITREWSGQVQPALVASFLFLFCLEACLWVRNLRHKRRL
10100 PGPFAWPVVGNAMQLGQMPHITFAKLAKKYGNVYQIRLGCSNI 9972
9971  VVLNGDQAIHQALIEHSTEFAGRPNFVSFQMISGGRSLTFTNYSKQWKVHRKLAQSSLRA 9792
9791  FSSANKQTKIAFEQHVTAEANELVQAFLRYSTDGRYFDPAHEFTVAAANVMCALCFGKRY 9612
9611  GHDDHEFRCLLKKLNKFGETVGAGSLVDVMPWLQSFPNPVRSLYENFKSLNEEFFNFV 9438
9437  KNKVQEHRESFDPNVTRDMSDAMINVIEERKDGTLSKEFAEATITDLIGAGQDTVS 9270
9269  TVLQWIVLLLVKHPDKQAKLHELMDKVVGQDRLPTTEDRSSLAYLDAFIYETMRFTSFVP 9090
9089  VTIPHSTTSDVTIEGLRIPKDTVVFINQWSVNHDPLKWKDPHVFDPSRFLNENGDLNKDL 8910
8909  TSGVMIFSSGKRRCIGSQIAKVEVFLFAAILLHQCSFESDPSDPLTLDCSYGLTLKP 8739
      LRCFVSAKPRGKLLGLVSPA* 8676


>GCiWno101_g19.b1 CHROMAT_FILE: GCiWno101_g19.b1 PHD_FILE: GCiWno101_g19.b1.phd.1
           CHEM: term DYE: big TIME: Wed Sep  5 06:47:37 2001
           TEMPLATE: GCiWno101_g19 DIRECTION: fwd
          Length = 932

 Score = 62.8 bits (150), Expect = 6e-10
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -1

Query: 34  EFQKLLSMNTEFGAVIELGPIIDAMPWIK 62
           EFQKLLSMNTEFGAVIELGPIIDAMPWIK
Sbjct: 752 EFQKLLSMNTEFGAVIELGPIIDAMPWIK 666

>GCiWno549_a17.g1 CHROMAT_FILE: GCiWno549_a17.g1 PHD_FILE: GCiWno549_a17.g1.phd.1
          CHEM: term DYE: big TIME: Mon Oct 22 10:59:33 2001
          TEMPLATE: GCiWno549_a17 DIRECTION: rev
          Length = 927

 Score = 62.8 bits (150), Expect = 8e-10
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +3

Query: 1  EFQKLLSMNTEFGAVIELGPIIDAMPWIK 29
          EFQKLLSMNTEFGAVIELGPIIDAMPWIK
Sbjct: 12 EFQKLLSMNTEFGAVIELGPIIDAMPWIK 98

>GCiWno549_a17.g1_1
YFSRNSKSY*V*TQNLAPL*NWDR*LMQCRGSR*KLIYNNCFNPGNRYVLPNCQANLK*K
LQN**NTHPSQSYTYVVLVSEHEMHETEQPCYNDPSRDDK*LKFTCI*FLILYYAKALCF
SQSTVE*NLFILS*RRHNSI*NTGVLFPPRII*LCG*LDA*QQNRVV*TSSNWCQQHSFF
TRNVFDLTCPDHVSRVQHIAAKHHKQEVFSVSQTLRMFYILEIL*KPAFVIPTCQICLLK
RNA*VNHELTCVTERXNKYQI**GGGKI*HXFLFSFTAL*XVVNKEYSKLLNRILTTSIA
RC*LFKTGS
>GCiWno549_a17.g1_2
IFPGIPKAIEYEHRIWRRYRTGTDN*CNAVDQGKN*YITIVLIQGTVTCCQIVKQI*NEN
YKTNKTLIHHKAIRTWYW*ASTRCMKQNNRVITTHPAMINN*NSHVFNS*YFIMPRPCVF
PSQRLNEIYLFSHSGATTVFKTRVFCFHRVLFDFVDN*MRNSRTGWFEPVLTGVSNIRSS
HAMSLI*LAQITCLGFNISLRNTTNKKFSRYRKLLECFTFWRYYKSLRL*SLPVRYAC*S
ETHKSTMS*HVSQNVXINTKYSRVGERYDMXFFSLLPPYXW**TKSIQNY*TVSLRLPSX
VVNCLKQD
>GCiWno549_a17.g1_3
FFQEFQKLLSMNTEFGAVIELGPIIDAMPWIKVKTNI*QLF*SREPLRVAKLSSKFKMKI
TKLIKHSSITKLYVRGTGKRARDA*NRTTVL*RPIPR**ITKIHMYLILNTLLCQGLVFF
PVNG*MKFIYSLIAAPQQYLKHGCSVSTAYYLTLWIIRCVTAEPGGLNQF*LVSATFVLH
TQCL*SNLPRSRV*GSTYRCETPQTRSFLGIANS*NVLHSGDIIKACVCNPYLSDMLAKA
KRISQP*VNMCHRTSK*IPNIVGWGKDMTXFSFLFYRPIXGSKQRVFKIIKPYPYDFHRX
LLIV*NRI

>GCiWno755_d15.g1_1
SSSDPCVKENQSGRNXVLTGCQQXFVLHTQCL*SNLPRSRV*GSTYRCKTPQTRSLLGIA
NS*NVLHSGDVIKACVCNPYLSDMLAIVY*RVNA*VNHELTCVTERQNKYQI**GGERYD
MFSFSFTAL*LVVNKEYSKIINRILTTSIGRC*LFKTRSGYLDIMC*RCPIPPTLLYIFT
LKEILWQLFVT*S*RSNVSLISKKNLFQHLPGTYRKRKCINFFL*VIPKFKKAIADYLKI
TCNWTLGQDISNMDGKSTKNKL*KTYNGH**YKCLKVFYMDGRFYYFFSCQT*SRLTGCL
S
>GCiWno755_d15.g1_2
RARTHA*KRTRAGGTQF*LGVSXHSFFTRNVFDLTCPDRVSRVQHIAAKHHKQEVCSVSQ
TLRMFYILEML*KPAFVIPTCQICLRLFIEG*THKSTMS*HVSQNVKINTKYSRVGKDMT
CFLSLLPPYSW**TKSIQKL*TVSLRLPSAVVNCLKQDQDIWILCARGVPSPPPYFIFSR
*KRSYGNYLLHDLKGLTFR*FRRKIYFNTYLALTEKENV*TFFCKSFRNSRKPLPII*KS
LATGHLVKT*VIWTAKVRKTNYKRLITDTDSINV*KFFIWMEDFTIFFPAKHEVV*PVVC
>GCiWno755_d15.g1_3
ELGPMRKREPEREEXSSNWVSAXIRSSHAMSLI*LAQIACLGFNISLQNTTNKKFARYRK
LLECFTFWRCYKSLRL*SLPVRYACDCLLKGKRISQP*VNMCHRTSK*IPNIVGWGKI*H
VFFLFYRPIVGSKQRVFKNYKPYPYDFHRPLLIV*NKIRIFGYYVLEVSHPPHPTLYFHV
KRDLMAIICYMILKV*RFVNFEEKSISTLTWHLQKKKMYKLFFVSHSEIQESHCRLFENH
LQLDTWSRHK*YGRQKYEKQTIKDL*RTLIV*MFESFLYGWKILLFFFLPNMKSFNRLFV

>GCiWno564_h05.g1_1
NVKIIQYSGVGKIYMFSFSFTAL*LVVTRVSKYKPYPYDFHRPLLIV*NKIRIFGYYVLE
VSHPPHPTLYFHVKRDLMAIICYMILKV*RFVNFEEKSISTLTWHLQKKKMYKLFFVGHS
EIQESHCRLFENQLATGHLVKT*VNMDGKSYEKRNYNRLIT*HMIV*MFGKLFYNE*KNL
TYLFSRGRAMTVVITRLFCFIHLVPAFTSYHVYNFFADRRHYHLEKLLLRI*CNNLL*ES
MGVLXTFDNDDVTNVVASMTSEVLEKSQREKSRK*PXARQXRLLLFHRNTWGGXAXXVQT
XFDTI*X
>GCiWno564_h05.g1_2
T*K*SNIVGWERYTCFLSLLPPYSW**QEFQNINRILTTSIGRC*LFKTRSGYLDIMC*R
CPIPPTLLYIFTLKEILWQLFVT*S*RSNVSLISKKNLFQHLPGTYRKRKCINFFL*VIP
KFKKAIADYLKINLQLDTWSRHR*IWTAKVTKNETIIDLLRDT**YKCLESYFIMNERI*
LIYFHVAEQ*QSL*HGCSVSYTLCLLLRVTTYITFLLIADITI*KSYYCAYNAIIYFKSR
WGFLXHSTMMTSQM**LR*RQKCSRKVSGRNQGNNRXRDXNDCCSFTEILGAG*LXXYKL
XSIQFE
>GCiWno564_h05.g1_3
RKNNPI*WGGKDIHVFFLFYRPIVGSNKSFKI*TVSLRLPSAVVNCLKQDQDIWILCARG
VPSPPPYFIFSR*KRSYGNYLLHDLKGLTFR*FRRKIYFNTYLALTEKENV*TFFCRSFR
NSRKPLPII*KSTCNWTLGQDIGKYGRQKLRKTKL**TYYVTHDSINVWKVIL**MKEFN
LFIFTWQSNDSRYNTVVLFHTPCACFYELPRI*LFC*SPTLPFRKVTIAHIMQ*FTLRVD
GGSXNIRQ**RHKCSSFDDVRSAREKSAGEIKEITXSETXTIAALSQKYLGRXSXXCTNL
XRYNL

>GCiWno564_h05.g1
AACGTAAAAATAATCCAATATAGTGGGGTGGGAAAGATATACATGTTTTCTTTCTCTTTTACCGCCCTATAGTTGGTAGT
AACAAGAGTTTCAAAATATAAACCGTATCCTTACGACTTCCATCGGCCGTTGTTAATTGTTTAAAACAAGATCAGGATAT
TTGGATATTATGTGCTAGAGGTGTCCCATCCCCCCCACCCTACTTTATATTTTCACGTTAAAAGAGATCTTATGGCAATT
ATTTGTTACATGATCTTAAAGGTCTAACGTTTCGTTAATTTCGAAGAAAAATCTATTTCAACACTTACCTGGCACTTACA
GAAAAAGAAAATGTATAAACTTTTTTTTGTAGGTCATTCCGAAATTCAAGAAAGCCATTGCCGATTATTTGAAAATCAAC
TTGCAACTGGACACTTGGTCAAGACATAGGTAAATATGGACGGCAAAAGTTACGAAAAACGAAACTATAATAGACTTATT
ACGTGACACATGATAGTATAAATGTTTGGAAAGTTATTTTATAATGAATGAAAGAATTTAACTTATTTATTTTCACGTGG
CAGAGCAATGACAGTCGTTATAACACGGTTGTTCTGTTTCATACACCTTGTGCCTGCTTTTACGAGTTACCACGTATATA
ACTTTTTTGCTGATCGCCGACATTACCATTTAGAAAAGTTACTATTGCGCATATAATGCAATAATTTACTTTAAGAGTCG
ATGGGGGTTCTTANAACATTCGACAATGATGACGTCACAAATGTAGTAGCTTCGATGACGTCAGAAGTGCTCGAGAAAAG
TCAGCGGGAGAAATCAAGGAAATAACCGANAGCGAGACAANAACGATTGCTGCTCTTTCACAGAAATACTTGGGGCGGGN
TAGCTGNTGNTGTACAAACTTGNTTCGATACAATTTGAA

>GCiWno624_m24.g1_1 this seq has the next P450 exon
TWFRHR*IWTAKVTKNETIIDLLRDT**YKCLESYFIMNERI*LIYFHVAEQ*QSL*HGC
SVSYTLCLLLRVTTYITFLLIADITI*KSYYCAYNAIIYFKSRWGS*NIRQ**RHKCSSF
DDVRGAREKVSGRIKGNNRKRDKNDCCSFSRYTWGG*AVVGTNFVSITILNE*MNECNLL
ILTWIQRQSL*HRCIKW*L*KLFTKKVIYRLGNS*AGCV*NRIPVLITVLAPPREDK*LN
SFIHGSHSRIRTHLASEYRAESETXPAGRQIR*QNDKRLTKAVILKAQSLISKRQ*TYLL
INKSPTLPVX
>GCiWno624_m24.g1_2
LGSDIGKYGRQKLRKTKL**TYYVTHDSINVWKVIL**MKEFNLFIFTWQSNDSRYNTVV
LFHTPCACFYELPRI*LFC*SPTLPFRKVTIAHIMQ*FTLRVDGVLKTFDNDDVTNVVAS
MTSEVLEKKSAGESREITESETKTIAALSADILGAGRLLLVQTLFRLQF*MNE*MNVTCL
S*RGFNDSRYNTGV*NGSSKNYSPKRLYIDLVTRKPDVYETEYPC**LSLPPHVRINS*I
HSSMVATVGFELTSPPNTALSPKRXQQADKYGDKTINVLPKQ*S*RHKV*SPSDNKRTY*
STRARRFPFX
>GCiWno624_m24.g1_3
LVQT*VNMDGKSYEKRNYNRLIT*HMIV*MFGKLFYNE*KNLTYLFSRGRAMTVVITRLF
CFIHLVPAFTSYHVYNFFADRRHYHLEKLLLRI*CNNLL*ESMGFLKHSTMMTSQM**LR
*RQRCSRKSQRENQGK*PKARQKRLLLFQQIYLGRVGCCWYKLCFDYNFE*MNE*M*LAY
PDVDSTTVVITPVYKMVALKIIHQKGYI*TW*LVSRMCMKQNTRVNNCPCPPT*G*IVKF
IHPW*PQ*DSNSPRLRIPR*VRNXTSRQTNTVTKR*TSYQSSNPKGTKFNLQATINVPTD
QQEPDASRF

>LQW222340.x1_4
VTPVRYGNGGRGRNGGRWVVGTAVDTVERYW*P*GWILAKVNVRVI**YCGGNMGQGCNL
LLHGRGRDGGTVCGTAI**AGHGIRDEGGMCVIILRALYSGSALVRWTLCVEVRCPC*SG
PGHKDKEVNCRLVYAFEVRA*VTKRKLIIELVYEMGPHFIVFARPILGKNKEYSEN*SCA
CF*IALFSRNSKSY*V*TQNLAPL*NWDR*LMQCRGSR*KLIYNNCFNPGNRYVLPNCQA
NLNMNNYKTNKTLIHKAIRTW*GSSRATKPHAAALP
>LQW222340.x1_5
HSGEVWEWR*GT*WGPVGGGDGCGYG*EVLVAVRLDFS*SERKGYIIVLWG*YGPRM*FA
LARKGTRRGNGMWNGDLMSWTWNSR*GGDVRDYIKSVVQR*CTCEVDIVRRSALPMLKWA
WP*G*RS*LPVSLCI*SACLGHEAKVNYRVGV*NGSTFHCICSSYFGKKQRIFRELIMCL
FLNSSIFQEFQKLLSMNTEFGAVIELGPIIDAMPWIKVKTNI*QLF*SREPLRVAKLSSK
FKYE*LQN**NTHPQSYTYVVGIL*SD*TACSCTAX
>LQW222340.x1_6
SLR*GMGMAVGDVMGAGGWWGRLWIRLRGIGSRKAGF*LK*T*GLYNSTVGVIWAKDVIC
SCTEGDATGERYVERRFDELDMEFAMRGGCA*LY*ERCTAVVHL*GGHCA*KCAAHVEVG
LAIRIKKLIAG*FMHLKCVPRSRSES*L*SWCMKWVHISLYLLVLFWEKTKNIQRINHVL
VFK*LYFPGIPKAIKYEHRIWRRYRTGTDN*CNAVDQGKN*YITIVLIQGTVTCCQIVKQ
I*I*IITKLIKHSSTKLYVRGRDPLERLNRMQLHCR

>GCiWno101_g19.b1_4
SLFPFSYPFKSSXSRSES*L*VDI*NGPHFILFLVLFGKKTKNIQRINHVLVXK*FYFPG
IPKAIEYEHRIWRRYRTGTDN*CNAVDQGKN*YIPIVLIQGTVTCCQIVKQI*NENYKTN
IKLIHKAIRTWYW*ASTRCMKQNNRVITTHPAMINN*NSHVFNS*YFIMPRPCVFPSQRL
NEIYLFSHSGATTVFKTRVFCFHRVFAYALFDFVDN*MRKSRTRAGGTSSNWCQQHSFFT
RNVFDLTCPDRVSRVQHIAAKHHKQEVCSVSQTLRMFYILEML*KPALLIHACQI*P*SC
RRFPANSYIH
>GCiWno101_g19.b1_5
KFISV*LSI*VVLXTKRKLIIS*YIKWSTFHSISRPIWEKNKEYSEN*SCAGFXIVLFPR
NSKSY*V*TQNLAPL*NWDR*LMQCRGSR*KLIYTNCFNPGNRYVLPNCQANLK*KLQN*
YKTHPQSYTYVVLVSEHEMHETEQPCYNDPSRDDK*LKFTCI*FLILYYAKALCFSQSTV
E*NLFILS*RRHNSI*NTGVLFPPRIRLRVI*LCG*LDA*KQNQSGRNQF*LVSATFVLH
TQCL*SNLPRSRV*GSTYRCKTPQTRSLLGIANS*NVLHSGDVIKACVVDPCMSDMTMIV
PSFSGKQLYPX
>GCiWno101_g19.b1_6
KVYFRLVIHLSRPXHEAKVNYKLIYKMVHISFYFSSYLGKKQRIFRELIMCWFXNSSISQ
EFQKLLSMNTEFGAVIELGPIIDAMPWIK VKTNIYQLF*SREPLRVAKLSSKFKMKITKL
I*NSSTKLYVRGTGKRARDA*NRTTVL*RPIPR**ITKIHMYLILNTLLCQGLVFFPVNG
*MKFIYSLIAAPQQYLKHGCSVSTAYSPTRYLTLWIIRCVKAEPEREEPVLTGVSNIRSS
HAMSLI*LAQIACLGFNISLQNTTNKKFARYRKLLECFTFWRCYKSLRC*SMHVRYDHDR
AVVFRQTAIST

>GCiWno101_g19.b1
GTGGATATAGCTGTTTGCCGGAAAACGACGGCACGATCATGGTCATATCTGACATGCATGGATCAACAACGCAGGCTTTT
ATAACATCTCCAGAATGTAAAACATTCTAAGAGTTTGCGATACCGAGCAAACTTCTTGTTTGTGGTGTTTTGCAGCGATA
TGTTGAACCCTAGACACGCGATCTGGGCAAGTTAGATCAAAGACATTGCGTGTGAAGAACGAATGTTGCTGACACCAGTT
AGAACTGGTTCCTCCCGCTCTGGTTCTGCTTTTACGCATCTAATTATCCACAAAGTCAAATAACGCGTAGGCGAATACGC
GGTGGAAACAGAACACCCGTGTTTTAAATACTGTTGTGGCGCCGCTATGAGAGAATAAATAAATTTCATTCAACCGTTGA
CTGGGAAAAACACAAGGCCTTGGCATAATAAAGTATTAAGAATTAAATACATGTGAATTTTAGTTATTTATCATCGCGGG
ATGGGTCGTTATAACACGGTTGTTCTGTTTCATGCATCTCGTGCTCGCTTACCAGTACCACGTACGTATAGCTTTGTGGA
TGAGTTTTATATTAGTTTTGTAATTTTCATTTTAAATTTGCTTGACAATTTGGCAACACGTAACGGTTCCCTGGATTAAA
ACAATTGGTATATATTAGTTTTTACCTTGATCCACGGCATTGCATCAATTATCGGTCCCAGTTCTATAACGGCGCCAAAT
TCTGTGTTCATACTCAATAGCTTTTGGAATTCCTGGGAAATAGAACTATTTNAAAACCAGCACATGATTAATTCTCTGAA
TATTCTTTGTTTTTTTCCCAAATAGGACGAGAAATAGAATGAAATGTGGACCATTTTATATATCAACTTATAATTAACTT
TCGCTTCGTGANCAGGACGACTTAAATGGATAACTAAACGGAAATAAACTTT

>GCiWno755_d15.g1_1
SSSDPCVKENQSGRNXVLTGCQQXFVLHTQCL*SNLPRSRV*GSTYRCKTPQTRSLLGIA
NS*NVLHSGDVIKACVCNPYLSDMLAIVY*RVNA*VNHELTCVTERQNKYQI**GGERYD
MFSFSFTAL*LVVNKEYSKIINRILTTSIGRC*LFKTRSGYLDIMC*RCPIPPTLLYIFT
LKEILWQLFVT*S*RSNVSLISKKNLFQHLPGTYRKRKCINFFL*VIPKFKKAIADYLKI
TCNWTLGQDISNMDGKSTKNKL*KTYNGH**YKCLKVFYMDGRFYYFFSCQT*SRLTGCL
S
>GCiWno755_d15.g1_2
RARTHA*KRTRAGGTQF*LGVSXHSFFTRNVFDLTCPDRVSRVQHIAAKHHKQEVCSVSQ
TLRMFYILEML*KPAFVIPTCQICLRLFIEG*THKSTMS*HVSQNVKINTKYSRVGKDMT
CFLSLLPPYSW**TKSIQKL*TVSLRLPSAVVNCLKQDQDIWILCARGVPSPPPYFIFSR
*KRSYGNYLLHDLKGLTFR*FRRKIYFNTYLALTEKENV*TFFCKSFRNSRKPLPII*KS
LATGHLVKT*VIWTAKVRKTNYKRLITDTDSINV*KFFIWMEDFTIFFPAKHEVV*PVVC
>GCiWno755_d15.g1_3
ELGPMRKREPEREEXSSNWVSAXIRSSHAMSLI*LAQIACLGFNISLQNTTNKKFARYRK
LLECFTFWRCYKSLRL*SLPVRYACDCLLKGKRISQP*VNMCHRTSK*IPNIVGWGKI*H
VFFLFYRPIVGSKQRVFKNYKPYPYDFHRPLLIV*NKIRIFGYYVLEVSHPPHPTLYFHV
KRDLMAIICYMILKV*RFVNFEEKSISTLTWHLQKKKMYKLFFVSHSEIQESHCRLFENH
LQLDTWSRHK*YGRQKYEKQTIKDL*RTLIV*MFESFLYGWKILLFFFLPNMKSFNRLFV

Opposite end of this clone = seq 67 join together for now
>GCiWno755_d15.b1_4
KKLRIFFILCRNMVSXCHCHQPESLGC*TTINSFP*MMLPIFL*RSGAKTVVFKHRWYVS
YMP*RFTSYHTYMVVEIF*KYFCKDFKFLFLRRFGGFRRLYPALYHILR*KTSN*QATPL
REALWLSLVNTL*TTTRKIGKIRKILTQSDF*RKTKAVKLSSTKVYQKRFSHFRLGSVNV
PEVNCHECYYFWPLHCWFKSVIYLPISSAHRRRRRSMV*FYDQNTYP*N*H*ESTGNVVT
QFAHNTAFFTSVPTFDALKILYDFVKIHK*KNEKRYTKHHRSLYER*LTYMQVLLP*SAI
I*
>GCiWno755_d15.b1_5
KIKDFFYFVQEHG*XLPLPPT*KFGLLNDH*FISMNDVTYFSIA*RGKDSGI*AQVVCFI
HAVTLYKLPHIYGSRDFLKIFL*RF*ISIST*VWRFSSPLSSTIPHSTLKDVKLAGHTIK
RGTMVIISQYAVNHDPQNWKNPENFDPERFLTKNEGGEIIFNESLSEKVLAFSIGERKCP
GSQLSRMLLFLATTLLVQVSDLSADLERPPTAAAEYGLILRPKHLSIKLTLREHWQRRDS
IRA*HSIFYKCTNI*CTENLIRFCENTQMKK*KKVHKTPQITL*TLTYLYASIITIECNY
IX
>GCiWno755_d15.b1_6
KN*GFFLFCAGTWLVXAIATNLKVWVVKRPLIHFHE*CYLFFYSVAGQRQWYLSTGGMFH
TCRDALQVTTHIW**RFFKNIFVKILNFYFYVGLAVFVAFIQHYTTFYVKRRQTSRPHH*
ERHYGYH*SIRCKPRPAKLEKSGKF*PRAISNEKRRR*NYLQRKFIRKGSRIFDWGA*MS
RKSIVTNVTIFGHYTAGSSQ*FICRSRAPTDGGGGVWFNFTTKTLIHKIDTKRALATS*L
NSRITQHFLQVYQHLMH*KSYTIL*KYTNEKMKKGTQNTTDHFMNVNLPICKYYYHRVQL
YX


>GCiWno564_h05.g1 CHROMAT_FILE: GCiWno564_h05.g1 PHD_FILE: GCiWno564_h05.g1.phd.1
           CHEM: term DYE: big TIME: Wed Oct 24 10:40:01 2001
           TEMPLATE: GCiWno564_h05 DIRECTION: rev
          Length = 919

 Score =  118 bits (293), Expect = 3e-26
 Identities = 58/61 (95%), Positives = 58/61 (95%), Gaps = 1/61 (1%)
 Frame = +1

Query: 1   KRDLMAIICYMILKV-RFVNFEEKSISTLTWHLQKKKMYKLFFVSHSEIQESHCRLFENH 59
           KRDLMAIICYMILKV RFVNFEEKSISTLTWHLQKKKMYKLFFV HSEIQESHCRLFEN 
Sbjct: 220 KRDLMAIICYMILKV*RFVNFEEKSISTLTWHLQKKKMYKLFFVGHSEIQESHCRLFENQ 399

Query: 60  L 60
           L
Sbjct: 400 L 402

>GCiWno564_h05.g1_1
NVKIIQYSGVGKIYMFSFSFTAL*LVVTRVSKYKPYPYDFHRPLLIV*NKIRIFGYYVLE
VSHPPHPTLYFHVKRDLMAIICYMILKV*RFVNFEEKSISTLTWHLQKKKMYKLFFVGHS
EIQESHCRLFENQLATGHLVKT*VNMDGKSYEKRNYNRLIT*HMIV*MFGKLFYNE*KNL
TYLFSRGRAMTVVITRLFCFIHLVPAFTSYHVYNFFADRRHYHLEKLLLRI*CNNLL*ES
MGVLXTFDNDDVTNVVASMTSEVLEKSQREKSRK*PXARQXRLLLFHRNTWGGXAXXVQT
XFDTI*X
>GCiWno564_h05.g1_2
T*K*SNIVGWERYTCFLSLLPPYSW**QEFQNINRILTTSIGRC*LFKTRSGYLDIMC*R
CPIPPTLLYIFTLKEILWQLFVT*S*RSNVSLISKKNLFQHLPGTYRKRKCINFFL*VIP
KFKKAIADYLKINLQLDTWSRHR*IWTAKVTKNETIIDLLRDT**YKCLESYFIMNERI*
LIYFHVAEQ*QSL*HGCSVSYTLCLLLRVTTYITFLLIADITI*KSYYCAYNAIIYFKSR
WGFLXHSTMMTSQM**LR*RQKCSRKVSGRNQGNNRXRDXNDCCSFTEILGAG*LXXYKL
XSIQFE
>GCiWno564_h05.g1_3
RKNNPI*WGGKDIHVFFLFYRPIVGSNKSFKI*TVSLRLPSAVVNCLKQDQDIWILCARG
VPSPPPYFIFSR*KRSYGNYLLHDLKGLTFR*FRRKIYFNTYLALTEKENV*TFFCRSFR
NSRKPLPII*KSTCNWTLGQDIGKYGRQKLRKTKL**TYYVTHDSINVWKVIL**MKEFN
LFIFTWQSNDSRYNTVVLFHTPCACFYELPRI*LFC*SPTLPFRKVTIAHIMQ*FTLRVD
GGSXNIRQ**RHKCSSFDDVRSAREKSAGEIKEITXSETXTIAALSQKYLGRXSXXCTNL
XRYNL



>GCiWno624_m24.g1 CHROMAT_FILE: GCiWno624_m24.g1 PHD_FILE: GCiWno624_m24.g1.phd.1
           CHEM: term DYE: big TIME: Mon Oct 29 11:17:19 2001
           TEMPLATE: GCiWno624_m24 DIRECTION: rev
          Length = 929

 Score =  120 bits (299), Expect(2) = 1e-36
 Identities = 61/64 (95%), Positives = 61/64 (95%), Gaps = 2/64 (3%)
 Frame = +3

Query: 1   TYLFSRGRAMTVVITRLFCFIHLVPAFTSYHVYNFFADRRHYHLEKLLLRI-CNNLL-ES 58
           TYLFSRGRAMTVVITRLFCFIHLVPAFTSYHVYNFFADRRHYHLEKLLLRI CNNLL ES
Sbjct: 129 TYLFSRGRAMTVVITRLFCFIHLVPAFTSYHVYNFFADRRHYHLEKLLLRI*CNNLL*ES 308

Query: 59  MGVL 62
           MG L
Sbjct: 309 MGFL 320


 Score = 52.7 bits (124), Expect(2) = 1e-36
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +2

Query: 60  GVLXTFDNDDVTNVVASMTSEVLEKSQREKSRK 92
           GVL TFDNDDVTNVVASMTSEVLEK    +SR+
Sbjct: 311 GVLKTFDNDDVTNVVASMTSEVLEKKSAGESRE 409

>GCiWno624_m24.g1_1
TWFRHR*IWTAKVTKNETIIDLLRDT**YKCLESYFIMNERI*LIYFHVAEQ*QSL*HGC
SVSYTLCLLLRVTTYITFLLIADITI*KSYYCAYNAIIYFKSRWGS*NIRQ**RHKCSSF
DDVRGAREKVSGRIKGNNRKRDKNDCCSFSRYTWGG*AVVGTNFVSITILNE*MNECNLL
ILTWIQRQSL*HRCIKW*L*KLFTKKVIYRLGNS*AGCV*NRIPVLITVLAPPREDK*LN
SFIHGSHSRIRTHLASEYRAESETXPAGRQIR*QNDKRLTKAVILKAQSLISKRQ*TYLL
INKSPTLPVX
>GCiWno624_m24.g1_2
LGSDIGKYGRQKLRKTKL**TYYVTHDSINVWKVIL**MKEFNLFIFTWQSNDSRYNTVV
LFHTPCACFYELPRI*LFC*SPTLPFRKVTIAHIMQ*FTL RVDGVLKTFDNDDVTNVVAS
MTSEVLEKKSAGESREITESETKTIAALSADILGAGRLLLVQTLFRLQF *MNE*MNVTCL
S*RGFNDSRYNTGV*NGSSKNYSPKRLYIDLVTRKPDVYETEYPC**LSLPPHVRINS*I
HSSMVATVGFELTSPPNTALSPKRXQQADKYGDKTINVLPKQ*S*RHKV*SPSDNKRTY*
STRARRFPFX
>GCiWno624_m24.g1_3
LVQT*VNMDGKSYEKRNYNRLIT*HMIV*MFGKLFYNE*KNLTYLFSRGRAMTVVITRLF
CFIHLVPAFTSYHVYNFFADRRHYHLEKLLLRI*CNNLL*ESMGFLKHSTMMTSQM**LR
*RQRCSRKSQRENQGK*PKARQKRLLLFQQIYLGRVGCCWYKLCFDYNFE*MNE*M*LAY
PDVDSTTVVITPVYKMVALKIIHQKGYI*TW*LVSRMCMKQNTRVNNCPCPPT*G*IVKF
IHPW*PQ*DSNSPRLRIPR*VRNXTSRQTNTVTKR*TSYQSSNPKGTKFNLQATINVPTD
QQEPDASRF

>scf/ciona01/G126/seq_dir/hrs/G126P64527F.T0/G126P64527FE7.T0.seq    714      0
            714  ABI
            Length = 714

  Plus Strand HSPs:

 Score = 105 (37.0 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 25/51 (49%), Positives = 31/51 (60%), Frame = +3

Query:    17 ELGPIIDAMPWIKFTLRVDGVLKTFDNDDVTNVVASMTSEVLEKKSAGESR 67
             ++ P  D    + F  RV  +LK FD DDV+NVV+SMTSEVLE K     R
Sbjct:   561 KINPRFDHNIILHF-FRVREILKNFDKDDVSNVVSSMTSEVLESKEDDSKR 710

GCiWno874_c22.b1 CHROMAT_FILE: GCiWno874_c22.b1 PHD_FILE: GCiWno874_c22.b1.phd.1
           CHEM: term DYE: big TIME: Mon Dec 10 12:35:27 2001
           TEMPLATE: GCiWno874_c22 DIRECTION: fwd
          Length = 880

 Score = 92.4 bits (226), Expect = 7e-19
 Identities = 53/66 (80%), Positives = 54/66 (81%), Gaps = 4/66 (6%)
 Frame = +2

Query: 1   IHPWPQ--DSNSPRLRIPR-VRNXTSRQTNTVTKR-TSYQSSNPKGTKFNLQATINVPTD 56
           IHPW Q  DSNSPRLRIPR VRN TSRQTNT  KR TS QSSN K TKFNLQATINVPTD
Sbjct: 44  IHPW*QQ*DSNSPRLRIPR*VRNETSRQTNT*QKR*TSNQSSNLKATKFNLQATINVPTD 223

Query: 57  QQEPDA 62
           QQ+P A
Sbjct: 224 QQKPHA 241

>GCiWno874_c22.b1_1
NCPCPPTLRINS*IHSSMVATVGFELTSPPNTALSPKRNQQADKYVTKTINV*PKQ*SKS
HKV*SPSDNKRTY*STEAARSRLNFHFPKKLAIYG*LPVLLVNKFVL*SYATKSRLR*CV
YSNSAFWFRFTEFSMITAFRFNLVCLLKCKVRKLRCLLSFANKFLTFYYYKS*SVFFYIY
FYSRPTHNFYNFFLGHKFTPMFSKSPQ*THGRSPEQTRKQTSNLGGSKLPILRGRGTDRG
RKLNDCIYFRCRHMCYCLPXAPAWEVWVXNTTIYFIYHDCMLLIFLIA*RGQDX
>GCiWno874_c22.b1_2
TVLAPQR*G*IVKFIHPW*QQ*DSNSPRLRIPR*VRNETSRQTNT*QKR*TSNQSSNLKA
TKFNLQATINVPTDQQKPHAHV*ISIFQKN*QSTVNCLFCL*TSLCYKVMLPKADCGDVY
ILILHFGSDLLSFQ**QRLDLILSAY*NAKYENSGVYYPLLISFLHSIIINLNLCFFIFI
FIPGQHTTSTTFFWVINLLLCFPKVLNKLTEEVRSKLGNRLPTLEDRNSLSYVDAVLTEV
EN*TIVFTFVADTCVTACHXHQPGRYGXVTRPFTSFTMTACYLFFL*RSGGKT
>GCiWno874_c22.b1_3
LSLPPNAEDK*LNSFIHGSNSRIRTHLASEYRAESETKPAGRQIRDKNDKRLTKAVI*KP
QSLISKRQ*TYLLINRSRTLTFKFPFSKKTSNLRLIACFACKQVCVIKLCYQKPTAVMCI
F*FCILVQIY*VFNDNSV*I*SCLLIKMQSTKTQVFTILC**VSYILLL*ILICVFLYLF
LFQANTQLLQLFSGS*IYSYVFQKSSINSRKKSGANSETDFQPWRIETPYLTWTRY*QR*
KIKRLYLLSLQTHVLLPAIXTSLGGMGX*HDHLLHLP*LHATYFSYSVAGAR


>GCiWno755_d15.g1 CHROMAT_FILE: GCiWno755_d15.g1 PHD_FILE: GCiWno755_d15.g1.phd.1
           CHEM: term DYE: big TIME: Mon Dec  3 10:31:34 2001
           TEMPLATE: GCiWno755_d15 DIRECTION: rev
          Length = 903

 Score =  100 bits (247), Expect = 3e-21
 Identities = 52/59 (88%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
 Frame = +3

Query: 1   HAMSLI-LAQIACLGFNISLQNTTNKKFARYRKLLECFTFWRCYKSLRC-SMHVRYDHD 57
           HAMSLI LAQIACLGFNISLQNTTNKKFARYRKLLECFTFWRCYKSLR  S+ VRY  D
Sbjct: 84  HAMSLI*LAQIACLGFNISLQNTTNKKFARYRKLLECFTFWRCYKSLRL*SLPVRYACD 260

LQW54206.x1 


>GCiWno620_b04.b1 CHROMAT_FILE: GCiWno620_b04.b1 PHD_FILE: GCiWno620_b04.b1.phd.1
          CHEM: term DYE: big TIME: Wed Oct 24 13:08:23 2001
          TEMPLATE: GCiWno620_b04 DIRECTION: fwd
          Length = 915

 Score =  121 bits (300), Expect = 1e-27
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = +2

Query: 9  VGNAPFLGAEPHKKLLELSLKYGPVYRLKMGGIKTVVLCNAEVVRSALIKQREAFSGRP 67
          VGNAPFLGAEPHKKLLELSLKYGPVYRLKMGGIKTVVLCNAEVVRSALIKQREAFSGRP
Sbjct: 2  VGNAPFLGAEPHKKLLELSLKYGPVYRLKMGGIKTVVLCNAEVVRSALIKQREAFSGRP 178

>GCiWno620_b04.b1_2
VGNAPFLGAEPHKKLLELSLKYGPVYRLKMGGIKTVVLCNAEVVRSALIKQREAFSGRPK
FSSYKAVSAGESVVFNDEETLPPWRSHKSKIVRHMHKYTTSIRTRDKVTDLINTECMMMV
TELDRISRSKCVNPENVIRMALANVMCAVCFGNRFEYDNEVFLALILYLAKVNVS*

>GCiWno497_m11.b1 CHROMAT_FILE: GCiWno497_m11.b1 PHD_FILE: GCiWno497_m11.b1.phd.1
           CHEM: term DYE: big TIME: Tue Oct 16 11:17:48 2001
           TEMPLATE: GCiWno497_m11 DIRECTION: fwd
          Length = 890

 Score =  141 bits (353), Expect = 9e-34
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +3

Query: 1   PGPIPWPLVGNAPFLGAEPHKKLLELSLKYGPVYRLKMGGIKTVVLCNAEVVRSALIKQR 60
           PGPIPWPLVGNAPFLGAEPHKKLLELSLKYGPVYRLKMGGIKTVVLCNAEVVRSALIKQR
Sbjct: 279 PGPIPWPLVGNAPFLGAEPHKKLLELSLKYGPVYRLKMGGIKTVVLCNAEVVRSALIKQR 458

Query: 61  EAFSGRP 67
           EAFSGRP
Sbjct: 459 EAFSGRP 479

>GCiWno768_a24.g1 CHROMAT_FILE: GCiWno768_a24.g1 PHD_FILE: GCiWno768_a24.g1.phd.1
           CHEM: term DYE: big TIME: Mon Dec  3 11:37:20 2001
           TEMPLATE: GCiWno768_a24 DIRECTION: rev
          Length = 930

 Score =  189 bits (476), Expect = 7e-48
 Identities = 91/92 (98%), Positives = 91/92 (98%)
 Frame = -1

Query: 2   PPWRSHKSKIVRHMHKYTTSIRTRDKVTDLINTECMMMVTELDRISRSKCVNPENVIRMA 61
           P WRSHKSKIVRHMHKYTTSIRTRDKVTDLINTECMMMVTELDRISRSKCVNPENVIRMA
Sbjct: 783 PLWRSHKSKIVRHMHKYTTSIRTRDKVTDLINTECMMMVTELDRISRSKCVNPENVIRMA 604

Query: 62  LANVMCAVCFGNRFEYDNEVFLALILYLAKVN 93
           LANVMCAVCFGNRFEYDNEVFLALILYLAKVN
Sbjct: 603 LANVMCAVCFGNRFEYDNEVFLALILYLAKVN 508

>GCiWno768_a24.g1_4
LKR*YFATQEL*DRH*LSKERLSGQAKFLFLQASFSCEKRSLQRRRNPYPLWRSHKSKIV
RHMHKYTTSIRTRDKVTDLINTECMMMVTELDRISRSKCVNPENVIRMALANVMCAVCFG
NRFEYDNEVFLALILYLAKVNVS*IYSTVG*YGPRCICSSRN*TTKTY*TRFIAYINSNK
FYIFIILKRCTAVVTFRLHFRRSRSHIKWPGYKIKKLISV*FII*VVLCHEAKVNYKLVY
KMVHISFYFSSYFGKKQRIFRELIMCLFLNSSIFQEFQKLLSMNTEFGAVIELGPIIDAM
PWIKVGYRAE
>GCiWno768_a24.g1_5
KTVVLCNAGVVRSPLIKQGEAFRXGQISLPTSQFQLRKA*SSTTKKPLPPLAFA*VKDSP
PHAQIHDFYSYSGQSHRSYKHRVYDDGH*TGSHI*IQMRQPRKCYTNGFSERNVRRVFWE
PL*IR*RGISSLNTVFSKS*RKLNI*YCGVIWAKVYLLFTKLNHKNVLNTIYSLHKFQ*V
LYLHYIKALYSGSHF*VTFS*KPLPY*VAWL*DKEVNFRLVYHLSRPMSRSES*L*VGV*
NGPHFILFLVLFWKKTKNIQRINHVLVFK*FYFPGIPKAIEYEHRIWRRYRTGTDN*CNA
VDQGRVPS*X
>GCiWno768_a24.g1_6
*NGSTLQRRSCKIATD*ARRGFQXRPNFSSYKPVSAAKSVVFNDEETLTPFGVRISQR*S
ATCTNTRLLFVLGTKSQIL*TQSV**WSLNWIAYLDPNASTQKMLYEWL*RT*CAPCVLG
TALNTITRYF*P*YCI*QKLT*VKYIVLWGNMGQGVFALHEIKPQKRIKHDL*LT*IPIS
FISSLY*SVVQR*SLLGYIFVEAAPILSGLAIR*RS*FPFSLSFKSSYVTKRKLIISWCI
KWSTFHSISRPILEKNKEYSEN*SCACF*IVLFSRNSKSY*V*TQNLAPL*NWDR*LMQC
RGSR*GTELX

>sequence 51, 219, 223 31% to 2J2
MYDVIIVCVISAIAVVAASWLKQNGSKKFPPGSRGLPFLGSVPFVLGSLERTLA
VWGWQNYGPVFFFTRGNTRTVVLNTYEAASEGFVKQGNH
LSGRFIDANHNELFADYSPQWQEQRKLRVKTLKGFGKVNTEEIMTSECKKMICRIRETKGSF
EAGYYLAVPTFNIVKSIIYGE
RFENKMNLIIYTFIFVAGEPSEGMNKQDEVNLSKVLADPVYKAGNGFMEFMAGMFPQIRS
SVAYERMLEKKGKERVRQVKE
KMTGSKKLIEGMLQNLQDWETGEVYNNQQLSCYLTDLFMAGTDTMATTVHWSLVFLAQNP
QVQEKMAAEVKSVAGNDVITTSMMDSMPYTRAVMHESSRLRPVFPLSLRHQATSDVTVKD
YVIPTGTSVVANLWAIQNDPKWWKQPSEFRPERHVTEDGGFTKSEKIVPFSVGPRYCLGS
QIAIYQQFIFLTNLVRGFRFRFDQAKVEPDLTGLMTSVLAPVNVHLVAEER*
LQW176098.y1 PERF TO HEME
LQW141848.y1 
LQW173645.y1 KYG TO MID
GCiWno24_f15.g1
GCiWno25_f15.g1
GCiWno733_a17.b1
GCiWno733_a17.g1
cigd048i16
cibd062g13
rcibd062g13
rcigd048i16
GCiWno542_i05.g1
GCiWno667_e24.g1

>GCiWno542_i05.g1
TTCGAGCTCGGTACCCTTCCCTTGCTATCGTTGGCTCGCAACGCGACAATAAACAAGTTACGCGTTTATTGATCTATTCA
TTATTTTACACCCTGTACACTTACATTACAGGGAGGCGCTTTTTGTTAATAAATAAATAAAATGCTTATTTTTTTGTTTC
AGATTGATTTGCTAGAATTTGTTTTGTCATAATTAATCATGTATGACGTCATAATAGTTTGCGTCATATCCGCAATAGCT
GTTGTCGCAGCAAGCTGGCTGAAACAAAATGGGTCAAAGAAGTTTCCCCCGGGGTCAAGGGGGTTACCCTTTCTCGGGAG
TGTACCCTTCGTTCTGGGTAGCCTAGAGCGCACCCTAGCGGTTTGGGGGTGGCAAAACTACGGCCCCGTTTTCTTCTTTA
CTCGGGGGAATACCCGCACAGTCGTGCTCAACACTTACGAAGCTGCAAGCGAAGGGTTCGTGAAACAGGGGAACCACCTG
TCGGGGAGATTCATCGACGCCAACCACAACGAACTGTTCGCGGATTATTCTCCACAGTGGCAGGAACAGCGGAAACTTCG
CGTTAAAACGCTCAAAGGGTTCGGGAAAGTGAATACAGAAGAGATTATGACGTCAGAATGCAAGAAAATGATTTGTAGAA
TACGGGAAACAAAGGGATCGTTCGAGGCGGGTTACTATCTCGCTGTACCAACGTTTAATATCGTAAAGAGCATTATTTAC
GGTGAGTGGNGATTTCGTATTATATTGATATATCTTTGGCTTTCCCACTAATGTAGTGTAATATATGTGATTTGGGTGGT
AGACCGCCCCACACGTATCAAAGGGATATCCGTTTCGATGCACGACACTACTACACGCGTGNTACAAATAGCATAAATAG
ATGCGTTACGCGAGAATANATAGGTCTCATTCATTCGCTTTGAGATAAGATGAAATTGGATATTATACGTTTT

>GCiWno542_i05.g1_1
FELGTLPLLSLARNATINKLRVY*SIHYFTPCTLTLQGGAFC**INKMLIFLFQIDLLEF
VLS*LIMYDVIIVCVISAIAVVAASWLKQNGSKKFPPGSRGLPFLGSVPFVLGSLERTLA
VWGWQNYGPVFFFTRGNTRTVVLNTYEAASEGFVKQGNHLSGRFIDANHNELFADYSPQW
QEQRKLRVKTLKGFGKVNTEEIMTSECKKMICRIRETKGSFEAGYYLAVPTFNIVKSIIY
GEWXFRIILIYLWLSH*CSVIYVIWVVDRPTRIKGISVSMHDTTTRVXQIA*IDALRENX
*VSFIRFEIR*NWILYVX
>GCiWno542_i05.g1_2
SSSVPFPCYRWLATRQ*TSYAFIDLFIILHPVHLHYREALFVNK*IKCLFFCFRLIC*NL
FCHN*SCMTS**FASYPQ*LLSQQAG*NKMGQRSFPRGQGGYPFSGVYPSFWVA*SAP*R
FGGGKTTAPFSSLLGGIPAQSCSTLTKLQAKGS*NRGTTCRGDSSTPTTTNCSRIILHSG
RNSGNFALKRSKGSGK*IQKRL*RQNARK*FVEYGKQRDRSRRVTISLYQRLIS*RALFT
VSGDFVLY*YIFGFPTNVV*YM*FGW*TAPHVSKGYPFRCTTLLHAXYK*HK*MRYARIX
RSHSFALR*DEIGYYTFX
>GCiWno542_i05.g1_3
RARYPSLAIVGSQRDNKQVTRLLIYSLFYTLYTYITGRRFLLINK*NAYFFVSD*FARIC
FVIINHV*RHNSLRHIRNSCCRSKLAETKWVKEVSPGVKGVTLSRECTLRSG*PRAHPSG
LGVAKLRPRFLLYSGEYPHSRAQHLRSCKRRVRETGEPPVGEIHRRQPQRTVRGLFSTVA
GTAETSR*NAQRVRESEYRRDYDVRMQENDL*NTGNKGIVRGGLLSRCTNV*YRKEHYLR
*VXISYYIDISLAFPLM*CNICDLGGRPPHTYQRDIRFDARHYYTRXTNSINRCVTREXI
GLIHSL*DKMKLDIIRF

>GCiWno596_h18.g1 CHROMAT_FILE: GCiWno596_h18.g1 PHD_FILE: GCiWno596_h18.g1.phd.1
           CHEM: term DYE: big TIME: Thu Oct 25 11:54:00 2001
           TEMPLATE: GCiWno596_h18 DIRECTION: rev
          Length = 898

 Score =  163 bits (408), Expect = 3e-40
 Identities = 80/81 (98%), Positives = 81/81 (99%)
 Frame = -2

Query: 1   RFENKMNLIIYTFIFVAGEPSEGMNKQDEVNLSKVLADPVYKAGNGFMEFMAGMFPQIRS 60
           RFENKMNLIIYTFIFVAGEPSEGMNKQDEVNLSKVLADPVYKAGNGFMEFMAGMFPQIRS
Sbjct: 285 RFENKMNLIIYTFIFVAGEPSEGMNKQDEVNLSKVLADPVYKAGNGFMEFMAGMFPQIRS 106

Query: 61  SVAYERMLEKKGKERVRQVKE 81
           SVAYERMLEKKGKERVRQVK+
Sbjct: 105 SVAYERMLEKKGKERVRQVKK 43

>GCiWno596_h18.g1
ATTCTGCGCATCCCTTCGATAATTTTTTGCTCCCTGTCATTTTTTCTTTACTTGCCGGACTCTCTCCTTTCCCTTCTTCT
CCAGCATTCTCTCGTATGCAACCGATGACCGAATTTGTGGGAACATACCAGCCATGAACTCCATAAAACCATTACCAGCT
TTATAAACGGGATCTGCCAATACCTTTGACAGATTTACTTCATCTTGTTTGTTCATACCTTCAGAAGGCTCTCCTGCAAC
GAAGATAAACGTATAAATTATCAAATTCATCTTATTCTCAAAGCGAATGAATGAGACCTATCTATTCTCGCGTAACGCAT
CTATTTATGCTATTTGTAACACGCGTGTAGTAGTGTCGTGCATCGAAACCGATATCCTTTGATTACGTTGTGGGCGGTCT
AACCACCAAATCACATATATTACACTACATTAGTGGGAAAGCCAAAGATATATCAATATAATACGAAATCCCCACTCACC
GTAAATAATGCTCTTTACGATATTAAACGTTGGTACAGCGAGATAGTAACCCGCCTCGAACGATCCCTTTGTTTCCCGTA
TTCTACAAATCATTTTCTTGCATTCTGACGTCATAATCTCTTCTGTATTCACTTTCCCGAACCCTTTGAGCGTTTTAACG
CGAAGTTTCCGCTGTTCCTGCCACTGTGGAGAATAATCCGCGAACAGNTCGTTGTGGTTGGCGTCGATGAATCTCCCCGA
CAGTTTTTCCCCTGGTCACGAACCCTTCGCTGCAGCTTCGTAATGGTGGACACGACTGTGCGGGTTTCCCCCGAGTAAAG
AAGAAACGGGCCGTAATTTTTCCACCCCAAACCGTTAGGTGCCCTCTAGGCTCCCAGACCAAGGGTCACTTCCGAAAAAG
GTACCCCTTGGCCCCGGG

>_4
PGPRGTFFGSDPWSGSLEGT*RFGVEKLRPVSSLLGGNPHSRVHHYEAAAKGS*PGEKLS
GRFIDANHNXLFADYSPQWQEQRKLRVKTLKGFGKVNTEEIMTSECKKMICRIRETKGSF
EAGYYLAVPTFNIVKSIIYGEWGFRIILIYLWLSH*CSVIYVIWWLDRPQRNQRISVSMH
DTTTRVLQIA*IDALRENR*VSFIRFENKMNLIIYTFIFVAGEPSEGMNKQDEVNLSKVL
ADPVYKAGNGFMEFMAGMFPQIRSSVAYERMLEKKGKERVRQVKKK*QGAKNYRRDAQN
>_5
PGAKGYLFRK*PLVWEPRGHLTVWGGKITARFFFTRGKPAQSCPPLRSCSEGFVTRGKTV
GEIHRRQPQRXVRGLFSTVAGTAETSR*NAQRVRESEYRRDYDVRMQENDL*NTGNKGIV
RGGLLSRCTNV*YRKEHYLR*VGISYYIDISLAFPLM*CNICDLVVRPPTT*SKDIGFDA
RHYYTRVTNSINRCVTRE*IGLIHSL*E*DEFDNLYVYLRCRRAF*RYEQTR*SKSVKGI
GRSRL*SW*WFYGVHGWYVPTNSVIGCIRENAGEEGKGESPASKEKMTGSKKLSKGCAEX
>_6
RGQGVPFSEVTLGLGA*RAPNGLGWKNYGPFLLYSGETRTVVSTITKLQRRVRDQGKNCR
GDSSTPTTTXCSRIILHSGRNSGNFALKRSKGSGK*IQKRL*RQNARK*FVEYGKQRDRS
RRVTISLYQRLIS*RALFTVSGDFVLY*YIFGFPTNVV*YM*FGG*TAHNVIKGYRFRCT
TLLHACYK*HK*MRYARIDRSHSFALRIR*I**FIRLSSLQESLLKV*TNKMK*ICQRYW
QIPFIKLVMVLWSSWLVCSHKFGHRLHTRECWRRRERRESGK*RKNDREQKIIEGMRRX

>rcigd048i16
TTCGCTTTGAGAATAAGATGAATTTGATAATTTATACGTTTATCTTCGTTGCAGGAGAGCCTTCTGAAGGTATGAACAAA
CAAGATGAAGTAAATCTGTCAAAGGTATTGGCAGATCCCGTTTATAAGGCTGGTAATGGTTTTATGGAGTTCATGGCTGG
TATGTTCCCACAAATTCGGTCATCGGTTGCATACGAGAGAATGCTGGAGAAGAAGGGAAAGGAGAGAGTCCGGCAAGTGA
AAGAAAAAATGACAGGGAGCAAAAAATTGATCGAAGGGATGCTGCAGAACCTTCAGGATTGGGAGACCGGCGAAGTTTAC
AACAATCAACAGCTCTCTTGTTACTTGACCGACCTATTTATGGCGGGAACCGATACCATGGCAACCACGGTTCATTGGTC
GCTTGTATTTCTCGCCCAAAATCCTCAAGTTCAAGAAAAAATGGCGGCAGAGGTGAAAAGTGTAGCCGGCAATGACGTCA
TCACTACGTCAATGATGGATTCTATGCCATACACAAGAGCTGTCATGCATGAATCGTCACGTCTGAGGCCGGTGTTTCCC
CTTTCGTTACGTCATCAAGCCACAAGTGACGTCACGGTTAAAGATTACGTCATACCAACCGGTACGAGCGTAGTAGCCAA
CTTGTGGGCAATACAGAACGACCCAAAATGGTGGAAGCAGCCGTCAGAATTCCGTCCGGAGCGACACGTCACAGAGGATG
GGGGATTCACCAAAAGCGAGAAGATCGTGCCGTTTTCTACCTGCAGCCCGGGGG

RFENKMNLIIYTFIFVAGEPSEGMNKQDEVNLSKVLADPVYKAGNGFMEFMAGMFPQIRS
SVAYERMLEKKGKERVRQVKE KMTGSKKLIEGMLQNLQDWETGEVYNNQQLSCYLTDLFM
AGTDTMATTVHWSLVFLAQNPQVQEKMAAEVKSVAGNDVITTSMMDSMPYTRAVMHESSR
LRPVFPLSLRHQATSDVTVKDYVIPTGTSVVANLWAIQNDPKWWKQPSEFRPERHVTEDG
GFTKSEKIVPFSTCSPG

>GCiWno733_a17.b1
GAAAAATGACAGGGAGCAAAAAATTGATCGAAGGGATGCTGCAGAATCTTCAGGATTGGGAAACCGGCGAAGTTTACAAC
AATCAACAGCTCTCTTGTTACTTGACCGACCTATTTATGGCGGGAACCGATACCATGGCAACCACGGTTCATTGGTCGCT
TGTATTTCTCGCCCAAAATCCTCAAGTTCAAGAAAAAATGGCGGCAGAGGTGAAAAGTGTAGCTGGCAATGACGTCATCA
CTACGTCAATGATGGATTCTATGCCATACACAAGAGCTGTCATGCATGAATCGTCACGTCTGAGGCCGGTGTTTCCCCTT
TCGTTACGTCATCAAGCCACAAGTGACGTCACGGTTAAAGATTACGTCATACCAACCGGTACGAGCGTAGTAGCCAACTT
GTGGGCAATACAGAACGACCCAAAATGGTGGAAGCAGCCGTCAGAATTCCGTCCGGAGCGACACGTCACTGAGGATGGGG
GATTCACCAAAAGCGAGAAGATCGTCCCGTTTTCTGTCGGGCCTCGATATTGCCTGGGAAGTCAGATAGCGATCTACCAG
CAGTTTATATTCCTAACTAACCTAGTGCGGGGATTCCGGTTTCGGTTCGATCAAGCCAAGGTAGAACCGGATCTGACAGG
TTTGATGACGTCAGTACTAGCACCTGTCAACGTTCACTTGGTGGCAGAGGAGCGCTAATTGTATTGACATAGAAACAATA
TGTTATTGCACCGTACGATGATGACGTTTGTGAAAGATGGAACTTGTATTTAATTTGTGACAACTTGAAACTGTCCCACT
TTTTACGTTACTTTGACCAGTGTGTAGATAACTGTCAATAAAATGCTCACCCATGTTTGGTCTTCTTTTAGGGGAATA

>sequence 54 3 accessions 485 to 1A1
PPGPTAWPLVGNLFSMGRQSHLILESMRKTYGDVFSVYFGSTLVVVVNG
LQW13645.x1  
LQW155902.y1 
LQW17980.x1  

>sequence 230, 48, 56 formerly 55, 80 (top two lines 2 accessions 50% to 2U1
VKEHKATFDREDVRDFIDAFLKEAELSKEPSFNDTQLLHYLHDLFLGGTETTT 230       STLRWALLCLLHYPQTQTKLREEINEVIGDGKVSYSCKVDIPYTCAFIQELYRY 230       RTLLPLSLTHKTNEKAMLGEYTIPKSTIVSVNLWAVHNDPNTWEEPS 230       MFKPERHLDESGHFVQSKHVIPFSVGPRHCVGEQLARMEVFIYLVSMVQKF 230       EFLPDRNANELPDIEKGSNGPAFVPQMFDIVAKVI

this part of the seq is now 13, 55, 80
NLWAVHNDPTVWNNPRQFKPERHIDDKGKYIQSNHVIPFSVGPRHCLGEQLARME 440
IFIFLVSMVQKFEF 398
LQW173304.x1 
LQW173304.y1
LQW266291.y1 
LQW274186.y1 2 DIFFS

>GCiWno244_g09.b1 CHROMAT_FILE: GCiWno244_g09.b1 PHD_FILE: GCiWno244_g09.b1.phd.1
           CHEM: term DYE: big TIME: Tue Oct  2 12:35:44 2001
           TEMPLATE: GCiWno244_g09 DIRECTION: fwd
          Length = 928

 Score =  117 bits (290), Expect = 6e-26
 Identities = 55/58 (94%), Positives = 57/58 (97%)
 Frame = -2

Query: 1   DGKVSYSCKVDIPYTCAFIQELYRYRTLLPLSLTHKTNEKAMLGEYTIPKSTIVSLNL 58
           DGKVSYSCKVD+PYTCAFIQELYRYRTLLPLSLTHKTNEKAMLGEYTIPKSTIVSL +
Sbjct: 798 DGKVSYSCKVDMPYTCAFIQELYRYRTLLPLSLTHKTNEKAMLGEYTIPKSTIVSLTV 625

>GCiWno244_g09.b1
GTGGATATAGCTGTTTGCAGTAAAACGACTGACGATCTGGTCATACCTGTGGGGCAGCAAAAGCACGGNCCATTCGTAAC
CTTTTTCAATATCAAGTAACTCATTAGCATTTCGGTCGGGAAGAAACTCAAACTTTTGTACCATCGAAACTAGGTAAATA
AACACTTCCATTCGAGCTAGTTGTTCTCCAACGCAGTGTCTAGGCCCCACGGAAAACGGGATGACGTGTTTCGATTGAAC
AAAATGCCCGCTTTCGTCCAGATGACGCTCAGGTTTAAACATGCTCGGTTCTTCCCATGTATTAGGATCGTTATGCACAG
CCCATAGGTTAACAGAAACCTAAACAGAGAAAAAAATTGAAAATTTTGATTTCATTCAGTTTAGTAGTTTCTTTTTTGTT
TATATATAGTGATGTGTGGAGAAAAAGAAACCTCTAGCACACAGTATTCCATATTTCCTTTATCGCCCTTTAAACAATTA
CAACGCACTTTTAGAGTCACGAGAATACGGTTATACAATTCTGTGGTTATTCTTTGTTTACTATTGAATGTGACGAGGAG
AAAAAAAAACAAAACAAAAGCGGCAAAATAAAGTTATTTAATGCTATAATAAGTCTACCTATAATACAGTTAGACTTACT
ATAGTTGACTTGGGTATTGTGTATTCTCCCAGCATTGCTTTCTCGTTTGTCTTATGGGTAAGACTCAACGGCAGTAATGT
TCTGTATCTGTAAAGTTCTTGTATGAAAGCACATGTGTATGGCATGTCAACCTTGCAACTGTAACTAACTTTTCCGTCGC
CTGCGAACAAACATGAATGAATGAATGAATGAATGAAATCTACTTATTTATATCGCATGGGCGTGGCTTATTNATTGTCG
CNAAGACATTCGTATACACGATGTNCTGTTTTTAACGCATCGTGCGTN

>GCiWno244_g09.b1_4
THDALKTXHRVYECLXDNX*ATPMRYK*VDFIHSFIHSCLFAGDGKVSYSCKVDMPYTCA
FIQELYRYRTLLPLSLTHKTNEKAMLGEYTIPKSTIVSLTVL*VDLL*H*ITLFCRFCFV
FFSPRHIQ**TKNNHRIV*PYSRDSKSAL*LFKGR*RKYGILCARGFFFSTHHYI*TKKK
LLN*MKSKFSIFFSV*VSVNLWAVHNDPNTWEEPSMFKPERHLDESGHFVQSKHVIPFSV
GPRHCVGEQLARMEVFIYLVSMVQKFEFLPDRNANELLDIEKGYEWXVLLLPHRYDQIVS
RFTANSYIH
>GCiWno244_g09.b1_5
XARCVKNXTSCIRMSXRQXISHAHAI*ISRFHSFIHSFMFVRRRRKS*LQLQG*HAIHMC
FHTRTLQIQNITAVESYP*DKRESNAGRIHNTQVNYSKSNCIIGRLIIALNNFILPLLFC
FFFSSSHSIVNKE*PQNCITVFS*L*KCVVIV*RAIKEIWNTVC*RFLFLHTSLYINKKE
TTKLNEIKIFNFFLCLGFC*PMGCA*RS*YMGRTEHV*T*ASSGRKRAFCSIETRHPVFR
GA*TLRWRTTSSNGSVYLPSFDGTKV*VSSRPKC**VT*Y*KRLRMXRAFAAPQV*PDRQ
SFYCKQLYPX
>GCiWno244_g09.b1_6
RTMR*KQXIVYTNVXATXNKPRPCDINK*ISFIHSFIHVCSQATEKLVTVARLTCHTHVL
SYKNFTDTEHYCR*VLPIRQTRKQCWENTQYPSQL**V*LYYR*TYYSIK*LYFAAFVLF
FFLLVTFNSKQRITTELYNRILVTLKVRCNCLKGDKGNMEYCVLEVSFSPHITIYKQKRN
Y*TE*NQNFQFFSLFRFLLTYGLCITILIHGKNRACLNLSVIWTKAGILFNRNTSSRFPW
GLDTALENN*LEWKCLFT*FRWYKSLSFFPTEMLMSYLILKKVTNGPCFCCPTGMTRSSV
VLLQTAIST


>rcibd035o22 
          Length = 681

 Score =  189 bits (474), Expect = 1e-47
 Identities = 87/102 (85%), Positives = 92/102 (89%)
 Frame = -3

Query: 1   NLWAVHNDPTVWNNPRQFKPERHIDDKGKYIQSNHVIPFSVGPRHCLGEQLARMEIFIFL 60
           NLWAVHNDPTVWNNPRQFKPERHIDDKGKYIQSNHVIPFSVGPRHCLGEQLARMEIFIFL
Sbjct: 565 NLWAVHNDPTVWNNPRQFKPERHIDDKGKYIQSNHVIPFSVGPRHCLGEQLARMEIFIFL 386

Query: 61  VSMVQKFEFLPDRNANELPDIEKGSNGPAFVPQMFDIVAKVI 102
           VSMVQKFEFLPD N  +LP+++ G NG AFVP  F +VAK I
Sbjct: 385 VSMVQKFEFLPDPNKTDLPELDDGVNGVAFVPYPFKLVAKEI 260

>GCiWno617_o04.b1 CHROMAT_FILE: GCiWno617_o04.b1 PHD_FILE: GCiWno617_o04.b1.phd.1
           CHEM: term DYE: big TIME: Mon Oct 29 10:53:49 2001
           TEMPLATE: GCiWno617_o04 DIRECTION: fwd
          Length = 926

 Score =  109 bits (270), Expect = 8e-24
 Identities = 49/51 (96%), Positives = 51/51 (99%)
 Frame = +1

Query: 34  DTQLLHYLHDLFLGGTETTTSTLRWALLCLLHYPQTQTKLREEINEIIGRH 84
           DTQLLHYLHDLFLGGTETTTSTLRWALLCLLHYPQTQTKLREEINE+IG+H
Sbjct: 70  DTQLLHYLHDLFLGGTETTTSTLRWALLCLLHYPQTQTKLREEINEVIGKH 222

>GCiWno617_o04.b1
TCATACACAGACCATCTTANCCCAGCCCTTTGTTTTAAGCCTCCAACAATTATAATACATACGTTATAGGACACACAGCT
TCTCCATTACCTACACGATCTGTTTCTTGGTGGAACTGAAACAACAACAAGTACGTTAAGATGGGCTCTCCTGTGTCTTC
TGCATTATCCACAAACTCAAACAAAACTAAGAGAGGAAATAAATGAAGTCATAGGTAAGCATCTTATAGTTAAGGGTACT
GTTGCCATTATAAGCGTGGTCTTGAGAAATATATTTAACTGCAATCACTCCAACCATCATGTGGTTATGAATTGTCTAAT
CTAAGTTGTCGGCTATACATAAAAAAACTCAAAGTTGCATACGAACACGATGTGTTTAAAACAGAACATCGTGTTATAAC
GATTGTCTTTGCGACAATAAATAAGCCACGCCATGCGATATAAATAAGTTAGATTCATTCATTCATTCATTCATTCATGT
TTTGTTCGCAGGCGACGGAAAAGTTAGTTACAGTTGCAAGGTTGACATACCATACACATGTGCTTTCATACAAGAACTTT
ACAGATACAGAACATTACTGCCGTTGAGTCTTACCCATAAGACAAACGAGAAAGCAATGCTGGGAGAATACACAATACCC
AAGTCAACTATAGTAAGTCTAACTGTATTATANGTAGACTTATTATAGCATTAAATAACTTTATTTTGCCGCTTTTGTTT
TGTTTTTTTTCTTCTCGTCACATTCAATTAGTAACAAAGAATAACCACAGAATTATATAACCGTATTCTCATGACTCTAA
AAGTGCGTTGTAATTGTTCAAAAGCGATAAAGGAAATATGGGATACTGTGTGCTANGAGTATCCTTTTCTTCCCACATCA
CCTTTTTAAAACAAAAAGAAACCTTTTANCTTAATGAAATCAAAAN

>GCiWno617_o04.b1_1
SYTDHLXPALCFKPPTIIIHTL*DTQLLHYLHDLFLGGTETTTSTLRWALLCLLHYPQTQ
TKLREEINEVIGKHLIVKGTVAIISVVLRNIFNCNHSNHHVVMNCLI*VVGYT*KNSKLH
TNTMCLKQNIVL*RLSLRQ*ISHAMRYK*VRFIHSFIHSCFVRRRRKS*LQLQG*HTIHM
CFHTRTLQIQNITAVESYP*DKRESNAGRIHNTQVNYSKSNCIIXRLIIALNNFILPLLF
CFFSSRHIQLVTKNNHRII*PYSHDSKSAL*LFKSDKGNMGYCVLXVSFSSHITFLKQKE
TFXLNEIKX
>GCiWno617_o04.b1_2
HTQTILXQPFVLSLQQL*YIRYRTHSFSITYTICFLVELKQQQVR*DGLSCVFCIIHKLK
QN*ERK*MKS*VSIL*LRVLLPL*AWS*EIYLTAITPTIMWL*IV*SKLSAIHKKTQSCI
RTRCV*NRTSCYNDCLCDNK*ATPCDINKLDSFIHSFIHVLFAGD GKVSYSCKVDIPYTC
AFIQELYRYRTLLPLSLTHKTNEKAMLGEYTIPKSTIVSL TVLXVDLL*H*ITLFCRFCF
VFFLLVTFN**QRITTELYNRILMTLKVRCNCSKAIKEIWDTVCXEYPFLPTSPF*NKKK
PFXLMKSKX
>GCiWno617_o04.b1_3
IHRPSXPSPLF*ASNNYNTYVIGHTASPLPTRSVSWWN*NNNKYVKMGSPVSSALSTNSN
KTKRGNK*SHR*ASYS*GYCCHYKRGLEKYI*LQSLQPSCGYELSNLSCRLYIKKLKVAY
EHDVFKTEHRVITIVFATINKPRHAI*IS*IHSFIHSFMFCSQATEKLVTVARLTYHTHV
LSYKNFTDTEHYCR*VLPIRQTRKQCWENTQYPSQL**V*LYYX*TYYSIK*LYFAAFVL
FFFFSSHSISNKE*PQNYITVFS*L*KCVVIVQKR*RKYGILCAXSILFFPHHLFKTKRN
LLX**NQX


>sequence 56, 230 1 accession 47% to 2U1 C-term may be hybrid
DRQLVHYVRELFKAGTETSTGTLRWAMLCLIHYPEAQTKIRSEIYDVLGKCS = seq 13?

VSVNLWAVHNDPNTWDEPSKFKPERHLDEKGHYVQSKHVIPFSVGPRHCVGEQLARME
VYIYLVSMVQKFEFLPDPDVTELPDIEQGSNGPAFVPQMLDIVAKVI*
JWB1514.y1 

>GCiWno408_i21.g1 CHROMAT_FILE: GCiWno408_i21.g1 PHD_FILE: GCiWno408_i21.g1.phd.1
           CHEM: term DYE: big TIME: Wed Oct 10 12:50:32 2001
           TEMPLATE: GCiWno408_i21 DIRECTION: rev
          Length = 900

 Score =  103 bits (255), Expect = 6e-22
 Identities = 48/52 (92%), Positives = 49/52 (93%)
 Frame = +2

Query: 1   DRQLVHYVRELFKAGTETSTGTLRWAMLCLIHYPEAQTKIRSEIYDVLGKCS 52
           DRQLVHYVRELFKAGTETSTGTLRWAMLCLIHYP AQ KIR EI+DVLGKCS
Sbjct: 326 DRQLVHYVRELFKAGTETSTGTLRWAMLCLIHYPGAQEKIRKEIFDVLGKCS 481

>GCiWno408_i21.g1_1
YVTL*V*YER*LLSPVLDKCSLRLDTSLRLYSTAR*DETPVGCGV*YH*SCFEQLTMVYI
GVVRTRFYNSLNVICLLPNXGRENRMKRCPIFPTLLYSLKKLKFTYL*GPTACTLRT*TL
QSWY*NFYGNS*MGDVVSHPLSWGTGENQERNI*RLR*V*LQYGVL*LQLKTINSTIK**
YCLKKNVLKK*KS*TLNILDIANIVH**IKYYTLFFNIFSSK*IS*IK*KVFIYRSI*FV
VF*K*CNVFFIFNRVLTP*RLFVFCSHANTTFFPALNESVTPNAIHLSGFHTRIGFGVSK
>GCiWno408_i21.g1_2
M*LCRFNTSGSYLARCWTNAPCAWILHYVYIVLRDKMKHL*AVGYNITDRVLNN*QWSIL
ES*GHGFIIL*MLFVYYQMXDEKIE*KGVPSSPPYYIA*RN*NSLIFKDRQLVHYVRELF
KAGTETSTGTLRWAMLCLIHYPGAQEKIRKEIFDVLGKCSCNMEFCSCS*KQ*TAQ*NNN
TA*KRMY*KSENRKP*IYLI*QILCINR*NITLCFLIFLVQSELARLNKKFLFTEVFNLS
YSKNDATCFLSLTVF*PPDDFLYFARTPIPLFSQH*MNL*RRMPFTFPGSIQE*GSGFP
>GCiWno408_i21.g1_3
CNFVGLIRAVVT*PGAGQMLLAPGYFITFI*YCEIR*NTCRLWGIISLIVF*TINNGLYW
SREDTVL*FFECYLFTTKXXTRK*NEKVSHLPHPTI*PKETKIHLSLRTDSLYITYVNSS
KLVLKLLRELLDGRCCVSSTILGHRRKSGKKYLTS*VSVVAIWSFVVAAKNNKQHNKIII
LLEKECIKKVKIVNPKYT*YSKYCALIDKILHSVF*YF*FKVN*LD*IKSFYLPKYLICR
ILKMMQRVFYL*PCFNPLTTFCILLARQYHFFPSIE*ICNAECHSPFRVPYKNRVRGFQ



>GCiWno617_o04.g1 CHROMAT_FILE: GCiWno617_o04.g1 PHD_FILE: GCiWno617_o04.g1.phd.1
           CHEM: term DYE: big TIME: Mon Oct 29 10:53:49 2001
           TEMPLATE: GCiWno617_o04 DIRECTION: rev
          Length = 934

 Score = 59.7 bits (142), Expect = 5e-09
 Identities = 31/47 (65%), Positives = 34/47 (71%)
 Frame = -1

Query: 1   VYIYLVSMVQKFEFLPDPDVTELPDIETRFKWTSIRTPDVDIVAKVI 47
           V+IYLVSMVQKFEFLPDP+ TELPDIE      +      DIVAKVI
Sbjct: 625 VFIYLVSMVQKFEFLPDPNATELPDIEKGSNGPAFVPQMFDIVAKVI 485




JWB1514.y1 

           CHEM: term DYE: ET TIME: Wed Mar 21 17:13:31 2001
           TEMPLATE: JWB1514 DIRECTION: rev
          Length = 657

 Score =  176 bits (442), Expect = 6e-44
 Identities = 79/85 (92%), Positives = 82/85 (95%)
 Frame = +3

Query: 1   VSVNLWAVHNDPNTWDEPSKFKPERHLDEKGHYVQSKHVIPFSVGPRHCVGEQLARMEVY 60
           VSVNLWAVHNDPNTWDEPSKFKPERHLDEKGHYVQSKHVIPFSVGPRHCVGEQLARMEVY
Sbjct: 300 VSVNLWAVHNDPNTWDEPSKFKPERHLDEKGHYVQSKHVIPFSVGPRHCVGEQLARMEVY 479

Query: 61  IYLVSMVQKFEFFPDPNEPDLPDVE 85
           IYLVSMVQKFEF PDP+  +LPD+E
Sbjct: 480 IYLVSMVQKFEFLPDPDVTELPDIE 554
>JWB1514.y1
>lcl|JWB1514.y1 CHROMAT_FILE: JWB1514.y1 PHD_FILE: JWB1514.y1.phd.1 CHEM: term DYE: ET TIME: Wed Mar 21 17:13:31 2001 TEMPLATE: JWB1514 DIRECTION: rev
TATAGCATAACATAACTTCGTTGCCTCTTGTTATTATTTTCTGGGTCACATTCGATAGTAAACAAAGAATATTTACATAA
TTATATAACCGTATGCTCAGCACGACTCTAAATGAACATAACCGTATCCTCACGACTCTAAAAGAACGTGTAATGTTTAA
AGCACGACAAACAAAATATGGGATAATATGTGCTAAAGGCATCCATCTTACCCCACAACACCATTAACAAAACTGATTAG
ATAAAACAGTAATTATGACACTGAATGTTACCAAAACTTCCAATTTTTTCTCTGTTTAGGTTTCTGTTAACTTGTGGGCT
GTACATAACGATCCTAATACATGGGACGAACCGAGCAAGTTTAAACCTGAGCGTCATCTTGATGAAAAAGGACATTATGT
TCAATCGAAACACGTCATCCCATTTTCGGTTGGGCCTAGACACTGTGTTGGAGAACAACTAGCTCGTATGGAAGTGTATA
TTTACTTGGTTTCGATGGTTCAAAAGTTTGAGTTTCTTCCTGACCCAGATGTCACTGAATTGCCTGACATTGAAACAAGG
TTCAAATGGACCAGCATTCGTACCCCAGATGTTGATATTGTTGCTAAAGTGATTTGATAATCACGTTTTCGATTGCTTTT
TTTTCAACGAGTGTAGT

>_1
YSIT*LRCLLLLFSGSHSIVNKEYLHNYITVCSARL*MNITVSSRL*KNV*CLKHDKQNM
G*YVLKASILPHNTINKTD*IKQ*L*H*MLPKLPIFSLFRFLLTCGLYITILIHGTNRAS
LNLSVILMKKDIMFNRNTSSHFRLGLDTVLENN*LVWKCIFTWFRWFKSLSFFLTQMSLN
CLTLKQGSNGPAFVPQMLILLLK*FDNHVFDCFFFNECS
>_2
IA*HNFVASCYYFLGHIR**TKNIYIII*PYAQHDSK*T*PYPHDSKRTCNV*STTNKIW
DNMC*RHPSYPTTPLTKLIR*NSNYDTECYQNFQFFLCLGFC*LVGCT*RS*YMGRTEQV
*T*ASS**KRTLCSIETRHPIFGWA*TLCWRTTSSYGSVYLLGFDGSKV*VSS*PRCH*I
A*H*NKVQMDQHSYPRC*YCC*SDLIITFSIAFFSTSV
>_3
*HNITSLPLVIIFWVTFDSKQRIFT*LYNRMLSTTLNEHNRILTTLKERVMFKARQTKYG
IICAKGIHLTPQHH*QN*LDKTVIMTLNVTKTSNFFSV*VSVNLWAVHNDPNTWDEPSKF
KPERHLDEKGHYVQSKHVIPFSVGPRHCVGEQLARMEVYIYLVSMVQKFEFLPDPDVTEL
PDIETRFKWTSIRTPDVDIVAKVI**SRFRLLFFQRV*

>JWB1514.x1
>lcl|JWB1514.x1 CHROMAT_FILE: JWB1514.x1 PHD_FILE: JWB1514.x1.phd.1 CHEM: term DYE: ET TIME: Wed Mar 21 17:11:39 2001 TEMPLATE: JWB1514 DIRECTION: fwd
AGAATGTTATGGGGATACGTTGGTTGGGATGGCGGGGCAACGATTTAATTACGTTCTGCGTTTCGCGCGGCGGAAAGCGA
AGTCGTTATAACACGGGTGTTCTACGTTTGTAACTTTGTAGATTTACGTTTATATATAGTAGTGTGGAGGAAGATGGGAC
ACTTTTTTATTCCATTTTATCATACCATTTAGTAGTAATCAAATAACATTCAAAGAATTATAAAACCGTATCCTCACGAC
TCCCATAGACCGTTGTTAATTGTCTAAAACACGTTCAGGATATTTAGATATTATGGTTAAAGGTGTCCCATCTCCCCCCA
TCCTACTACATAGCATAAATAAATTTCACTTATCTTTTTAGGACCGACAGCTTGTACATTACGTACGTGAACTCTTCAAA
GCTGGCACTGAAACTTCTACGGGAACTCTAAGATGGGCGATGCTGTGTCTCATCCACTATCCTGAAGCACAGACGAAAAT
TAGAAGTGAAATATATGATGTCTTAGGTAAGTGTAGTTGCAGAACGTAGTTTCGTAGTTAAAGCTAAAAAACAATAAAAA
ACTGAATAAAATAATGAAACTGCTTGAAAATTAACGTAATAAAAACAGTGAAAATCGTAAAGCCTATATATACTTGATAT
AGTAAATATTGTGCATTAGATAAAAATATTACAGTATGTTTTTTTTAGTAATTTTAGTAATGTGATCACAGTGAATTAGC
AAAATTAACAAATGTTTTTC

>CIONA SAVIGNYI SEQUENCE 71% TO CIONA INTESTINALIS seq 2 70% TO SEQ 4
This sequence carefully checked for contigiuity between exons
This sequence is not hybrid between multiple genes
MLQRMLNEINVSTSFIFLTVFLGLYYWYRRPKNFPPGPRGIPFLGVLPFLGNYPERKMRK
WSNKYGPVMSVRMGRQDWVVLGDHETIQQ (0)
GLVKHGNAFSGRPSIATIDQITEGHGVLFIDYNDHWKRQRRFGLSTLRG (2)
FGVGKRSMEDRITEEVAYLNDAIRTHDGKAFDIQ (0)
SILSNAVSNNICSIVMGRRFDYDDERFKEIMGRLARG (2)
FNDPEASFVLQILIFMPALINFPYFSRINGELMEDVRVI (1)
PELLREIVEEHKASYEQDNHRDFIDAFLGEQKAENGAKTFT (0)
DTQLLQYVRDLFVAGTETTTSTVRWSLLCLIHNPETQEKLRKEIFEVL (1)
GPEKIPAFENKSKMPYTSAFIQEIYRYRTLVPLSVTHMTNEDAHISGYTIPKGTT (0)
IAPNLWAVHNDPEEWDEPNKFKPERHLDAGGNFVQLKHVIPFSVGPRHCLGEQLARMEVF 
IFLVSLVQKFEFLPDPKATVLPDIENGASGAAYVPLPFKIVAKVV*

>cibd042f04_3 = seq 75% identical to seq 57 but not same seq 
old 57 had two genes joined that were different.
May join seq 64
MLPAFLGSLTSNYVTFCLTGVCTLVLFVYYYWWKLPHPRYPPGVRGIPVLGALPFLGKFAHKDI
MRWSREKYGPIMSVRFGQKDSVVLNDYESIYEAMVKQGPAFRSRPTMKLITSYSNGYGFG
FAEGHTKYMELRHFTFKILRGFGIGGRYLEDRISDHAQELVQDFKKLDGKATDVR
MIVATTIGNVIASIVLGKKYHPKDKDFQRHLQLILNN 
FGNEETASYILCMMYFPSLRHIPPFKNAWKTFMDEHFEQL
DFCRKEIEEHKNNLNVNDPKDFVDAFLVEMKKHSPEGSWFH (0?)
EESLILCVIDLFFGGTETSTSTVMWAMVVLINFPQIQEK
GCiWno45_h10.g1
GCiWno1043_m04.b1

>sequence 64 1 accession 39% to 2J2
          Length = 211

 Score = 157 (55.3 bits), Expect = 6.7e-15, P = 6.7e-15
 Identities = 31/39 (79%), Positives = 32/39 (82%)

Query:    42 EESLILCVMDLFFXGTXNSTSTVMWXXXXLINFPQIQEK 80
             EESLILCV+DLFF GT  STSTVMW    LINFPQIQEK
Sbjct:     1 EESLILCVIDLFFGGTETSTSTVMWAMVVLINFPQIQEK 39

>GCiWno474_c04.b1_1
ANACIACRVVLLEDXXLLAVINNIIG*KCE*IKKQLKHLIFPDDSCNHHWKCYREYCSWK
EISSKR*RFPTSSPANT*QVSYITVVHNTIFITFIILGFKGINDDRALYYTSCLITSYHI
C*FYLRVRGTACKTTFKLFLCLVLETKKLQAIFYV*CIFHHCVIFHHSRTPGRRLWMSIL
NNWVGSCNQVFDGFKIFPSLLKVFAGKRLKNTRITLM*MIPKILSMLSLLK*RNTYLKVH
GSMYVVIKSKCWSWN*DLLIRXR*NPKLFKQLF*EESLILCVNGLVFWVEPXTAQAQ*CG
XRXVLINFPQIQRNX
>GCiWno474_c04.b1_2
QMLALPAGSYS*RXXPF*PL*ITLLVENVNK*KNS*NI*FSQMIVATTIGNVIASIVLGK
KYHPKDKDFQRHLQLILNKLVI*P*YIIPFL*LLLSSVLRASTTTVLCIIPHA*LRVITY
ANFISELEALRARQRLNYFFV*FWKRRNCKLYSMYDVFSIIASYSTIQERLEDVYG*AF*
TTGWVLVTKCLMGLKYFPLY*RFLPERD*RTQE*P*CE*SQRFCRCFPC*NEETLT*RFM
VPCML*LSPNAGLGIKTC*LEXDEIRNCSNNYFRKNLSFFV*MDLFFGWNPEQHKHSNVG
RGXSLSTFHRYRET
>GCiWno474_c04.b1_3
KCLHCLQGRTLRGXXPFSRYK*HYWLKM*INKKTVKTSNFPR**LQPPLEMLSRVLFLER
NIIQKIKISNVISS*YLTS*LYNRST*YHFYNFYYPRF*GHQRRPCFVLYLMPDYELSHM
LILSPS*RHCVQDNV*IISLFSFGNEETASYILCMMYFPSLRHIPPFKNAWKTFMDEHFE
QLGGFL*PSV*WV*NISLFIEGFCRKEIEEHKNNLNVNDPKDFVDAFLVEMKKHLPEGSW
FHVCCD*VQMLVLELRPAD*XKMKSETVQTIILGRISHSLCEWTCFLGGTXNSTSTVMWX
EGCPYQLSTDTEK

>sequence 57, 104 55% to seq 66
MFSTLLGSLALNYISTCLLGIFTLGVCMYYYWWKFPHPRYPPGVRGIPVLGALPF
LSKFAHKDITRWSREKYGPIMSVRAGQTDSIFLNDYESIYEAMIKQGPAFRSRPAMKLIT
AYSNGYGLGFSESHKKHSDLRQFSLKTLRGFGIGGRQLEDRISDIAQELVQAFEMLDGKATDVK
MIVGKTVGNVIASIVLGKKFHGDDKDFQRHINLIFDS (2?)
FGDEETAKYVLAMMYFPSLRH IPPFKNAWDQTLKGHFEQL (1)
DFCRKEIEELKKTLDVNDPRGYVDAFLIEMKKHSPEDSWFH (0)
EESLIVCVVDLFFAGTDTSTSTVMWAMVALLNFPEIQEKLHKEIANAT (1?)
QIYSGEALPSLDHRDELPLLNAFIQELYRHMTLGPFGVPHETTTDAYIGGYCIPKNTR (0) 
VITNIWAVHYDPNTWENPSEFNIYRHIDEDGKFVPSKKVIPFGIGCRSCLGEKLARLE
VFHFLANIIKRFEILPDPESKELPDYRDGVNGFVYVPYRFKLVAKPRIDNK*
LQW137034.y1  heme opposite end = seq 104 not same gene (gene cluster?)
LQW234676.y1 
LQW43927.y1  2 diffs
LQW59428.x1  
LQW199443.y1 
DEV44236.x1 N-TERM
LQW192054.y1 N-TERM
LQW192054.x1  wxxp to heme

SEQUENCE 104 N-TERM TO KYG 34% TO 1A1
MFSTLLGSLALNYISTCLLGIFTIGVCMYYYWWKFPHQRYPPGVRGIPVLGALPFLSKFAHKDITRWSREKYG
PIMSVRAGQTDSIFLNDYESIYEV (1) ggt
DEV56294.y1 
LQW137034.x1 N-term opposite end = seq 57 not same gene (gene cluster?)
LQW225107.y1 
>cibd002l18 
          Length = 683

 Score =  208 bits (525), Expect = 2e-53
 Identities = 96/96 (100%), Positives = 96/96 (100%)
 Frame = +2

Query: 1   MFSTLLGSLALNYISTCLLGIFTIGVCMYYYWWKFPHQRYPPGVRGIPVLGALPFLSKFA 60
           MFSTLLGSLALNYISTCLLGIFTIGVCMYYYWWKFPHQRYPPGVRGIPVLGALPFLSKFA
Sbjct: 26  MFSTLLGSLALNYISTCLLGIFTIGVCMYYYWWKFPHQRYPPGVRGIPVLGALPFLSKFA 205

Query: 61  HKDITRWSREKYGPIMSVRAGQTDSIFLNDYESIYE 96
           HKDITRWSREKYGPIMSVRAGQTDSIFLNDYESIYE
Sbjct: 206 HKDITRWSREKYGPIMSVRAGQTDSIFLNDYESIYE 313


>cibd063p18 
          Length = 709

 Score =  103 bits (255), Expect = 2e-22
 Identities = 49/52 (94%), Positives = 50/52 (95%)
 Frame = +2

Query: 1   MIVATTIGNVIASIVLGKKFHGDDKDFQRHINLIFDSFGDEETAKYVLAMMY 52
           MIV  T+GNVIASIVLGKKFHGDDKDFQRHINLIFDSFGDEETAKYVLAMMY
Sbjct: 554 MIVGKTVGNVIASIVLGKKFHGDDKDFQRHINLIFDSFGDEETAKYVLAMMY 709

>cibd063p18
TCGGCACGAGGGAAATATGTTTTCCACATTGTTGGGGTCGTTGGCCCTTAATTACATCAGTACCTGTTTGCTCGGGATTT
TCACCCTTGGTGTTTGCATGTACTATTACTGGTGGAAGTTTCCCCACCCACGGTACCCACCTGGGGTGAGGGGAATACCC
GTGTTGGGGGCTTTACCCTTCCTTAGTAAATTTGCGCACAAAGACATTACGCGGTGGTCACGTGAGAAGTATGGACCTAT
AATGTCTGTGCGGGCCGGACAAACTGATTCGATATTTTTAAACGATTATGAATCCATTTATGAGGCTATGATCAAACAAG
GTCCAGCATTTCGATCACGTCCAGCCATGAAATTGATCACCGCTTACTCAAACGGCTACGGGCTTGGTTTTTCAGAGTCC
CACAAGAAACATTCGGATCTGCGGCAATTTTCATTAAAGACGTTACGTGGGTTTGGCATTGGGGGTCGACAGTTGGAAGA
CCGCATCTCAGATATTGCACAGGAACTTGTTCAAGCCTTTGAAATGTTAGATGGAAAAGCAACGGACGTAAAGATGATTG
TTGGAAAGACCGTTGGAAATGTTATCGCGAGTATTGTTCTCGGAAAAAAGTTTCATGGAGACGATAAAGACTTCCAGCGT
CACATTAACCTCATATTTGACAGCTTTGGGGACGAAGAAACTGCGAAGTACGTTCTAGCTATGATGTAT

RHEGNMFSTLLGSLALNYISTCLLGIFTLGVCMYYYWWKFPHPRYPPGVRGIPVLGALPF
LSKFAHKDITRWSREKYGPIMSVRAGQTDSIFLNDYESIYEAMIKQGPAFRSRPAMKLIT
AYSNGYGLGFSESHKKHSDLRQFSLKTLRGFGIGGRQLEDRISDIAQELVQAFEMLDGKA
TDVK MIVGKTVGNVIASIVLGKKFHGDDKDFQRHINLIFDSFGDEETAKYVLAMMY

>cibd039c06 
          Length = 705

 Score =  108 bits (266), Expect(2) = 5e-41
 Identities = 49/49 (100%), Positives = 49/49 (100%)
 Frame = +1

Query: 70  VLNAVFFKDFCRKEIEELKKTLDVNDPRGYVDAFLIEMKKHSPEDSWFH 118
           VLNAVFFKDFCRKEIEELKKTLDVNDPRGYVDAFLIEMKKHSPEDSWFH
Sbjct: 217 VLNAVFFKDFCRKEIEELKKTLDVNDPRGYVDAFLIEMKKHSPEDSWFH 363

>cibd039c06
GGAAAAAGTTTCATGGAGACGATAAAGACTTCCAGCGTCACATTAACCTCATATTTGACAGCTTTGGGGACGAAGAAACT
GCGAAGTACGTTCTAGCTATGATGTATTTTCCATCATTGCGTCATATTCCACCATTTAAAAACGCTTGGGATCAGACTCT
AAAGGGCCATTTTGAACAACTTGGTGAGTTCTTTTGAGTAACGGAATGTTTGATAAGTTTTAAACGCTGTTTTTTTTAAA
GATTTTTGTCGGAAAGAGATTGAAGAACTGAAGAAGACCCTTGATGTAAATGATCCCAGAGGTTATGTCGATGCTTTCCT
TATTGAGATGAAGAAACACTCTCCTGAAGACTCATGGTTCCATGAAGAATCTCTCATCGTTTGTGTGGTTGACCTATTTT
TTGCTGGGACAGATACGAGCACAAGCACAGTAATGTGGGCGATGGTTGCCCTTCTAAACTTTCCAGAGATACAAGAGAAA
CTTCATAAAGAAATAGCCAATGCAACAGGTGTGTTGGGTGAGTTCTTATTCCAATTCTTTAACAAATTTACTCAGGTGAA
GCACTTCCAAGTTTGGACCACAGGGATGAACTTCCATTACTCAACGCTTTTATTCAAGAACTTTACCGCCACATGACCCT
TGGACCCTTTGGTGTTCCGCACGAAACCACAACCGATGCGTACATTGGCGGATACTGTATCCCTA

>_1
                              GKSFMETIKTSSVTLTSYLTALGTKKLRSTF*L*CIFHHCVIFHHLKTLGIRL*RAILNN
                              LVSSFE*RNV**VLNAVFFKDFCRKEIEELKKTLDVNDPRGYVDAFLIEMKKHSPEDSWF
                              HEESLIVCVVDLFFAGTDTSTSTVMWAMVALLNFPEIQEKLHKEIANATGVLGEFLFQFF
                              NKFTQVKHFQVWTTGMNFHYSTLLFKNFTAT*PLDPLVFRTKPQPMRTLADTVSL
                              >_2
                              EKVSWRR*RLPASH*PHI*QLWGRRNCEVRSSYDVFSIIASYSTI*KRLGSDSKGPF*TT
                              W*VLLSNGMFDKF*TLFFLKIFVGKRLKN*RRPLM*MIPEVMSMLSLLR*RNTLLKTHGS
                              MKNLSSFVWLTYFLLGQIRAQAQ*CGRWLPF*TFQRYKRNFIKK*PMQQVCWVSSYSNSL
                              TNLLR*STSKFGPQG*TSITQRFYSRTLPPHDPWTLWCSARNHNRCVHWRILYP
                              >_3
                              KKFHGDDKDFQRHINLIFDSFGDEETAKYVLAMMYFPSLRHIPPFKNAWDQTLKGHFEQL
                              GEFF*VTECLISFKRCFF*RFLSERD*RTEEDP*CK*SQRLCRCFPY*DEETLS*RLMVP
                              *RISHRLCG*PIFCWDRYEHKHSNVGDGCPSKLSRDTRETS*RNSQCNRCVG*VLIPIL*
                              QIYSGEALPSLDHRDELPLLNAFIQELYRHMTLGPFGVPHETTTDAYIGGYCIP

>rcibd039c06
TAAATGAACCGATAAAAGATACCGAAAACATAAATCAATTTATATAACGCCTAGTACAATTATATAGCCATGATACAGGT
TATATTCTTTCAAAAAATTGTGCCGACCTTACAACAATACTGGCATCATCGCTGCTACCTTCAATTACTCCGTTTGTTCT
CAAACAAAAAACAAGAAAGAGAGTAACAAAAAAACACGAATACGCGATATCTTAAACTTGCTATATGTTGTTTGGATTAA
AATAGGCGGCATCATTCGGAAATACTGGTGATGCATTCGGAAATGTGTGTGACATCACAAATGAATGTTACATCACACAG
AAAAACGGAAAAGGATCAATAATACATCTACATTTGTTAGAATAGTTTAATATCAGTGGCGGCTGGCGGATTTTGTATTC
ACAGGAACATAATACACCGCCTGTGCTTTATATGAGGTTATAGTACATATGACGTCTATAACGTGACAGTATTATTTGTT
GTCGATTCTCGGTTTAGCAACAAGTTTAAAGCGATAGGGGACATAAACAAAACCATTGACACCATCTCTATAGTCGGGAA
GCTCCTTGCTCTCTGGATCAGGAAGGATCTCGAACCTCTTAATGATGTTGGCAAGGAAGTGGAAGACTTCAAGCCTTGCC
AGCTTCTCACCAAGACACGATCTGCATCCGATTCCAAACGGGATCACTTTCTTCGAAGGAACGAACTTTCCGTCTTCGTC
AATATGACGATAAATGTTGAACTCACT

SEFNIYRHIDEDGKFVPSKKVIPFGIGCRSCLGEKLARLEVFHFLANIIKRFEILPDPES
KELPDYRDGVNGFVYVPYRFKLVAKPRIDNK*

ciad062j09 : 3'EST / 5'EST 
ciad099k01 : 3'EST / 5'EST 
cibd002l18 : 3'EST / 5'EST 
cibd004l10 : 3'EST / 5'EST 
cibd020g22 : 3'EST / 5'EST 
cibd022h14 : 3'EST / 5'EST 
cibd038c06 : 3'EST / 5'EST 
cibd038i10 : 3'EST / 5'EST 
cibd039c06 : 3'EST / 5'EST 
cibd063p18 : 3'EST / 5'EST 
cibd073g04 : 3'EST / 5'EST 
cibd078j24 : 3'EST / 5'EST 
cicl036p20 : 3'EST / 5'EST 
cicl048e11 : 3'EST / 5'EST 
cicl067e03 : 3'EST / 5'EST 
cicl093d07 : 3'EST / 5'EST 
cigd037i10 : 3'EST / 5'EST

>DEV44236.x1
>lcl|DEV44236.x1 CHROMAT_FILE: DEV44236.x1 PHD_FILE:
DEV44236.x1.phd.1 CHEM: term DYE: ET TIME: Wed Mar 21 15:15:16 2001
TEMPLATE: DEV44236 DIRECTION: fwd 
TTCGCTTACTTTAATCCTTGGTCGTGTCTGAAACGCTGGGCCTTGTTTGACCAAAGCCTATATGGCAAGTTTTTTGTTAC

ATATAGTAGGATGGGGTAATACGGGACACCCTTAGCAAATAATACCCAAATATTCTGAACGTGTGTTAAATAATTAACAA

CAGTCTATGGGAATCATGAGAATACGGATTTATATTTATTTGGATGTTCTTTGTTTACTGCCAAATGGGACAAGAACGAA

AACGTGTCCCGTCTTCCCCTACCCGACTATAATCGTAATCCCGTCTTCCCCTAAACCAACCTCATAAATGGATTCATAAT

CGTTCAAAACAACCGAATCCTTTTGCCCGAACCTCACAGACATTATAGGTCCATACTTCTCACGTGACCACCGCATGATC

ACCTTATGCGCAGATTTACCGAGAAAGGGTAAAGCCCCCAACACGGGTATTCCCCTTACCCCAGGTGGGTACCGTGGGTG

GGGCAACTTCCACCAGTAATAATACACAAACAAAACAAGGGTAAAAAACCCGGTTAAACAGAAAGTGACGTAATTAGAGG

TCAACGACCCCAAAAATGCGGGAAGCATAATTTTGAATACTGTTG

>DEV44236.x1_4
                              TVFKIMLPAFLGSLTSNYVTFCLTGFFTLVLFVYYYWWKLPHPRYPPGVRGIPVLGALPF
                              LGKSAHKVIMRWSREKYGPIMSVRFGQKDSVVLNDYESIYEVGLGEDGITIIVG*GKTGH
                              VFVLVPFGSKQRTSK*I*IRILMIPIDCC*LFNTRSEYLGIIC*GCPVLPHPTICNKKLA
                              I*ALVKQGPAFQTRPRIKVSE
                              >DEV44236.x1_5
                              NSIQNYASRIFGVVDL*LRHFLFNRVFYPCFVCVLLLVEVAPPTVPTWGKGNTRVGGFTL
                              SR*ICA*GDHAVVT*EVWTYNVCEVRAKGFGCFERL*IHL*GWFRGRRDYDYSRVGEDGT
                              RFRSCPIWQ*TKNIQININPYSHDSHRLLLII*HTFRIFGYYLLRVSRITPSYYM*QKTC
                              HIGFGQTRPSVSDTTKD*SKRX
                              >DEV44236.x1_6
                              QQYSKLCFPHFWGR*PLITSLSV*PGFLPLFCLCIITGGSCPTHGTHLG*GEYPCWGLYP
                              FSVNLRIR*SCGGHVRSMDL*CL*GSGKRIRLF*TIMNPFMRLV*GKTGLRL*SGRGRRD
                              TFSFLSHLAVNKEHPNKYKSVFS*FP*TVVNYLTHVQNIWVLFAKGVPYYPILLYVTKNL
                              PYRLWSNKAQRFRHDQGLK*AX
This walks down 428bp 
LQW259693.x1 
LQW259693.x1.phd.1 LQW259693.y1 

           12:41:14 2001 TEMPLATE: LQW259693 DIRECTION: fwd
          Length = 991

 Score =  177 bits (410), Expect = 2e-44
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = -3

Query: 1   TVVNYLTHVQNIWVLFAKGVPYYPILLYVTKNLPYRLWSNKAQRFRHDQGLK 52
           TVVNYLTHVQNIWVLFAKGVPYYPILLYVTKNLPYRLWSNKAQRFRHDQGLK
Sbjct: 584 TVVNYLTHVQNIWVLFAKGVPYYPILLYVTKNLPYRLWSNKAQRFRHDQGLK 429

>LQW259693.x1
>lcl|LQW259693.x1 CHROMAT_FILE: LQW259693.x1 PHD_FILE:
LQW259693.x1.phd.1 CHEM: term DYE: ET TIME: Fri Aug 31 12:41:14
2001 TEMPLATE: LQW259693 DIRECTION: fwd 
GCGGCACCGATCCTCGAACGAGAGCGCGCAGTGCAGCTGNTGGGACTTCACTTTANCAATATAGAATAAAATGTGCATAT

ACTATGTAGGGCTATAATGGGCTAATTCTGGTCTAATTCACCAGTTCCATGGCATTCCTTGCTGTGGGAATTTACTTTAN

CAATATAGAATAAAATGTGCATATACTATGTTGGGCGAATTCTGGCATAAATCCCAGGTCCCATGGCATACCTTTCTGTG

GGACTTTACCAATATAAAATAAAATGTGCATATGCTATGTTGGGCTATAATAGGCTAATTCTGGTAATTCCCAGACCACT

TAAACACTCACCCACGTAATGCTTTTCCAGTAAAATGTCGAACCTGCATAAATTTCTTATGTCCCGCTGCAAAACCAAAC

CCGTAGCCATTGCTGTGGGCTTCGATTACTTTAATCCTTGGTCGTGTCTGAAACGCTGGGCCTTGTTTGACCAAAGCCTA

TATGGCAAGTTTTTTGTTACATATAGTAGGATGGGGTAATACGGGACACCCTTAGCAAATAATACCCAAATATTCTGAAC

GTGTGTTAAATAATTAACAACAGTCTATGGGAATCATGAGAATACGGATTTATATTTATTTGGATGTTCTTTGTTTACTA

CCAAATGGGACAAGAACGAAAACGTGTCCCGTCTTCACCTACCCGACTATAATCGTAATCCCGTCTTCCCCTTANCCANC

TCATAAATGGATCATAATCGTTCANACAACGAATCCCTTCCCGAACTTAAGACTTATAGTCATACTCTCAGTGACACGNA

TGATCACTATGGCAGATTACGAGAAGGTTAAGGCTAAACGGTATTCCTAACCAGTGTACGGGCTGGGCATTCACGCATAT

ACAACACACGGTAACCGGTAAGATGGTTCTAGGCGACCATGTGCAATTTTTGGCAACGCTTGAAATACCACAAATCTTAG

CGGATTTAGGAGAACATGCGGAATAGTAATG

>_4
                              ITIPHVLLNPLRFVVFQALPKIAHGRLEPSYRLPCVVYA*MPSPYTG*EYRLALTFS*SA
                              IVIXRVTESMTISLKFGKGFVV*TIMIHL*XG*GEDGITIIVG*VKTGHVFVLVPFGSKQ
                              RTSK*I*IRILMIPIDCC*LFNTRSEYLGIIC*GCPVLPHPTICNKKLAI*ALVKQGPAF
                              QTRPRIKVIEAHSNGYGFGFAAGHKKFMQVRHFTGKALRG*VFKWSGNYQN*PIIAQHSI
                              CTFYFILVKSHRKVCHGTWDLCQNSPNIVYAHFILYX*SKFPQQGMPWNW*IRPELAHYS
                              PT*YMHILFYIXKVKSXQLHCALSFEDRCR
                              >_5
                              HYYSACSPKSAKICGISSVAKNCTWSPRTILPVTVCCICVNAQPVHWLGIPFSLNLLVIC
                              HSDHXCH*EYDYKS*VREGIRCXNDYDPFMXWXRGRRDYDYSRVGEDGTRFRSCPIW**T
                              KNIQININPYSHDSHRLLLII*HTFRIFGYYLLRVSRITPSYYM*QKTCHIGFGQTRPSV
                              SDTTKD*SNRSPQQWLRVWFCSGT*EIYAGSTFYWKSITWVSV*VVWELPELAYYSPT*H
                              MHILFYIGKVPQKGMPWDLGFMPEFAQHSICTFYSILXK*IPTARNAMELVN*TRISPL*
                              PYIVYAHFILYX*SEVPXAALRALVRGSVPX
                              >_6
                              LLFRMFS*IR*DLWYFKRCQKLHMVA*NHLTGYRVLYMRECPARTLVRNTV*P*PSRNLP
                              **SXVSLRV*L*VLSSGRDSLXERL*SIYEXXKGKTGLRL*SGR*RRDTFSFLSHLVVNK
                              EHPNKYKSVFS*FP*TVVNYLTHVQNIWVLFAKGVPYYPILLYVTKNLPYRLWSNKAQRF
                              RHDQGLK*SKPTAMATGLVLQRDIRNLCRFDILLEKHYVGECLSGLGITRISLL*PNIAY
                              AHFILYW*SPTERYAMGPGIYARIRPT*YMHILFYIXKVNSHSKECHGTGELDQN*PIIA
                              LHSICTFYSILXK*SPXSCTARSRSRIGAA

>_4
                              CFPY*DEETLS*RLMVPCKLGS*DFFSGT*ELYFNTFMYPNANTFIIALKWALDLYTLLR
                              YHLKLFKLSFQEESLIVCVVDLFFAGTDTSTSTVMWAMVALLNFPEIQEKLHKEIANATG
                              VLGEFLFQFFNKFTQVKHFQVWTTGMNFHYSTLLFKNFTAT*PLDPLVFRTKPQPMRTLA
                              DTVSLKIQGYVQLHTLLSSVKHVMLMNFASGDNKHLGCALRA
                              >_5
                              MLSLLR*RNTLLKTHGSM*VRKLRFFFRYLRTLF*YLYVS*CKHLYYSIKMGP*FIYASQ
                              IPSETV*TFISGRISHRLCG*PIFCWDRYEHKHSNVGDGCPSKLSRDTRETS*RNSQCNR
                              CVG*VLIPIL*QIYSGEALPSLDHRDELPLLNAFIQELYRHMTLGPFGVPHETTTDAYIG
                              GYCIPKNTRVCTTTYSLIQC*TCHVDEFCIR**QTSGLCTTSX
                              >_6
                              DAFLIEMKKHSPEDSWFHVS*EVKIFFQVLKNFILIPLCILMQTPLL*H*NGPLIYIRFS
                              DTI*NCLNFHFRKNLSSFVWLTYFLLGQIRAQAQ*CGRWLPF*TFQRYKRNFIKK*PMQQ
                              VCWVSSYSNSLTNLLR*STSKFGPQG*TSITQRFYSRTLPPHDPWTLWCSARNHNRCVHW
                              RILYP*KYKGMYNYILSYPVLNMSC**ILHQVITNIWAVHYEL

DEV37556.y1 

           CHEM: term DYE: ET TIME: Wed Mar 21 16:13:40 2001
           TEMPLATE: DEV37556 DIRECTION: rev
          Length = 682

 Score =  246 bits (571), Expect = 1e-64
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = +1

Query: 1   ELYFNTFMYPNANTFIIALKWALDLYTLLRYHLKLFKLSFQEESLIVCVVDLFFAGTDTS 60
           ELYFNTFMYPNANTFIIALKWALDLYTLLRYHLKLFKLSFQEESLIVCVVDLFFAGTDTS
Sbjct: 463 ELYFNTFMYPNANTFIIALKWALDLYTLLRYHLKLFKLSFQEESLIVCVVDLFFAGTDTS 642

Query: 61  TSTVMWAMVALLN 73
           TSTVMWAMVALLN
Sbjct: 643 TSTVMWAMVALLN 681

>DEV37556.y1_1
                              YLRYSISYSIMCHHNNLNHNCC*DVYDAIAGYTFNNVSMFSFGDEETAKYVLAMMYFPSL
                              RHIPPFKNAWDQTLKGHFEQLGEFF*VTECLISFKRCFF*RFLSERD*RTEEDP*CK*SQ
                              RLCRCFPY*DEETLS*RLMVPCKLGS*DFFSGT*ELYFNTFMYPNANTFIIALKWALDLY
                              TLLRYHLKLFKLSFQEESLIVCVVDLFFAGTDTS
                              >DEV37556.y1_2
                              TYVTALATP*CVITIILTIIVVKMSMMLLRDTRLIMFQCLALGTKKLRSTF*L*CIFHHC
                              VIFHHLKTLGIRL*RAILNNLVSSFE*RNV**VLNAVFFKDFCRKEIEELKKTLDVNDPR
                              GYVDAFLIEMKKHSPEDSWFHVS*EVKIFFQVLKNFILIPLCILMQTPLL*H*NGPLIYI
                              RFSDTI*NCLNFHFRKNLSSFVWLTYFLLGQIR
                              >DEV37556.y1_3
                              LTLQH*LLHNVSSQ*S*P*LLLRCL*CYCGIHV**CFNV*LWGRRNCEVRSSYDVFSIIA
                              SYSTI*KRLGSDSKGPF*TTW*VLLSNGMFDKF*TLFFLKIFVGKRLKN*RRPLM*MIPE
                              VMSMLSLLR*RNTLLKTHGSM*VRKLRFFFRYLRTLF*YLYVS*CKHLYYSIKMGP*FIY
                              ASQIPSETV*TFISGRISHRLCG*PIFCWDRYE

This seq extends it back about 300 bp more
LQW243792.x1 
LQW243792.x1.phd.1 LQW243792.y1 

           12:04:53 2001 TEMPLATE: LQW243792 DIRECTION: fwd
          Length = 747

 Score =  169 bits (390), Expect = 1e-41
 Identities = 49/50 (98%), Positives = 49/50 (98%)
 Frame = +2

Query: 11  MCHHNNLNHNCC*DVYDAIAGYTFNNVSMFSFGDEETAKYVLAMMYFPSL 60
           MCHH NLNHNCC*DVYDAIAGYTFNNVSMFSFGDEETAKYVLAMMYFPSL
Sbjct: 302 MCHHKNLNHNCC*DVYDAIAGYTFNNVSMFSFGDEETAKYVLAMMYFPSL 451

>LQW243792.x1
>lcl|LQW243792.x1 CHROMAT_FILE: LQW243792.x1 PHD_FILE:
LQW243792.x1.phd.1 CHEM: term DYE: ET TIME: Mon Aug 27 12:04:53
2001 TEMPLATE: LQW243792 DIRECTION: fwd 
NGGCGCTTTGGGCAAACACCTGATATTTCACAGATGATTGTTGGAAAGACCGTTGGAAATGTTGTCGCGAGTATTGTTCT

CGGGAAAAAGTTCATCGAGACGATAAAGACTTCCAGCGTCACATTAACCTCATATTTGACAGGTAAATCATAAGCATAGC

CTATATATTAGCAATGTGTTTAATGAATGTAACTTAGTTTATGCTTGTGTGGGAGTCAACGACAGTTTGACACACTTTGT

GCTTGCTTACGTTACAGCATTAGTTACTTTACTTCTGAGTTAGATACAGGCGTTTCACTCAATGTGTCATCACAAAAATC

TTAACCATAATTGTTGTTAAGATGTCTATGATGCTATTGCGGGATACACGTTTAATAATGTTTCAATGTTTAGCTTTGGG

GACGAAGAAACTGCGAAGTACGTTCTAGCTATGATGTATTTTCCATCATTGCGTCATATTCCACCATTTAAAAACGCTTG

GGATCAGACTCTAAAGGGCCATTTTGAGCAACTTGGTGAGTTCTTTTGAGTAACCGAATGTTTGATGAGTTTTAAACGCT

GTTTTTTTCAAGATTTTTGTCGGAAAGAGATTGAAGAACTGAAGAAGCACCTTGATGTGAATGATCCCAGAGGTTATGTC

GATGCTTTCCTTATTGAGATGAAGAAACACTCTCCTGAAGACTCATGGTTCCATGCTAGTTAGGAAGTTAAGATTTTTTC

AGGTACTTAGAACTTTTTTCATACCTT

>LQW243792.x1_1
                              XRFGQTPDISQMIVGKTVGNVVASIVLGKKFIETIKTSSVTLTSYLTGKS*A*PIY*QCV
                              **M*LSLCLCGSQRQFDTLCACLRYSISYFTSELDTGVSLNVSSQKS*P*LLLRCL*CYC
                              GIHV**CFNV*LWGRRNCEVRSSYDVFSIIASYSTI*KRLGSDSKGPF*ATW*VLLSNRM
                              FDEF*TLFFSRFLSERD*RTEEAP*CE*SQRLCRCFPY*DEETLS*RLMVPC*LGS*DFF
                              RYLELFSYL
                              >LQW243792.x1_2
                              GALGKHLIFHR*LLERPLEMLSRVLFSGKSSSRR*RLPASH*PHI*QVNHKHSLYISNVF
                              NECNLVYACVGVNDSLTHFVLAYVTALVTLLLS*IQAFHSMCHHKNLNHNCC*DVYDAIA
                              GYTFNNVSMFSFGDEETAKYVLAMMYFPSLRHIPPFKNAWDQTLKGHFEQLGEFF*VTEC
                              LMSFKRCFFQDFCRKEIEELKKHLDVNDPRGYVDAFLIEMKKHSPEDSWFHAS*EVKIFS
                              GT*NFFHT
                              >LQW243792.x1_3
                              ALWANT*YFTDDCWKDRWKCCREYCSREKVHRDDKDFQRHINLIFDR*IISIAYILAMCL
                              MNVT*FMLVWESTTV*HTLCLLTLQH*LLYF*VRYRRFTQCVITKILTIIVVKMSMMLLR
                              DTRLIMFQCLALGTKKLRSTF*L*CIFHHCVIFHHLKTLGIRL*RAILSNLVSSFE*PNV
                              **VLNAVFFKIFVGKRLKN*RSTLM*MIPEVMSMLSLLR*RNTLLKTHGSMLVRKLRFFQ
                              VLRTFFIP


>chromat_dir/hrs/G126P60609F.T0/G126P60609FE9.T0.scf
            Length = 755

  Minus Strand HSPs:

 Score = 172 (60.5 bits), Expect = 7.4e-13, P = 7.4e-13
 Identities = 31/44 (70%), Positives = 36/44 (81%), Frame = -1

Query:     6 FFKDFCRKEIEELKKTLDVNDPRGYVDAFLIEMKKHSPEDSWFH 49
             FF DF RKEIEE +K LD N+P  ++DAFLIEMKKHSP+ SWFH
Sbjct:   275 FFPDFNRKEIEEHEKNLDENEPADFIDAFLIEMKKHSPDTSWFH 144

>chromat_dir/hrs/G126P60609F.T0/G126P60609FE9.T0.scf
AGCATTGGCGTACTGAATCCATCGTCCTGTGGTGGAATCTTTAAAAGTAT
TTTACCGTGGTATAACCGATGAGCATATACTAGTTCTTAGAATGTACAGC
TTTTTTGTATTATGTTAAGTATTATGTTAGCATAATCGCTTACATGAAAC
CAGGAAGTGTCGGGCGAATGTTTCTTCATCTCAATAAGAAAAGCATCGAT
GAAATCTGCTGGTTCGTTTTCGTCCAGATTCTTTTCGTGCTCTTCGATCT
CCTTGCGATTAAAATCTGGAAAAAACGAAAAAATATTTTTAAATGCTATA
ACTTGAAGAAAATATGGAGCCAATTGTTTGAAATATAGTACAGTCCTACC
TAGACTGATTAGCTTGATGGGTCATTGAACGGCTTATCCACCCAATGGTA
TAGATTGGAAACTGGTCGCTATAGCTTGTAGGTTGTGTGATGGGCAAGGC
ATTGAGCGCACATCGCCAACGAATGGGCTCTACTACAATTTAAGGAATGA
CTTAATCATCTCCAGCAACCCGACGGTGAGTGTAAGGTAATCTGACGATT
GCACGTATGATAACACCCTTTGCACTTTCCCATTCACCGGGATAAACATG
AATATCCTATGAGCTTATAAGATGCATCGTATCCTTAGTATCTAAATTAA
AGAGTTCGATTTTTTTGATTCGCCACTTTTTTCCTAACTATTTAAAACAT
GCCTAACCGTAACTCCTGTGTACAAGCATAAAATTGTCCAACCTATAAGC
CCTTG

>chromat_dir/hrs/G126P60609F.T0/G126P60609FE9.T0.scf_4
                              RAYRLDNFMLVHRSYG*ACFK*LGKKWRIKKIELFNLDTKDTMHLISS*DIHVYPGEWES
                              AKGVIIRAIVRLPYTHRRVAGDD*VIP*IVVEPIRWRCALNALPITQPTSYSDQFPIYTI
                              GWISRSMTHQANQSR*DCTIFQTIGSIFSSSYSI*KYFFVFSRF*SQGDRRARKESGRKR
                              TSRFHRCFSY*DEETFARHFLVSCKRLC*HNT*HNTKKLYILRTSICSSVIPR*NTFKDS
                              TTGRWIQYANA
                              >chromat_dir/hrs/G126P60609F.T0/G126P60609FE9.T0.scf_5
                              KGL*VGQFYACTQELRLGMF*IVRKKVANQKNRTL*FRY*GYDASYKLIGYSCLSR*MGK
                              CKGCYHTCNRQITLHSPSGCWR*LSHSLNCSRAHSLAMCAQCLAHHTTYKL*RPVSNLYH
                              WVDKPFNDPSS*SV*VGLYYISNNWLHIFFKL*HLKIFFRFFQILIARRSKSTKRIWTKT
                              NQQISSMLFLLR*RNIRPTLPGFM*AIMLT*YLT*YKKAVHSKN*YMLIGYTTVKYF*RF
                              HHRTMDSVRQCX
                              >chromat_dir/hrs/G126P60609F.T0/G126P60609FE9.T0.scf_6
                              QGLIGWTILCLYTGVTVRHVLNS*EKSGESKKSNSLI*ILRIRCIL*AHRIFMFIPVNGK
                              VQRVLSYVQSSDYLTLTVGLLEMIKSFLKL**SPFVGDVRSMPCPSHNLQAIATSFQSIP
                              LGG*AVQ*PIKLISLGRTVLYFKQLAPYFLQVIAFKNIFSFFPDFNRKEIEEHEKNLDEN
                              EPADFIDAFLIEMKKHSPDTSWFHVSDYANIILNIIQKSCTF*ELVYAHRLYHGKILLKI
                              PPQDDGFSTPML

>SEQUENCE 74, 39 60  
SVQDIVGFFSDLFIAGTETLSSQLRWGFLIMMLNPECQENVRNEIHAVIG (1)
NGRARLSDRYRMPYTCAVIQEIFRFRTLGALSLPRTNVVDVEIEGCKIPKGSK
VILNTWAIHNDERNWENPQKFIPERHLDKDGNFINSKKVLPFSVGVRSCLGE
QLARAEIFLFFVATLQQFE 
LKFDPNAQVPSLDDASNGVIFSPNPYTMIAERINEDRSNNNNNSKVI*

LQW105435.x1 
LQW186247.y1 
LQW256880.x1 
GCiWno748_p03.b1
GCiWno1016_m15.g1
GCiWno563_p14.b1

>GCiWno563_p14.b1_1
WDGYF*HIISHIS*LCF*QVTALF*SSQDALI*FCEFFCLLRIERYKRMKTSTLYNSVKF
I*KPRNLQVILNTWAIHNDERNWENPQKFIPERHLDKDGNFINSKKVLPFSVGVRSCLGE
QLARAEIFLFFVATLQQFGKMGHL*HITSKYPDRVLNN*QRSVEVLRIRFYNSLNVLCLL
PNGTRK*NEKVSHLPHPTIP*IFVYII**NIHV*VTLL*TYK*HIIIIQKCFPQRKPLPF
VLFKCI*TLPIPCSHISN*KLACXHLEVTF*AVLIKIGSGFHFLRKX
>GCiWno563_p14.b1_2
GMDTFST*YPIFPNCAFNRSLRFFRVVRMR*YNFVNFFVYYESNGIRE*KRRLYTTV*NL
YRNLVICRLF*TLGQSIMMKEIGRILRNSSQSDTWTKMEILSIRKRFCRLVLGFVHVSVN
NLPAQKSFFSLSPLYNSLERWDTFST*HQNILIVF*TINNGLWKS*GYGFIIL*MFFVYY
QMGRENRMKRCPIFPTLLYHEFSFI*SDEIFMCK*HYYELINNILL*FRSVFPSENLYLL
FCLNVYKPYPSHAVI*AIRSSRVXIWK*RFKLC*LKSEVAFIFCVN
>GCiWno563_p14.b1_3
GWILLAHNIPYFLTVLLTGHCAFLE*SGCVDIIL*IFLFTTNRTV*ENENVDFIQQCKIY
IETS*FAGYFKHLGNP***KKLGESSEIHPRATLGQRWKFYQFEKGFAV*CWGSFMSR*T
TCPRRNLSFLCRHFTTVWKDGTPLAHNIKIS*SCFKQLTTVCGSPEDTVL*FFKCSLFTT
KWDEKIE*KGVPSSPPYYTMNFRLYNLMKYSCVSDIIMNL*ITYYYNSEVFSPAKTSTFC
FV*MYINPTHPMQSYKQLEARVXSFGSDVLSCVN*NRKWLSFFA*

>GCiWno748_p03.b1_4
YL*LTERPF*PIDTGRDSLSKTLXAVVPPPFVGIHKRTLGV*NRPPCLYCRFPANQGXSK
LYSFIYKSLFRILSDSSPICSSLVQKPFLPNYDGVSLS*CLTRNAKKMLGMKYTLS*VIL
SFFLTYKKQDTQHVI*VMLLFGPPCKDKEVTLI**KTYFIHNLCYNGG*LPPREVK*VLL
IRYPILYTGGN GRARLSDRYRMPYTCAVIQEIFRFRTLGALSLPRTNVVDVEIEGCKIPK
GSKVMVVLLSVCSRVGENGTPFQFIFSSHLVVNKEHSKSYKTVFSRLQ*NV
>GCiWno748_p03.b1_5
LFVTDRAPILAHRHRSRLLEQDVXGSCPTPLCWYS*ANTRCLKQTTVFILSFSR*SRRXQ
VIFLHL*VSVQDIVGFFSDLFIAGTETLSSQLRWGFLIMMLNPECQENVRNEIHAVIGNS
IVFSYI*KTGHSACYISYAVIWPAMQG*RSNINLMKNLFYTQLVL*WWLIAATRG*ISSI
DSIPDSIHRRKWKSAAFRSLPYALHMRGDSRNISFPNVGSFESSTNECC*R*D*RM*DSE
RLEGNGCFIKCMQ*GGGKWDTFSVYFLVPFGSKQGTFKEL*NRILTAPIERX
>GCiWno748_p03.b1_6
ICD*QSAHSSP*TQVETP*ARRXRQLSHPPLLVFISEH*VFETDHRVYTVVFPLIKEXAS
YIPSFISLCSGYCRILLRFVHRWYRNPFFPTTMGFPYHDA*PGMPRKC*E*NTRCHR*FY
RFFLHIKNRTLSMLYKLCCYLARHARIKK*H*FNEKPILYTTCVIMVVNCRHARLNKFY*
FDTRFYTQEEMEERGFQIATVCLTHAR*FKKYFVSERWEL*VFHERMLLTLRLKDVRFRK
ARR*WLFY*VYAVGWGKMGHLFSLFSRPIW**TRNIQRVIKPYSHGSNRTX

>GCiWno748_p03.b1
AACGTTCTATTGGAGCCGTGAGAATACGGTTTTATAACTCTTTGAATGTTCCTTGTTTACTACCAAATGGGACGAGAAAA
TAAACTGAAAAGGTGTCCCATTTTCCCCCACCCTACTGCATACACTTAATAAAACAACCATTACCTTCGAGCCTTTCGGA
ATCTTACATCCTTCAATCTCAACGTCAACAACATTCGTTCGTGGAAGACTCAAAGCTCCCAACGTTCGGAAACGAAATAT
TTCTTGAATCACCGCGCATGTGTAAGGCATACGGTAGCGATCTGAAAGCCGCGCTCTTCCATTTCCTCCTGTGTATAGAA
TCGGGTATCGAATCAATAGAACTTATTTAACCTCGCGTGGCGGCAATTAACCACCATTATAACACAAGTTGTGTATAAAA
TAGGTTTTTCATTAAATTAATGTTACTTCTTTATCCTTGCATGGCGGGCCAAATAACAGCATAACTTATATAACATGCTG
AGTGTCCTGTTTTTTATATGTAAGAAAAAACGATAGAATTACCTATGACAGCGTGTATTTCATTCCTAACATTTTCTTGG
CATTCCGGGTTAAGCATCATGATAAGGAAACCCCATCGTAGTTGGGAAGAAAGGGTTTCTGTACCAGCGATGAACAAATC
GGAGAAGAATCCGACAATATCCTGAACAGAGACTTATAAATGAAGGAATATAACTTGCTNTCTCCTTGATTAGCGGGAAA
ACGACAGTATAAACACGGTGGTCTGTTTCAAACACCTAGTGTTCGCTTATGAATACCAACAAAGGGGGGTGGGACAACTG
CCGNTAACGTCTTGCTCAAGGAGTCTCGACCTGTGTCTATGGGCTAGAATGGGCGCTCTGTCAGTCACAAATAA

sequence 39, 60 2 accessions 52% to 2R1 probably = seq 39
VILNTWAIHNDERNWENPQKFLPERHLDKQGNF
INSKKVLPFSVGVRSCLGEQLARAEIFLFFVATLQQFE
LKFDPNAQVPSLDDASNGVIFSPNPYTMIAERINEDRSNNNNNSKVI*
LQW167430.x1                   
DEV14425.y1  
GCiWno563_p14.b1
LQW263277.y1 
rcilv084c12

>rcilv084c12
ATATGAAAGCGTTATGCGAAGGCGTATTTTAACTGTGCAGAAATTTGCAGCATTACAGTTCTACAAGATATCACGTTATT
AAAAACACACACTCTGTCTAGCGTTGTGCTGGCTTACATTTTATATGATTTACACCTTAATAAAAAAATTCAGGATTCTT
TGCTCAATACTGCCACCTTTTATGCTGGACATATAGGTCATCAGGCAGACTAGAAAAGTAATATTTGATCCTCACAAACC
AACTAATTCTAATATAAAATAAACATGTCTACACAAACCAGCATGTATATAAAATCACGTCTAAGTTAGATGACTTTAGA
ATTGTTATTATTGTTACTCCTATCTTCGTTTATGCGTTCGGCAATCATAGTATAAGGATTCGGGGAAAATATAACACCGT
TGGATGCATCATCTAAGCTGGGGACTTGAGCGTTCGGATCAAATTTGAGCTCAAACTGTTGTAAAGTGGCGACAAAGAAA
AAAAAGATTTCTGCTCGGGCAAGTTGTTCACCGAGACATGAACGAACCCCAACACTAAACGGCAAAACCTTTTTCGAATT
GATAAAATTTCCATCTTTGTCCAAGTGTCGCTCTGGGATGAATTTCTGAGGATTCTCCCAATTTCTTTCATCATTATGAA
TTGCCCAAGTGTTTAAAAT


>GCiWno563_p14.b1
TGGGATGGATACTTTTAGCACATAATATCCCATATTTCCTAACTGTGCTTTTAACAGGTCACTGCGCTTTTTTAGAGTAG
TCAGGATGCGTTGATATAATTTTGTGAATTTTTTTGTTTACTACGAATCGAACGGTATAAGAGAATGAAAACGTCGACTT
TATACAACAGTGTAAAATTTATATAGAAACCTCGTAATTTGCAGGTTATTTTAAACACTTGGGCAATCCATAATGATGAA
AGAAATTGGGAGAATCCTCAGAAATTCATCCCAGAGCGACACTTGGACAAAGATGGAAATTTTATCAATTCGAAAAAGGT
TTTGCCGTTTAGTGTTGGGGTTCGTTCATGTCTCGGTGAACAACTTGCCCGCGCAGAAATCTTTCTTTTCTTTGTCGCCA
CTTTACAACAGTTTGGAAAGATGGGACACCTTTAGCACATAACATCAAAATATCCTGATCGTGTTTTAAACAATTAACAA
CGGTCTGTGGAAGTCCTGAGGATACGGTTTTATAATTCTTTAAATGTTCTTTGTTTACTACCAAATGGGACGAGAAAATA
GAATGAAAAGGTGTCCCATCTTCCCCACCCTACTATACCATGAATTTTCGTTTATATAATCTGATGAAATATTCATGTGT
AAGTGACATTATTATGAACTTATAAATAACATATTATTATAATTCAGAAGTGTTTTCCCCAGCGAAAACCTCTACCTTTT
GTTTTGTTTAAATGTATATAAACCCTACCCATCCCATGCAGTCATATAAGCAATTAGAAGCTCGCGTGTTNTCATTTGGA
AGTGACGTTTTAAGCTGTGTTAATTAAAATCGGAAGTGGCTTTCATTTTTTGCGTAAAC

>_1
WDGYF*HIISHIS*LCF*QVTALF*SSQDALI*FCEFFCLLRIERYKRMKTSTLYNSVKF
I*KPRNLQVILNTWAIHNDERNWENPQKFIPERHLDKDGNFINSKKVLPFSVGVRSCLGE
QLARAEIFLFFVATLQQFGKMGHL*HITSKYPDRVLNN*QRSVEVLRIRFYNSLNVLCLL
PNGTRK*NEKVSHLPHPTIP*IFVYII**NIHV*VTLL*TYK*HIIIIQKCFPQRKPLPF
VLFKCI*TLPIPCSHISN*KLACXHLEVTF*AVLIKIGSGFHFLRKX
>_2
GMDTFST*YPIFPNCAFNRSLRFFRVVRMR*YNFVNFFVYYESNGIRE*KRRLYTTV*NL
YRNLVICRLF*TLGQSIMMKEIGRILRNSSQSDTWTKMEILSIRKRFCRLVLGFVHVSVN
NLPAQKSFFSLSPLYNSLERWDTFST*HQNILIVF*TINNGLWKS*GYGFIIL*MFFVYY
QMGRENRMKRCPIFPTLLYHEFSFI*SDEIFMCK*HYYELINNILL*FRSVFPSENLYLL
FCLNVYKPYPSHAVI*AIRSSRVXIWK*RFKLC*LKSEVAFIFCVN
>_3
GWILLAHNIPYFLTVLLTGHCAFLE*SGCVDIIL*IFLFTTNRTV*ENENVDFIQQCKIY
IETS*FAGYFKHLGNP***KKLGESSEIHPRATLGQRWKFYQFEKGFAV*CWGSFMSR*T
TCPRRNLSFLCRHFTTVWKDGTPLAHNIKIS*SCFKQLTTVCGSPEDTVL*FFKCSLFTT
KWDEKIE*KGVPSSPPYYTMNFRLYNLMKYSCVSDIIMNL*ITYYYNSEVFSPAKTSTFC
FV*MYINPTHPMQSYKQLEARVXSFGSDVLSCVN*NRKWLSFFA*

>rcilv084c12 
          Length = 659

 Score =  155 bits (389), Expect = 7e-38
 Identities = 72/100 (72%), Positives = 85/100 (85%)
 Frame = -1

Query: 18  ILNTWAIHNDERNWENPQKFLPERHLDKQGNFINSKKVLPFSVGVRSCLGEQLARAEIFL 77
           ILNTWAIHNDERNWENPQKF+PERHLDK GNFINSKKVLPFSVGVRSCLGEQLARAEIF 
Sbjct: 659 ILNTWAIHNDERNWENPQKFIPERHLDKDGNFINSKKVLPFSVGVRSCLGEQLARAEIFF 480

Query: 78  FFVATLQQFEILPDPGSKDLPPINEGGNSILHLPIHFKVV 117
           FFVATLQQFE+  DP ++ +P +++  N ++  P  + ++
Sbjct: 479 FFVATLQQFELKFDPNAQ-VPSLDDASNGVIFSPNPYTMI 363



>sequence 62, 83 8 accessions 42% to 2U1
MLPIICLSLFLIIFLCWKPLRKRSNYPPGCDGMPFLGCLPLLGVHPANTIMKWSKRYGDV 580
FYVKYAMQNVIMLNSFESIKEALVKQGHVFSG 676

EQLFHYVKELFLAGTDTTATTLRWAILLIHYHTDVHEKIHEEIDREASNPVKFEDMPN
MPYTQAVIQEVFRSRPIANFGTMRKTTAVGKVGGYRIPKGSIVMPNIWAVHHNPQR
WKDPHLFKPDRHIDQNGKFVKSEDIIPFNVGQRSCLGMQLAKMEIFIFLVRMMQRFNFK
LATDKEKLDLNGQYIFLHYPPAFDVSVQLRS*
DEV2193.y1    
DEV2193.x1 
LQW184127.y1  
LQW184127.x1 
LQW183756.y1  
LQW52515.y1
DEV54251.x1  I-helix
LQW223519.x1 HEME
LQW131549.x1 

>sequence 64 1 accession 39% to 2J2
EESLILCVIDLFFGGTETSTSTVMWAMVVLINFPQIQEKLHKEIVTAT (1)
GEALPNLDHRNELPLFQAFIQELYRCMTLAPLGVQHQTTKDADIGGYCIPKDTV 
VLTNIHAVHHDPKIWKNPSEFNIYRHIDQDGKFIPSRKMIPFGIGCRSCLG 687
688 EKLARSEVFLLLANIIKRFEILPDPESKELPDYKDGINGFLYVPYDYKLVDKPRTVNI*
LQW235454.x1 
GCiWno478_k09.b1

GCiWno478_k09.b1_4
KHLSFFV*LTCFLVEPKQAQAQ*CGRWLSLSTFHRYKRNFIKR*SMQQVH*VHSYFISLT
NLFR*STSKLGPQE*TSTFPSFYSRTLPMYDTCTTGCSTPNHKGCGYWRILYPKRYSGKC
NLFQALLLSTNLILGVNKHSCCPPRSQNLEEPERV*YLSSHRPRREIHSFEKNDPVWNRM
QILSW*EVGKE*SLPTPCQHXQEVRDPS*SREQGASRL*RWHQRIFICSL*L*TC**TEN
R*YIIIRR*KRYI*RLPKRPIYTHLYSYPYFNSLT
>GCiWno478_k09.b1_5
EASLILCVIDLFFGGTETSTSTVMWAMVVLINFPQIQEKLHKEIVNATGALSAFLFHIFN
QLI*VKHFQTWTTGMNFHFSKLLFKNFTDV*HLHHWVFNTKPQRMRILADTVSQKIQW*V
*LIPGTSFVNEFNTRC*QTFMLSTTIPKSGRTRASLIFIVTSTKTGNSFLREK*SRLESD
ADPVLVRSWQGVKSSYSLPTXSRGSRSFLIQRARSFPTIKMASTDFYMFPMTINLLINRE
PLIYNNKTLKTLHLTSAKTSYIYSPIFLSLF**PHX
>GCiWno478_k09.b1_6
SISHSLCD*LVFWWNRNKHKHSNVGDGCPYQLSTDTRETS*RDSQCNRCIKCILISYL*P
TYLGEALPNLDHRNELPLFQAFIQELYRCMTLAPLGVQHQTTKDADIGGYCIPKDTVVSV
TYSRHFFCQRI*Y*VLTNIHAVHHDPKIWKNPSEFNIYRHIDQDGKFIPSRKMIPFGIGC
RSCLGEKLARSEVFLLLANXIKRFEILPDPESKELPDYKDGINGFLYVPYDYKLVDKPRT
VNI***DVENATFDVCQNVLYILTYIPIPILIASL

>GCiWno478_k09.b1
AGTGAGGCTATTAAAATAGGGATAGGAATATAGGTGAGTATATATAGGACGTTTTGGCAGACGTCAAATGTAGCGTTTTC
AACGTCTTATTATTATATATTAACGGTTCTCGGTTTATCAACAAGTTTATAGTCATAGGGAACATATAAAAATCCGTTGA
TGCCATCTTTATAGTCGGGAAGCTCCTTGCTCTCTGGATCAGGAAGGATCTCGAACCTCTTGATNATGTTGGCAAGGAGT
AGGAAGACTTCACTCCTTGCCAACTTCTCACCAAGACAGGATCTGCATCCGATTCCAAACGGGATCATTTTTCTCGAAGG
AATGAATTTCCCGTCTTGGTCGATGTGACGATAAATATTAAACTCGCTCGGGTTCTTCCAGATTTTGGGATCGTGGTGGA
CAGCATGAATGTTTGTTAACACCTAGTATTAAATTCGTTGACAAAAGAAGTGCCTGGAATAAGTTACACTTACCACTGTA
TCTTTTGGGATACAGTATCCGCCAATATCCGCATCCTTTGTGGTTTGGTGTTGAACACCCAGTGGTGCAAGTGTCATACA
TCGGTAAAGTTCTTGAATAAAAGCTTGGAAAAGTGGAAGTTCATTCCTGTGGTCCAAGTTTGGAAGTGCTTCACCTAAAT
AAGTTGGTTAAAGATATGAAATAAGAATGCACTTAATGCACCTGTTGCATTGACTATCTCTTTATGAAGTTTCTCTTGTA
TCTGTGGAAAGTTGATAAGGACAACCATCGCCCACATTACTGTGCTTGTGCTTGTTTCGGTTCCACCAAAAAACAAGTCA
ATCACACAAAGAATGAGAGATGCTTC

>scf/ciona01/G126/seq_dir/hrs/G126P64700R.T0/G126P64700RH12.T0.seq    727
            0    727  ABI
            Length = 727

  Minus Strand HSPs:

 Score = 268 (94.3 bits), Expect = 5.2e-23, P = 5.2e-23
 Identities = 46/59 (77%), Positives = 52/59 (88%), Frame = -3

Query:     1 PPGPRGLPFIGPITSIRIHPEHAMMKWNQQYGPVCMVRFGFKDILLLGSYEAAHEALVK 59
             PPGPRG+P +G IT +  HPEHAMMKWNQQYGP+CMVR G KD+LLLGSYEAAHEAL+K
Sbjct:   221 PPGPRGIPLLGAITQLGKHPEHAMMKWNQQYGPICMVRLGHKDVLLLGSYEAAHEALLK 45

>sequence 66, 75 1 accession 41% to 1A1 33% to 2C9 63% to seq 57 
MFESFGYYFGESLTSNHVISGLIGVFTIVMCVYYYWWKFPHPRYPPGVRGVPIFGAIP
FFGRYVQETLAKWSRSKYGPVMSARFGQDDAVVLNDFESIHE (0?)
ALVKNIQHFNSRPSFYIVEQFTHGYGFGFADGHNKYLDVRNFSLSALRG (?)
LGIGRRTMETRVSEVAQDLVKILEDLDQKPTDLK (0?)
MMLGGTVANVLCSVVFGKTYDLSDPEYQYAVQCSFDC (2)
FGDPENSEYLNFMFFYPKLRYIQPFKRALKKFIDVHLGLIAFNQKEINLHKERLDVN
EPGDYIDAFLIEMKKHSPENSWFHETQLLHCLGDMFIAGTETTTNTILWALLALIHHPEI
QEKLYQELLDNIGEQVLPSTDHRDKIPLFRAFTQEVYRFKTIVPLALQHRANKDVEIGGY
VIPKGTKVFPNLHAVHHDPNIWKNPSEFNIYRHISKDGKFIPSKRVVAFGMGARSCLGEKLAITE
VFLFLANIIKRFEILPDPESKELPILKDGVNSLLYVPYRFKVVVKPRIINE*
LQW259643.y1 
GCiWno768_b20.b1
GCiWno778_a23.b1
cits031a18 
GCiWno57_n14.b1
LQW110746.y01 NEW
LQW281021.y1

>GCiWno57_n14.b1
TTCGGGTCATAGACTGTTTGCCAGTAAAACGTACGGCACGATCATGGTTCATATCTGTGTCCAGTTAAACGACCGCCGTG
CATGGTAACTCTGCTGTACCAGTTGCGCCTGTTACTTGGCCGTAAGTAAAACCTGGTTGTCGGCAGTTACAAGTAAAACC
TGGTTGTCGGCACTACAGAGATTTGCGCTAATTACTACAGTAGGGAGATGTTCACGTGCGAAGATATTACTTTTACTACT
TCTAATCGAGCAAGTCATCCTGATGACATTTCAAACTATATGTCTAACGTTTCAAAGCTGACCGCGGTAAAACTTAAATA
GAAAGAGTTGATCATGCAAAAGCAATAGCTTTATAGAACCGACCATGTTATTAACAAAAACAGTTGAATCTGGAAACACT
GGATTGAACTCAGCCTGGTCAGACCGAACAGCAGGTTCTGGAGTTCCGTTGCAGTATTCAATTACCAGTGTTGTACGTCT
GGAATATGTTTTTAAAAGTGCGAAATTTTAAACTTGTGTTATCTTCCAGACAATATGTTTGAAAGTTTTGGTTATTATTT
TGGTGAGTCGTTGACTTCGAATCATGTTATTTCCGGTTTAATCGGGGTTTTCACCATTGTTATGTGCGTGTATTATTACT
GGTGGAAGTTTCCCCACCCACGGTACCCACCTGGGGTAAGAGGGGTTCCAATTTTTGGTGCTATCCCATTTTTTGGAAAG
TACGTTCAAGAAACTTTGGCAAAGTGGTCACGTAGCAAGTATGGTCCAGTCATGTCTGCACGATTTGGTCAAGATGACGC
TGNTGTGTTGAACGATTTTGAATCAATACACGAAGTAATCGACCTATTGATTAACAACTTTATAACTTTATTATCGATTG
GTCTTGTACAGACCATGGTGTACCTAAGGATTTCACCTCACATTTTTAGGATCTN

cits031a18 
          Length = 643

 Score =  107 bits (265), Expect = 1e-23
 Identities = 49/50 (98%), Positives = 50/50 (100%)
 Frame = +2

Query: 2   QALVKNIQHFNSRPSFYIVEQFTHGYGFGFADGHNKYLDVRNFSLSALRG 51
           +ALVKNIQHFNSRPSFYIVEQFTHGYGFGFADGHNKYLDVRNFSLSALRG
Sbjct: 308 EALVKNIQHFNSRPSFYIVEQFTHGYGFGFADGHNKYLDVRNFSLSALRG 457

>cits031a18 used related seq to get N-term part of this EST
          Length = 643

 Score =  233 bits (587), Expect = 7e-61
 Identities = 101/132 (76%), Positives = 116/132 (87%)
 Frame = +2

Query: 10  ITSCLTGVCTLVLFVYYYWWKLPHPRYPPGVRGIPVLGALPFLGKFAHKDIMRWSREKYG 69
           + S L GV T+V+ VYYYWWK PHPRYPPGVRG+P+ GA+PF G++  + + +WSR KYG
Sbjct: 62  VISGLIGVFTIVMCVYYYWWKFPHPRYPPGVRGVPIFGAIPFFGRYVQETLAKWSRSKYG 241

Query: 70  PIMSVRFGQKDSVVLNDYESIFQALVKNIQHFNSRPSFYIVEQFTHGYGFGFADGHNKYL 129
           P+MS RFGQ D+VVLND+ESI +ALVKNIQHFNSRPSFYIVEQFTHGYGFGFADGHNKYL
Sbjct: 242 PVMSARFGQDDAVVLNDFESIHEALVKNIQHFNSRPSFYIVEQFTHGYGFGFADGHNKYL 421

Query: 130 DVRNFSLSALRG 141
           DVRNFSLSALRG
Sbjct: 422 DVRNFSLSALRG 457


Related seq to help find N-term
>cicl015b02 
          Length = 305

 Score = 42.6 bits (98), Expect = 3e-04
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = +3

Query: 1   GRRTMETRVSEVAQDLVKILEDLDQKPTDLK 31
           G R ME RVSEVAQDLV+ L++LD KPT+ +
Sbjct: 111 GGRVMEERVSEVAQDLVQSLQELDGKPTNFR 203

>cicl015b02
AATTGATAAATTCTTACTCCAATGGTTACGGGTTTGGTTTTGCTGAAGGAAACAAGAAATACATGGAGGTTCGACATTTT
ACACTAAAGGCATTACGTGGGTTTGGGATTGGAGGTCGTGTAATGGAGGAGCGAGTGTCAGAGGTTGCGCAAGATCTTGT
TCAATCTCTTCAAGAATTGGATGGAAAACCAACAAACTTTAGGATGATTGTCGGAACAACAGTTTCAAACGTAATCGCGA
GCATCGNCCTCGGGAAGAAGNTTCATCCAAAAGACGAAGACTTTCAACGCCATGNACAACTAATC

>_3
LINSYSNGYGFGFAEGNKKYMEVRHFTLKALRGFGIGGRVMEERVSEVAQDLVQSLQELD
GKPTNFRMIVGTTVSNVIASIXLGKKXHPKDEDFQRHXQLI

Another related seq 
>cibd042f04 
          Length = 702

 Score =  116 bits (288), Expect = 3e-26
 Identities = 54/95 (56%), Positives = 71/95 (73%)
 Frame = +3

Query: 1   LINSYSNGYGFGFAEGNKKYMEVRHFTLKALRGLGIGRRTMETRVSEVAQDLVKILEDLD 60
           LI SYSNGYGFGFAEG+ KYME+RHFT K LRG GIG R +E R+S+ AQ+LV+  + LD
Sbjct: 327 LITSYSNGYGFGFAEGHTKYMELRHFTFKILRGFGIGGRYLEDRISDHAQELVQDFKKLD 506

Query: 61  QKPTDLKMMLGGTVANVLCSVVFGKTYDLSDPEYQ 95
            K TD++M++  T+ NV+ S+V GK Y   D ++Q
Sbjct: 507 GKATDVRMIVATTIGNVIASIVLGKKYHPKDKDFQ 611
>rcibd042f04
CGATAATAATATACCACATATGTTGCTAAATAGGGTAAGTGAGGCTATTAAAATAGGGATAGGAATATAGGTGAGTATAT
ATAGGACGTTTTGGCAGACGTCAAATGTAGCGTTTTCAACGTCTTAGTATTATATATTAACGGTTCTCGGTTTAGCAACA
AGTTTATAGTCATAGGGAACATATAAAAATCCGTTGATGCCATCTTTATAGTCGGGAAGCTCCTTGCTCTCTGGATCAGG
AAGGATCTCGAACCTCNTGGATGATGTTGGCAAGGAGTAGGAAGACTTCACTCCTTGCCAACTTCTCACCAAGACAGGAT
CTGCATCCGATTCCAAACGGGATCATTTTTCTCGAAGGAATGAATTTCCCGTCTTGGTCGATGTGACGATAAATATTAAA
CTCGCTCGGGTTCTTCCAGATTTTGGGATCGTGGTGGACAGCATGAATGTTTGTTAACACCACTGTATCTTTTGGGATAC
AGTATCCGCCAATATCCGCATCCTTTGTGGTTTGGTGTTGAACACCCAGTGGTGCAAGTGTCATACATCGGTAAAGTTCT
TGAATAAAAGCTTGGAAAAGTGGAAGTTCATTCCTGTGGTCCAAGTTTGGAAGTGCTTCACCTGTTGCATTGACTATCTC
TTTATGAAGTTTCTCTTGTATCTGNGGAAAGTTGATAAGGACNACCATCNCCCACATTACTGNGCTT
>cibd042f04
TATTTTTTGAGTCGTTTACCTCTAATTACATCACATCCTGCTTAACCGGGGTTTGTACCCTTGTTTTGTTCGTGTATTAC
TACTGGTGGAAATTGCCCCACCCACGGTACCCACCTGGGGTGAGGGGAATACCCGTGTTGGGGGCTTTACCCTTTCTCGG
TAAATTTGCGCACAAAGACATCATGCGGTGGTCACGTGAGAAGTATGGACCTATAATGTCTGTGAGGTTCGGGCAAAAGG
ATTCGGTTGTTTTGAACGATTATGAATCTATTTACGAGGCTATGGTCAAACAAGGTCCAGCATTTCGGTCACGTCCAACC
ATGAAACTGATTACCTCTTACTCGAATGGCTACGGGTTTGGTTTTGCTGAGGGACACACCAAATACATGGAACTCCGACA
TTTTACATTCAAGATATTACGTGGGTTTGGAATTGGTGGTCGATATTTGGAGGACCGCATCTCAGATCATGCGCAAGAAC
TTGTTCAAGATTTTAAAAAATTAGATGGAAAAGCAACTGACGTGAGGATGATAGTTGCAACCACCATTGGAAATGTTATC
GCGAGTATTGTTCTTGGAAAGAAATATCATCCAAAAGATAAAGATTTCCAACGTCATCTCCAGCTAATACTTAACAATTT
TGGAAACGAAGAAACTGCAAGCTATATTCTATGTATGATGTATTTTCCATCATTGCGTCATA

>cibd042f04_3 = seq 57
                              FFESFTSNYITSCLTGVCTLVLFVYYYWWKLPHPRYPPGVRGIPVLGALPFLGKFAHKDI
                              MRWSREKYGPIMSVRFGQKDSVVLNDYESI YEAMVKQGPAFRSRPTMKLITSYSNGYGFG
                              FAEGHTKYMELRHFTFKILRGFGIGGRYLEDRISDHAQELVQDFKKLDGKATDVRMIVAT
                              TIGNVIASIVLGKKYHPKDKDFQRHLQLILNNFGNEETASYILCMMYFPSLRH

>GCiWno778_a23.b1
TCAGGGCTCGTTTAAAAGGTTGTATGTATCTCAGCTTCGGGTAGAAGAACATGAAGTTTAAATATTCTGAATTCTCTGGG
TCTCCAAAGCTAAAAGATATTGGAAACAGATAAAGAAAGCAGAAAAACAATACCTATGTTAGAAGATCACTCATGATCGA
AATTCGCTGAAAAAAGATCTCCCATCGCGATAATGCGGGTGCGTGAACCGCAATGTTTTCGGTATTCGAACTTTGATTGA
TAGGGTATATCTGTTCAGTCACGGTATTTGCAAACTAGAACTTACCAGTCGAAACTGCATTGTACTGCATATTGATACTC
AGGGTCACTTAGATCGTAAGTCTTTCCAAAAACTACGCTGCAGAGAACGTTTGCTACGGTTCCCCCCAGCATCATCTATA
ACATAATATTATACAACCAGTTCAGTATGCAGCAATCGATGCAGGCAAAACAAACCTTTAGATCGGTCGGTTTTTGATCC
AAATCTTCTAAAATTTTAACGAGATCCTGAGCCACCTCCGATACTCGAGTCTCCATCGTTCGCCGTCCAATCCAAGTCTA
CATTAAGTGTATGGATACTCAATCTTTTTAATGTATGGCGGCATATTCAGACAACCAGTAAGGTACTATACTGGGTAGAA
GCAACTGCCGTTTTGGTTTTTCAAGGGAACATACGCCTGCAATGGTTACGACGACCAGCTCACTATAGGGCCCGGGTATA
AGATCCCGCCCAAACCACTGGCGCCTAAACGCCGGAAAGGGTGGGCCACCCATTCCTGCTTTCCGGGGGCAAGGGATGTT
CCCACAAACAAATGCCAACAACAGTAATCCCGCTGGGTTTCGAACAAAAAAATGCTAAAAAGCAAGTTTGCAATAATTGG
GCTTATTTTTAACCCCCGAATTCCCTAAGGTTTATATGGGAATTAACCTCCGAAGAGGGGAAACTAAGGTTCTAAAC

>GCiWno778_a23.b1_4
                              V*NLSFPSSEVNSHINLREFGG*K*AQLLQTCFLAFFCSKPSGITVVGICLWEHPLPPES
                              RNGWPTLSGV*APVVWAGSYTRAL**AGRRNHCRRMFP*KTKTAVASTQYSTLLVV*ICR
                              HTLKRLSIHTLNVDLDWTANDGDSSIGGGSGSR*NFRRFGSKTDRSKGLFCLHRLLHTEL
                              VV*YYVIDDAGGNRSKRSLQRSFWKDLRSK*P*VSICSTMQFRLVSSSLQIP*LNRYTLS
                              IKVRIPKTLRFTHPHYRDGRSFFSEFRS*VIF*HRYCFSAFFICFQYLLALETQRIQNI*
                              TSCSSTRS*DTYNLLNEP*
                              >GCiWno778_a23.b1_5
                              LEP*FPLFGG*FPYKP*GIRGLKISPIIANLLFSIFLFETQRDYCCWHLFVGTSLAPGKQ
                              EWVAHPFRRLGASGLGGILYPGPIVSWSS*PLQAYVPLKNQNGSCFYPV*YLTGCLNMPP
                              YIKKIEYPYT*CRLGLDGERWRLEYRRWLRISLKF*KIWIKNRPI*RFVLPASIAAY*TG
                              CIILCYR*CWGEP*QTFSAA*FLERLTI*VTLSINMQYNAVSTGKF*FANTVTEQIYPIN
                              QSSNTENIAVHAPALSRWEIFFQRISIMSDLLT*VLFFCFLYLFPISFSFGDPENSEYLN
                              FMFFYPKLRYIQPFKRALX
                              >GCiWno778_a23.b1_6
                              FRTLVSPLRRLIPI*TLGNSGVKNKPNYCKLAF*HFFVRNPAGLLLLAFVCGNIPCPRKA
                              GMGGPPFPAFRRQWFGRDLIPGPYSELVVVTIAGVCSLEKPKRQLLLPSIVPYWLSEYAA
                              IH*KD*VSIHLM*TWIGRRTMETRVSEVAQDLVKILEDLDQKPTDLKVCFACIDCCILNW
                              LYNIML*MMLGGTVANVLCSVVFGKTYDLSDPEYQYAVQCSFDW*VLVCKYRD*TDIPYQ
                              SKFEYRKHCGSRTRIIAMGDLFSANFDHE*SSNIGIVFLLSLSVSNIF*LWRPREFRIFK
                              LHVLLPEAEIHTTF*TSPX

>GCiWno778_a23.g1
AACGATTCGAGCTCGGTACCCCTGNAAGTCAAAGATTCTTCCGAAACAGTTTCTATACCTGGATTAGAACGTTGTATTAG
AAAACTCAAGTGAAATGCTAACCTTGTTACTGACTTCATAATTGTTAATCTATTTGCAGCTCACCACTCTTATAAGGCAC
GTAGTAACAATACAGGCATCTTTTGTTGTTGTTCTTTGCCATGAATGCTTTTAGACATGAATGCCTTCAAAAACTAATTT
CGTGAATGCTTTCAAAAACTAATTTCTTTGCCATGAATGCTTTCAAAAACTAATTTCAGCATTTACTTTTTAATCTTTTA
GAGTTTAATGAAAACGCTTAACCCCAAAGGTACCTAACCTTAATTAGCCAAAAACTAAACCGATGAAACCGAAAGGTGAT
TTATCACAATATGGTTTATACATCTAAGCTTAGTTAGAAACACTTCATAGAGTGCAAAAAAGTGCCAGCTTACGAGTTAC
CAAGTATGTTACTTTGAGGTAAATTCTCACAGGGTTGGAGCAATTGCCGTTAAGTGTCTTACCAAGGACACATACGCTCA
CAATGGTAGCAGCGTCGAGTCTTGAAGGCATTACCTCTGAGTTACAAGAAGACGCGCTATCCATTTGTTCTACCGCGGCG
GACGATGATGGGTTACTATACTTTCTAATTATGTGGTTTAAAATCTTAAAACTTTTTCTACCATTTATGATACTATGGGA
AGGATAGGGGGCACCATTTTTTTCTGCACAACAAAATTTTTGAAAATTCAAAAATTTATGCGGGATTCCCAAACGTTATT
TGGAGGGGTGCAAAATTCCACTATAATTCTTAATCACAACCCACCTTATCTCCAAACCCGCGTTAAGCAACCGAATATCC
TCCAAAATTTACCACCTTTTCGCCCCTACGCGTTGAAGTGCGGGAAAAAGGGACAAGGGTTTTTTTATTCCATTCCCGCC
CGAATTTTCCCCCCCCCCCTCTTATAAACCCGC

>ciht041o06 
          Length = 673

 Score = 57.0 bits (135), Expect = 2e-08
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 60 FGDPENSEYLXFMFFYPKLRYIQPF 84
          FGDPENSEYL FMFFYPKLRYIQPF
Sbjct: 12 FGDPENSEYLNFMFFYPKLRYIQPF 86

>ciht041o06
GTTTCGACTGCTTTGGAGACCCAGAGAATTCAGAATATTTAAACTTCATGTTCTTCTACCCGAAGCTCAGATACATACAA
CCTTTTAAAAGAGCCCTGAAGAAGTTTATTGATGTTCATCTTGGATTGATAGCATTCAACCAAAAAGAAATTAATCTTCA
CAAGGAAAGATTGGATGTGAACGAACCTGGAGATTACATCGATGCTTTCCTTATTGAGATGAAGAAACACTCTCCTGAAA
ATTCATGGTTCCATGAGACACAGCTTCTACATTGTTTAGGTGACATGTTTATTGCTGGAACAGAAACCACTACAAACACA
ATACTCTGGGCTTTATTGGCGTTAATACACCATCCAGAGATACAAGAAAAGTTATATCAAGAACTACTTGATAACATTGG
TGAACAAGTTCTTCCAAGTACCGATCACAGAGACAAAATCCCGCTCTTCCGTGCATTTACTCAAGAGGTTTATAGATTCA
AAACAATTGTACCCCTTGCCCTCCAACATCGAGCTAATAAAGACGTAGAGATTGGTGGATACGTCATACCTAAAGGAACA
AAGGTGTTTCCCAACCTCCATGCGGTTCACCACGATCCAAATATCTGGAAAAATCCGAGCGAGTTCAACATTTATCGTCA
CATCAGCAAAGACGGGAAATTTATTCCTTCGAA

>_3
FDCFGDPENSEYLNFMFFYPKLRYIQPFKRALKKFIDVHLGLIAFNQKEINLHKERLDVN
EPGDYIDAFLIEMKKHSPENSWFHETQLLHCLGDMFIAGTETTTNTILWALLALIHHPEI
QEKLYQELLDNIGEQVLPSTDHRDKIPLFRAFTQEVYRFKTIVPLALQHRANKDVEIGGY
VIPKGTKVFPNLHAVHHDPNIWKNPSEFNIYRHISKDGKFIPS
ciht041o06 
          Length = 673

 Score =  159 bits (398), Expect = 6e-39
 Identities = 75/79 (94%), Positives = 76/79 (95%), Gaps = 2/79 (2%)
 Frame = +3

Query: 5   QIPFFRAFTQEVYRFKTIVPLALQHRANKDVEIGGYVIPKG--VFPNLHAVHHDPNIWKN 62
           +IP FRAFTQEVYRFKTIVPLALQHRANKDVEIGGYVIPKG  VFPNLHAVHHDPNIWKN
Sbjct: 435 KIPLFRAFTQEVYRFKTIVPLALQHRANKDVEIGGYVIPKGTKVFPNLHAVHHDPNIWKN 614

Query: 63  PSEFNIYRHISKDGKFIPS 81
           PSEFNIYRHISKDGKFIPS
Sbjct: 615 PSEFNIYRHISKDGKFIPS 671

>GCiWno768_b20.b1
AAAAAACCAACCNCCNCCCCNNNAACNACNAANANCAACACANNNNNNNGGTTAAAATAANGGCAGCTTGCTGCCTGCAG
TCGATCTGAGGATCCCTAAGTACATTATTGGGTTTCATTGTATTTACAAGAATCATGGTTATAGGATTATAGCATGGCGC
CGACCAGAGTAATATGTTTTTACAGTTACACGAAGAAAAGCATTTACAAGATTACAGATGAGTTCGATAACGTCAATCCG
TTATTCGTTGATGATCCTCGGCTTTACAACAACTTTAAACCGGTATGGAACATATAGAAGACTGTTGACTCCATCTTTGA
GAATAGGAAGCTCTTTGCTCTCGGGATCAGGGAGGATTTCGAATCTTTTGATAATGTTAGCAAGGAAGAGGAAGACTTCT
GTGATCGCCAACTTTTCCCCAAGGCACGACCGAGCTCCCATACCGAACGCAACCACTCTCTTTGAAGGAATAAATTTCCC
GTCTTTGCTGATGTGACGATAAATGTTGAACTCGCTCGGATTTTTCCAGATATTTGGATCGTGGTGAACCGCATGGAGGT
TGGGAAACACCTGAAAGGATTAGAAGTATTTAAAACAAGAGCTGGACTAGTTTTATTAAATAGATATATAGAGTAACCTT
TGTTCCTTTAGGTATGACGTATCCACCAATCTCTACGTCTTTATTAGCTCGATGTTGGAGGGCAAGGGGTACAATTGTTT
TGAATCTATAAACCTCTTGAGTAAATGCACGGAAGAGCGGGATTTTGTCTCTGTGATCGGTACTTGGAAGAACTTGTTCA
CCTTTGAAATTTATTTTAGGTTTAGAAATCTACTTAGTGTTTAAGTGTAGGAGGTACCAATGTTATCAAGTAGTTCTTGA
TATAACTTTTCTGTATCTCTGGATGGGGAATAACGCCAATAAGCCCAAAGAATGGGTTTGAAAGGGTTCCGTTCAGCAAT
AG

>_4
                              IAERNPFKPILWAYWRYSPSRDTEKLYQELLDNIGTSYT*TLSRFLNLK*ISKVNKFFQV
                              PITETKSRSSVHLLKRFIDSKQLYPLPSNIELIKT*RLVDTSYLKEQRLLYISI**N*SS
                              SCFKYF*SFQVFPNLHAVHHDPNIWKNPSEFNIYRHISKDGKFIPSKRVVAFGMGARSCL
                              GEKLAITEVFLFLANIIKRFEILPDPESKELPILKDGVNSLLYVPYRFKVVVKPRIINE*
                              RIDVIELICNLVNAFLRVTVKTYYSGRRHAIIL*P*FL*IQ*NPIMYLGILRSTAGSKLP
                              LF*PXXCVXXXXXXGGGWFF
                              >_5
                              YC*TEPFQTHSLGLLALFPIQRYRKVISRTT**HWYLLHLNTK*ISKPKINFKGEQVLPS
                              TDHRDKIPLFRAFTQEVYRFKTIVPLALQHRANKDVEIGGYVIPKGTKVTLYIYLIKLVQ
                              LLF*ILLILSGVSQPPCGSPRSKYLEKSERVQHLSSHQQRREIYSFKESGCVRYGSSVVP
                              WGKVGDHRSLPLPC*HYQKIRNPP*SREQRASYSQRWSQQSSICSIPV*SCCKAEDHQRI
                              TD*RYRTHL*SCKCFSSCNCKNILLWSAPCYNPITMILVNTMKPNNVLRDPQIDCRQQAA
                              XILTXXXCXXXXXXGXXLVFX
                              >_6
                              LLLNGTLSNPFFGLIGVIPHPEIQKSYIKNYLITLVPPTLKH*VDF*T*NKFQR*TSSSK
                              YRSQRQNPALPCIYSRGL*IQNNCTPCPPTSS**RRRDWWIRHT*RNKGYSIYLFNKTSP
                              ALVLNTSNPFRCFPTSMRFTTIQISGKIRASSTFIVTSAKTGNLFLQREWLRSVWELGRA
                              LGKSWRSQKSSSSLLTLSKDSKSSLIPRAKSFLFSKMESTVFYMFHTGLKLL*SRGSSTN
                              NGLTLSNSSVIL*MLFFV*L*KHITLVGAML*SYNHDSCKYNETQ*CT*GSSDRLQAASC
                              XYFNXXXVLXXVVXGXXVGFX

>GCiWno768_b20.g1
CGGTACCCGTACGAAGCCCAACGCGACTAATGTTGTTGGCAGTTTTATTTGTGCGCAACACCTGGCCCCCACAAAGCAAG
AATGTTTAGGTCATACATTTCCGACGCTTAGGCACAGTTGTTTGTGCGCGATCCTAACCCAGATCTTACTGGTTGTCTGA
ATTGTCGGCCATACATTTAAAAGATTAAGTATTCATGTACTTGTAGACTTGGAATTGGACGGCGAACGATGGAGACTCGA
GTATCGGAGGTGGCTCAGGATCTCGTTAAAATTTTAGAAGATTTGGATCAAAAACCGACCGATCTAAAGGTTTGTTTTGC
CTGCATCGATTGCTGCATACTGATCTGGTTGTATAATGTTATGTTATAGATGATGCTGGGGGGAACCGTAGCAAACGTTC
TCTGCAGCGTAGTTTTTGGAAAGACTTACGATCTAAGTGACCCTGAGTATCAATATGCAGTACAATGCAGTTTCGACTGG
TAAGTTCTAGTTTGCAAATACCGTGACTGAACAGATATACCCTATCAATCAAAGTTCGAATACCGAAAACATTGCGGTTC
ACGCACCCGCATTATCGCGATGGGAGATCTTTTTTCAGCGAATTTCGATCATGAGTGATCTTCTAACATAGGTATTGTTT
TTCTGCTTTCTTTGACTGTTTCCAATATCTTTTAGCTTTGGAGACCCAGAGAATTCAGAATATTTANACTTCATGTTCTT
CTACCCGAAGCTGAGATACATACAACCTTTTAAAGAGCCCTGAAGAAGTTTATTGATGTTCATCTTGGATTGATAGGTTA
AATAATATGCTATGTTTGAGTGGTGGAATATANGCGCATGTCCACTCTANCAGGGTACACTGTGCAAATAT

>GCiWno768_b20.g1_1
                              RYPYEAQRD*CCWQFYLCATPGPHKARMFRSYISDA*AQLFVRDPNPDLTGCLNCRPYI*
                              KIKYSCTCRLGIGRRTMETRVSEVAQDLVKILEDLDQKPTDLKVCFACIDCCILIWLYNV
                              ML*MMLGGTVANVLCSVVFGKTYDLSDPEYQYAVQCSFDW*VLVCKYRD*TDIPYQSKFE
                              YRKHCGSRTRIIAMGDLFSANFDHE*SSNIGIVFLLSLTVSNIF*LWRPREFRIFXLHVL
                              LPEAEIHTTF*RALKKFIDVHLGLIG*IICYV*VVEYXRMSTLXGYTVQIX
                              >GCiWno768_b20.g1_2
                              GTRTKPNATNVVGSFICAQHLAPTKQECLGHTFPTLRHSCLCAILTQILLVV*IVGHTFK
                              RLSIHVLVDLELDGERWRLEYRRWLRISLKF*KIWIKNRPI*RFVLPASIAAY*SGCIML
                              CYR*CWGEP*QTFSAA*FLERLTI*VTLSINMQYNAVSTGKF*FANTVTEQIYPINQSSN
                              TENIAVHAPALSRWEIFFQRISIMSDLLT*VLFFCFL*LFPISFS FGDPENSEYLXFMFF
                              YPKLRYIQPF KEP*RSLLMFILD**VK*YAMFEWWNIXACPLXQGTLCKY
                              >GCiWno768_b20.g1_3
                              VPVRSPTRLMLLAVLFVRNTWPPQSKNV*VIHFRRLGTVVCARS*PRSYWLSELSAIHLK
                              D*VFMYL*TWNWTANDGDSSIGGGSGSR*NFRRFGSKTDRSKGLFCLHRLLHTDLVV*CY
                              VIDDAGGNRSKRSLQRSFWKDLRSK*P*VSICSTMQFRLVSSSLQIP*LNRYTLSIKVRI
                              PKTLRFTHPHYRDGRSFFSEFRS*VIF*HRYCFSAFFDCFQYLLALETQRIQNIXTSCSS
                              TRS*DTYNLLKSPEEVY*CSSWIDRLNNMLCLSGGIXAHVHSXRVHCAN

>sequence 67 1 accession 42% to 1B1
FTLRVDGVLKTFDNDDVTNVVASMTSEVLEKKSAGESREITESETKTIAALSADILGA (1?)
GQHTTSTTFFWVINLLLCFPKVLNKLTEEVRSKLGNRLPTLEDRTSLPYMDAVLTE (?) based on savingyi ortholog match
VLRFSSPLSSTIPHSTLKDVKLAGHTIKRGTMVIISQYAVNHDPQNWKNPENFDPERFLTK
NEGGEIIFNESLSEKVLAFSIGERKCPGSQLSRMLLFLATTLLVQVSDLSADLERPPT
AAAEYGLILRPKHLSIKLTLREHWQRRDSIRA*
GCiWno293_n12.b1
GCiWno539_p21.b1
GCiWno609_a08.b1
GCiWno231_f21.g1
GCiWno874_c22.b1
GCiWno874_c22.g1
 
GCiWno755_d15.b1
GCiWno674_m24.b1
GCiWno624_m24.b1
GCiWno339_d23.b1
GCiWno42_n19.g1
GCiWno815_c16.g1
GCiWno665_k11.g1

LQW275808.x1 

>scf/ciona01/G126/seq_dir/hrs/G126P604361R.T0/G126P604361RA8.T0.seq    743 file 17
            0    743  ABI
            Length = 743

  Minus Strand HSPs:

 Score = 133 (46.8 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 37/74 (50%), Positives = 46/74 (62%), Frame = -3

Query:     1 FTL-RVDGVLKTFDNDDVTNVVASMTSEVLEKK---------------SAGESREITESE 44
             FT  RV  +LK FD DDVTNVV+SMTSEVLE K               +  E + +TESE
Sbjct:   381 FTFFRVREILKKFDKDDVTNVVSSMTSEVLESKEDDSKRLTESDSKRLTESE*KRLTESE 202

Query:    45 TKTIAALSADILGA 58
              +TI++L+ DILGA
Sbjct:   201 IQTISSLAEDILGA 160

>scf/ciona01/G126/seq_dir/hrs/G126P64527F.T0/G126P64527FE7.T0.seq    714      0
            714  ABI
            Length = 714

  Plus Strand HSPs:

 Score = 104 (36.6 bits), Expect = 3.6e-05, P = 3.6e-05
 Identities = 22/35 (62%), Positives = 25/35 (71%), Frame = +3

Query:     4 RVDGVLKTFDNDDVTNVVASMTSEVLEKKSAGESR 38
             RV  +LK FD DDV+NVV+SMTSEVLE K     R
Sbjct:   606 RVREILKNFDKDDVSNVVSSMTSEVLESKEDDSKR 710 runs off end

>scf/ciona01/G126/seq_dir/hrs/G126P67079R.T0/G126P67079RD2.T0.seq    752      0
            752  ABI
            Length = 752

  Minus Strand HSPs:

 Score = 130 (45.8 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 29/48 (60%), Positives = 37/48 (77%), Frame = -2

Query:     1 FTL-RVDGVLKTFDNDDVTNVVASMTSEVLEKKSAGESREITESETKTI 48
             FT  RV  +LK FD DDVTNVV+SMTSEVLE K   +S+ +TES++K +
Sbjct:   205 FTFFRVREILKKFDKDDVTNVVSSMTSEVLESKE-DDSKRLTESDSKRL 62

>GCiWno874_c22.b1_1
NCPCPPTLRINS*IHSSMVATVGFELTSPPNTALSPKRNQQADKYVTKTINV*PKQ*SKS
HKV*SPSDNKRTY*STEAARSRLNFHFPKKLAIYG*LPVLLVNKFVL*SYATKSRLR*CV
YSNSAFWFRFTEFSMITAFRFNLVCLLKCKVRKLRCLLSFANKFLTFYYYKS*SVFFYIY
FYSRPTHNFYNFFLGHKFTPMFSKSPQ*THGRSPEQTRKQTSNLGGSKLPILRGRGTDRG
RKLNDCIYFRCRHMCYCLPXAPAWEVWVXNTTIYFIYHDCMLLIFLIA*RGQDX
>GCiWno874_c22.b1_2
TVLAPQR*G*IVKFIHPW*QQ*DSNSPRLRIPR*VRNETSRQTNT*QKR*TSNQSSNLKA
TKFNLQATINVPTDQQKPHAHV*ISIFQKN*QSTVNCLFCL*TSLCYKVMLPKADCGDVY
ILILHFGSDLLSFQ**QRLDLILSAY*NAKYENSGVYYPLLISFLHSIIINLNLCFFIFI
FIPGQHTTSTTFFWVINLLLCFPKVLNKLTEEVRSKLGNRLPTLEDRNSLSYVDAVLTEV
EN*TIVFTFVADTCVTACHXHQPGRYGXVTRPFTSFTMTACYLFFL*RSGGKT
>GCiWno874_c22.b1_3
LSLPPNAEDK*LNSFIHGSNSRIRTHLASEYRAESETKPAGRQIRDKNDKRLTKAVI*KP
QSLISKRQ*TYLLINRSRTLTFKFPFSKKTSNLRLIACFACKQVCVIKLCYQKPTAVMCI
F*FCILVQIY*VFNDNSV*I*SCLLIKMQSTKTQVFTILC**VSYILLL*ILICVFLYLF
LFQANTQLLQLFSGS*IYSYVFQKSSINSRKKSGANSETDFQPWRIETPYLTWTRY*QR*
KIKRLYLLSLQTHVLLPAIXTSLGGMGX*HDHLLHLP*LHATYFSYSVAGAR

Walk 1
>GCiWno624_m24.g1_1
TWFRHR*IWTAKVTKNETIIDLLRDT**YKCLESYFIMNERI*LIYFHVAEQ*QSL*HGC
SVSYTLCLLLRVTTYITFLLIADITI*KSYYCAYNAIIYFKSRWGS*NIRQ**RHKCSSF
DDVRGAREKVSGRIKGNNRKRDKNDCCSFSRYTWGG*AVVGTNFVSITILNE*MNECNLL
ILTWIQRQSL*HRCIKW*L*KLFTKKVIYRLGNS*AGCV*NRIPVLITVLAPPREDK*LN
SFIHGSHSRIRTHLASEYRAESETXPAGRQIR*QNDKRLTKAVILKAQSLISKRQ*TYLL
INKSPTLPVX
>GCiWno624_m24.g1_2
LGSDIGKYGRQKLRKTKL**TYYVTHDSINVWKVIL**MKEFNLFIFTWQSNDSRYNTVV
LFHTPCACFYELPRI*LFC*SPTLPFRKVTIAHIMQ*FTLRVDGVLKTFDNDDVTNVVAS
MTSEVLEKKSAGESREITESETKTIAALSADILGAGRLLLVQTLFRLQF*MNE*MNVTCL
S*RGFNDSRYNTGV*NGSSKNYSPKRLYIDLVTRKPDVYETEYPC**LSLPPHVRINS*I
HSSMVATVGFELTSPPNTALSPKRXQQADKYGDKTINVLPKQ*S*RHKV*SPSDNKRTY*
STRARRFPFX
>GCiWno624_m24.g1_3
LVQT*VNMDGKSYEKRNYNRLIT*HMIV*MFGKLFYNE*KNLTYLFSRGRAMTVVITRLF
CFIHLVPAFTSYHVYNFFADRRHYHLEKLLLRI*CNNLL*ESMGFLKHSTMMTSQM**LR
*RQRCSRKSQRENQGK*PKARQKRLLLFQQIYLGRVGCCWYKLCFDYNFE*MNE*M*LAY
PDVDSTTVVITPVYKMVALKIIHQKGYI*TW*LVSRMCMKQNTRVNNCPCPPT*G*IVKF
IHPW*PQ*DSNSPRLRIPR*VRNXTSRQTNTVTKR*TSYQSSNPKGTKFNLQATINVPTD
QQEPDASRF

>GCiWno539_p21.b1_1
                              *PRLRIPR*VRNETSRQTNT*QKR*TSNQSSNLKATKFNLQATINVPTDQQKPHAHV*IS
                              IFQKN*QSTVNCLFCL*TSLCYKVMLPKADCGDVYILILHFGSDLLSFQ**QRLDLILSA
                              Y*NAKYENSGVYYPLLISFLHSIIINLNLCFFIFIFIPGQHTTSTTFFWVINLLLCFPKV
                              LNKLTEEVRSKLGNRLPTLEDRNSLSYVDAVLTEVEN*TIVFNFVAETCXSACHCHHLEV
                              WXL*TNFNSFTMMDVLIFLIRSGAK
                              >GCiWno539_p21.b1_2
                              DLASEYRAESETKPAGRQIRDKNDKRLTKAVI*KPQSLISKRQ*TYLLINRSRTLTFKFP
                              FSKKTSNLRLIACFACKQVCVIKLCYQKPTAVMCIF*FCILVQIY*VFNDNSV*I*SCLL
                              IKMQSTKTQVFTILC**VSYILLL*ILICVFLYLFLFQANTQLLQLFSGS*IYSYVFQKS
                              SINSRKKSGANSETDFQPWRIETPYLTWTRY*QR*KIKRLYLISLQKHVVVPAIATTWKY
                              GACKRTLIHLQ*WMYXFFLYVAGQ
                              >GCiWno539_p21.b1_3
                              TSPPNTALSPKRNQQADKYVTKTINV*PKQ*SKSHKV*SPSDNKRTY*STEAARSRLNFH
                              FPKKLAIYG*LPVLLVNKFVL*SYATKSRLR*CVYSNSAFWFRFTEFSMITAFRFNLVCL
                              LKCKVRKLRCLLSFANKFLTFYYYKS*SVFFYIYFYSRPTHNFYNFFLGHKFTPMFSKSP
                              Q*THGRSPEQTRKQTSNLGGSKLPILRGRGTDRGRKLNDCI*FRCRNMX*CLPLPPPGSM
                              XLVNEL*FIYNDGCTXFSYT*RGK

Ortholog 62% 
KDTNEVRSKIGERIPTLEDQADLPYVEAFLTE (?)
VLRFASPLSSTIPHSTVKDTTLKGYKIKRNTMVIISQYSVNHDPKIWRNPEVFDPERFLTRD
ENTNLLFNDALAEKVLSFSVGERKCPGSRMSQMVLFLATCLLVHTGTLYPNPDRPPSPVD
DAQYGLILRPEYISMKFLLDKKWTNFGGNAVLNQKVNFIPFNSTPIPVDIAPIRVNFI*



>scf/ciona01/G126/seq_dir/hrs/G126P69880F.T0/G126P69880FD5.T0.seq    765      0
            765  ABI
            Length = 765

  Plus Strand HSPs:

 Score = 210 (73.9 bits), Expect = 6.9e-17, P = 6.9e-17
 Identities = 38/55 (69%), Positives = 47/55 (85%), Frame = +2

Query:     1 HTTSTTFFWVINLLLCFPKVLNKLTEEVRSKLGNRLPTLEDRTSLPYMDAVLTEV 55 intetinalis seq 67
             HTTS TFFWVIN+LL +PKVL ++T EVRSK+G R+PTLED+  LPY++A LTEV
Sbjct:   317 HTTSGTFFWVINILLFYPKVLQRITNEVRSKIGERIPTLEDQADLPYVEAFLTEV 481

>scf/ciona01/G126/seq_dir/hrs/G126P69880F.T0/G126P69880FD5.T0.seq_1 765 0    765  ABI
                              SLRYEPRFVVGIHSHTDNRQITLRSPSGYQSYFSVLCMIQAFLLFGRTHQSTEFRQCALS
                              SLPKDDQLDSDIVKPATL*SKGNAPNHHAIGQTNSFMTNFHAYRTTHNIRNVFLGDKYSS
                              LLPESPSKDYE*SPE*DRRKNSDFGRPSRSSIR*SIFD*GIK*YLQLICRLKKGCIVLPI
                              LPLIRQNNLVV*YVLLTERL*VQNWTLACRLCLWARHLTDIA*TQRNNGFYQIEGKCLSY
                              TTRCNSSDSRTVGAG
                              >scf/ciona01/G126/seq_dir/hrs/G126P69880F.T0/G126P69880FD5.T0.seq_2 765 0    765  ABI
                              ACGMNLALWXEFIHTRTIVR*PCAHRRVTRATSVCCV*FRRFFYLVEPTNPLNLGNVR*V
                              LCLKTTN*TATLSSPQPFSRKATHQTTMLSVRPTHL*PISTHTGQHTTSGTFFWVINILL
                              FYPKVLQRITNEVRSKIGERIPTLEDQADLPYVEAFLTEV*NNIFS*SVG*KRVV*FCLF
                              YL*SDRII*WFSTSF*LKGCRFKTGH*LVVYVCGQGT*QTLPKPSGIMGFTKLKESVYHI
                              QHAAIAQIAGQWAQ
                              >scf/ciona01/G126/seq_dir/hrs/G126P69880F.T0/G126P69880FD5.T0.seq_3 765 0    765  ABI
                              PAV*TSLCGXNSFTHGQSSDNLALTVGLPELLQCVVYDSGVSSIW*NPPIH*I*AMCVKF
                              FA*RRPIRQRHCQARNPLVERQRTKPPCYRSDQLIYDQFPRIQDNTQHQERFSG**IFFS
                              STRKSFKGLRMKSGVRSEKEFRLWKTKPIFHTLKHF*LRYKIISSADL*VKKGLYSFAYF
                              TSNPTE*SSGLVRPFN*KVVGSKLDTSLSFMSVGKALNRHCLNPAE*WVLPN*RKVSIIY
                              NTLQ*LR*PDSGRR


>scf/ciona01/G126/seq_dir/hrs/G126P603022F.T0/G126P603022FC12.T0.seq    726      0    726  ABI
SEI*YLATGGGILQALKGNQKVIMTRLHCVRQLITTTRSRKTAGTFIGHVFLYIGKSVDE
FTVALRLHCNKACQVTAF*CLGLVDSIDRLFRIIWHVDHTLSKPNQ*LCVV**QMWYFTD
*DRIEY*CLSP*MGKGKGVNTRTIVR*PCAHRRVTRATSVCCV*FRRFFYLVEPTNPLNL
GNVR*VLCLKTTN*TATLSSPQPFSRKATHQTHMLSVRPTHL*PISPHTGQHPHQERFSG
*Y
>scf/ciona01/G126/seq_dir/hrs/G126P603022F.T0/_2
RRSDISPLVVEFYKRLKAIRK*L*LDYIVCAN*SLPHGHGKPLARL*VTFFCI*ANQSTN
LRWR*DYIAIKLAKLLHFDVWD*WIQLTVCLGLFGM*TIHCPNQTNDFVLFNNKCGILPI
RIE*NINVYPREWEKARGLTHGQSSDNLALTVGLPELLQCVVYDSGVSSIW*NPPIH*I*
AMCVKFFA*RRPIRQRHCQARNPLVERQRTKPTCYRSDQLIYDQFPPIQDNTHIRNVFLG
D
>scf/ciona01/G126/seq_dir/hrs/G126P603022F.T0/_3
GDLISRHWWWNSTSA*RQSESDYD*TTLCAPINHYHTVTENRWHVYRSRFFVYRQISRRI
YGGVKITLQ*SLPSYCILMFGISGFN*PFV*DYLACRPYTVQTKPMTLCCLITNVVFYRL
G*NRILMFIPVNGKRQGG*HTDNRQITLRSPSGYQSYFSVLCMIQAFLLFGRTHQSTEFR
QCALSSLPKDDQLDSDIVKPATL*SKGNAPNPHAIGQTNSFMTNFPPYRTTPTSGTFFWV
I

>scf/ciona01/G126/seq_dir/hrs/G126P68147F.T0/G126P68147FG5.T0.seq    733      0
            733  ABI
            Length = 733

  Minus Strand HSPs:

 Score = 228 (80.3 bits), Expect = 8.8e-19, P = 8.8e-19
 Identities = 45/47 (95%), Positives = 46/47 (97%), Frame = -2

Query:    14 QALKGNQKVIMTRLHCVRQLITTTRSRKTAGTFIGHVFLYIGKSVDE 60
             +ALKGNQKV MTRLHCVRQLITTTRSRKTAGTFIGHVFLYIGKSVDE
Sbjct:   282 KALKGNQKVKMTRLHCVRQLITTTRSRKTAGTFIGHVFLYIGKSVDE 142

>scf/ciona01/G126/seq_dir/hrs/G126P68147F.T0/_4
QVVCLLRLICVEIYMIGTLKMWHRCTGGVLIKVD*RTNINGRVFGNMAQMDRWCAYQGLF
VWKYI*SAL*KCGTDVQVVCLSRLINVQI*RTIEMLHRLFCVQRSTVGIPVNK*HAYYFY
LCTNVYGRDFGTLLTNFYAQFS*NWVVSTYKALKGNQKVKMTRLHCVRQLITTTRSRKTA
GTFIGHVFLYIGKSVDEFTVALRLHCNKACQVTAF*CLGLVDSIDRLFRIMGFHXQEEGF
IXPV
>scf/ciona01/G126/seq_dir/hrs/G126P68147F.T0/_5
TGGVLIKVDLCGNIYDRHFENVAQMYRWCAYQG*LTYKYKWSGLWKYGTDGQVVCLSRFI
CVEIYMIGTLKMWHRCTGGVLIKVD*RTNITYNRNVAQAFLCAKIYSRDPSKQVTCLLLL
FVYKCIWSRLWNSAYEFLRTVFVELGCEYI*SA*RQSESEND*TTLCAPINHYHTVTENR
WHVYRSRFFVYRQISRRIYGGVKITLQ*SLPSYCILMFGISGFN*PFV*DYGFPPTGRGV
YXPSX
>scf/ciona01/G126/seq_dir/hrs/G126P68147F.T0/_6
RWCAY*G*FVWKYI*SAL*KCGTDVQVVCLSRLINVQI*MVGSLEIWHRWTGGVLIKVYL
CGNIYDRHFENVAQMYRWCAYQG*LTYKYNVQ*KCCTGFFVCKDLQSGSQ*TSNMLITFI
CVQMYMVETLELCLRISTHSFRRTGL*VHIKRLKAIRK*K*LDYIVCAN*SLPHGHGKPL
ARL*VTFFCI*ANQSTNLRWR*DYIAIKLAKLLHFDVWD*WIQLTVCLGLWVSTXRKRGL
XPQS

>GCiWno609_a08.b1 CHROMAT_FILE: GCiWno609_a08.b1 PHD_FILE: GCiWno609_a08.b1.phd.1
           CHEM: term DYE: big TIME: Mon Oct 29 10:00:32 2001
           TEMPLATE: GCiWno609_a08 DIRECTION: fwd
          Length = 875

 Score = 47.3 bits (110), Expect = 3e-05
 Identities = 21/32 (65%), Positives = 26/32 (80%)
 Frame = +2

Query: 1   KDTNEVRSKIGERIPTLEDQADLPYVEAFLTE 32
           K T EVRSK+G R+PTLED+  LPY++A LTE
Sbjct: 371 KLTEEVRSKLGNRLPTLEDRTSLPYMDAVLTE 466 best match to savignyi ortholog

>scf/ciona01/G126/seq_dir/hrs/G126P65894F.T0/_4
PGITRNYXAYPINNSNVCSSDLYFRKGKV*F*LS*FFLLLCSSIYKQ*MYQIITREQGRP
KKRALV*HVINRRGISSDGIQKVRMDSVEPVFGTSG*SPIRFLLFYRH*TF*GTCC**VR
YKR*PVRKILNPITGYMAVL*LENFKV*TLIPFTGKFTFILNAISRSCVLRLLYPAPYHI
PRQRTRHLKVTKSNEIRW*S*ASILSITIRKSGGIPKFLTPNGF*QEMRTRRNPPQGENQ
>scf/ciona01/G126/seq_dir/hrs/G126P65894F.T0/_5
GDNTKLXCLSHK*QQCLFF*SVF*KGKSLVLVELVFFITLL*YL*TVNVPNHNT*TG*TE
KTSTRLTRNQ*EGYKQRWDSKGSHGFGRTRFWNVGIITDPILAFLQTLDLLGNLLLVSTI
QKITCS*NFESHHWLYGRIMIREF*SLNSDTIYW*IYFYTERHFQVLRFASPLSSTIPHS
TTKDTTLKGYKIKRNTMVIISQYSVNHDPKIWRNPEVFDPERFLTRDENTKKSTTGRESX
>scf/ciona01/G126/seq_dir/hrs/G126P65894F.T0/_6
RG*HEIXLPIP*ITAMSVLLICILEREKFSFS*VSFFYYFALVFINSKCTKS*HVNRVDR
KNEHSFNT*SIGGV*AAMGFKRFAWIRSNPFLERRDNHRSDSCFFTDIRPFREPVVSKYD
TKDNLFVKF*IPSLVIWPYYD*RILKFKL*YHLLVNLLLY*TPFPGPAFCVSSIQHHTTF
HDKGHDT*RLQNQTKYDGNHKPVFCQSRSENLAESRSF*PRTVFNKR*EHEEIHHRARIX

>scf/ciona01/G126/seq_dir/hrs/G126P69755F.T0/G126P69755FH8.T0.seq    752      0
            752  ABI
            Length = 752

  Plus Strand HSPs:

 Score = 264 (92.9 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
 Identities = 54/59 (91%), Positives = 54/59 (91%), Frame = +3

Query:    49 GITRNYXAYPINNSNVCSSDLYFRKGKV*F*LS*FFLLLCSSIYKQ*MYQIITREQGRP 107
             GI  N   YPINNSNVCSSDLYFRKGKV*F*LS*FFLLLCSSIYKQ*MYQIITREQGRP
Sbjct:   486 GINTNILPYPINNSNVCSSDLYFRKGKV*F*LS*FFLLLCSSIYKQ*MYQIITREQGRP 662

 Score = 68 (23.9 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
 Identities = 13/32 (40%), Positives = 19/32 (59%), Frame = +1

Query:    16 KIENELNEVLDDYLPTLHDQESLPHTMAFINE 47
             K  NE+   + + +PTL DQ  LP+  AF+ E
Sbjct:    55 KDTNEVRSKIGERIPTLEDQADLPYVEAFLTE 150

>scf/ciona01/G126/seq_dir/hrs/G126P65113R.T0/G126P65113RH6.T0.seq    741 file 3
            741  ABI
            Length = 741

  Plus Strand HSPs:

 Score = 478 (168.3 bits), Expect = 2.8e-45, P = 2.8e-45
 Identities = 89/143 (62%), Positives = 117/143 (81%), Frame = +3

Query:     2 RFSSPLSSTIPHSTLKDVKLAGHTIKRGTMVIISQYAVNHDPQNWKNPENFDPERFLTKN 61
             RF+SPLSSTIPHST+KD  L G+ IKR TMVIISQY+VNHDP+ W+NPE FDPERFLT++
Sbjct:   183 RFASPLSSTIPHSTVKDTTLKGYKIKRNTMVIISQYSVNHDPKIWRNPEVFDPERFLTRD 362

Query:    62 EGGEIIFNESLSEKVLAFSIGERKCPGSQLSRMLLFLATTLLVQVSDLSADLERPPTAA- 120
             E   ++FN++L+EKVL+FS+GERKCPGS++S+M+LFLAT LLV    L  + +RPP+   
Sbjct:   363 ENTNLLFNDALAEKVLSFSVGERKCPGSRMSQMVLFLATCLLVHTGTLYPNPDRPPSPVD 542

Query:   121 -AEYGLILRPKHLSIKLTLREHW 142
              A+YGLILRP+++S+K  L + W
Sbjct:   543 DAQYGLILRPEYISMKFLLDKKW 611

>LQW275808.x1_4
LHGADVVLSPRVVGISLLLLARDATFRVSSLALLRDIGVLFWATLLPLSPRGSGFEPT*F
FTERWNFFLYLRGQPIVKEPGIVTNSPWPAYQLPHRDGSRDFLEYFLL*FDISIST*FFR
FSSPLSSTIPHSTLKDVKLAGHTIKRGTMVIISQYAVNHDPQNWKNPENFDPERFLTKNE
GGEIIFNESLSEKVLAFSIGERKCPGSQLSRMLLFLATTLLVQVSDLSADLERPPTAAAE
YGLILRPKHLSIKLTLREHWQRRDSIRA*HSIFYKCTNI*CTENPIRFCENIT
>LQW275808.x1_5
LARCRCCFVTTCCGYFFASIGTRCDLPGLLFSAAAGYRGFILGNAFAPLPPREWV*TDLI
LHGEVELFSILTGTTHC*RTGDSYKQPVARLPVTTQRW**RFFRIFFVMI*YFYFYVVFP
VFVAFIQHYTTFYVKRRQTSRPHH*ERHYGYH*SIRCKPRPAKLEKSGKF*PRAISNEKR
RR*NYLQRKFIRKGSRIFDWGA*MSRKSIVTNVTIFGHYTAGSSQ*FICRSRAPTDGSGG
VWFNFTTKTLIHKIDTKRALATS*LNSRITQHILQVYQHLMH*KSYTIL*KHHX
>LQW275808.x1_6
SCTVPMLFCHHVLWVFLCFYWHAMRPSGSPL*RCCGISGFYFGQRFCPSPPAGVGLNRLD
SSRRGGTFFYTYGDNPLLKNRG*LQTARGPLTSYHTEMVVEIF*NIFCYDLIFLFLRSFS
GFRRLYPALYHILR*KTSN*QATPLREALWLSLVNTL*TTTRKIGKIRKILTQSDF*RKT
KAVKLSSTKVYQKRFSHFRLGSVNVPEVNCHECYYFWPLHCWFKSVIYLPISSAHRRQRR
SMV*FYDQNTYP*N*H*ESTGNVVTQFAHNTAYFTSVPTFDALKILYDFVKTSP

>GCiWno755_d15.b1
TTATATAATTGCACTCTATGGTAATAATACTTGCATATAGGTAAGTTAACGTTCATAAAGTGATCTGTGGTGTTTTGTGT
ACCTTTTTTCATTTTTTCATTTGTGTATTTTCACAAAATCGTATAAGATTTTCAGTGCATCAAATGTTGGTACACTTGTA
AAAAATGCTGTGTTATGCGCGAATTGAGTCACGACGTTGCCAGTGCTCTCTTAGTGTCAATTTTATGGATAAGTGTTTTG
GTCGTAAAATTAAACCATACTCCGCCGCCGCCGTCGGTGGGCGCTCGAGATCGGCAGATAAATCACTGACTTGAACCAGC
AGTGTAGTGGCCAAAAATAGTAACATTCGTGACAATTGACTTCCGGGACATTTACGCTCCCCAATCGAAAATGCGAGAAC
CTTTTCTGATAAACTTTCGTTGAAGATAATTTCACCGCCTTCGTTTTTCGTTAGAAATCGCTCTGGGTCAAAATTTTCCG
GATTTTTCCAATTTTGCGGGTCGTGGTTTACAGCGTATTGACTAATGATAACCATAGTGCCTCTCTTAATGGTGTGGCCT
GCTAGTTTGACGTCTTTTAACGTAGAATGTGGTATAGTGCTGGATAAAGGCGACGAAAACCGCCAAACCTACGTAGAAAT
AGAAATTTAAAATCTTTACAAAAATATTTTTAAAAAATCTCTACTACCATATATGTGTGGTAACTTGTAAAGCGTCACGG
CATGTATGAAACATACCACCTGTGCTTAAATACCACTGTCTTTGCCCCGCTACGCTATAGAAAAATAGGTAACATCATTC
ATGGAAATGAATTAATGGTCGTTTAACAACCCAAACTTTCAGGTTGGTGGCAATGGCAANCACTAACCATGTTCCTGCAC
AAAATAAAAAAAATCCTTAATTTTTT

>_4
                              KKLRIFFILCRNMVSXCHCHQPESLGC*TTINSFP*MMLPIFL*RSGAKTVVFKHRWYVS
                              YMP*RFTSYHTYMVVEIF*KYFCKDFKFLFLRRFGGFRRLYPALYHILR*KTSN*QATPL
                              REALWLSLVNTL*TTTRKIGKIRKILTQSDF*RKTKAVKLSSTKVYQKRFSHFRLGSVNV
                              PEVNCHECYYFWPLHCWFKSVIYLPISSAHRRRRRSMV*FYDQNTYP*N*H*ESTGNVVT
                              QFAHNTAFFTSVPTFDALKILYDFVKIHK*KNEKRYTKHHRSLYER*LTYMQVLLP*SAI
                              I*
                              >_5
                              KIKDFFYFVQEHG*XLPLPPT*KFGLLNDH*FISMNDVTYFSIA*RGKDSGI*AQVVCFI
                              HAVTLYKLPHIYGSRDFLKIFL*RF*ISIST*VWRFSSPLSSTIPHSTLKDVKLAGHTIK
                              RGTMVIISQYAVNHDPQNWKNPENFDPERFLTKNEGGEIIFNESLSEKVLAFSIGERKCP
                              GSQLSRMLLFLATTLLVQVSDLSADLERPPTAAAEYGLILRPKHLSIKLTLREHWQRRDS
                              IRA*HSIFYKCTNI*CTENLIRFCENTQMKK*KKVHKTPQITL*TLTYLYASIITIECNY
                              IX
                              >_6
                              KN*GFFLFCAGTWLVXAIATNLKVWVVKRPLIHFHE*CYLFFYSVAGQRQWYLSTGGMFH
                              TCRDALQVTTHIW**RFFKNIFVKILNFYFYVGLAVFVAFIQHYTTFYVKRRQTSRPHH*
                              ERHYGYH*SIRCKPRPAKLEKSGKF*PRAISNEKRRR*NYLQRKFIRKGSRIFDWGA*MS
                              RKSIVTNVTIFGHYTAGSSQ*FICRSRAPTDGGGGVWFNFTTKTLIHKIDTKRALATS*L
                              NSRITQHFLQVYQHLMH*KSYTIL*KYTNEKMKKGTQNTTDHFMNVNLPICKYYYHRVQL
                              YX

>GCiWno674_m24.b1_4
YSRPPHNXYNFXWVIINSXVSKVPQ*THGRSPEQLXXQTSNLXDRNSLSYVDAVLTEVXN
*TIVFNFVAETCVSACHCHQPGRYGFVKRTFNSFTMNDCNLFFL*RSGAKTVVIKHRWYV
SYMP*PLTSYHTYIVVEIF*NIFCYDFIFLFLRRFCGFRRLYPALYHILR*KTSN*QATP
LREALWLSLVNTL*TTTRKIGKIRKILTQSDF*RKTKAVKLSSTKVYQKRFSHFRLGSVN
VPEVNCHECYYFWPLHCWFKSVIYLPISSAHRRRRRSMV*FYDQNTYP*N*H*E
>GCiWno674_m24.b1_5
LFQATTQLXQLXLGHN*LXCFQSPSINSRKKSGATRKXDFQLXGSKLPILRGRGTDRGRX
LNDCI*FRCRNMC*CLPLPPAWKVWVCKTNI*FIYNE*L*LIFLIA*RGKDSCYKAQVVC
FIHAVTAYKLPHIYCSRDFLKYFLL*FYISIST*VLRFSSPLSSTIPHSTLKDVKLAGHT
IKRGTMVIISQYAVNHDPQNWKNPENFDPERFLTKNEGGEIIFNESLSEKVLAFSIGERK
CPGSQLSRMLLFLATTLLVQVSDLSADLERPPTAAAEYGLILRPKHLSIKLTLRX
>GCiWno674_m24.b1_6
FIPGHHTTXTTXFGS*LTLMFPKSLNKLTEEVRSNSXXRLPTXRIETPYLTWTRY*QR*X
IKRLYLISLQKHVLVPAIATSLEGMGL*NEHLIHLQ*MIVTYFSYSVAGQRQLL*STGGM
FHTCRDRLQVTTHIL**RFFKIFFVMILYFYFYVGFAVFVAFIQHYTTFYVKRRQTSRPH
H*ERHYGYH*SIRCKPRPAKLEKSGKF*PRAISNEKRRR*NYLQRKFIRKGSRIFDWGA*
MSRKSIVTNVTIFGHYTAGSSQ*FICRSRAPTDGGGGVWFNFTTKTLIHKIDTKX

>GCiWno874_c22.b1_1
NCPCPPTLRINS*IHSSMVATVGFELTSPPNTALSPKRNQQADKYVTKTINV*PKQ*SKS
HKV*SPSDNKRTY*STEAARSRLNFHFPKKLAIYG*LPVLLVNKFVL*SYATKSRLR*CV
YSNSAFWFRFTEFSMITAFRFNLVCLLKCKVRKLRCLLSFANKFLTFYYYKS*SVFFYIY
FYSRPTHNFYNFFLGHKFTPMFSKSPQ*THGRSPEQTRKQTSNLGGSKLPILRGRGTDRG
RKLNDCIYFRCRHMCYCLPXAPAWEVWVXNTTIYFIYHDCMLLIFLIA*RGQDX
>GCiWno874_c22.b1_2
TVLAPQR*G*IVKFIHPW*QQ*DSNSPRLRIPR*VRNETSRQTNT*QKR*TSNQSSNLKA
TKFNLQATINVPTDQQKPHAHV*ISIFQKN*QSTVNCLFCL*TSLCYKVMLPKADCGDVY
ILILHFGSDLLSFQ**QRLDLILSAY*NAKYENSGVYYPLLISFLHSIIINLNLCFFIFI
FIPGQHTTSTTFFWVINLLLCFPKVLNKLTEEVRSKLGNRLPTLEDRNSLSYVDAVLTEV
EN*TIVFTFVADTCVTACHXHQPGRYGXVTRPFTSFTMTACYLFFL*RSGGKT
>GCiWno874_c22.b1_3
LSLPPNAEDK*LNSFIHGSNSRIRTHLASEYRAESETKPAGRQIRDKNDKRLTKAVI*KP
QSLISKRQ*TYLLINRSRTLTFKFPFSKKTSNLRLIACFACKQVCVIKLCYQKPTAVMCI
F*FCILVQIY*VFNDNSV*I*SCLLIKMQSTKTQVFTILC**VSYILLL*ILICVFLYLF
LFQANTQLLQLFSGS*IYSYVFQKSSINSRKKSGANSETDFQPWRIETPYLTWTRY*QR*
KIKRLYLLSLQTHVLLPAIXTSLGGMGX*HDHLLHLP*LHATYFSYSVAGAR

>sequence 68 2 accessions 44% to 2U1
GIQGQVTQMETVYSLTYEQLVAM (0)
CRDLFMAGTDTTSSTTSWIILFLCRYPEVQRKMQEEADQVLGSNGEPKMALAEKMPYTR (2?)
FFFQEINRIRPNVPLSVPHYSSKDTMV 116
MGYKIPKDTIVLTNIWGIHHDEKLWKNPYDFNPERHLDSNGKFIK 334
SSKVIQFNIGLRSCLGQQLANMELFLVTVSIFRQFSFSFNPGDKIDM 193
EGESVIALRPYSYRVI (?)
DCYVPIFLLYFPTIHPGCWSEKGTHAWRVGLCPLCSCKLLSM*
LQW19026.x1 
DEV2228.y1  
LQW213586.x1 
cicl021m24

>LQW213586.x1_4
PXHTVRRKEGPRAPTVPLGSYNLQRAYFVWTTPAVPSRP*SEPEATRRIIAKGLMSTPET
GRSERPDDCGEV*GIQGQVTQMETVYSLTYEQLVAMVSVGYGKKYVSARLANGFFELNYC
KLYLSNKSYFHKYLGTYNISVQLFSQPPRGRQH*ALPVHKVK*ICYYCL*QILNALPFSV
EISSWREPIQHHQQLLGSFSSSVDTRRFRGRCKKKRIKFLDQMENQRWHLLRRCLTRELL
FR*KEFSSFVLVALLYA*KAMVYSMWRVENKDFSSRKLTGYAQMSHSLYLTIPLRIQWSW
DTRFQRTPSY*LTSGEFTMMRNCGKTHTTLIQRGILT
>LQW213586.x1_5
SSPHGKAEGGAASAHSAPWELQPPTRVLRVDHPSRTVTAVK*ARGHKAYNSQRAHVHTRN
RQVRTTRRLW*SMRDSGTGDPNGNSILFDI*ATCGNGKCRLWKEICKCKTCKRFF*VKLL
QALFV*QELFSQIFRYL*HIGTTIFSATKRKAALSLTSAQSKMNMLLLLITNIECFAFQC
RDLFMAGTDTTSSTTSWIILFLCRYPEVQRKMQEEADQVLGSNGEPKMALAEKMPYTRAV
IQVERVF*FCVSCITVCMKGNGV*HVAGRK*RFFFQEINRIRPNVPLSVPHYSSKDTMVM
GYKIPKDTIVLTNIWGIHHDEKLWKNPYDFNPERHLDX
>LQW213586.x1_6
LXTR*GGRRGRERPQCPLGATTSNARTSCGPPQPYRHGRKVSQRPQGV**PKGSCPHQKQ
AGQNDQTTVVKYEGFRDR*PKWKQYTL*HMSNLWQW*V*VMERNM*VQDLQTVFLS*ITA
SSICLTRVIFTNI*VPITYRYNYFLSHQEEGSTKPYQCTK*NEYATTAYNKY*MLCLSVS
RSLHGGNRYNIINNFLDHSLPLSIPGGSEEDARRSGSSSWIKWRTKDGTC*EDALHASCY
SGRKSFLVLC*LHYCMHERQWCIACGG*KIKIFLPGN*PDTPKCPTLCTSLFL*GYNGHG
IQDSKGHHRTN*HLGNSP**ETVEKPIRL*SREAS*P

>cicl021m24 
          Length = 596

 Score =  197 bits (495), Expect = 6e-50
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = -2

Query: 1   MGYKIPKDTIVLTNIWGIHHDEKLWKNPYDFNPERHLDSNGKFIKSSKVIQFNIGLRSCL 60
           MGYKIPKDTIVLTNIWGIHHDEKLWKNPYDFNPERHLDSNGKFIKSSKVIQFNIGLRSCL
Sbjct: 559 MGYKIPKDTIVLTNIWGIHHDEKLWKNPYDFNPERHLDSNGKFIKSSKVIQFNIGLRSCL 380

Query: 61  GQQLANMELFLVTVSIFRQFSFSFNPGDKIDM 92
           GQQLANMELFLVTVSIFRQFSFSFNPGDKIDM
Sbjct: 379 GQQLANMELFLVTVSIFRQFSFSFNPGDKIDM 284

>cicl021m24
AAACTACAATGGNAGTATAGGGTACCAGCCACATATGAATGCCGGCACCAATGAACATGATGAACAGCAGCACAGNATAA
AAGGACATATAATGCCACTGGGTAAGCTACATGGATAGAAGTTTGCAGCTACATAGAGGACATAGCCCAACTCTCCAAGC
ATGAGTGCCTTTTTCACTCCAACAACCCGGATGAATAGTGGGGAAATAAAGAAGGAAGATAGGAACGTAACAATCAATTA
CCCTGTATGAGTAAGGTCTTAAAGCAATTACGCTCTCACCTTCCATGTCTATCTTATCCCCTGGATTAAACGAGAAAGAA
AATTGTCGGAAAATTGATACTGTGACCAAGAACAACTCCATGTTTGCCAGCTGTTGACCAAGGCAGCTTCGGAGACCGAT
ATTAAACTGAATTACTTTGCTTGATTTAATAAACTTGCCATTTGAATCAAGATGCCTCTCTGGATTAAAGTCGTATGGGT
TTTTCCACAGTTTCTCATCATGGTGAATTCCCCAGATGTTAGTTAGTACGATGGTGTCCTTTGGAATCTTGTATCCCATG
ACCATTGTATCCTTAGAGGAATAGTGAGGTACAGAG

SVPHYSSKDTMVMGYKIPKDTIVLTNIWGIHHDEKLWKNPYDFNPERHLDSNGKFIKSSK
VIQFNIGLRSCLGQQLANMELFLVTVSIFRQFSFSFNPGDKIDMEGESVIALRPYSYRVI
DCYVPIFLLYFPTIHPGCWSEKGTHAWRVGLCPLCSCKLLSM*

>sequence 58, 70 2 accessions 45% to 2R1
KIQLYHLIRDIFVGGIDTTTATLGWGIICLLHYPECQIRIQEEIEDVIG
NSEPDMTHQEHMPYLRAFVQEVHRYCTIAPFSIPHCVTEDCVLFGYHIPK
STPVMSNIWRVHNDPKYWKNPEKFSP 199
ERHLDLEGRFVPSNRVLPFAVGHRRCVGEQMAKVGLFLFWASFLQKCE 238
IHIDSDFGLPSWKKEPSGTVRSPQEFTVKVRNRLQNN*
LQW195444.x1 
DEV32479.y1  
LQW231798.y1 

>_4
MPP*HLLKIFNWSHLLDINPVLFLNYSRTKFLLFL*PRKYM*AIHNCETYH*INTTK**N
KLALGYYI**RVGDLWNIISRYPDRVF*KNNNSTIL*YIINKLTHVKNLHIGNSEPDMTH
QEHMPYLRAFVQEVHRYCTIAPFSIPHCVTEDCVLFGFHIPKSTPVMSNIWRVHNDPKYW
KNPEKFSPERHLDLEGRFVPFNRVLPFAVGHRRCVGEQMAKVGLFLFWASFLQKCEIHID
SDFGLPSWKKEPSGTVRSPQEFTVKVRNRLQNN*TV*IRIKLTCCTNKSLLLSYILNKAC
*YFLQIIWYSR*ALP
>_5
NASLTSFEDFQLVPPLGY*SRPVS*LFPNQIFTFPIATKIHVSNPQL*NLPLD*YY*IVK
QIGPRLLYIVACGGSLEHNIQIS*PCFLKK*QLYYTIIYNQQTYPR*ELAYR*FRTRYDT
SRTHAVSSCFCTRSPQILHHSSVQYSPLRH*RLRSFWFPHTEVDTGDEQYMESPQRSEIL
EKSGEIFP*TSLRFRRSIRSI*SCSAICCRP*TLRWRTNGKGWSVSILGFIFAEMRNSH*
L*LWFT*LEERTFWNRAISTGVYSQSSKSFTE*LNSIDSYKVNLLYK*IITFIVYPK*SV
LIFLTDYLV**VSTAX
>_6
*CLPNIF*RFSIGPTSWILIPSCFLIIPEPNFYFSYSHENTCKQSTTVKLTIRLILLNSK
TNWPSVIIYSSVWGIFGT*YPDILTVFFKKITTLLYYNI*STNLPTLRTCI*VIPNQI*H
IKNTCRIFVLLYKKSTDIAP*LRSVFPTASLKTAFFLVSTYRSRHR**AIYGESTTIRNI
GKIRRNFPLNVT*I*KVDSFHLIVFCHLLSAIDAALENKWQRLVCFYSGLHFCRNAKFTL
TLTLVYLVGRKNLLEPCDLHRSLQSKFEIVYRITKQYRFV*S*LAVQINHYFYRIS*IKR
VDISYRLFGIVGKHCP

>GCiWno479_m09.b1 CHROMAT_FILE: GCiWno479_m09.b1 PHD_FILE: GCiWno479_m09.b1.phd.1
           CHEM: term DYE: big TIME: Mon Oct 15 11:33:18 2001
           TEMPLATE: GCiWno479_m09 DIRECTION: fwd
          Length = 888

 Score =  236 bits (596), Expect(2) = 5e-66
 Identities = 105/108 (97%), Positives = 107/108 (98%)
 Frame = +2

Query: 1   PDMTHQKHMPYLRAFVQEVHRYCTIAPFSIPHCVTEDCVLFGYHIPKSTPVVSNIWRVHN 60
           PDMTHQKHMPYLRAFVQEVHRYCTIAPFSIPHCVTEDCVLFGYHIPKSTPV+SNIWRVHN
Sbjct: 326 PDMTHQKHMPYLRAFVQEVHRYCTIAPFSIPHCVTEDCVLFGYHIPKSTPVMSNIWRVHN 505

Query: 61  DPKYWKNPEKFSPERHLDLEGRFVPSNRVLPFAVGQRRCVGEQMAKVG 108
           DP+YWKNPEKFSPERHLDLEGRFVPSNRVLPFAVG RRCVGEQMAKVG
Sbjct: 506 DPEYWKNPEKFSPERHLDLEGRFVPSNRVLPFAVGHRRCVGEQMAKVG 649


 Score = 36.4 bits (82), Expect(2) = 5e-66
 Identities = 14/16 (87%), Positives = 16/16 (99%)
 Frame = +3

Query: 106 KVGLFLFWASFLQKCE 121
           ++GLFLFWASFLQKCE
Sbjct: 642 RLGLFLFWASFLQKCE 689

>GCiWno479_m09.b1_1
MLSVHARIFFSVLVCVINPT*NIPIC*SILQKYVKKTLRIRMYIAYLYS*HKICPYGLFI
L**GRGSLEHNIQIS*PCFKKNNNPLYYTITHNQQTYPR*ELAYR*FRTRYDTSKTHAVS
SCFCTRSPQILHHSSVQYSPLRH*RLRSLWLPHTEVDTGDEQYMESPQRPGILEKSGEIF
P*TSLRFRRSIRSI*SCSAVRCRP*TLRWRTNGKGWVCFYSGLHFCRNAKITLTLTLVYL
VGRKNLSGTVRSXQEFTIKVRKSLQNN*TV*IRIKLLAVQINITFFIIPNLNVLIS
>GCiWno479_m09.b1_2
CYRYTREYSLVF*SAL*IQHEIFQFAKAYYKNMLKKLYV*ECI*LIYIVNTKFAPTVYLY
YSRVGDLWNIISKYPDRVLKKITTHSTIL*HIINKLTHVKNLHIGNSEPDMTHQKHMPYL
RAFVQEVHRYCTIAPFSIPHCVTEDCVLFGYHIPKSTPVMSNIWRVHNDPEYWKNPEKFS
PERHLDLEGRFVPSNRVLPFAVGHRRCVGEQMAKVGSVSILGFIFAEMRKSH*L*LWFT*
LEERTFLEPCDLHRSLQSKFENRYRITKQYRFX*SYLLYK*TLLFLSYLT*TC*Y
>GCiWno479_m09.b1_3
VIGTRENIL*CFSLRYKSNMKYSNLLKHITKIC*KNFTYKNVYSLFI*LTQNLPLRFIYI
IVG*GIFGT*YPNILTVF*KK*QPTLLYYNT*STNLPTLRTCI*VIPNQI*HIKNTCRIF
VLLYKKSTDIAP*LRSVFPTASLKTAFSLVTTYRSRHR**AIYGESTTTRNIGKIRRNFP
LNVT*I*KVDSFHLIVFCRSLSAIDAALENKWQRLGLFLFWASFLQKCENHIDSDFGLPS
WKKEPFWNRAIXTGVYNQSSKIVTE*LNSIDSXKVTCCTNKHYFFYHT*PKRADI

>SEQUENCE 71 NEW 74% TO SEQ 29 39% TO 2C9
MLDILLSCIRAWFSTITLSIIV
FYVTWHYWNKRTPGSPPGPRGFPFIGAITSIRKHPEHVMTKWNKEYGPVCMVRLGFKDVL
VIGSYEAAHEAYVKSQDFLDRPSPFGLEILGGGYGLFPIAYGSFHQEQRRFGLNTLREHG
MXTKVLESTILXYAXGACDRLETKMSAPVLLDQEVYIAVSSTIAHMXVGHNTMXDAXSFV
I
>GCiWno534_n18.g1 CHROMAT_FILE: GCiWno534_n18.g1 PHD_FILE: GCiWno534_n18.g1.phd.1
           CHEM: term DYE: big TIME: Thu Oct 18 11:46:28 2001
           TEMPLATE: GCiWno534_n18 DIRECTION: rev
          Length = 914

 Score =  235 bits (593), Expect = 2e-61
 Identities = 109/112 (97%), Positives = 110/112 (97%)
 Frame = +3

Query: 1   PPGPRGFPFIGAITSIRKHPEHVMTKWNKEYGPVCMVRLGFKDVLVIGSYEAAHEAYVKS 60
           PPGPRGFPFIGAITSIRKHPEHVMTKWNKEYGPVCMVRLGFKDVLVIGSYEAAHEAYVKS
Sbjct: 408 PPGPRGFPFIGAITSIRKHPEHVMTKWNKEYGPVCMVRLGFKDVLVIGSYEAAHEAYVKS 587

Query: 61  QDFLDRPSPFGLEILGGGYGLFPIAYGSFHQEQRRFGLNTLREHGMGRRVLE 112
           QDFLDRPSPFGLEILGGGYGLFPIAYGSFHQEQRRFGLNTLREHGM  +VLE
Sbjct: 588 QDFLDRPSPFGLEILGGGYGLFPIAYGSFHQEQRRFGLNTLREHGMXTKVLE 743

>GCiWno534_n18.g1_3
WDNVVCISSRSV*TKKPKGQKPHIVYYM*IKRQTYAAL*GFYPCAIGSAFLKRYILYCYC
AV*LSL*YLYS*NYYRSTYRAVVLYKYPKFELALIGIKMLDILLSCIRAWFSTITLSIIV
FYVTWHYWNKRTPGSPPGPRGFPFIGAITSIRKHPEHVMTKWNKEYGPVCMVRLGFKDVL
VIGSYEAAHEAYVKSQDFLDRPSPFGLEILGGGYGLFPIAYGSFHQEQRRFGLNTLREHG
MXTKVLESTILXYAXGACDRLETKMSAPVLLDQEVYIAVSSTIAHMXVGHNTMXDAXSFV
I*SY

Opp end of clone = seq 34 
>GCiWno534_n18.b1_4
EPSDRGISSTAF*TRWTNVNEKTRSRQQVKCSYR*F*LNADAHICTGSVSCFYRP*LTVS
RLDAGITAVCVLWTTP*LKFNGLSNLNCQPCIISISLFFFSAETPSENHPPSKWQRSKQR
*RR*RFQRED*SELGNLFVV**PTTRVHGE*ENIKGVATTLILSQLNVNLFLSVVVFQQL
WLCRYIKVPTHFES*KL*AAIKYCGLMFTPIKFPV*INVSI*IYNLYPVAVKRYRSATFF
LPEPTQRPLQLVGSSCSSANTRMYNGGCKKRLMT**GRMASRSWRSRKGCLSPEL*YR*R
VRL
>GCiWno534_n18.b1_5
GTVRSRDFIDSFLNEMDKRKRKNSKQATGKVFI*VILIKCRRPYMHR*RFLLL*TIANSI
EARRWYNGGLCVMDNTXIKI*WAVESKLSAMYYFNIFVLLLRRNSVRKPPPFKMATE*AK
ITTIKISKGRLIRTGKLIRRLVTNNSCPW*VREHKRCSDHAYSLPIKCKSVFKCSRVSTT
VVVSLYKSSNPL*KLKTLSSYKILRIDVYTN*VPRLDQCIDINI*LIPRCCETVQVRDLF
LAGTDTTSATTCWIILFLCKYPDVQRRMQKEIDDVIGENGIPKLALAERLPFTRAVIQVK
G*IX
>GCiWno534_n18.b1_6
NRQIEGFHRQLFERDGQT*TKKLEAGNR*SVHIGNFN*MPTPIYAQVAFLASIDHS*QYR
GSTLV*RRFVCYGQHXN*NLMGCRI*TVSHVLFQYLCSSSPQKLRQKTTPLQNGNGVSKD
NDDKDFKGKIDPNWETYSSFSDQQLVSMVSERT*KV*RPRLFSPN*M*ICF*V*SCFNNC
GCVAI*KFQPTLKVENFKQL*NIAD*CLHQLSSPFRSMYRYKYITYTPLL*NGTGPRPFS
CRNRHNVRYNLLDHLVPLQIPGCTTEDAKRD**RDRGEWHPEVGARGKVAFHQSCNTGKG
LDX

>SEQUENCE 72, 86 
EFQLLVFLRDLFIAGTETTTSTLRWALLVLLHNPGVQDKLRNEIHKVLGQSTTVSMAHRESMPYTRAFIEEIYRY 
RTLTPLDLFHETSGELNISGYKIPKNTVIIPNLWAVHNDRDVWDEPS 
KFKPERHLDEKGNFVQSKHVIPFSVGPRHCLGEQLARMEIFIFLVSMVQKF 
GFLPDPNEPNLPEINHGVNATAFVAYPFNIVANQV
DEV12038.x1
LQW190562.x1 I-HELIX
GCiWno824_n04.b1
LQW242955.y2 = DLFHETSGELNI
LQW47566.x1 = DLFHETSGELNI
LQW242955.y1 = DLFHETSGELNI

>GCiWno824_n04.b1
ATATTTTCCACTGTGTTTTTAGGAATCTTATATCCAGATATATTCAACTCTCCCGACGTTGCATGAAATAGGTCCAAAGG
TGTGAGAGTTCGGTATCTATAAATTTCCTCTATAAATGCTCGCGTATAAGGCATGCTCTCTCTGTGTGCCATACTGACAG
TCGTTGACTGGCCTATGTAAAGTAAACAGGTATCGGTAAGTATACGTGTTATATTGTTTGTACAGGCACTAAGCTACTTT
GGTGTCATTCTGTTTTTTACCCATATGTCCCAAAATACCTGTATTGTGGTTTTCTAATAAAAACATAAAGTAAAATGGGG
TAAGACGGGACACCTGTAGGACATACCATCCAAATATCCTGATCGTGTTTTAAACAATTAAAACGGTCTATGAGAGTTAT
GGGGATACCGTTTTATAATTCTTTGAATGATCTTTTTTACTACTAAATGGGACGAGAAAATAGAATGAAAAGGTGCCCAT
TTCCCACTACCCTACTATATTGCAGTGACGAAACCTAAAACTTTGTGAATTTCATTCCGTAGCTTGTCTTGTACTCCAGG
ATTGTGAAGCAGAACCAGCAACGCCCACCTCAAAGTACTCGTTGTGGTTTCAGTGCCAGCAATGAATAAATCCCTCAAAA
ACACGAGCAACTGAAACTCCTGCAAGGATTTTATTACTTAATCAATTTGTCTTGCGTCTGTTTTACCCTCCCGCGAGTTT
TGGAGTTTCGGCGTGGAAATAATATTGTTATAATTGGTTCCTCTCGCGTATAGCGTATAGAGTAAATTGATCCCGCCTAC
GCTTGTTTTGCAC

>GCiWno824_n04.b1_4
VQNKRRRDQFTLYAIRERNQL*QYYFHAETPKLAGG*NRRKTN*LSNKILAGVSVARVFE
GFIHCWH*NHNEYFEVGVAGSASQSWSTRQATE*NSQSFRFRHCNIVG*WEMGTFSFYFL
VPFSSKKDHSKNYKTVSP*LS*TVLIV*NTIRIFGWYVLQVSRLTPFYFMFLLENHNTGI
LGHMGKKQNDTKVA*CLYKQYNTYTYRYLFTLHRPVNDCQYGTQREHALYASIYRGNL*I
PNSHTFGPISCNVGRVEYIWI*DS*KHSGKY
>GCiWno824_n04.b1_5
AKQA*AGSIYSIRYTREEPIITILFPRRNSKTRGRVKQTQDKLIK**NPCRSFSCSCF*G
IYSLLALKPQRVL*GGRCWFCFTILEYKTSYGMKFTKF*VSSLQYSRVVGNGHLFILFSR
PI***KRSFKEL*NGIPITLIDRFNCLKHDQDIWMVCPTGVPSYPILLYVFIRKPQYRYF
GTYG*KTE*HQSSLVPVQTI*HVYLPIPVYFT*ASQRLSVWHTERACLIREHL*RKFIDT
ELSHLWTYFMQRRES*IYLDIRFLKTQWKIX
>GCiWno824_n04.b1_6
CKTSVGGINLLYTLYARGTNYNNIISTPKLQNSREGKTDARQID*VIKSLQEFQLLVFLR
DLFIAGTETTTSTLRWALLVLLHNPGVQDKLRNEIHKVLGFVTAI**GSGKWAPFHSIFS
SHLVVKKIIQRIIKRYPHNSHRPF*LFKTRSGYLDGMSYRCPVLPHFTLCFY*KTTIQVF
WDIWVKNRMTPK*LSACTNNITRILTDTCLLYIGQSTTVSMAHRESMPYTRAFIEEIYRY
RTLTPLDLFHATSGELNISGYKIPKNTVENX

>SEQUENCE 73 48% TO 2C9
132 ALVKQGEDFAGRPKSPLFDMLTNGCGIVFVDGEKWKAQRKFGIMTLRRY 278
DEV12431.x1 
DEV35102.x1 
DEV35102.x4 

>SEQUENCE 79, 215, 157 60% TO 2C8
409 WTSVAVIAVSLFYIWWRRPHNFPPGPRGLPLIGVLPFLGRFPGEVFKKW 263
262 SLEYGPVMSIRMGRSDVVV 206
366 DFFLAGSETTSTNILWILLLLVHYPEHTAKVIKEIDTIIG 488
THSSQMPFTCAFIQESMRYRTSVPLGAQHYCQKTFQLNGYTIPKGTL (0)
IYPNIWGVHNDPKSWPNPS
DEV46638.x1 I-helix
LQW279985.x1 I-helix
LQW268448.y1 I-helix 
LQW268448.x1 N-TERM
LQW261925.y1 I-helix 
LQW150256.y1 I-helix
LQW273875.y1 N-TERM
LQW252666.y1 N-TERM
GCiWno979_d10.g1

>GCiWno979_d10.g1
TCAGCTGGACCCAGATGGACACAGATAGAACATAATATCCTAAATAAATTAGAAAGTGCCGGGATACATTACAATTATAG
TAGGGTGGGGTAAGATAGGATACTTTAAGCACCTAATATCCAAATATCCTAAACGTTTCAAACAATTAACAATGGTCTAT
GGAAGTAGTGAGGATACGCTTTTATAATTCTTTAAATGTGTTTTTTTGTTTACTACCAAATCGGACAAAAATAGAAAAAA
AATGTATGATATTTTTTACATTACTATACCTATACAGGACCAAATGCATCCGCCAGTTCCACAACGCATAGCTCACAAAT
GCCATTTACTTGCGCATTCATTCAGGAGTCCATGAGGTATCGCACAAGTGTGCCACTAGGCGCCCAGCACTATTGTCAGA
AAACTTTTCAGTTGAACGGCTACACAATACCGAAAGGAACACTGGTAAGATAGATTTACATCGTATACGTATATAGGATA
GTCGCAAAAAAAGTTTGTTACTAATACATACTAGTAACAACGCTGCACGTTATACAACTTGGGTAATGATAAACCAATAT
TACTACAGCGTTTTTTAAAGTTATAAGCTCACCAGACCAGTATACGAGAACATGTTAAGTTATTTATATATCAAGATAAA
GTGTCTAAAAATGGCCAATATTGTGTCGGCGTCGTACAATTTATACACCAACAAAAATACATATACATTGTAACTCATAA
GCGGGCCAGAGGTGTATGAAACAGGACACCCGTGTTATAAAGACTGTCGTTGCACCTGAAACATTTATTACAACAAAACA
TTTCAGATATACCCCAATATATGGGGGTGTCCACAACGATCCTAAATCTTGGCCGAACCCATCATAGTTTGAA

>GCiWno979_d10.g1_1
SAGPRWTQIEHNILNKLESAGIHYNYSRVG*DRIL*APNIQIS*TFQTINNGLWK**GYA
FIIL*MCFFVYYQIGQK*KKNV*YFLHYYTYTGPNASASSTTHSSQMPFTCAFIQESMRY
RTSVPLGAQHYCQKTFQLNGYTIPKGTLVR*IYIVYVYRIVAKKVCY*YILVTTLHVIQL
G***TNITTAFFKVISSPDQYTRTC*VIYISR*SV*KWPILCRRRTIYTPTKIHIHCNS*
AGQRCMKQDTRVIKTVVAPETFITTKHFRYTPIYGGVHNDPKSWPNPS*FE
>GCiWno979_d10.g1_2
QLDPDGHR*NIIS*IN*KVPGYITIIVGWGKIGYFKHLISKYPKRFKQLTMVYGSSEDTL
L*FFKCVFLFTTKSDKNRKKMYDIFYITIPIQDQMHPPVPQRIAHKCHLLAHSFRSP*GI
AQVCH*APSTIVRKLFS*TATQYRKEHW*DRFTSYTYIG*SQKKFVTNTY**QRCTLYNL
GNDKPILLQRFLKL*AHQTSIREHVKLFIYQDKVSKNGQYCVGVVQFIHQQKYIYIVTHK
RARGV*NRTPVL*RLSLHLKHLLQQNISDIPQYMGVSTTILNLGRTHHSL
>GCiWno979_d10.g1_3
SWTQMDTDRT*YPK*IRKCRDTLQL**GGVR*DTLST*YPNILNVSNN*QWSMEVVRIRF
YNSLNVFFCLLPNRTKIEKKCMIFFTLLYLYRTKCIRQFHNA*LTNAIYLRIHSGVHEVS
HKCATRRPALLSENFSVERLHNTERNTGKIDLHRIRI*DSRKKSLLLIHTSNNAARYTTW
VMINQYYYSVF*SYKLTRPVYENMLSYLYIKIKCLKMANIVSASYNLYTNKNTYTL*LIS
GPEVYETGHPCYKDCRCT*NIYYNKTFQIYPNIWGCPQRS*ILAEPIIV*

>GCiWno515_f08.b1 CHROMAT_FILE: GCiWno515_f08.b1 PHD_FILE: GCiWno515_f08.b1.phd.1
          CHEM: term DYE: big TIME: Wed Oct 17 10:56:58 2001
          TEMPLATE: GCiWno515_f08 DIRECTION: fwd
          Length = 894

 Score = 84.3 bits (205), Expect = 2e-16
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = +1

Query: 1  DFFLAGSETTSTNILWILLLLVHYPEHTAKVIKEIDTIIG 40
          DFFLAGSETTSTNILWILLLLVHYPEHTAKVIKEIDTIIG
Sbjct: 34 DFFLAGSETTSTNILWILLLLVHYPEHTAKVIKEIDTIIG 153

>GCiWno515_f08.b1
ATACAGGAAGACGAGTTGAATGTTTTGTTTCGTGACTTTTTCCTTGCTGGCTCAGAAACAACAAGCACCAACATATTGTG
GATTCTATTACTGCTTGTTCACTATCCTGAACATACTGCAAAAGTGATTAAAGAAATAGACACCATCATAGGTGGGTACT
GGTGAGATGATGTATAGTAGGGTGGGGTAAGATGGACACAGATAGAACATAATATCCTAAATAAATTAGAAAGTGCCGGG
ATACATTACAATTATAGTAGGGTGGGGTAAGATGGGATACTTTAAGCACCTAATATCCAAATATCCTAAACGTTTCAAAC
AATTAACAATGGTCTATGGAAGTAGTGAGGATACGCTTTTATAATTCTTTAAATGCGTTTTTTTGTTTACTACCAAATCG
GACAAAAATAGAAAAAATGTATGATATTTTTTACATTACTATACCTATACAGGACCAAATGCATCCGCCAGTTCCACAAC
ACATAGCTCACAAATGCCATTTACTTGCGCATTCATCCAGGAGTCCATGAGGTATCGCACAAGTGTGCCACTAGGCGCCC
AGCACTATTGTCAGAAAACTTTTCAGTTGAACGGCTACACAATACCGAAAGGAACACTGGTAAGATAGATTTACATCGCA
TACGTATATAGTCGCAAAAAAAGTTTGTTACTAATACATACTAGTAAATGCGCTGCACGAACAACTGCGGGAGTAATGAT
AAACCAATATTACTACAGCGACTTTTAAAGTTATAAGCTCACCAGACCAGTATACGAAAACATGATGAGCTATTTATATA
TCAAGAATAAGTGTCAGANAATGACCAATATTGTGACGCTGCGTACAATTTATACGCCAACACGATACATATACGTTGTA
AATCATAAGCGGGC

>GCiWno515_f08.b1_1
IQEDELNVLFRDFFLAGSETTSTNILWILLLLVHYPEHTAKVIKEIDTIIGGYW*DDV**
GGVRWTQIEHNILNKLESAGIHYNYSRVG*DGIL*APNIQIS*TFQTINNGLWK**GYAF
IIL*MRFFVYYQIGQK*KKCMIFFTLLYLYRTKCIRQFHNT*LTNAIYLRIHPGVHEVSH
KCATRRPALLSENFSVERLHNTERNTGKIDLHRIRI*SQKKFVTNTY**MRCTNNCGSND
KPILLQRLLKL*AHQTSIRKHDELFIYQE*VSXNDQYCDAAYNLYANTIHIRCKS*AG
>GCiWno515_f08.b1_2
YRKTS*MFCFVTFSLLAQKQQAPTYCGFYYCLFTILNILQK*LKK*TPS*VGTGEMMYSR
VG*DGHR*NIIS*IN*KVPGYITIIVGWGKMGYFKHLISKYPKRFKQLTMVYGSSEDTLL
*FFKCVFLFTTKSDKNRKNV*YFLHYYTYTGPNASASSTTHSSQMPFTCAFIQESMRYRT
SVPLGAQHYCQKTFQLNGYTIPKGTLVR*IYIAYVYSRKKSLLLIHTSKCAARTTAGVMI
NQYYYSDF*SYKLTRPVYENMMSYLYIKNKCQXMTNIVTLRTIYTPTRYIYVVNHKR
>GCiWno515_f08.b1_3
TGRRVECFVS*LFPCWLRNNKHQHIVDSITACSLS*TYCKSD*RNRHHHRWVLVR*CIVG
WGKMDTDRT*YPK*IRKCRDTLQL**GGVRWDTLST*YPNILNVSNN*QWSMEVVRIRFY
NSLNAFFCLLPNRTKIEKMYDIFYITIPIQDQMHPPVPQHIAHKCHLLAHSSRSP*GIAQ
VCH*APSTIVRKLFS*TATQYRKEHW*DRFTSHTYIVAKKVCY*YILVNALHEQLRE***
TNITTATFKVISSPDQYTKT**AIYISRISVRX*PIL*RCVQFIRQHDTYTL*IISG

>SEQUENCE 72, 86 K-HELIX TO PKG 46% TO 2R1 
86 and 18 are almost identical at the C-term from IIPNLWA on
EFQLLVFLRDLFIAGTETTTSTLRWALLVLLHNPGVQDKLRNEIHKVLGF very similar to seq 72
187 MAHRESMPYTRAFIEEIYRYRTLTPLDLFHATSGELNISGYKIPKNTVV 41
IIPNLWAVHNDRDVWDEPSKFKHERHVDEK similar to seq 18 and 23 and seq 1
LQW47566.x1 
LQW242955.y2 
GCiWno1042_c15.b1
GCiWno729_f06.g1 RTLTPLDLFHETSGELNISGYKIPKNTV
GCiWno760_a19.g1 RTLTPLDLFHETSGELNISGYKIPKNTV
GCiWno127_m05.b1 RTLTPLDLFHATSGELNISGYKIPKNTV
GCiWno824_n04.b1 RTLTPLDLFHATSGELNISGYKIPKNTV
GCiWno127_m05.g1 RTLTPLDXFHATSGELNISGYKIPKNTV IIPNLWAVHNDRDVWDEPSKFKHERHVDEK
GCiWno568_j05.g1 RTLTPLDLFHETSGELNISGYKIPK

>GCiWno40_n18.b1 CHROMAT_FILE: GCiWno40_n18.b1 PHD_FILE: GCiWno40_n18.b1.phd.1 CHEM:
           term DYE: big TIME: Sat Sep  1 10:55:00 2001 TEMPLATE:
           GCiWno40_n18 DIRECTION: fwd
          Length = 982

 Score =  205 bits (517), Expect(2) = 3e-73
 Identities = 111/127 (87%), Positives = 112/127 (87%), Gaps = 8/127 (6%)
 Frame = -1

Query: 74  PIFPHPTIYK-YGTVTTMCVILYWILYCVVK-VILLDCKSNFPDIVF-TVDDDETYTATV 130
           PIFPH TIYK YGTVTTMCVILYWILYCVVK VILLDCKSNFPDIVF TVDDDETYTATV
Sbjct: 706 PIFPHXTIYK*YGTVTTMCVILYWILYCVVK*VILLDCKSNFPDIVF*TVDDDETYTATV 527

Query: 131 IIL-IFFVYYQKEQ-MGMKTCPIFP-PTI-Y-QIIPNLWAVHNDRDVWDEPSKFKHERHV 185
           IIL IFFVYYQKEQ MGMKTCPIFP PTI   QIIPNLWAVHND DVWDEPSKFK ERH+
Sbjct: 526 IIL*IFFVYYQKEQ*MGMKTCPIFP*PTI*Y*QIIPNLWAVHNDPDVWDEPSKFKPERHL 347

Query: 186 DEKAVMV 192
           DEK   V
Sbjct: 346 DEKGNFV 326 this seq has the same intron seq but no errors at 
RDVWDEPSKFKHERHV

LQW253263.x1  this seq fits with two others at the E/G and V/A
GCiWno40_n18.b1 has G
GCiWno336_d01.g1 has G
GCiWno1042_c15.g1 has G and A

LQW253263.x1.phd.1 LQW253263.y1 

           12:12:24 2001 TEMPLATE: LQW253263 DIRECTION: fwd
          Length = 866

 Score = 85.8 bits (209), Expect = 5e-17
 Identities = 40/43 (93%), Positives = 40/43 (93%)
 Frame = -1

Query: 1   LVSMVQKFEFLPDPNEPNLPEINHGVNATVFVAYPFNIVANQV 43
           LVSMVQKF FLPDPNEPNLPEINHGVNAT FVAYP NIVANQV
Sbjct: 635 LVSMVQKFGFLPDPNEPNLPEINHGVNATAFVAYPLNIVANQV 507


>GCiWno127_m05.g1_4
LVPVQTI*HVYLPIPVYFT*ASQRLSVWHTERACLIREH**RKFIDTELSHLWTYFMQRR
ES*IYLDIRFLKTQW*NIL**AGEYGTPVHSILSYHLVVNKDNLNSYKTVSSRLQQYSVV
IV*NTIRIFGYCVLKVSPSSPTLPYINNTEQ*LQCV*YYIGFYTV**SR*YC*TVNPIFL
ISCFKQLTMMRRIRLRL*FCKYSLFTTKKNNKWE*KHVPSFPNLLYNIDRSYRIYGRYTT
IVMCGTNQASLNMSAT*MRRQSWSISCFQ*TDGAVMRHSCFQ*NDGQSGHSVSSKRRP
>GCiWno127_m05.g1_5
FSACTNNITRILTDTCLLYIGQSTTVSMAHRESMPYTRALIEEIYRYRTLTPLDXFHATS
GELNISGYKIPKNTVVKYIIVGWGIWDTRSFYFIVPFSSKQRQFK*L*NRVLTTSAI*RC
YCLKHDQDIWILCA*GIPIFPHPTIYK*YGTVTTMCVILYWILYCVVK*VILLDCKSNFP
DIVF*TVDDDETYTATVIIL*IFFVYYQKEQ*MGMKTCPIFP*PTI*Y*QIIPNLWAVHN
DRDVWDEPSKFKHERHVDEKAVMVNIVFPVNRWRSDAS*LFPVKRRPVRS*RFQ*TTAX
>GCiWno127_m05.g1_6
*CLYKQYNTYTYRYLFTLHRPVNDCQYGTQREHALYASINRGNL*IPNSHTFGXISCNVG
RVEYIWI*DS*KHSGKIYYSRLGNMGHPFILFYRTI***TKTI*IVIKPCPHDFSNIALL
LFKTRSGYLDIVCLRYPHLPPPYHI*IIRNSNYNVCNIILDSILCSKVGDIVRL*IQFS*
YRVLNS*R**DVYGYGYNSVNILCLLPKRTINGNENMSHLSLTYYIILTDHTESMGGTQR
S*CVGRTKQV*T*APRR*EGSHGQYRVSSKPMAQ*CVIAVSSKTTASQVIAFPVNDGX


>GCiWno1042_c15.b1 CHROMAT_FILE: GCiWno1042_c15.b1 PHD_FILE: GCiWno1042_c15.b1.phd.1
           CHEM: term DYE: big TIME: Fri Jan  4 11:17:18 2002
           TEMPLATE: GCiWno1042_c15 DIRECTION: fwd
          Length = 826

 Score =  103 bits (255), Expect = 3e-22
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   EFQLLVFLRDLFIAGTETTTSTLRWALLVLLHNPGVQDKLRNEIHKVLGF 50
           EFQLLVFLRDLFIAGTETTTSTLRWALLVLLHNPGVQDKLRNEIHKVLGF
Sbjct: 508 EFQLLVFLRDLFIAGTETTTSTLRWALLVLLHNPGVQDKLRNEIHKVLGF 657

>GCiWno1042_c15.b1 I-helix region 
AACGATCCTCATTTCACGGTTACTATATATGTGCTGTGCCAGAAGCCTGTTTCAGTAACCTAAACTATAGCACTGGTTTC
GTAGAGAGAATTTTGTCCACGCAAAACATTTTTATAGGCATATTCAAAATGTTGAATAATGACCATTTATATTAACTGCA
TGTCTGAATAAATACAAAAGCTATTTTTGTACTTATATGCATGTTCACTCTATTGCATATACATTAACCATTTATCTTAA
CTGCGTAACAGTTTGCTAGCTTTGACTGTAGACTAAATCACTGGCTAAACAATGCCAGTAAAATGCAGTTCCTGAAAATT
ACAACAAAGCACAACAACTGCTGAAAGAGTGGCAAAACAAGCGTAGGCGGGATCAAATTTACTCTATACGCTATACGCGA
GAGGAACCAATTATAACAATAATTATTTCCACGCCGAATACTCCAAAACTCGCGGGGAGGTTAAAACAGACGCAAGACAA
ATTGATTAAGTAATAAAATCCTTGCAGGAGTTTCAGTTGCTCGTGTTTTTGAGGGATTTATTCATTGCTGGCACTGAAAC
CACAACGAGTACTTTGAGGTGGGCGTTGCTGGTTCTGCTTCACAATCCTGGAGTACAAGACAAGCTACGGAATGAAATTC
ACAAAGTTTTAGGTTTCGTCACTGCAATATAGTAAGGGTAGTGGGAGATGGGCACCTTTTCATTCTATTTTCTCGTCCCA
TTTAGTAGTAAAAAGATCATTCAAGAATTTATAAACGTACCCCATACTCTCATAGACCTTTTAATGTTTAAACACATCGG
ATATTTTGATGTATGGTCTACAGTGN
>GCiWno1042_c15.g1 NLWA to end 2 aa diffs with seq 18, 216 these must be adjacent genes in a cluster since 86 and 18 overlap and do not match
TTCGAGCTCGGTACCAAAGAATACATAACCGTAGCTTTACGACTTTAAAAGACGTTGTTAATTGTTTAAAAACGAATGGG
AATATGGGACATTGTTTGTTAAAGAATTACCATCTTACCCCACAGTACTGAATCTACAATATATCTAAACTGTTTAGTTA
CATGCATTAGACTTGATTGGCCACTATGTTAAATGGGTACGCTACAAATGCAGTTGCGTTCACACCGTGATTTATCTCCG
GAAGATTCGGCTCATTCGGATCCGGAAGAAACCCAAATTTCTGAACCATTGAAACCAGAAAGATGAAGATTTCCATTCGA
GCTAGTTGTTCTCCCAAGCAATGACGTGGACCCACCGAGAAAGGTATCACGTGTTTAGACTGAACAAAGTTTCCTTTCTC
ATCGAGGTGACGCTCAGGTTTAAACTTGCTTGGTTCGTCCCACACATCAGGATCGTTGTGTACCGCCCATAGATTCGGTA
TGATCTGTCAATATTATATAGTAGGTTAGGGAAAGATGGGACATGTTTTCATTCCCATTTATTGTTCTTTTTGGTAGTAA
ACAAAGAATATTTACAGAATTATAACCGTAGCCGTATACGTCTCATCATCGTCAACTGTTTAAAACACGATATCAGGAAA
ATTGGATTTACAGTCTAACAATATCACCTACTTTACTACACAGTATAGAATCCAATACAATATTACACACATTGTAGTTA
CTGTTCCGTATTATTATATATGGTAGGGGGGGGGGAAAAATGGGGATACCTTAAGCACACAATATCCAAATATCCTGATC
GTGGTTTTAAACAATAACAACGCTATAATGCTGAAGTCGTGAAGGACCCGGTTTTATAACTATTTGAATTTTCCTGGTTT
ACTACTAAATGGTACCATAAA

GCiWno1042_c15.g1
sequence 18, 216 11 accessions similar to sequence 1 PKG to heme 52% to 2J2
          Length = 500

  Minus Strand HSPs:

 Score = 562 (197.8 bits), Expect = 6.7e-57, P = 6.7e-57
 Identities = 104/106 (98%), Positives = 104/106 (98%), Frame = -1

Query:   484 IIPNLWAVHNDPDVWDEPSKFKPERHLDEKGNFVQSKHVIPFSVGPRHCLGEQLARMEIF 305
             IIPNLWAVHNDPDVWDEPSKFKPERHLDEKGNFVQSKHVIPFSVGPRHCLGEQLARMEIF
Sbjct:   395 IIPNLWAVHNDPDVWDEPSKFKPERHLDEKGNFVQSKHVIPFSVGPRHCLGEQLARMEIF 454

Query:   304 IFLVSMVQKFGFLPDPNEPNLPEINHGVNATAFVAYPFNIVANQV* 167
             IFLVSMVQKF FLPDPNEPNLPEINHGVNAT FVAYPFNIVANQV*
Sbjct:   455 IFLVSMVQKFEFLPDPNEPNLPEINHGVNATVFVAYPFNIVANQV* 500

>GCiWno127_m05.g1
TGGCCGTCGTTTACTGGAAACGCTATGACCTGACTGGCCGTCGTTTTACTGGAAACAGCTATGACGCATCACTGCGCCAT
CGGTTTACTGGAAACACGATATTGACCATGACTGCCTTCTCATCTACGTGGCGCTCATGTTTAAACTTGCTTGGTTCGTC
CCACACATCACGATCGTTGTGTACCGCCCATAGATTCGGTATGATCTGTCAATATTATATAGTAGGTTAGGGAAAGATGG
GACATGTTTTCATTCCCATTTATTGTTCTTTTTGGTAGTAAACAAAGAATATTTACAGAATTATAACCGTAGCCGTATAC
GTCTCATCATCGTCAACTGTTTAAAACACGATATCAGGAAAATTGGATTTACAGTCTAACAATATCACCTACTTTACTAC
ACAGTATAGAATCCAATATAATATTACACACATTGTAGTTACTGTTCCGTATTATTTATATATGGTAGGGTGGGGGAAGA
TGGGGATACCTTAAGCACACAATATCCAAATATCCTGATCGTGTTTTAAACAATAACAACGCTATATTGCTGAAGTCGTG
AGGACACGGTTTTATAACTATTTAAATTGTCTTTGTTTACTACTAAATGGTACGATAAAATAGAATGAACGGGTGTCCCA
TATTCCCCAGCCTACTATAATATATTTTACCACTGTGTTTTTAGGAATCTTATATCCAGATATATTCAACTCTCCCGACG
TTGCATGAAATANGTCCAAAGGTGTGAGAGTTCGGTATCTATAAATTTCCTCTATTAATGCTCGCGTATAAGGCATGCTC
TCTCTGTGTGCCATACTGACAGTCGTTGACTGGCCTATGTAAAGTAAACAGGTATCGGTAAGTATACGTGTTATATTGTT
TGTACAGGCACTAAA


>_5
FSACTNNITRILTDTCLLYIGQSTTVSMAHRESMPYTRALIEEIYRYRTLTPLDXFHATS
GELNISGYKIPKNTVVKYIIVGWGIWDTRSFYFIVPFSSKQRQFK*L*NRVLTTSAI*RC
YCLKHDQDIWILCA*GIPIFPHPTIYK*YGTVTTMCVILYWILYCVVK*VILLDCKSNFP
DIVF*TVDDDETYTATVIIL*IFFVYYQKEQ*MGMKTCPIFP*PTI*Y*QIIPNLWAVHN
DRDVWDEPSKFKHERHVDEKAVMVNIVFPVNRWRSDAS*LFPVKRRPVRS*RFQ*TTA

>SEQUENCE 72 60% TO 2C9
          Length = 40

 Score = 143 (50.3 bits), Expect = 8.1e-13, P = 8.1e-13
 Identities = 29/40 (72%), Positives = 31/40 (77%)

Query:    11 DLFIAGTETPKEFFEVGVVVLLHNPGVQDKLGNEIHKVLG 50
             DLFIAGTET        ++VLLHNPGVQDKL NEIHKVLG
Sbjct:     1 DLFIAGTETTTSTLRWALLVLLHNPGVQDKLRNEIHKVLG 40

>GCiWno127_m05.g1 CHROMAT_FILE: GCiWno127_m05.g1 PHD_FILE: GCiWno127_m05.g1.phd.1
           CHEM: term DYE: big TIME: Wed Sep 12 02:36:30 2001
           TEMPLATE: GCiWno127_m05 DIRECTION: rev
          Length = 895

 Score = 98.3 bits (241), Expect = 3e-20
 Identities = 46/51 (90%), Positives = 47/51 (91%)
 Frame = -1

Query: 47  LGMAHRESMPYTRAFIEEIYRYRTLTPLDLFHETSGELNISGYKIPKNTVV 97
           + MAHRESMPYTRA IEEIYRYRTLTPLD FH TSGELNISGYKIPKNTVV
Sbjct: 820 VSMAHRESMPYTRALIEEIYRYRTLTPLDXFHATSGELNISGYKIPKNTVV 668


>GCiWno760_a19.b1
AACCACTGGTTGATCAAAGTACCGCCAATATCGACTTACAACAAAATGCAAATCAGCAACAGGGACGACATGTTCAGTGA
GTAAACGGTCAAAATATTTTATTTGGATGTGCTATTACCAACAAGCTGTTTTATAAAAACTAAAAAAAAATTATTAACAA
AGTTATACCAACGTGGTAACTCGTAAGCGAGCACGAGCTGCGCGAAACAAAACACAAGTGTTGTAACAAGTGTCGCTGCT
CCGCCATGCGAGGATAAATAGGTTACACCATTCAAGACTTTAACCATAGTATACTGAAATGATAGTATACTCACTTCAGT
ATACTATGCTTTAACGCAGAGACAATAACTTTATACATAAAGTTGGTCGCATAACGTGGTGCAGAACCACCCCTGTTACA
GCGACTGTCGTTTTCACGCCACGCGAGGATAAACAAGCGCCAAATATTTTACATTCATTCACTTACTCAAGTTTCACACT
GACAAATTAGAGTAAAAAAATGAACTTATTGAAAAAAGATAACATAACCATAACTAAAACATAGGTATCCACTTACACGT
TATATGATTGGGTTATCGCAACGGCGTAGGCTTGCTAATTATCTCACTGATTATAATCCAATGCTTATTGTTCAATGCAT
GCANGCCTTTTCCGAGAATTATTGACGAGCATAGAGCGACATTTGACAAAGAAACATTCGTGATTTTATTGACGCCTTCC
NNTGACGTATGGCTGGGAACGATCCTCATTTCACGNTACTATATATGCTGTGCCAGAGCCCTGTTCAGTAACCTAACTAT
AGCACTGGTTTCGTAAAAGAGAATTTTGTCACGCCAAACCTTTTTATAAGCATATTCAAAATGTGGATAATGACCATTNA
TATAACTGCCTGCN
>GCiWno760_a19.g1
TCAGCTCGGACCCTATATATTAGGGTGGGGGAGATGGGGATACCTTTAGCACACAATATCCTGATCGTGTTTTAAACAAT
AACAACGCTATATTGCTGAAGTCGTGAGGACACGGTTTTATAACTATTTGAATTTCCTTGGTTTACTACTAAATGGTACG
ATAAAATAGAATGAACGGGTGTCCCATATTCCCCAGCCTACTATAATATATTTTACCACTGTGTTTTTGGGAATCTTATA
TCCAGATATATTCAACTCTCCCGACGTTTCATGGAATAGGTCCAAAGGTGTGAGAGTTCGGTATCTATAAATTTCCTCTA
TAAATGCTCGCGTATAAGGCATGCTCTCTCTGTGTGCCATACTGACAGTCGTTGACTGGCCTATGTAAAGTAAACAGGTA
TCGGTAAGTATACGTGTTATATTGTTTGTACAGGCACTAAAGCTACTTTGATATCATTCTGTTTTTTACCCATATGTCCC
AAAATACCTGTATTGTGGTTTTCTAATAAGAACATAAAGTAAAATGGGGTAAGACGGGACACCTGTAGGACATACCATCC
AAATATCCTGGTGGTGTTTTACACAATTAAAAGCGGTCTATGAGAGTTATGGGGATACCGTTTTATAATTCTTTGAATGA
TCTTTTTTACTACTAAATGGGACGAGAAAATAGAATGAAAAGGTGCCCATCTCCTACTACCCTACTATATTGCAGTGACG
AAACCTAAAACTTTGTGAATTTCATTCCCTAACTTGTCTTGTACTCCAGGATTGTGAAGCAAAACCACCACGCCCACCTC
AAAGAACTCCTTGGGGGTTTCAGTGCCAGCAATGAATAAATCCCCCCAAAACACGAGCAACTGAAACTCCTGA

>GCiWno760_a19.g1_4
SGVSVARVLGGFIHCWH*NPQGVL*GGRGGFASQSWSTRQVRE*NSQSFRFRHCNIVG**
EMGTFSFYFLVPFSSKKDHSKNYKTVSP*LS*TAFNCVKHHQDIWMVCPTGVPSYPILLY
VLIRKPQYRYFGTYG*KTE*YQSSFSACTNNITRILTDTCLLYIGQSTTVSMAHRESMPY
TRAFIEEIYRYRTLTPLDLFHETSGELNISGYKIPKNTVVKYIIVGWGIWDTRSFYFIVP
FSSKPRKFK*L*NRVLTTSAI*RCYCLKHDQDIVC*RYPHLPHPNI*GPS*
>GCiWno760_a19.g1_5
RSFSCSCFGGIYSLLALKPPRSSLRWAWWFCFTILEYKTS*GMKFTKF*VSSLQYSRVVG
DGHLFILFSRPI***KRSFKEL*NGIPITLIDRF*LCKTPPGYLDGMSYRCPVLPHFTLC
SY*KTTIQVFWDIWVKNRMISK*L*CLYKQYNTYTYRYLFTLHRPVNDCQYGTQREHALY
ASIYRGNL*IPNSHTFGPIP*NVGRVEYIWI*DSQKHSGKIYYSRLGNMGHPFILFYRTI
***TKEIQIVIKPCPHDFSNIALLLFKTRSGYCVLKVSPSPPP*YIGSELX
>GCiWno760_a19.g1_6
QEFQLLVFWGDLFIAGTETPKEFFEVGVVVLLHNPGVQDKLGNEIHKVLGFVTAI**GSR
RWAPFHSIFSSHLVVKKIIQRIIKRYPHNSHRPLLIV*NTTRIFGWYVLQVSRLTPFYFM
FLLENHNTGILGHMGKKQNDIKVALVPVQTI*HVYLPIPVYFT*ASQRLSVWHTERACLI
REHL*RKFIDTELSHLWTYSMKRRES*IYLDIRFPKTQW*NIL**AGEYGTPVHSILSYH
LVVNQGNSNSYKTVSSRLQQYSVVIV*NTIRILCAKGIPISPTLIYRVRAX

>SEQUENCE 88 197251 MID REGION 37% TO 2B6
TVIYSTTSVSSTICFGRSFTRQDPELKEFLRNFQSFDKAMGASQIINFWPFLKYFP 
LQW240272.y1 

>GCiWno3_j02.b1 CHROMAT_FILE: GCiWno3_j02.b1 PHD_FILE: GCiWno3_j02.b1.phd.1 CHEM:
           term DYE: big TIME: Sat Sep  1 10:44:48 2001 TEMPLATE:
           GCiWno3_j02 DIRECTION: fwd
          Length = 887

 Score = 96.7 bits (237), Expect = 4e-20
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = +1

Query: 14  CFGRSFTRQDPELKEFLRNFQSFDKAMGASQIINFWPFLKYFP 56
           CFGRSFTRQDPELKEFLRNFQSFDKAMGASQIINFWPFLKYFP
Sbjct: 448 CFGRSFTRQDPELKEFLRNFQSFDKAMGASQIINFWPFLKYFP 576

>GCiWno3_j02.b1_1
FCI*TYCFTLADDSFGCNNVTYLSLRGG*RQSL*HRCMNMI*NSPKTITHKVTYVVTGRP
KRARGL*NRTPVL*QLSLPRHARINKLHTW*LVSGHEVYETEHPC*RLSLSHHAGIHNLN
NFNYIDFQGLVGDLHDTVIYSTTSVSSTICFGRSFTRQDPELKEFLRNFQSFDKAMGASQ
IINFWPFLKYFPVLGKSFRVISHNYIXGIGGXXGXXXNLFXXXFWLXI KNIQRIIKPCPW
DFHRPGVNCLKHEHGIDIFCAQGW PRFPPPTPRVQNWVLAFLPRVRPPPIIHTVVX
>GCiWno3_j02.b1_2
FVYRLIVLLWRMIHLAVIM*LIYPYVAGNDSPYNTGA*I*YKILPKQ*PTK*HTW*LVGL
SGHEVYETEHPCYNNCRCPVMRG*INYIRGNL*VGTRCMKQNTRVNDCRYPTTREYTT*T
TLITLISRV**ATSTTR*YTAPPA*VPRFVSGEVLQGKTRS*KNFSEIFKVSTKPWARLR
LSTFGHF*NTFRCWESPFG*FPIIILXG*GXXXXTXXIYFXVHFGCXLRTFKEL*NLALG
TFIDPVLIV*NTNTELIYFVLKGGPVSPPPPPGSKIGCWPFYPGSGHRPSFTRWFX
>GCiWno3_j02.b1_3
LYIDLLFYFGG*FIWL**CNLFILTWRVTTVLITQVHEYDIKFSQNNNPQSNIRGNW*A*
AGTRFMKQNTRVITTVVAPSCEDK*ITYVVTCKWARGV*NRTPVLTTVVIPPRGNTQLKQ
L*LH*FPGFSRRPPRHGDIQHHQREFHDLFRAKFYKARPGVERISQKFSKFRQSHGRVSD
YQLLAIFKILSGAGKVLSGNFP*LY*XDRGXXGXLX*SIXXXILVVX*EHSKNYKTLPLG
LS*TRC*LFKTRTRN*YILCSRVAPFPPPHPPGPKLGAGLFTQGQATAHHSHGGL

>GCiWno329_k19.b1 CHROMAT_FILE: GCiWno329_k19.b1 PHD_FILE: GCiWno329_k19.b1.phd.1
           CHEM: term DYE: big TIME: Mon Oct 22 09:47:38 2001
           TEMPLATE: GCiWno329_k19 DIRECTION: fwd
          Length = 920

 Score = 93.6 bits (229), Expect = 3e-19
 Identities = 46/49 (93%), Positives = 46/49 (93%), Gaps = 3/49 (6%)
 Frame = +3

Query: 1   LYIDLLFYFGG-FIWL--CNLFILTWRVTTVLITQVHEYDIKFSQNNNP 46
           LYIDLLFYFGG FIWL  CNLFILTWRVTTVLITQVHEYDIKFSQNNNP
Sbjct: 480 LYIDLLFYFGG*FIWL**CNLFILTWRVTTVLITQVHEYDIKFSQNNNP 626

>GCiWno329_k19.b1_1
XRHPCYNPTVSIILLIDSPEWERQKQCTIKALKLYTSGSDKRSTMEETVSSHAKQLAEDL
INSADQQVTIQFTISALLSKLHT*IHYYIVRWGKMGHLFTRFPRPI***TKNIQ*IMKPN
PHNFHRALLIVQNTIRIFGYYVLKVSYLPPPCYNKMIGKFCI*TYCFTLADDSFGCNNVT
YLSLRGG*RQSL*HRCMNMI*NSPKTITQLSNIRGNW*A*AGTTFMKQNTRVITTVVAPS
CEDNINTYVVTCKLARGV*NRTPVXTTVXIPPRRNTQLKHFNYIXFQGVSRRPPRTGDIQ
HHQREVP
>GCiWno329_k19.b1_2
XDTHVITRQ*A*YF*LTARNGNGRSNAPSRH*NFTQADQTKDQQWKKPYPPMQNNSQRI*
STLQTSR*QYNLLYRLY*VSYIHKYITI**DGGRWDTFSLDFLVPFSSKQRTFNKL*NRI
LTTSIERC*LFKTRSGYLDIMC*RCPIFPHPAIIK*LASFVYRLIVLLWRMIHLAVIM*L
IYPYVAGNDSPYNTGA*I*YKILPKQ*PN*VTYVVTGRPKRARRL*NRTPVL*QLSLPRH
ARIT*IHTW*LVSWHEVYETEHPX*RLSXSHHAGIHNLNTLITXDSRGLVGDLHEPVIYS
TTNGKFX
>GCiWno329_k19.b1_3
KTPML*PDSEHNTFD*QPGMGTAEAMHHQGIETLHKRIRQKINNGRNRILPCKTTRRGFN
QLCRPAGNNTIYYIGFTK*VTYINTLLYSKMGEDGTPFH*ISSSHLVVNKEHSINYETES
SQLP*SVVNCSKHDQDIWILCAKGVLSSPTLL**NDWQVLYIDLLFYFGG*FIWL**CNL
FILTWRVTTVLITQVHEYDIKFSQNNNPTK*HTW*LVGLSGHDVYETEHPCYNNCRCPVM
RG*HKYIRGNL*VGTRCMKQNTRXNDCRYPTTPEYTT*TL*LHXIPGG**ATSTNR*YTA
PPTGSS

>GCiWno444_g16.b1 CHROMAT_FILE: GCiWno444_g16.b1 PHD_FILE: GCiWno444_g16.b1.phd.1
           CHEM: term DYE: big TIME: Fri Oct 12 10:22:42 2001
           TEMPLATE: GCiWno444_g16 DIRECTION: fwd
          Length = 923

 Score =  166 bits (417), Expect = 3e-41
 Identities = 82/82 (100%), Positives = 82/82 (100%)
 Frame = -3

Query: 2   RHPCYNPTVSIILLIDSPEWERQKQCTIKALKLYTSGSDKRSTMEETVSSHAKQLAEDLI 61
           RHPCYNPTVSIILLIDSPEWERQKQCTIKALKLYTSGSDKRSTMEETVSSHAKQLAEDLI
Sbjct: 351 RHPCYNPTVSIILLIDSPEWERQKQCTIKALKLYTSGSDKRSTMEETVSSHAKQLAEDLI 172

Query: 62  NSADQQVTIQFTISALLSKLHT 83
           NSADQQVTIQFTISALLSKLHT
Sbjct: 171 NSADQQVTIQFTISALLSKLHT 106

>GCiWno444_g16.b1_4
V*THHVVWGISSHPCYTLPVGTRCINMLYPDSEHEVYESIMCXGV*XDTHVITRQ*A*GV
*IHHVCLVYK*TXHVIT*Q*ARGV*ICYNPTVSMRCMNTSCVSGV*EDTHVITRQ*A*GV
*IHHVCLVYK*TPML*LDSEHEVYEYVITRQ*A*GV*IHHVCLVYKKTPML*LNSEHELY
EYTMCVWCIRRHPCYNPTVSIILLIDSPEWERQKQCTIKALKLYTSGSDKRSTMEETVSS
HAKQLAEDLINSADQQVTIQFTISALLSKLHT*IHYYIVRWGKMGHLFTRFPRPI***TK
NIQ*IMK
>GCiWno444_g16.b1_5
CMNTPCGLGY**PPMLYLASGHEVYKYVIPRQ*A*GV*IHHVXWCIXRHPCYNSTVSMRC
MNTSCVSGV*VDTPCYNLTVSTRCMNML*PDSEHEVYEYIMCVWCIRRHPCYNSTVSMRC
MNTSCVSGV*VDTHVIT*Q*ARGV*ICYNPTVSMRCMNTSCVSGV*EDTHVITQQ*A*AV
*IHHVCLVYKKTPML*PDSEHNTFD*QPGMGTAEAMHHQGIETLHKRIRQKINNGRNRIL
PCKTTRRGFNQLCRPAGNNTIYYIGFTK*VTYINTLLYSKMGEDGTPFH*ISSSHLVVNK
EHSINYEX
>GCiWno444_g16.b1_6
MYEHTMWFGVLVATHVIPCQWARGV*ICYTPTVSMRCMNPSCVXVYXKTPML*LDSEHEV
YEYIMCVWCISRHXML*LDSEHEVYEYVITRQ*A*GV*IHHVCLVYKKTPML*LDSEHEV
YEYIMCVWCISRHPCYNLTVSTRCMNML*PDSEHEVYEYIMCVWCIRRHPCYNSTVSMSC
MNTPCVSGV*EDTHVITRQ*A*YF*LTARNGNGRSNAPSRH*NFTQADQTKDQQWKKPYP
PMQNNSQRI*STLQTSR*QYNLLYRLY*VSYIHKYITI**DGGRWDTFSLDFLVPFSSKQ
RTFNKL*X

>SEQUENCE 89 RYG TO MID 332% TO 1A1
MDSLVFVLVDTVLVMKYQILLLLVIVYAIKLLAASQSRRLNIPGPYPWPVIGNVIEMGGQPQFSLTNMAK
210 RYGPVYLMKLGTADVLVLNNYEVIKEALLRQRRIFGGRPIFDSFKKISQGLGVVFNSTMT 389
390 QGDEWMKLKMTIVKHVHRFVSSEETKGYVAHHVQMEAVELVRILTEKCRS 539
540 SPNKVIFPIEQINLAIANVVCAIMFGHRYQHGN 638
LQW233975.x1 
LQW215364.y2
f_GECi27_c13
GCiWno151_k07.b1
GCiWno240_b21.g1
GCiWno117_a14.b1
GCiWno82_n13.b1 exon 1
GCiWno155_l18.g1 exon 1
GCiWno658_g08.g1 exon 1
GCiWno82_n13.b1 upstream of gene
GCiWno312_i02.b1 upstream of gene
>GCiWno82_n13.b1 CHROMAT_FILE: GCiWno82_n13.b1 PHD_FILE: GCiWno82_n13.b1.phd.1 CHEM:
           term DYE: big TIME: Sat Sep  1 16:31:00 2001 TEMPLATE:
           GCiWno82_n13 DIRECTION: fwd
          Length = 906

 Score = 67.9 bits (163), Expect = 2e-11
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -2

Query: 1   LNIXGPYPWPVIGNVIEMGGQPQFSLTNMAK 31
           LNI GPYPWPVIGNVIEMGGQPQFSLTNMAK
Sbjct: 119 LNIPGPYPWPVIGNVIEMGGQPQFSLTNMAK 27

>scf/ciona01/G126/seq_dir/hrs/G126P64874R.T0/G126P64874RB5.T0.seq    968      0
            968  ABI
            Length = 968

  Plus Strand HSPs:

 Score = 135 (47.5 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 24/28 (85%), Positives = 25/28 (89%), Frame = +3

Query:    63 IXGPYPWPVIGNVIEMGGQPQFSLTNMA 90
             I GPYPWPVIGNV+EMG QPQ SLTNMA
Sbjct:   225 IPGPYPWPVIGNVVEMGSQPQISLTNMA 308

>scf/ciona01/G126/seq_dir/hrs/G126P64874R.T0/G126P64874RB5.T0.seq_1 968 0    968  ABI
IGTELLWWPAKFLRTHPLCFYRACYYNNF*RSTSKWIS*QPS*LRYALSKYKSLLTLRSC
TPRSGIWGYIKTDQRSRVHIHGQ*SGMWWRWDRSRRFHSPTWQTSKCR*LVNHHCRN*SL
I*QVRSYVSYQARDR*RADP**L*R**KKHLYFHKGCSPAARHLIHSRKPSIGRGIVLNN
TSTQGAAWERMTMTIVKHVHRFIVAPQTKGSLAGHVQKETDQLVRM*SEKCRSSTNQAIE
PVENINLAFANVVCSIMFGHRYQHGNKGIQILNILIYLLLGHRRMCNPVC**QSCIVFLL
SIPNIFRCTCAWGQSQTEVQLTP
>scf/ciona01/G126/seq_dir/hrs/G126P64874R.T0/G126P64874RB5.T0.seq_2 968 0    968  ABI
LELSSCGGLLNFSGLTLFVFTEHAIIIISSDQHQNGYPNSRHNYDMLFQNINHY*PYDRV
PREVVYGVT*RPTKDPGSISMASDRECGGDGIAAADFTHQHGKQVSAGDSLTTTAGINH*
FSRYGPMYLIKLGTADVLILNNYDGNKRSIYTSTRGVLRPPGI*FTQENLA*VEALCSTT
LRRRGRRGNV*R*PS*SMFIDSSWPHKPRAHWLVTCKKKPINWCACDPKNAEALRTKRLS
P*RISILHSQTLYARSCSDIDTNMGIREFRF*IY*YTYCSDTGVCVIQCADSKVALFSFY
PFPTYSDAPVHGDNLKRRFN*PX
>scf/ciona01/G126/seq_dir/hrs/G126P64874R.T0/G126P64874RB5.T0.seq_3 968 0    968  ABI
WN*APVVAC*ISPDSPSLFLQSMLL**FLAINIKMDILTAVITTICSFKI*ITIDLTIVY
PEKWYMGLHKDRPKIPGPYPWPVIGNVVEMGSQPQISLTNMANK*VQVTR*PPLQELITD
LAGTVLCILSSSGPLTC*SLIIMTVIKEAFILPQGVFSGRPAFDSLKKT*HRSRHCAQQH
FDAGGGVGTYDDDHREACSSIHRGPTNQGLTGWSRAKRNRSTGAHVIRKMPKLYEPSD*A
RREYQSCIRKRCMLDHVRTSIPTWE*GNSDFKYIDIPTARTPAYV*SSVLIAKLHCFPFI
HSQHIPMHLCMGTISNGGSIDP
IPGPYPWPVIGNVVEMGSQPQISLTNMA
RYGPMYLIKLGTADVLILNNYDVIKEAF

>GCiWno117_a14.b1_4
MYLALSRKFVLKPXTGLAKFKRWIRGVRAGGHSAGDEIPNPXILVMGLRHKXISNVTVKA
LEHSWSLPVASDRKCDRNGRPTSVFTDKHGEKVSLI*QRYRYHLHLQIYTT*TNKQRNPF
KFLVV*SFTATQPVVLLW*RNFEIIKSNLSF*GEAYSMKL*I*C*TNIYRSM*IVNTFRA
*FS*DMHNLVT*LRLLEFFLLC*VLIQIEIKY*VLCVFGKACYKLIFLTFRYGPVYLMKL
GTADVLVLNNYEVIKEALLRQRRIFGVPPDMPVV*QDSAMTMSGPSFYWKHTMNHDRAVV
LLANRL*PX
>GCiWno117_a14.b1_5
NVFSPXQKIRTKTXYWIGKIQTMDSWCSCWWTQCW**NTKSXYISNGSTP*XY*QRHSQG
A*TFXVLTRGQ*SEM**KWEANLSFH*QTWRKSEFDLTALSLSLTSSNIHHLNEQTEKSI
QVFSCLIFHGNATSCPVMVTQL*NNKVQPIVLRRGLQYETLNLMLNQYL*VHVNREYISC
VILLRYA*SGDITTTVGIFPFMLSFDSD*DKILSTLCVW*SLL*TNLFDFQVRTCVFDET
RNC*RSGAQQL*SHQRSIITSKTHLWCTARYASRLTGFSYDHEWSVVLLETHYEP*SCRR
FTGKQAMTQX
>GCiWno117_a14.b1_6
CI*PXAENSY*NLXLDWQNSNDGFVVFVLVDTVLVMKYQILXY**WVYAIXLLATSQSRR
LNIXGPYPWPVIGNVIEMGGQPQFSLTNMAKK*V*FDSAIAITYIFKYTPLERTNREIHS
SF*LFNLSRQRNQLSCYGNATLK**SPTYRSKERPTV*NFKFDAKPIFIGPCKS*IHFVR
NSLEICIIW*HNYDCWNFSFYVEF*FRLR*NIKYFVCLVKLVIN*SF*LSGTDLCI**NS
ELLTFWCSTIMKSSKKHYYVKDASLVYRQICQSFNRIQL*P*VVRRFTGNTL*TMIVPSF
YWQTGYDPX

>GCiWno240_b21.g1_3
AVVLLETLDLTGRRFTGNSYDLTVR*FTGNMM*RPVYLMKLETADVLVLNNYEVIKEALL
RQRRIFGGRPIFDSFKKISQGRGVVFNSTMTQGDEWMKLKMTIVKHVHRFVSSEETKGYV
AHHVQMEAVELVRILTEKCRSSPNEVIFPIEQINLAIANVVCAIMFGHRYQHGNK VQLTA
CKT*MI*CGLTGLCKTNIDAFDKRRYSRLPVTGRYSEIGSIILILSF*LKLRPIRVSIKT
KSTD*KIGVVKKTNXGNNIHTKIRCPFPNFKLSRGIEWCRLCWRSRDP*IPVCMHHLFD

>SEQUENCE 91 WXXP TO END 39% TO 2R1 on same clone as seq 36 N-term GCiWno609_a01
57% to seq 36 seems to be a pseudogene.  Ends in mid exon, no savignyi ortholog
extra aa in heme signature.  
487 WPQPNKFDPHRHLDSAKKFISSSKIVPFSVGARYYCMGRETAQTEIFVFVVAL 332
LQKFKITRDPTLKWPIHMEDGIQSALCCPSRYKIILN*  216
LQW188730.y1 
LQW92134.y1 
LQW64081.y1 
LQW66533.y1 .X1 = SEQ 36 not same gene (gene cluster?)
GCiWno844_j14.g1 -
GCiWno390_j12.b1 +
GCiWno619_l10.g1 -


>GCiWno844_j14.g1_4
RDMEW*TYSFATIN**YLLRIQQ*NLVLLITVTYIRRVVAV*VRYSR*SYKLVSRPTASY
MYFL*RFYIFFMLGLEALNRCTHV*SIVGYKRGMSLVP*SYIS*SCEPLTTFFERRSYGY
IILGYLSPQYPNIISIVFYTFNKGLLESWGYNFIFL*MFFVYYTMRRENRMKNCPIFPPK
TRTLLQFTLTM*SSRRLYSKYSEGRKLATTKQV*PSQTLRFCEEIYLLEQNCAFFGRCTL
LLYGAGNCSNRNFCICRRSFTEI*NNS*SDFEMANSHGRWYTICMCWYRARID
>GCiWno844_j14.g1_5
GYGVVNLFVRYD*LIIPSPYSAVKFSSAYNSHIYTPCGSGLS*I*QVEL*AGIKAYSKLH
VFSVAILYIFYARTRGVKSLYTCIKYCGV*KRDVVSTLKLYFLIV*TIDNIF*EAELRLY
NSGIPFATISKYYLDRILYI*QGSIGVVGIQFYISLNVLCLLHNETRK*NEKLSHLPTQD
TNIAPVYPHDVIIA*AI*QILRRA*TGHNQTSLTLTDT*ILRRNLSPRAKLCLFRSVHVI
IVWGGKLLKPKFLYLSSLFYRNLK*LVIRL*NGQFTWKMVYNLHVLVPSSN*X
>GCiWno844_j14.g1_6
GIWSGKLIRSLRLINNTFSVFSSEI*FCL*QSHIYAVW*RFKLDIAGRVISWYQGLQQAT
CIFCSDFIYFLCSDSRR*IAVHMYKVLWGIKEGCR*YLKAIFLNRVNH*QHFLRGGATVI
*FWDTFRHNIQILSRSYFIHLTRVYWSRGDTILYFFECSLFTTQ*DEKIE*KIVPSSHPR
HEHCSSLPSRCNHRVGYIANTQKGVNWPQPNKFDPHRHLDSAKKFISSSKIVPFSVGARY
YCMGRETAQTEIFVFVVALLQKFKITRDPTLKWPIHMEDGIQSACVGTELELX

First walk upstream
>GCiWno793_o16.b1 CHROMAT_FILE: GCiWno793_o16.b1 PHD_FILE: GCiWno793_o16.b1.phd.1
           CHEM: term DYE: big TIME: Tue Dec  4 11:35:10 2001
           TEMPLATE: GCiWno793_o16 DIRECTION: fwd
          Length = 819

 Score =  111 bits (274), Expect = 8e-24
 Identities = 62/72 (86%), Positives = 63/72 (87%), Gaps = 5/72 (6%)
 Frame = +3

Query: 86  YKLVSRPTASYMYFL--RFYIFFMLGLEALNRCTHV-SIVGYKRGMSLVP-SYIS-SCEP 140
           YKLVSRPTASYMYF   RFY FFMLGLEALNRCT+V SIVGYKRGMSLVP SYIS SCE Sbjct: 321 YKLVSRPTASYMYFYL*RFYRFFMLGLEALNRCTYV*SIVGYKRGMSLVP*SYIS*SCEQ 500

Query: 141 LTTFFERRSYGY 152
           LTTFFE RSYGY
Sbjct: 501 LTTFFETRSYGY 536

>GCiWno793_o16.b1_1
THLVVNKKRSNNYKNVSSRLLYRPFLIAYKTRSGYLNIMCLSVLLSGFDDMVISAITAG*
*VVNLFVRYD*LIIPFSYSAGEI*FCL*QSHIYAVW*RFKLDIAGRVISWYQGLQQATCI
FTCSDFIDFLCSDSRR*IAVHMYKVLWGIKEGCR*YLKAIFLNRVNN*QHFLRRGATVI*
LWDTFRHNIQILSRSYFKHLTRVYWSRGDTILYFFECSLFTTQ*DEKIEWKIVPSSHPRH
EHCSSLPSRCNRRVGP*AI*QILRRA*TGTHQQ
>GCiWno793_o16.b1_2
PIW**TKNVQIITKTYPHDSYIDRF*LHIKHDRDI*ILCA*AFYYLVLMIWLLVL*PRDN
EW*TYSFVTIN**YLSRIQQVKFSSAYNSHIYTPCGSGLS*I*QVEL*VGIKAYSKLHVF
LPVAIL*IFYARTRGVKSLYICIKYCGV*KRDVVSTLKLYFLIV*TIDNIF*DAELRLYN
SGIPFATISKYYLDRILNI*QGSIGVVGIQFYISLNVLCLLHNETRK*NGKLSHLPTQDT
NIAPVYPHDVIVA*GRRLYSKYSEGRKLAHTN
>GCiWno793_o16.b1_3
PFGSKQKTFK*LQKRILTTPI*TVFNCI*NTIGIFEYYVLKRFIIWF**YGY*CYNRGIM
SGKLIRSLRLINNTFLVFSR*NLVLLITVTYIRRVVAV*VRYSR*SYKLVSRPTASYMYF
YL*RFYRFFMLGLEALNRCTYV*SIVGYKRGMSLVP*SYIS*SCEQLTTFFETRSYGYIT
LGYLSPQYPNIISIVF*TFNKGLLESWGYNFIFL*MFFVYYTMRRENRMENCPIFPPKTR
TLLQFTLTM*SSRRAVGYIANTQKGVNWHTPT

Second walk
>GCiWno266_m04.g1 CHROMAT_FILE: GCiWno266_m04.g1 PHD_FILE: GCiWno266_m04.g1.phd.1
           CHEM: term DYE: big TIME: Wed Oct  3 13:13:00 2001
           TEMPLATE: GCiWno266_m04 DIRECTION: rev
          Length = 884

 Score =  104 bits (258), Expect = 1e-22
 Identities = 52/57 (91%), Positives = 52/57 (91%)
 Frame = +3

Query: 1   THLVVNKKRSNNYKNVSSRLLYRPFLIAYKTRSGYLNIMCLSVLLSGFDDMVISAIT 57
           THLVVNKKRSNNYKNVSSRLLYRPFLIA  TRSGYLNIMCL  LLSGFDDMVI AIT
Sbjct: 714 THLVVNKKRSNNYKNVSSRLLYRPFLIAXXTRSGYLNIMCLKRLLSGFDDMVIXAIT 884

>GCiWno266_m04.g1_1
WPSFYWKRLT*LAVVLLETAMT*LAVLLLKDRYEYTLNMRSDGDSLYLSNGHALMARLHN
LTTRIKERGDRIKTDLSELDLHTQNARVLLYSALEEGQAIKEEIDRLGRELRRHRDERRD
FIRRMTENED*TTFFYPFI*IIGTLELRLMRNILRKCTNMQSRVRIH*SSLRS*SFYFFY
TIHSTQTRHNL*RVFANVISALFYLQLSARAE**I*VYRKYSRPYMVGEDRSSFYSFRPI
W**TKNVQIITKTYPHDSYIDRF*LHXXHDRDI*ILCA*SVYYLVLMIWLLXL*P
>GCiWno266_m04.g1_2
GRRFTGNA*PDWPSFYWKQL*HDWPSYY*KTDMNIH*I*DPMAILCI*VTGML*WRDCTT
SQPG*RSEVTG*KRICQNLICTRRMLECFFTLLLKKARR*KKK*IASEGSFVAIATNGET
L*EE*LKTKTEQPFFTLLYK*SVHLN*G**EIYLENVLICNQELEYTKAH*DHRVFISSI
QFIAHKLDTTYNECLRT**VRFFTYSYQQERNNKYRYTESIVGPIWWGKIGHHFIPFDPF
GSKQKTFK*LQKRILTTPI*TVFNCIXXTIGIFEYYVLKAFIIWF**YGYXCYNX
>GCiWno266_m04.g1_3
AVVLLETLDLTGRRFTGNSYDMTGRPITERQI*IYTKYEIRWRFSVFE*RACFNGETAQP
HNQDKGAR*PDKNGFVRT*FAHAEC*SASLLCS*RRPGDKRRNRSPRKGASSPSRRTERL
YKKND*KRRLNNLFLPFYINNRYT*IKADEKYT*KMY*YAIKS*NTLKLIKIIEFLFLLY
NS*HTNSTQLITSVCERNKCAFLLTAISKSGIINIGIQKV**ALYGGGR*VIILFLSTHL
VVNKKRSNNYKNVSSRLLYRPFLIAXXTRSGYLNIMCLKRLLSGFDDMVIXAIT

Third walk

>GCiWno464_p17.g1 CHROMAT_FILE: GCiWno464_p17.g1 PHD_FILE: GCiWno464_p17.g1.phd.1
           CHEM: term DYE: big TIME: Mon Oct 15 09:59:49 2001
           TEMPLATE: GCiWno464_p17 DIRECTION: rev
          Length = 906

 Score =  134 bits (335), Expect = 3e-31
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = -1

Query: 36  NMRSDGDSLYLSNGHALMARLHNLTTRIKERGDRIKTDLSELDLHTQNARVLLYSALEEG 95
           NMRSDGDSLYLSNGHALMARLHNLTTRIKERGDRIKTDLSELDLHTQNARVLLYSALEEG
Sbjct: 309 NMRSDGDSLYLSNGHALMARLHNLTTRIKERGDRIKTDLSELDLHTQNARVLLYSALEEG 130

Query: 96  QAIKEEI 102
           QAIKEEI
Sbjct: 129 QAIKEEI 109

>GCiWno464_p17.g1_4
XPVV*PDISXNXHS*TSYTTSPVQYNITIDPKASVYSGCIYTIHHALCQNKNIGVRITSF
VLQTT**EINVKEL*RPLKTYNLSRFEYKHVIIL*HGQKLKRQSSWLA*DTTVTIIWLYC
RLKT*LSLKARKITSYFYWYVCLKNLTIRIL*YDNNIMHFT*HFTRINTPQQHKQITLF*
ESNLEW*PILARLKIGIYGNMRSDGDSLYLSNGHALMARLHNLTTRIKERGDRIKTDLSE
LDLHTQNARVLLYSALEEGQAIKEEIDRLGRELRRHRDGRRDFIRRMTENED*TTYFYAF
I*
>GCiWno464_p17.g1_5
XRSLT*YFYXPPFVDELYYFTRTI*YHH*PKSVGVFGMYIHYTSCTXPKQKHRSQNYLIC
IADHLIRN*RKGIIKTP*DIQFIAF*I*TRHYSMTRTKTEATVVMACLGHDCHNNLVVLQ
AKDVIVIKSA*NYIVFLLVCMS*ESHNTNIVI*QQHYAFYVTFHSYKYTSTT*TNHFVLR
IKS*MVTYPSSIEDWDIRKYEIRWRFSVFE*RACFNGETAQPHNQDKGAR*PNKNGFVRT
*FAHAEC*SASLLCS*RRPGDKRRNRSPRKGASSPSRRTKRLYKKND*KRRLNNLFLRFY
IX
>GCiWno464_p17.g1_6
XP*SDLIFLXTXIRRRAILLHPYNIISPLTQKRRCIRDVYTLYIMHXAKTKT*ESELPHL
YCRPLDKKLT*RNYKDPLRHTIYRVLNINTSLFYDTDKN*SDSRHGLLRTRLSQ*SGCIA
G*RRNCH*KRVKLHRIFIGMYVLRISQYEYCNMTTTLCILRNISLV*IHLNNINKSLCFK
NQILNGNLS*LD*RLGYTEI*DPMAILCI*VTGML*WRDCTTSQPG*RSEVTE*KRICQN
LICTRRMLECFFTLLLKKARR*KKK*IASEGSFVAIATDEETL*EE*LKTKTEQPIFTLL
YX

fourth walk
>GCiWno18_a15.b1 CHROMAT_FILE: GCiWno18_a15.b1 PHD_FILE: GCiWno18_a15.b1.phd.1 CHEM:
           term DYE: big TIME: Sat Sep  1 07:43:42 2001 TEMPLATE:
           GCiWno18_a15 DIRECTION: fwd
          Length = 883

 Score = 85.4 bits (208), Expect(2) = 6e-31
 Identities = 43/52 (82%), Positives = 46/52 (87%), Gaps = 2/52 (3%)
 Frame = -1

Query: 21  VQYNITIDPKASVYSGCIYTIHHALCQNKNIGVRITSFVLQTT--EINVKEL 70
           VQYNITI+PKA V  GCIYTI HALCQNKNIGV+ITSFVLQ+T  EINVKEL
Sbjct: 310 VQYNITIEPKALVLFGCIYTIQHALCQNKNIGVKITSFVLQST**EINVKEL 155


 Score = 69.9 bits (168), Expect(2) = 6e-31
 Identities = 36/39 (92%), Positives = 36/39 (92%), Gaps = 2/39 (5%)
 Frame = -2

Query: 77  NLSRFEYKHVIIL-HGQKLKRQSSWLA-DTTVTIIWLYC 113
           NLSRFEYKHVIIL H QKLKRQSSWLA DTTVTIIWLYC
Sbjct: 147 NLSRFEYKHVIIL*HRQKLKRQSSWLA*DTTVTIIWLYC 31

>GCiWno18_a15.b1_4
VTSV*HVIAINR*RPVGMND*PMMTSSXVGFSNLMPFSPAXIMPLSNRGSQNHFICNTAK
*SSKTCFSWLNYYTVIFSAVRWIVKYHPVYDTNRQIFVIVFKSYCAVGY*DGYR*NKNPR
IS*PGF*QQTKLFLES*EYDYKRVGTMGQLFISFSCPM***RARHSNMASNRSLT*YFCK
PQS*TS*TTSPYNIISPLNQKRWCYSDVYTLYSMHFAKTKT*ESKLPHLYCRALDKKLT*
RNYKDNLSRFEYKHVIIL*HRQKLKRQSSWLA*DTTVTIIWLYCRLKT*LSLKT
>GCiWno18_a15.b1_5
RHQRLTRHRY*QVTSGRNE*LTYDDVIXRWFQ*SDAFFPGXNHASEQSRKPESLYL*YS*
MKLKNMFFLA*LLYSYFLCGKMDS*IPPGLRYKSPNFRNRF*ELLCGGVLRWIPLE*KSS
NFVTGFLATNKAIFGVMRIRL*KGGDDGTTIYFIFLSYVIVTCSSLKHGIEP*SDLIFL*
TPIVDELDYFTVQYNITIEPKALVLFGCIYTIQHALCQNKNIGVKITSFVLQST**EINV
KEL*RQFIAF*I*TRHYSMTQTKTEATVVMACLGHDCHNNLVVLQAKDVIVIKNX
>GCiWno18_a15.b1_6
SPASDTSSLLTGNVRSE*MINL**RHRPLVSVI*CLFPRQXSCL*AIAEARITLFVIQLN
EAQKHVFLGLTIIQLFSLR*DG*LNTTRSTIQIAKFS*SFLRVIVRWGIKMDTVRIKILE
FRNRVFSNKQSYFWSHENTIIKGWGRWDNYLFHFLVLCDSNVLVTQTWHRTVV*PDISVN
PNRRRARLLHRTI*YHH*TKSVGVIRMYIHYTACTLPKQKHRSQNYLICIAEHLIRN*RK
GIIKTIYRVLNINTSLFYDTDKN*SDSRHGLLRTRLSQ*SGCIAG*RRNCH*KR

Fifth walk 
GCiWno18_a15.g1 CHROMAT_FILE: GCiWno18_a15.g1 PHD_FILE: GCiWno18_a15.g1.phd.1 CHEM:
           term DYE: big TIME: Sat Sep  1 07:43:42 2001 TEMPLATE:
           GCiWno18_a15 DIRECTION: rev
          Length = 944

 Score =  177 bits (444), Expect(2) = 1e-49
 Identities = 87/91 (95%), Positives = 87/91 (95%), Gaps = 3/91 (3%)
 Frame = +1

Query: 27  GFSNLMPFSPAXIMPLSNRGSQNHFICNTAK-SSKTCFSWLNYYTVIFSAVRWIVKYHPV 85
           GFSNLMPFSPA IMPLSNRGSQNHFICNTAK SSKTCFSWLNYYTVIFSAVRWIVKYHPV
Sbjct: 274 GFSNLMPFSPAKIMPLSNRGSQNHFICNTAK*SSKTCFSWLNYYTVIFSAVRWIVKYHPV 453

Query: 86  YDTNRQIFVIVFKSYCAVGY-DGYR-NKNPR 114
           YDTNRQIFVIVFKSYCAVGY DGYR NKNPR
Sbjct: 454 YDTNRQIFVIVFKSYCAVGY*DGYR*NKNPR 546


 Score = 40.6 bits (93), Expect(2) = 1e-49
 Identities = 26/31 (83%), Positives = 26/31 (83%), Gaps = 3/31 (9%)
 Frame = +3

Query: 1   VTSV-HVIAINR-RPVGMND-PMMTSSXVGF 28
           VTSV HVIAINR RPVGMND PMMTSS V F
Sbjct: 186 VTSV*HVIAINR*RPVGMND*PMMTSSAVWF 278

>GCiWno18_a15.g1_1
X*TXL*RHLARTHDKPFSFQIH*IMCGLRNHFCVVS*FPWLCT*VIPCFYAIPIFTAPRT
VTSPASDTSSLLTGNVRSE*MINL**RHRPFGFSNLMPFSPAKIMPLSNRGSQNHFICNT
AK*SSKTCFSWLNYYTVIFSAVRWIVKYHPVYDTNRQIFVIVFKSYCAVGY*DGYR*NKN
PRIS*PGF*QQTKLFLES*EYDYKRVGTMGQLFISXSCPM***RARHSXMASNRSLT*YF
CKPQS*TS*TTSPYNIISPLDPKXWVYSDVYTLYSMHFAKQNIGVKFPSLYCXALDRNYV
KDF*DIYRVFDLTPX
>GCiWno18_a15.g1_2
FKLXCSDI*LVPMINLFLFKFIELCVG*EIISVSFPNSRGCALK*FLVFMQYQFSQHHVP
*RHQRLTRHRY*QVTSGRNE*LTYDDVIGRLVSVI*CPFPRQKSCL*AIAEARITLFVIQ
LNEAQKHVFLGLTIIQLFSLR*DG*LNTTRSTIQIAKFS*SFLRVIVRWGIKMDTVRIKI
LEFRNRVFSNKQSYFWSHENTIIKGWGRWDNYLFHXLVLCDSNVLVTXTWHRTVV*PDIS
VNPNRRRARLLHRTI*YHHWTQSXGCIRMYIHYTACTLPNKT*ESNFPHCIAXHWIEIT*
RIFKTFIAFLI*HLX
>GCiWno18_a15.g1_3
LNXLVATSSSYP**TFFFSNSLNYVWVKKSFLCRFLIPVVVHLSNSLFLCNTNFHSTTYR
DVTSV*HVIAINR*RPVGMND*PMMTSSAVWFQ*SDALFPGKNHASEQSRKPESLYL*YS
*MKLKNMFFLA*LLYSYFLCGKMDS*IPPGLRYKSPNFRNRF*ELLCGGVLRWIPLE*KS
SNFVTGFLATNKAIFGVMRIRL*KGGDDGTTIYFIXLSYVIVTCSSLXHGIEP*SDLIFL
*TPIVDELDYFTVQYNITIGPKAVGVFGCIYTIQHALCQTKHRSQISLIVLXSTG*KLRK
GFLRHLSRF*FNTF

LQW188730.y1 
LQW188730.y1.phd.1 LQW188730.x1 

           13:29:27 2001 TEMPLATE: LQW188730 DIRECTION: rev
          Length = 944

 Score =  282 bits (656), Expect = 1e-75
 Identities = 86/90 (95%), Positives = 87/90 (96%), Gaps = 1/90 (1%)
 Frame = -2

Query: 1   WPQPDKFDPHRHLDSAKKFISSSEIVPFSVGARY-CMGRETAQTEIFVFVVALLQKFKIT 59
           WPQP+KFDPHRHLDSAKKFISSS IVPFSVGARY CMGRETAQTEIFVFVVALLQKFKIT
Sbjct: 445 WPQPNKFDPHRHLDSAKKFISSSKIVPFSVGARYYCMGRETAQTEIFVFVVALLQKFKIT 266

Query: 60  RDPTLKWPIHMEDGIQSALCCPSRYKIILN 89
           RDPTLKWPIHMEDGI SALCCPSRYKIILN
Sbjct: 265 RDPTLKWPIHMEDGIPSALCCPSRYKIILN 176

>LQW188730.y1
>lcl|LQW188730.y1 CHROMAT_FILE: LQW188730.y1 PHD_FILE: LQW188730.y1.phd.1 CHEM:
term DYE: ET TIME: Wed Aug 22 13:29:27 2001 TEMPLATE: LQW188730 DIRECTION: rev 
GCGGAGACTAACTAGCCTGCACCCTGGTGAGACAGCCCAGTACTCTTCATAAGTGAAAATTCATGCTTACACCAATATTA

AGTTTAGAACACTATTTTTATTGTCACGAAAACGTTGTATTATTACGCCACGAAAAAGATTGAAAGTTTAAATAAATATC

TATTATGCGTCTCTAGTTCAGGATTATCTTATACCGACTGGGACAACACAATGCAGATGGTATACCATCTTCCATGTGAA

TTGGCCATTTCAAAGTCGGATCACGAGTTATTTTAAATTTCTGTAAAAGAGCGACGACAAATACAAAAATTTCGGTTTGA

GCAGTTTCCCGCCCCATACAATAATAACGTGCACCGACCGAAAAAGGCACAATTTTGCTCGAGGAGATAAATTTCTTCGC

AGAATCTAAGTGTCTGTGAGGGTCAAACTTGTTTGGTTGTGGCCAGTTTACGCCCTTCTGAGTATTTGCTATATAGCCTA

CGCGATGATTACATCGTGAGGGTAAACTGGAGCAATGTTCGTGTCTTGGGTGGGAAGATGGGACAATTTTTCATTCTATT

TTCTCGTCTCATTGTGTAGTAAACAAAGAACATTCAAAGAAATATAAAATTGTATCCCCACGACTCCAATAGACCCTCTG

TTAATGTATAAAATACGATCGAGATAATATCTGGATATTGTGGCGAAAGGTACCCAGAATTATTAACCGTAGCTCGNCTC

TCAAAAATGTGTCCATGTTCACCGATTAGAAATTAGCTTAGGTACTACGACATCTCTTTATACCCACATACTATACTGTT

ACGCATTAAGCTCAGTCGAATAAAATTTAATGTAGGAAAATGTGTGCGAGCTGAACATTAACACGGATTACTACGCACCG

GTATTCCGTTGCACATCCGGACAAGATATAGGAAATCCACGGTGAACTGAAACAAATCCTAGCC

>LQW188730.y1_4
LGFVSVHRGFPISCPDVQRNTGA**SVLMFSSHTFSYIKFYSTELNA*QYSMWV*RDVVV
PKLISNR*TWTHF*EXSYG**FWVPFATISRYYLDRILYINRGSIGVVGIQFYISLNVLC
LLHNETRK*NEKLSHLPTQDTNIAPVYPHDVIIA*AI*QILRRA*TGHNQTSLTLTDT*I
LRRNLSPRAKLCLFRSVHVIIVWGGKLLKPKFLYLSSLFYRNLK*LVIRL*NGQFTWKMV
YHLHCVVPVGIR*S*TRDA**IFI*TFNLFRGVIIQRFRDNKNSVLNLILV*A*IFTYEE
YWAVSPGCRLVSLR
>LQW188730.y1_5
ARICFSSPWISYILSGCATEYRCVVIRVNVQLAHIFLH*ILFD*A*CVTV*YVGIKRCRS
T*ANF*SVNMDTFLRXELRLIILGTFRHNIQILSRSYFIH*QRVYWSRGDTILYFFECSL
FTTQ*DEKIE*KIVPSSHPRHEHCSSLPSRCNHRVGYIANTQKGVNWPQPNKFDPHRHLD
SAKKFISSSKIVPFSVGARYYCMGRETAQTEIFVFVVALLQKFKITRDPTLKWPIHMEDG
IPSALCCPSRYKIILN*RRIIDIYLNFQSFSWRNNTTFS*Q*K*CSKLNIGVSMNFHL*R
VLGCLTRVQAS*SPX
>LQW188730.y1_6
G*DLFQFTVDFLYLVRMCNGIPVRSNPC*CSARTHFPTLNFIRLSLMRNSIVCGYKEMS*
YLS*FLIGEHGHIFEXRATVNNSGYLSPQYPDIISIVFYTLTEGLLESWGYNFIFL*MFF
VYYTMRRENRMKNCPIFPPKTRTLLQFTLTM*SSRRLYSKYSEGRKLATTKQV*PSQTLR
FCEEIYLLEQNCAFFGRCTLLLYGAGNCSNRNFCICRRSFTEI*NNS*SDFEMANSHGRW
YTICIVLSQSV*DNPELETHNRYLFKLSIFFVA**YNVFVTIKIVF*T*YWCKHEFSLMK
STGLSHQGAG*LVSA

Try to go downstrream and then jump back upstream
>GCiWno609_a01.g1_1
                              FELGTRYYCMGRETAQTEIFVFVVALLQKFKITRDPTLKWPIHMEDGIQSALCCSSRYKI
                              ILN*RRIINIYLKLSIFFVA***NVFVTKIVFKSLILGVRH*IYKLMEELHGLVVNQGII
                              VLAVTQMCTDHCFNSFVTKMHMLKGLKCDAPXCRG

>GCiWno609_a01.b1_5 P450 N-term this matches seq 36 must be a gene cluster
                              KXN*FESLIVVNVELVQMLYAYIYSXVSQ*YT*CLISICHIVSICFIDRSIKCR*IICSL
                              CLKFFS*TPAFLQPSLY*SITVNDLGRQFFLRLDKKSRVFKI*IRYIYFNFIYIDYRIYI
                              LY*LF*F*MH*FFNFFYFKLLDIKATA MASVLTVVGDYLNIWSIVLGGSALIFYMWSRKG
                              NLPPGPRGYPILGAMPYLVVHPEKVITKWSREIYGPILSVPLLNRTIIYLNTYEAITEAF
                              SKQGLKLAGRPYMFLFHQISSDLGITIKHX

LQW92134.y1 

           CHEM: term DYE: ET TIME: Fri May  4 12:18:08 2001
           TEMPLATE: LQW92134 DIRECTION: rev
          Length = 526

 Score =  150 bits (346), Expect(2) = 1e-73
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = -3

Query: 46  FVFVVALLQKFKITRDPTLKWPIHMEDGIQSALCCPSRYKIILN 89
           FVFVVALLQKFKITRDPTLKWPIHMEDGIQSALCCPSRYKIILN
Sbjct: 350 FVFVVALLQKFKITRDPTLKWPIHMEDGIQSALCCPSRYKIILN 219

 Score =  147 bits (339), Expect(2) = 1e-73
 Identities = 45/46 (97%), Positives = 45/46 (97%), Gaps = 1/46 (2%)
 Frame = -1

Query: 1   WPQPDKFDPHRHLDSAKKFISSSEIVPFSVGAR-YCMGRETAQTEI 45
           WPQPDKFDPHRHLDSAKKFISSSEIVPFSVGAR YCMGRETAQTEI
Sbjct: 487 WPQPDKFDPHRHLDSAKKFISSSEIVPFSVGARYYCMGRETAQTEI 350

LQW66533.y1 

           CHEM: term DYE: ET TIME: Wed Apr  4 14:59:20 2001
           TEMPLATE: LQW66533 DIRECTION: rev
          Length = 738

 Score =  150 bits (347), Expect(2) = 2e-41
 Identities = 47/50 (94%), Positives = 47/50 (94%)
 Frame = +2

Query: 40  TAQTEIFVFVVALLQKFKITRDPTLKWPIHMEDGIQSALCCPSRYKIILN 89
           TAQTEI   VVALLQKFKITRDPTLKWPIHMEDGIQSALCCPSRYKIILN
Sbjct: 68  TAQTEI-CIVVALLQKFKITRDPTLKWPIHMEDGIQSALCCPSRYKIILN 214

 Score = 39.2 bits (85), Expect(2) = 2e-41
 Identities = 12/13 (92%), Positives = 12/13 (92%), Gaps = 1/13 (7%)
 Frame = +3

Query: 28 FSVGARY-CMGRE 39
          FSVGARY CMGRE
Sbjct: 30 FSVGARYYCMGRE 68

>LQW92134.x1
>lcl|LQW92134.x1 CHROMAT_FILE: LQW92134.x1 PHD_FILE: LQW92134.x1.phd.1 CHEM:
term DYE: ET TIME: Fri May 4 12:17:36 2001 TEMPLATE: LQW92134 DIRECTION: fwd 
AAAATTTATGAAGCTAAAAATGTGCCTTTCAGTATTTCTAGCTATGTAAGGGAAAAATCCACTTCATATAATGCAAATTA

AAATTGGCCATTTAAGATGAATGCACTGCTGCCTTTCACCATAAATGACCAAACCATTATTCTTTTCAAATATCATTGAA

TTTATGTGTGGGTTGAGAAATCATTTCTGTGTCGTTTCCTAATTCCCGTGGTTGTGCACTTAAGTAATTCCTTGTTTTTA

TGCAATACCAATTTTCACAGCACCACGTACCGTGACGTCACCAGCGTCTGACACGTCATCGCTATTAACAGGTAACGTCC

GGTCGGAATGAATGATTAACCTATGATGACGTCATCGGCCGTTTGGTTTCAGTAATCTGATGCCCTTTTCCCCGGCAAAA

ATCATGCCTCTGAGCAATCGCGGAAGCCAGAATCACTTTATTTGTAATACAGCTAAATGAAGCTCAAAAACATGTTTTTC

TTGGCTTAATTATTATACAGTTATTTTCTCTGCGGTAAGATGGATAGTTAAATACCACCCGGTCTACGATACAAATCGAC

AAATTTTCGTAATCGTTTTTAAGAGTTATTGTGCGGTGGGGTATTAAGATGGATACC

>_1
                              KIYEAKNVPFSISSYVREKSTSYNAN*NWPFKMNALLPFTINDQTIILFKYH*IYVWVEK
                              SFLCRFLIPVVVHLSNSLFLCNTNFHSTTYRDVTSV*HVIAINR*RPVGMND*PMMTSSA
                              VWFQ*SDALFPGKNHASEQSRKPESLYL*YS*MKLKNMFFLA*LLYSYFLCGKMDS*IPP
                              GLRYKSTNFRNRF*ELLCGGVLRWIP
                              >_2
                              KFMKLKMCLSVFLAM*GKNPLHIMQIKIGHLR*MHCCLSP*MTKPLFFSNIIEFMCGLRN
                              HFCVVS*FPWLCT*VIPCFYAIPIFTAPRTVTSPASDTSSLLTGNVRSE*MINL**RHRP
                              FGFSNLMPFSPAKIMPLSNRGSQNHFICNTAK*SSKTCFSWLNYYTVIFSAVRWIVKYHP
                              VYDTNRQIFVIVFKSYCAVGY*DGYX
                              >_3
                              NL*S*KCAFQYF*LCKGKIHFI*CKLKLAI*DECTAAFHHK*PNHYSFQISLNLCVG*EI
                              ISVSFPNSRGCALK*FLVFMQYQFSQHHVP*RHQRLTRHRY*QVTSGRNE*LTYDDVIGR
                              LVSVI*CPFPRQKSCL*AIAEARITLFVIQLNEAQKHVFLGLIIIQLFSLR*DG*LNTTR
                              STIQIDKFS*SFLRVIVRWGIKMDT
                              >_4
                              YPS*YPTAQ*LLKTITKICRFVS*TGWYLTIHLTAEKITV**LSQEKHVFELHLAVLQIK
                              *FWLPRLLRGMIFAGEKGIRLLKPNGR*RHHRLIIHSDRTLPVNSDDVSDAGDVTVRGAV
                              KIGIA*KQGIT*VHNHGN*ETTQK*FLNPHINSMIFEKNNGLVIYGERQQCIHLKWPILI
                              CII*SGFFPYIARNTERHIFSFINF
                              >_5
                              VSILIPHRTITLKNDYENLSICIVDRVVFNYPSYRRENNCIIIKPRKTCF*ASFSCITNK
                              VILASAIAQRHDFCRGKGHQITETKRPMTSS*VNHSFRPDVTC**R*RVRRW*RHGTWCC
                              ENWYCIKTRNYLSAQPRELGNDTEMISQPTHKFNDI*KE*WFGHLW*KAAVHSS*MANFN
                              LHYMKWIFPLHS*KY*KAHF*LHKFX
                              >_6
                              GIHLNTPPHNNS*KRLRKFVDLYRRPGGI*LSILPQRK*LYNN*AKKNMFLSFI*LYYK*
                              SDSGFRDCSEA*FLPGKRASDY*NQTADDVIIG*SFIPTGRYLLIAMTCQTLVTSRYVVL