41 CHICKEN SEQS. 21 are full length
NOT YET FOUND 2B, 2D, 2E, 2F, 2S (probably mammal specific
subfamilies)
5A, 8A, 21, 26B, 26C, 27B (probably rare transcripts)
NOTE: CHICKEN HAS CYP39, not seen in fish
The yellow regions were found by students in a bioinformatcs class
MSCI814 at UT
>CYP1A5 Gga.617 found by Leslie Hunt, Michael Mohler, Wei Liu
MGPEEVMVQASSPGLISATEVLVAAATFCLLLLLTQTRRQHAPK
GLRSPPGPRGLPMLGSVLELRKDPHLVLTRLSRKYGDVMEVTIGSRPVVVLSGLETIK
QALVRQAEDFMGRPDLYSFRHITDGQSLTFSTDTGEMWKARRKLAQNALKNFSIAASP
TASSSCLLEEHVSTEASYLVTKFLQLMEEKQSFDPYRYMVVSVANVICAICFGKRYDH
DDQELLSVVNVVDEFVDVTAAGNPADFIPLLRYLPSRNMDSFLDFNKRFMKLLQTAVE
EHYQTFDKNNIRDVTDSLIEQCVEKKAEANGATQIPNEKIINLVNDIFGAGFDTVTTA
LSWSLMYLVTYPHMQKKIQAELDQTIGRERRPRLSDRGMLPYTEAFILEMFRHSSFMP
FTIPHSTTRDTVLNGYYIPKDRCVFINQWQVNHDEKLWKDPQAFNPERFLNAEGTEVN
KVDAEKVMTFGLGKRRCIGENIGKWEVFLFLSTLLQQLEFSIQDGKKADMTPIYGLSM
KHKRCEHFQVKKRFSMKSSN
>CYP1A4 Gga.618
MAAGPQAAMEQASSPGLISATEVLVAAATFCLLLLLTQTRRQHA
PKGLRSPPGPRGLPMLGNVLELRKDPHLVLTRLSRKYGDVMEVTIGSRPVVVLSGLET
IKQALVRQAEDFMGRPDLPSWQYVSNGHSLAFSYECGDAWKARRKLAQNALKTFSIAA
SPTASSSCLLEEHVSTEASYLVTKFLQLMEEKQSFNPNSYLMVSVANVICAICFGKRY
DHDDQELLSVVNMNTEFGDVAAAGNPADFIPLLRYLPNRAMAAFKDVNARFSAFVQKI
VQNHYSTFDKEHIRDVTDSLIGHCQEKRTGEDVRVQPSDESIISIVNDLFGAGFDTVT
TALSWCMMYAALYPHIQKKIQAELDQTIGRERRPRLSDRGMLPYTEAFILEAFRHSSL
LPFTIPHCTTKDTVLNGYYIPKDTCVFINQWQANHDEKIWKDPPSFKPERFLNAAGTE
LSRTEADKVLIFGLGKRRCIGESIGRWEVFLFLTTILQQLEISLAPGQRVDITPQYGL
TMKYKQCECFQMKKRFPSKGSA
>CYP1B1
72% to human found by Ajit Narang BU113337 BU290505 BU315485
SRDMMDAFIRLQREQPRLQLEHVPATVTDIFGASQDTLSTALLWLLIFLIRY
PKVQAKMQEEVDRIVGRDRLPCAEDQPHLPYIVAFLYESMRFSSFVPVTIPHATTTNTFI
MGYLIPKDTVIFVNQWSVNHDPAKWSNPEDFDPTRFLDENGFINKDLTSSVMIFSMGKRR
CIGEELSKVQLFLFTSILVHQCHFTANPNEDPKMDYTYGLTIKPKPFTLNVTLRDTMELL
DKAVQRLQAEKTANEN*
>CYP1B
LIKE CC285424 Gallus gallus genomic clone Length = 1161
C-TERM
EXON 86% TO CYP1B1 CHICKEN
TMGNRWCIERELYKVQLFVFTSILVHQCHFTANPNE
DLKMDYTYGLTIKRKPFTLNVTLRDSMELLDKAVQRLQAEKTGNEN*
>BU263491
59% to 1C2
RNDRFGQTVGAGSLVDVLPWLLRFPNPVRHVYRDFQALNRELHGFVQAKVAQHRQTFDWR
AVRDISDVMIASVERGGGSPDGLGPEDVEGAMTDIFGAGQDTTSTALSWIILLLLKHPQV
QQDLQAELDRVVGRSRLPTAEDRPHLPLLEAFIYETLRYSSFVPITIPHATTADVELEGF
RIPKGTVVFVNQWSVNHDCSKWPEPQRFDPTRFLDKQQRLDRERAGSVMIFSAGQRRCIG
DQLSKLQIFLFTXILLHQCSFHANPAEHLTMDCIHGAGAEATAFHRQRAAEGSPG
>M64537.1
Gallus gallus cytochrome P450 (CYPIA-2) mRNA, partial cds.
66%
to 1A5 PIY to end 100% match PNE to LVT 100% match
53%
to 1A4
KFLQIAVEEHYQSFDKNNIRDVTDSLWRSKKTKPRGAAD
PNEKIINLVNDIFGAGFDTVTTALSWSLMYLVTQPHSQKKIQESELDTAIGRERRSWLSERSM
LPYKEAFILETVPTWQFVPFTIPHSTTRDTTLNGFHIPKECCVFVNQWQVNHEAELWE
DPFVFRTERFLTDDSTAIDKTLSEKVMGKQVGLAWKSALGTRQWEVSFYLSTLTPNWS
SAPGGESKKDRVRPIYGLSMKHKRCEHFQVKKRFSMKSSN*
>CYP2G like
BU386444 BX260862 BG711105 BI391656 BX273337 BU249330
57% to 2G1 rat
and 57% to 2G2P human found by M. Nooh
MEVTAALLLFLGLSLVVLLAVRGRGGSGGGGRLPPGPTPLPLIGNLLQISPSQTLK
SLLKLRDKYGPVFTVYLGTRRVVVLCGHEAVHEALVGHAEEFAGRGRMPTV
ERTFHGHGVVFANGERWKQLRRFSLTVLRDFGMGRHSLEGPIQEEAQCLVQEMRNTQGKP
FDPTYMLSRAVSNIICAMVFGKRFDYNDAELLELLQMMNESFREISTPAAQLYEMSETLL
QYFPGPQDKIYALLESMRSFIARRVRCNAQSLEPSNPRDFIDCFLLQME
KEKNNPNSEFTMENLELTALNLFFAGTETISSTLRYAFVLLMKNPSVLEKVHAEIDAVIG
>CYP2C45
gallus gallus (chicken) AJ430584 AJ430583
found by Fei Cao, Jie Shen, Lei Yang, Senhua Yu, Stephanie
Nance, Y. Zhuang, Yi Jin
MLLLGAASVVLLVCVACLLSIVQWRKRTGKGKMPEGPTPLPIVG
NILEVKPKNLAKTLEKLAEKYGPVFSVQLGSTPVVVLSGYEAVKEALIDRADEFAARG
HMPIGDRANKGLGIIFSNNEGWLHVRRFALSTLRNFGMGKRSIEERIQEEAEHLLEEI
TKTKRLPFDPTFKLSCAVSNVICSIVFGKRYDYKDKKFLSLMNNMNNTFEMMNSRWGQ
LYQMFSYVLDYLPGPHNNIFKEIDAVKAFVAEEVKLHQASLDPSAPQDFIDCFLSKMQ
EEKDNPKSHFHMTNLITSTFDLFIAGTETTSTTTRYGLLLLLKYPKIQEKVQEEIDRV
VGRSRRPCVADRTQMPYTDAVVHEIQRFITLIPTSLPHAVTKDIHFRDYIIPKGTTVM
PLLSTALYDSKEFPNPTEFNPGHFLNQNGTFRKSDFFIPFSAGKRICPGEGLARMEIF
LLLTAILQNFTLKPVISPEELSITPTLSGTGNVPPYYQLCAIPR
>CYP2H1 chicken PIR P05180 55% to 2C8 found
by Senhua Yu
1 MDFLGLPTIL LLVCISCLLI AAWRSTSQRG
KEPPGPTPIP IIGNVFQLNP WDLMGSFKEL
61 SKKYGPIFTI HLGPKKIVVL YGYDIVKEAL
IDNGEAFSGR GILPLIEKLF KGTGIVTSNG
121
ETWRQLRRFA LTTLRDFGMG KKGIEERIQE EAHFLVERIR KTHEEPFNPG KFLIHAVANI
181
ICSIVFGDRF DYEDKKFLDL IEMLEENNKY QNRIQTLLYN FFPTILDSLP GPHKTLIKNT
241
ETVDDFIKEI VIAHQESFDA SCPRDFIDAF INKMEQEKEN SYFTVESLTR TTLDLFLAGT
301
GTTSTTLRYG LLILLKHPEI EEKMHKEIDR VVGRDRSPCM ADRSQLPYTD AVIHEIQRFI
361 DFLPLNVPHA VIKDTKLRDY FIPKDTMIFP LLSPILQDCK EFPNPEKFDP GHFLNANGTF
421 RRSDYFMPFS AGKRICAGEG LARMEIFLFL TSILQNFSLK PVKDRKDIDI SPIITSLANM
481 PRPYEVSFIP R
>CYP2H2 chicken PIR P20678 57% to 2C18 Gga.802 Links M25469.1
phenobarbital-inducible
found by Senhua Yu
1 MDFLGLPTIL LLVCISCFLI AAWRSTSQRG
KEPPGPTPIP IIGNVFQLNP WDLMESFKEL
61 SKKYGPIFTI HLGPKKVVVL YGYDVVKEAL
IDNGEAFSGR GNLPLFEKVF KGTGIVTSNG
121
ESWRQMRRFA LTTLRDFGMG KKSIEERIQE EARFLVERIR NTHEKPFNPT VFLMHAVSNI
181
ICSTVFGDRF DYEDKKFLDL IEMLDENERY QNRIQTQLYN FFPTILDYLP GPHKTLIKSI
241
ETVDDFITEI IRAHQESFDA SCPRDFIDAF INKMQQEKEN SYFTVESLTR TTLDLFLAGT
301
GTTSTTLRYG LLILLKHPEI EEKMHKEIDR
VVGRDRSPCM ADRSQLPYTD AVIHEIQRFI
361 DFLPVNLPRA VIKDTKLRDY FIPKDTMIFP LLSPILQDCK EFPNPEKFDP GHFLNANGTF
421 RKSNYFMPFS AGKRICAGEG LARMELFLFL TSILQNFSLK PVKDRKDIDI SPIVTSAANI
481
PRPYEVSFIP R
chicken
NW_060416.1|Gga8_WGA225_1
five CYP2J sequences chromosome 8
>CYP2J24P
15504220
DSMKRQWLNFFKSIVGQQQLHCADYMKRRKPKDFPPSPFSFPFLGNV*FMFAKDPVVATQK 15504038
15503534
IIEEHGDIFSMQVGTQSFVIVNGLPLIKEALVTQGENFMDRPEIPMNAEVFSKL 15503385
15503168
GLLSSNGHL*KQQRRFTLTTL*NLGLGKRSLEERIQKECQFLTDAFRDEQ 15503019
15501515
GNPFNPHLKVNNAVSNVICSITFGNWFEYHDKDFQNLLQLMDETATFYGKIMNQ 15501354
gap
15501024
PNGSDFCGDNLVLCTLDLFFAGTETTSTTIRWALLFMAIYPEIQ 15500893
gap
15498733
GKRACLGELLARVEIFLFFTSLLQKFTFQAPPDTILDVKFTMGITLAPQPYKICAVPR 15498560
>CYP2J23
15510424
MLRFLWDSISLQMLFVFLLVFLLVSDYMKRRKPKDFPPSPFSFPFLGNVQFMFAKDPVVATQK 15510236
15509668
XXEKLGDIFSMQAGSQSFVIVNGLPLIKEALVTQGENFMDRPEIPLDTDIFSKL 15509519
15509300
GLISSSGHLWKQQRRFTLTTLRNFGLGKRSLEERIQEECRFLTEAFRDEQ 15509151
15508915
GNPFNPHLKINNAVSNIICSVTFGNRFEYHDENFQTLLRLMDETVTLHEKIMSQ 15508754
15508232
LYNAFPSIVKYLPGSHQTIFKNWRLMKDFVNEKISKHKEDLNPSESRDFIDSYLQEMAK 15508056
15507812
PSGSEFHEENLVACALDLLFAGTETTSTTIRWALLFMAVYPEIQ 15507681
15507221
AHVQAEIDAVIGQARQPALEDRNNMPYTNAVIHEVQRKGNIIPFNVPRQAVKDTVLAGFRVPK 15507033
15506561
GTILIPNLSSVMYDKKEWETPHSFNPGHFLKDGQFWKREAFMPFSI 15506424
15505718
GKRACLGELLARAELFLFFTSLLQKFTFQAPPDTILDFKFTMGITLAPRPYKICAVPR 15505545
>CYP2J22
15518269
MLRFLWDSISLQMLFVFLLVFLLVSDYMKKRKPKDFPPGPFALPFLGNVQLMVAKDPVSTVQK 15518081
15517552
XXEKHGDIFSMQVGSMSFVIVNGLQMIKEALVTQGENFMDRPEFPMNAEVFNKF 15517403
15517205 GLLSSNGHLWKQQRRFTLTTLRNFGLGKRSLEERIQEECRFLTDAFRDEQ 15517056
15515960
GNPFNPHLKINNAVSNVICSITFGNRFEYHDEDFQNLLRLMDETVTLHGKIMSQ 15515799
15514587
LYTFFPSIVKYLPGSHQTVIKNGKLMKDFVCNVISKHKEDLNPSESRDFIDSYLQEMAK 15514411
15514166
PDSSDFCEDNLVSCTLDLFFAGTETTSTTIRWALLFMAMYPEIQ 15514035
15513576
ARVQAEIDAVIGQARQPSLEDRNNMPYTNAVIHEVQRKGNIIPFNALRLTVKDTVLAGFRVSK 15513388
15512873
GTILIPNLSSVMYDKKEWETPHSFNPGHFLKDGQFWKREAFMPFSI 15512736
15512011
GKRACLGELLARAELFLFFTSLLQKFTFQAPPDTILDFKFTMGITLAPRPYKICAVPR 15511838
>CYP2J21
15526022
MLRFLWDSISLQMLFVFLLVFLLVSDYMKKRKPKDFPPGPFSFPFLGNMEFIIAKDPVAVTEK 15525834
15525310
FIEKHGDIFSTQVGSMSFVIVNGLPLIKEALVTQGENFMDRPEFPINTEFLNKF
15524941
GLVFSNGHLWKQQRRFTLTTLRNFGLGKRSLEERIQEECRFLTDAFRDEQ 15524792
15523650
GNPFNPHLKVNNAVSNIICSVTFGNRFEYHDEDFQNLLRLMDETVTLQGEPMSQ 15523489
15522627
LYAFFPSIIKYFPGSHQTVLKNEKLMKRFVCKKISKHKEDLSPSESRDFIDSYLQEMAK 15522451
15522209
KPNGSDFCEDNMVSCTLDLFFAGTETTSTTIRWALLYMAIYPEIQ 15522075
15521605
ARVQAEIDAVIGQARQPSLEDRSNMPYTNAVIHEVQRKGNIIPFNXXXXXXXXXXXXXXXXXX 15521471
15521289
XXLLIPNLSSVMSYKKQWETPHSFNPGHFLKDGQFWNREAFMPFSI 15521158
15520424
GKRACLGELLARAELFLFFTSLLQKFTFQAPPDTILDLKFTVGITLAPQPYKICAVPR 15520251
>CYP2J20 continued joined by EST BI064782.1| first 3 exons from NW_060417.1
1641 MLRFLWDSISLQMLFIFLLVFLLVSDYMKRRKPKDFPPGPFSFPFLGNVQFMFAKDPVVAIQK 1453
943
FIEKHGDIFRTQVGSMSFVIVNGLPLIKEALVTQGENFMDRPEFPTNTEFFNKF 782
574
GLVSSNGHLWKQQRRFTLTTLRNFGLGKRSLEERIQEECRFLTDAFRDEQ 425
GNPFNPHLKVNNAVSNIICSVTFGNRFEYHDEDFQNLLRLMNETAILQGKIMSQ
15531671
LYNFFPSVIKYFPGSHQTVIKNGRLMKRFVCKKISKHKEDLSPSESRDFIDSYLQEMAK 15531495
15531239
PNGRDFCEDNLVACTLDLFFAGTETTSTTIRWALLYMAIYPEIQ 15531108
15530636
ARVQAEIDAVIGQARQPSLEDRSNMPYTNAVIHEVQRKGNIIPFNVPRQAVKDTVLAGFRVPK 15530448
15529975 GTILIPNLSSVMFDMKEWETPHSFNPGHFLKDGQFWKREAFMPFSI 15529838
15529096
GKRACLGELLARAELFLFFTALLQKFTFQAPPDTILDLKFTHGMTLAPQPYMICAVPR 15528923
>CYP2J20
NW_060417.1|Gga8_WGA226_1 Gallus gallus chromosome 8 genomic contig,
may jojn with last seq on upper contig
1641
MLRFLWDSISLQMLFIFLLVFLLVSDYMKRRKPKDFPPGPFSFPFLGNVQFMFAKDPVVAIQK 1453
943
FIEKHGDIFRTQVGSMSFVIVNGLPLIKEALVTQGENFMDRPEFPTNTEFFNKF 782
574
GLVSSNGHLWKQQRRFTLTTLRNFGLGKRSLEERIQEECRFLTDAFRDEQ 425
>CYP2J19 Gallus gallus NW_060417.1weakly like a CYP2J,
52% to 2J2 human
BI390850.1
EST all the best hits are CYP2Js
12644
MDFRFWPISQLGKLNVSMLLVVLVMFLLIIDFVRKRRPRNFPPGPQLFPLVGTIVDLRQPLHLEMQK 12444
10910 LTARYGNIFSVQFGGLTFVVVSGYQMVREALVHQAEIFADRPHIPLLQEIFRGF 10749
10125 GLISSNGHIWRQQRKFVSATLKSIAVSFESKVQEESRYLVEAMEEEK 9985
8514
GQPFDPHYKINSAVSNIICSITFGNRFNYHDSNFQELLHLLAETLLLIGSFWGQ 8299
7615
LYNAFPLIMRWLPGPFRKIFRHWEKLQRFVRGVIAKHKEDLDQSDLGDYIDCYLKEIEK 7439
7077
CKGDTNSYFHEENLLCSTLDLFLTGTETTATAIRWALLYMAAYPHIQ 6937
6401
EKVQLEIDAVIGQCRQPTMEDKEHMPYTSAVLSEVLRMGNIVPLGVPRMSTNDTTLAGFHVPK 6213
5285
GTTLMTSLTSIMFDKNVWETPDTFNPEHFLENGQYRRREAFLPFSA 5148
4669
GKRACPGEQLARTELFIFFTALLQKFTFQAPSATVLSFAFTLSLTRCPKPFQLCALPR 4496
>CYP2J-like BU143341 found by Kun Cheng, A.
Nico West
CD728904 BU118162 BG710067 CC311047 (GENOMIC)
57% to 2J2 42% to 2H2
MLRFLWDSISLQMLFVFLLVFLLVSDYMKKRK
PKDFPPGPFSFPFLGNMEFIIAKDPVAVTEKFIEKHGDIFSTQVGSMSFVIVNGLPLIKE
ALVTQGENFMDRPEFPINTEFLNKF
GLVFSNGHLWKQQRRFTLTTLRNFGLGKRSLEERIQEECRFLTDAFRDEQGNPFNPHLKVNNAVSNIICSVT
FGNRFEYHDEDFQNLLRLMDETVTLQGEPMSQL
YAFFPSIIKYFPGSHQTVLKNEKLMKRFVCKKIS
KHKEDLSPSESRDFIDSYLQEMAKPNGSDFCEDN
MVSCTLDLFFAGTETTSTTIRWALLYMAIYPEIQARVQAEIDAVIGQARQPSLEDRSN
MPYTNAVIHEVQRKGNIIPFNVPRQAVKDTVLAGFRVPKGTILIPNLSSVMYDKKEWETP
HSFNPGHFLKDGQFWKREAFMPFSIGKRACLGELLARAELFLFFTALLQKFTFQAPPDTI
LDLKFTHGMTLAPQPYKICAVPR*
>CD218206
cDNA clone pgr1n.pk006.b19 5' AJ454171 86% to 2J-like
MLRFLWDSI
2 SLQMLFVFLLVFLLVSDYMKRRKPKDFPPSPFSFPFLGNVQFMFAKDPVVATQKLTEKLG
181
182
DIFSMQAGTQSFVIVNGLPLIKEALVTQGENFMDRPEIPLDTDIFSKLGLISSSGHLWKQ 361
362
QRRFTLTTLRNFGLGKRSLEERIQEECRFLTEAFRDEQGNPFNPHLKINNAVSNIICSVT 541
542
FGNRFEYHDENFQNLLRLMDETVTLQGEPMSQL 640
>CC229946
Gallus gallus genomic clone BU457300 BU364406
Length =
1029
57%
to 2J2 52% to 2N10 might be the bottom of CD218206
EDIQALGETAAFVRGVMQNTRRTGP
DQSDLGDYSDCYLKEIEKCKGDTNSYFHEENLLCSTLDLFLTGTETTATAIRWALLYMAAYPHIQ
EKVQLEIDAVIGQ
CRQPTMEDKEHMPYTSAVLSEVLRMGNIVPLGVPRM
STNDTTLAGFHVPKGTTLMTSLTSIMF
DKNVWETPDTFNPEHFLENGQYRRREAFLPFSA
GKRACPGEQVARTELFIFFTALLQKFAFQAPSXXXXXXXXXXXXXXX
PKPFQLCALTRC*
>BU357519
cDNA clone ChEST362n3 5' Length = 821 54% to 2J2 BU313454 BU302565
CD727856 BU131508 BU491829 BU490535
51%
to 2D6, 45% to 2J-like chicken
MTLLLWLSSWSNISVLGVFLTVFTILVDFMKRRKKWSRYPPGPMPLPFVGTMPYVNYYNPHL
SFEKFRKKFGNIFSLQNCWTNVVVLNGYKTVK
EALVNKSEDFADRPYMPVYEHLGYGHKSEGLCLARY
2
GHLWKELRKFTLTTLRNFGMGKKSLEERVTEEAGFLCSAISSEGGHPFDPRFLVNNAVCN 181
182
VICTITYGERFDYGDKTFKKLLTLFENSLNEEAGFLPQLLNVAPVLLRIPGLPQKIFPC 358
359
QKAYVDFTQMLIDKHKETWNPAYIRDFTDAFLKEMAKGKEAEENGFNKSNLTLVTADLLV 538
539
AGSETTATTLRWAFLFMLLYPEIQSKVHKEIDKVIGRNRPPTMADQVNMPYTNAVIHEVQRFGDVVPM 741
GLPHMTYRDTELQGFFIPK
>BX269834
cDNA CC255621 genomic clone 54% to Gga.7041
18aa
in a row with 2W1 (50%) BU233174 BG711234 AJ445737
MAFLISFISDPVLMGLLCAAVLLAVLYF
STGSKNAAFKLPPGPTPLPIIGNLHLVDIRRQDKSLMK
LAEEYGPVFTLHFGFQKVVVLTGYEVVREALVN
YTEEFVDRPSIPIFDQIQNGNGVFFSIGDLWRTTRRFTVSSM
RNLGMGKQMMEGKVCEELHFLIEKIKSFKGEPFSLRSFSIAPINITFLMLFGDRFDYKDP
TFLTLLRLIDEVMVLL
GSPYLNYFNFYPFLGFLFKTHKILLKKIEDVRVIIRQYMKASREDISENSVRSYTDA
LVFKQHEEKNKKDSLFHDDNLIASILDLVMAGTETTATTLQWAILLMMKYPEIQKKVQEE
IGRTVKAGSWVTYEDRKNMPFTNAVIHEVQRFITLLPHVPRCTAVDTHFRGYFLPKGIIV
IP
>CYP2U1
related BU329140 found by Payal.Khandelwal
EGSVIVPNLISRWTEILIFEENPDDFQPTRFLDENGQIIKKEAFIPFGMGKRVCMGEQLAK
MELFLIFTSLMQSFTFLYPENATKPSMEGRFGLTLAPCPFKIIALER*
>Gga.7041 Links 58% TO 2K11 FUGU 57% to 2AC1P human 56% to 2AC1
mouse
LENVKEVNDFIKVTFTKYLQVLDKNDQRSFIDAFLVKQQEQNEKANKFFDDENLTEVVRN
LFTAGMDTTATTLRWGLLLMMKYPEIQKKVQ
REEIDRVIGSNPPRTEHRTKMPYTDAVIHEIQRFANILPLNLPHETTMDVTIKGYFIPKG
186
TYIIPLLNSVLQDKTQWEKPCSFHPEHFLNSEGKFVKKDA
FIPFSAGRRICAGETLAKMELFLFFTSLLQRFTFQPPPGISSSDLDLSAPPRFVIAP
VTHEVCAVSRS*
>CYP2AC1
chicken NW_060338.1|Gga3_WGA147_1
chr 3 XM_420052.1
BG641890.1
EST
3967773
MDWASVVPVGLLMILILLLILKTQDFWRSQGKFPPGPQPLPIIGNLHIMDLKKIGQTMLQ (0) 3967952
3968877
LSETYGPVFTVQMGMRKVVVLSGYDTVKEALVNHADAFVGRPKIPIVEKAGKGK 3969038
3969203 GVVFSSGENWKVMRRFTLTTLRDFGMGKKAIEDYVVEEYGYLADVIESQK 3969352
3970285
GKPLEMTHLMNSAVANVIVSILLGKRFEYEDPTFKRLVSLINENMRLFGSPSVS 3970446
3971108 LYNMFPILGPFLKDNKSFLENVKEVNDFIKVTFTKYLQVLDK 3971233
3971234 NDQRSFIDAFLVKQQE
3971281
3971703 QNEKANKFFDDENLTEVVRNLFTAGMDTTATTLRWGLLLMMKYPEIQ 3971843
3971973 KKVQEEIDRVIGSNPPRTE
3972029
HRTKMPY
3972269
TDAVIHEIQRFANILPLNLPHETTMDVTIKGYFIPK 3972376
3972609 GTYIIPLLNSVLQDKTQWEKPCSFHPEHFLNSEGKFVKKDAFIPFSA 3972749
3973027
GRRICAGETLAKMELFLFFTSLLQRFTFQPPPGISSSDLDLSAPPRFVIAPVTHEVCAVSRS 3973212
>CYP2AC2
chicken
NW_060338.1|Gga3_WGA147_1, chr 3 BG710846.1 EST, XM_420053.1
3974997
MALVFILTFLFIMKIGGLWSNHWRKNFPPGPRALPIIGNLHLFDLKRPYRTYLQ 3975158
3976589
LSKEYGPVFSVQMGQRKIVVISGYETVKEALINQADAFAERPKIPIFEDLTRGN 3976750
3977081 GIVFAHGENWKVMRRFTLTTLRDFGMGKRAIEDRIVEEYGYLIDNVGSQE 3977230
3977626
GKPFDASKIINAAVANIIVSILLGKRFDYKDSRFIRLQHLTNESMRLAGKPLVT 3977787
3978987 MYNIFPYLGFLLRANKTLLKNRDEFHAYVKATFLENLKTLDKNDQRSFIDAFLVKQQE 3979160
3979765 EKSITNGYFHNGNLLSLVSNLFTAGVETISTTLNWSFLLMLKYPEIQSKVQ 3979917
3980773
EEIEQVIGSNPPRIEHRTQMPYTDAVIHEVQRFANILPLDLPHETAEDVTLKDYFIPK 3980946
3981123 GTYIIPLLTSVLRDKSQWEKPDMFYPEHFLDSKGKFVKKDAFMPFSA 3981263
3982308
GRRICAGETLAKMELFLFFTSLLQRFTFQPPPGVSSSDLDLSPAISFNVVPKPYKICAVARS 3982493
>CC322700
genomic clone TAM32-2H22. 38% to 2W1 CYP2 PSEUDOGENE?
237
DIVLSGTETTSTTLEWVGARLLQHPEAMNRVQEELDEGVRLDNCIELESQLSKL*CLEP 413
414
VLKETLWLAPPLPFQIPRGPDPTNTVGGYTIPK 512
>CC194181
Gallus gallus genomic clone CH261-182H7. BI390850
Length =
1047 48% to 2P4 41% to 2J2
MDFRFWPISQLGKLNVSMLLVVLV
MFLLIIDFVRKRRPRNFPPGPQLFPLVGTIVDLRQPLHLEMQKLTARYGNIFSVQFGGLT
FVVVSGYQMVREALVHQAEIFADRPHIPLKQEIFRGFG
>2R1
BM489821 FOUND BY Salar Khan Nawazi CB017803 BU107789 BU395606
HVYMRRQSQIHGQ
IFSLDLGGISAIVLNGYDAVKECLVHQSEIFADRPSLPLFKKLTNMGGLLNSKYGRGWT
EHRKLAVNTFRTFGYGQRSFEHKISEESVFF
LDAIDTYKGRPFDLKHLITNAVSNITNLI
IFGERFTYEDTEFQHMIEIFSENIELAASASVFLYNAFPWIGILPF
GKHQQLFKNAAEVY DFLHKLIER
VSENRKSQSPRHFIDAYLDEMDCNKNDPESTYSRENLIFSVGELIIAGTETTTNVLRWAV
LFMALYPNIQGHVQKEIDLVIGPNKMPALEEKCKMPYTEAVLHEVLRFCNIVPLGIFHAT
SKDTVVRGYSIPEGTTVITNLYSVHFDEKYWNNPEVSFPERF
LDSNGQFVKKDALXX
FSLGRRHCLG
EQLARMDWFXXXXXXXX
RFHLRF
>BG712952 BG710205 46% TO 2Y2 45% TO 2F1 44% TO 2C8 46% TO 2H1
found
by Wenhua Jiang
LIRELEKGGDAVQDPTELLSAAVGNVGLRLLCGRRFPYEDMGYRDALRRNAENLRIESSA
AGKLYNALPALLDLLPGPHQRFFRNSAIVRRFLDGISVGGSEKGGQTSRDFISAFRRKME
EEKDVPGSPFTAANLRVTTYDLFLAGTETTSMALRYGLMALLGNPHIMERLQEELDVVVGSDRLPSLRDRLALPYTDA
VIHEVQRHLDLIPLGFVRTVTRDTPFRGYVIPKGSTIYPVLSSALKDPHYFPDPERFDPQ
HFLDSEGKFRRCEAFIPFSAGRRMCIGEPLARTQLFIFTTALLQR
>CYP3A37
Gallus gallus (chicken) found by Kelly Earhart
MNFLPFFSIETWIILLIFVVLLIIYGTWPFGLFKKLGIPGPRPL
PFFGTCLEYRKGFLDFDTECFQKYGKIWGIYDGRQPAVVVMDPQIIKTVLVKECYSTF
TNRRRTDLAGVLRNAVSLAEDDQWKRLRTVLSPTFTSGKLKEMFPTMKYFGEMLVKNI
QKRVEKNSSVPVKDFFGSYSMDVVTSTSFGVNIDSMNNPKSPFVREMQKLTKFDFFDP
VFILSFVCPFLTPLMAKMNISFFPSDAVDFFMRSIDKIKKDRERETHTGRVDFLQMMI
ESQKSDSNGSSDAKHSYKALSDIEVLSQAFIFIFAGYEPTSNTLGYLAYQLALHPDVQ
QKVVNEIDTILPNKAPLTYEAIMQLEY
LDMAVNETLRLYPLGGRLERTCKRDVEINGV
TIPKGTIVIIPPYTLHRSPEYWPNPEEFRPERFSKENKDNIDPYTYLPFGAGPRNCIG
MRFALLTLKVAITAVLQHFTFQVCKETQIPLKLQSLGLTTPEKPIVLKLVPR TNTAKA
>60% to 3A4 61% to 3A37 new seq in CYP3A
found by Fei Cao, Lai Wei, Michael Mohler, Ioana Moisini, Wei Liu,
Yang Zong
BU250947 BU246013 CD735929 BU472711
MGLLPDLPPITWLLLAAFLGLLVLYGIWPYQTFKKLGIPGPRPLPF
LGTFLRYRQGLLNFDQMCFEKYGKIWGIYDGRQPVMAILDPVLIKTILVK
ECYSTFTNRRVFGLSGRLESALSMAMDDQWKRIRTVLSPTFTSGKLKEMFPIIESYGDKL
VKNIEKKVANEEFLDIKSIFGAYSMDVVASTSFSVDIDSMSKPSDPFVTNIRKFLKFSFLNPLLIFIVLFPF
MIPVLEKMNVTLLPTKVMDFFDAVFMKMKKEREEGYHVDRVDFLQLMIDSQSSQDSSKSAR
EKDSY
KSLSDEEILAQALIFVFAGYETTSSTLSYISYHLAIHPDVQKRLQDEIDANLPNKAAPTYNVVMQMEYLDMVVNESLRLHPPGGRIERICKKTVEFNGVTIPKDMVVMIPAYVLHRDPAYWPKPEEFRPERFSKENGENIDPYTFLPFGAGPRNCIGMRFALLIVKVAMVVLLQNFSFKPCKDTPIPLVLDTKGFMQPKKPIILKMVPR AHSDPEN*
>Gga.7197 59% to 4B1 and 57% to 4A11 52% to 4X1 50% to 4Z1
found by Ajit Narang, M. Nooh, Leslie Hunt, Stephanie Nance
MKATWFGVDVARVLHL
AAVFCLTCVLLKAIQLYHRRRELLRALSAFPGHPTHWLLGHVQEFLKEEDVLEKAEAWAL
KYQHAHPIWFGGFSAVLVINDPEYAKALFARGDPKDNLSYKHLIPWIGNGLLILHGPKWH
QHRKLLTPGFHYDVLKPYVALMAESTNVMLDKWEKLITN
GKSVELFEHVSLMTLDSIMKCAFSYHSNCQTDRQNTYIQAVYDLCRMVHERLRIFPYHND
FIYWLSPHGYQFRKVCQLAHDHTDKVIQERKESLKDEREFEKIKKKRHLDFLDILLCA
KDETGAGLSDEDLRA
EVDTFMFEGHDTTASGLSWVLYCLASHPEHQARCREEIKDILGSRDTIQWEDLGKMTYST
MCIKESLRLYPPVPGVSRQLSKPITFHDGRTLPEGTITAISIYLIHRNPLVWKDPL
VFDPLRFSPENVSGRHSHAFLPFAAGMRNCIGQ
QFAMIEMKVALALILLRFELSPDLTNPPHKIPRLILRSKNGIHLYLKKIH*
>related to 4B1/4A11 seqs 56% to 4A11 56% to 4B1 49% to 4X1 49%
to 4Z1
found by G. Van Alstine
MVSLLDNIARPS
AVILQLSVVLGVIFVLLKVVRFYQGRKKILKALEAFPGPPAHWLYGHNHLITGDKVLNL
LVSLGEEYPYAFPRWFGPVLPSLIVHHPEYAKTILGRGDPKPPVPYQFLVPWIGKGLLVL
SGTKWFQHRKLLTPAFHYDVLKSYVSLMSDSVKVMLDKWEKKKSVELFEDVSLMALDSIMKCAFSYNANCQ
TQSNSDTYIKAVFDLGYLINKRIQNFSYQDAF
YDLTHSSREFQDACRRAHAHTDKVIQERKILLSNDKELDKIRKKRHLDFLDILLCTKDEN
GVGLSDEDLRAEVDTFMFEGHDTTASGISWLLYCMALHPKHQALCREEIQG
IMGNRDTIEWEDLGKMTYST
MCIKESLRLFPPVPAVSRRLSKPVTFSDGRSLPEGSQVSLNIFGIHRNRDVWEDPEVFDP
LRFSPENSAHRHSHAFLPFSAGSRNCIGQQFAMNEMKVALALTLLRFELFPNASKPPMLT
QQLILKSRSGIHLHLKKIC*
>New CYP4F family member 63% to 4F22 CD735260 BU124422 CD731342 CD737432found by Jie Shen, Lei Yang
MVLSWLLVALLVALLVAWLRDAVVTVTRFRATCQQLRHFPLPPWRNWLLGHTGMARNTEEGLQDVDKVVAQYRHGCLWWLSPWLPILRLFHPDTLRPVLMASAFTAPKDKLFYGFLKPWLGDGLLLSRGDKWARHRRLLTPAFHFDILKSYVSIFNSSTHIMHTKWRAAAKAVGGPVGRNMMEDLSLLTLDTLQKCIFSHDSHCQEQRSEYIEAILELSTLVVRRQQRLLHHTSWLYRLSADGRRFARACATVHSFTANVVQRRRQELNHLGHQAWLKGRQGRSTDFIDLLLLTKDEDGNTLSDEDISAEADTFMFEGHDTTASGLAWLLYNLAHHPHYQEQCRQEVRELLKGRNVEEIEWEDLSLLPFTTMCIKESLRLHPPVTAVSRRCTEDIAMRDGRVIPKEVICLMSIYGTHHNPDIWPEPQVYDPLRFSPENSQGRSPLAFIPFSAGPRNCIGQSFAMAEMKVVAALTLARFAV
RPDPARPVRRKSELILRAEDGLWLQLEPLSAMP*
>CYP4V BU122915 BU456889 BU382948 BG710225 BU250926 58% TO 4V5
found by Y. Zhuang
MAMEITLGSMEGTQLLPW
VAGAITLLLTVVTVHFLPSLLNYWWWWWVMKPIPGIRPCYPFVGNALLLERNGEGFFKQL
QQYADEFRKMPMFKLWLGPLPVTVLFHPDSVEVILSSSKHIKKSFLYTFLHPWLGTGLLT
STGDKWRSRRKMITPTFHFAILNDFLEVMTEQGGVRSEKLEKHVDKEPFNIFTDITLCAL