This is a file in progress.  Last modified Nov. 1, 2000 D. Nelson
This file contains 33 different mitochondrial carrier sequences from the 
Candida albicans genome project on 39 contigs.

"Sequence data for Candida albicans was obtained from the
Stanford DNA Sequencing and Technology Center website at
http://www-sequence.stanford.edu/group/candida.
Sequencing of Candida albicans was accomplished with the
support of the NIDR and the Burroughs Wellcome Fund."

Searches were done at
http://sequence-www.stanford.edu/group/candida/search.html

All S. cerevisiae carriers have an ortholog or homolog in C. albicans
Two are fairly weak (YFR045w, 32% and YDR470c 32%), but they are probably real.
There are two sequences in C. albicans with no ortholog in S. cerevisiae.
The sequence Contig6-2519 gene 3 comp(185104-186195) is only 26% identical to YPR128c the best match in S. cerevisiae, but it matches at 40% identity to L27998 Candida boidinii a peroxisomal membrane protein (PMP47B).  It does not seem to have a yeast ortholog.
Sequence Contig6-2226 is 33% identical to ORT1, but another sequence 
Contig6-2519 gene 2 is 47% identical to ORT1, so this is also an orphan carrier 
with no good match in Bakers yeast.  With these two exceptions, 
there is a 1:1 correspondence between S. cerevisiae and Candida carrier sequence groups, though 
there are not always the same number of sequences in a functional group.  For example 
the ADP/ATP carrier group has only one member in Candida but it has three sequences 
in S. cerevisiae.  This may reflect a lower redundancy of genes in Candida.  Only two 
functional groups have more than one member.  There are two phosphate carriers and 
three sequences in the YMC1, YMC2 group.  

Sorted by contig number
 Contig6-1664 size=4392 = Contig6-2272 82% to YHM1 over 298 aa
 Contig6-1765 size=4965 = Contig6-2519 gene 1 69% to citrate carrier over 292 aa
 Contig6-1829 size=7298  45% to YDL119c over 315 aa = Contig6-1946
 Contig6-1946 size=10501 45% to YDL119c over 315 aa = Contig6-1829
 Contig6-2021 size=7972  68% to SFC1 over 305 aa
 Contig6-2027 size=9360  61% to ODC1 over 293 aa
 Contig6-2047 size=10680 41% to YMC1 over 296 aa = Contig6-2065
 Contig6-2065 size=13636 41% to YMC1 over 296 aa = Contig6-2047
 Contig6-2076 size=12052 = contig6-2403 gene 2 54% to YIL006w over 297 aa 
 Contig6-2081 size=11151 39% to YPR128c over 296 aa
 Contig6-2093 size=12723 = Contig6-2390 32% to YDR470c over 350 aa
 Contig6-2125 size=13950 53% to YPR011c over 315 aa
 Contig6-2135 size=11099 56% to YMR166c over 349 aa
 Contig6-2154 size=13570 76% to YHM2 over 290 aa
 Contig6-2169 size=17423 63% to YPR021c over 298 aa
 Contig6-2197 size=17055 76% to MIR1 over 307 aa phosphate carrier
 Contig6-2226 size=18678 33% to ORT1 over 278 aa there is a better match to ORT1
 Contig6-2238 size=17099 32% to YFR045w over 306 amino acids
 Contig6-2272 size=18798 = Contig6-1664 82% to YHM1 over 298 aa
 Contig6-2291 size=18012 54% to YGR257c over 261 aa
 Contig6-2313 size=19557 55% to CRC1 over 272 aa
 Contig6-2321 size=24606 62% to RIM2 over 330 aa
 Contig6-2363 size=26098 56% to YHR002w over 333 aa
 Contig6-2365 size=31665 54% to DIC1 over 302 aa
 Contig6-2390 size=28916 = contig6-2093 32% to YDR470c over 350 aa
 Contig6-2403 gene 1 5376-6410 65% to YER053c over 296 aa phosphate carrier
 Contig6-2403 gene 2 = Contig6-2076 54% to YIL006w over 297 aa
 Contig6-2403 gene 3 23060-24878 60% to YNL083w over 258 aa 
 Contig6-2434 37% to YGR096w over 304 aa
 Contig6-2443 size=36531 53% to MRS3 over 300 aa
 Contig6-2488 size=69390 58% to YMC1 over 297 aa
 Contig6-2498 size=78020 35% to FLX1 over 300 aa
 Contig6-2503 size=111972 38% to contig6-2488 over 295 aa, 35% YMC1 over 299 aa
 Contig6-2508 ADP/ATP carrier 84% over 300 aa
 Contig6-2512 size=133421 63% to PET8 over 273 aa
 Contig6-2514 size=126094 55% to OAC1 over 333 aa
 Contig6-2519 size=281734 gene 1 278864-279745 = Contig6-1765 69% to citrate carrier
 Contig6-2519 size=281734 gene 2  175434-176387 47% to ORT1 over 253 aa
 Contig6-2519 size=281734 gene 3 comp(185104-186195) 26% to YPR128c over 348 aa

Sequences sorted by identity with S. cerevisiae carriers

Contig6-2508             84% over 300 aa ADP/ATP carrier
Contig6-1664 size=4392   82% to YHM1 over 298 aa = Contig6-2272
Contig6-2272 size=18798  82% to YHM1 over 298 aa = Contig6-1664
Contig6-2154 size=13570  76% to YHM2 over 290 aa
Contig6-2197 size=17055  76% to  MIR1 over 307 aa phosphate carrier
Contig6-1765 size=4965   69% to citrate carrier over 292 aa = Contig6-2519 gene 1
Contig6-2519 size=281734 69% to citrate carrier   gene 1 278864-279745 = Contig6-1765 
Contig6-2021 size=7972   68% to SFC1 over 305 aa
Contig6-2403 gene 1 5376-6410 65% to  YER053c over 296 aa phosphate carrier
Contig6-2169 size=17423  63% to YPR021c over 298 aa
Contig6-2512 size=133421 63% to PET8 over 273 aa
Contig6-2321 size=24606  62% to RIM2 over 330 aa
Contig6-2027 size=9360   61% to ODC1 over 293 aa
Contig6-2403                  60% to  YNL083w over 258 aa gene 3 23060-24878
Contig6-2488 size=69390  58% to  YMC1 over 297 aa
Contig6-2135 size=11099  56% to YMR166c over 349 aa
Contig6-2363 size=26098  56% to YHR002w over 333 aa
Contig6-2313 size=19557  55% to CRC1 over 272 aa
Contig6-2514 size=126094 55% to OAC1 over 333 aa
Contig6-2076 size=12052  54% to  YIL006w over 297 aa = contig6-2403 gene 2
Contig6-2291 size=18012  54% to  YGR257c over 261 aa
Contig6-2365 size=31665  54% to DIC1 over 302 aa
Contig6-2403 gene 2           54% to  YIL006w over 297 aa  = Contig6-2076
Contig6-2125 size=13950  53% to YPR011c over 315 aa
Contig6-2443 size=36531  53% to MRS3 over 300 aa
Contig6-2519 size=281734 47% to  ORT1 over 253 aa gene 2  175434-176387
Contig6-1829 size=7298   45% to YDL119c over 315 aa = Contig6-1946
Contig6-1946 size=10501  45% to YDL119c over 315 aa = Contig6-1829
Contig6-2047 size=10680  41% to YMC1 over 296 aa = Contig6-2065
Contig6-2065 size=13636  41% to YMC1 over 296 aa = Contig6-2047
Contig6-2081 size=11151  39% to YPR128c over 296 aa
Contig6-2503 size=111972 38% to contig6-2488 over 295 aa, 35% YMC1 over 299 aa
Contig6-2434             37% to  YGR096w over 304 aa
Contig6-2498 size=78020  35% to FLX1 over 300 aa
Contig6-2226 size=18678  33% to ORT1 over 278 aa there is a better match to ORT1
Contig6-2390 size=28916  32% to YDR470c over 350 aa = contig6-2093
Contig6-2093 size=12723  32% to YDR470c over 350 aa = Contig6-2390
Contig6-2238 size=17099  32% to YFR045w over 306 amino acids
Contig6-2519 size=281734 26%  to YPR128c over 348 aa gene 3 comp(185104-186195)



>Contig6-2508 comp(1709-2614) ADP/ATP carrier 84% over 300 aa 
MVDSNFFVDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKQGRLEKRYTGIVDCFKRTAADEGVVSFWRGNTANVIRY
FPTQALNFAFKDKFKAMFGFKKDENYWKWFAGNLASGGLAGATSLAFVYSLDYARTRLANDAKSSKGDGKREFNGLVDVY
KKTLASDGIAGLYRGFGPSVIGIVVYRGLYFGLYDSLKPVVLVGPLEGSFLASFLLGWAVTTGASTASYPLDTVRRRMMM
TSGQAVKYDGALDCFRKVVAAEGVGSLFKGCGANILRGVAGAGVISLYDQLQVILFGKKFK*

>Contig6-2125 size=13950 comp(6774-7715) 53% to YPR011c over 315 aa
MEEYKLQPMAKESNHLLSDIKNFIKIDSNASFIAGGIAGAVSRTVVSPFERAKILLQLQGPGSQQAYQGMFPTILKMYRE
EGWKGLFRGNLLNCIRIFPYSAVQFATFEKCKDIMLHYNPRDTQQLNGYERLIAGSVGGIVSVAVTYPLDLVRARITVQT
ASLSKLNKGKMVRAPKVMETLKDVYKNEGGILGLYRGIIPTTLGVAPYVAINFALYEKLREMMDSSPRDFSNPVWKLSAG
AVSSFIGGVLIYPLDLLRKRYQVASMAGGELGFQYRSVAHALHSIFTTEGFFGAYKGLTANLYKIVPSMAVSWLCYDTLK
DWINRW*

>Contig6-2169 size=17423 4586-6781 63% to YPR021c over 298 aa
MSSLSSELKAKEIFNQFATEGANEEKIITLPDFINVLSPFTTDIPKQAFSLLYLIADAEKKGFVTEDNWLKFVNTLTSPD
GEYKLLYQFLSGQQNTNSKITYSQCIDILNKINSSIDPSYQQKLIKLNWIYFPRFFEPNGSIEFNDFVTLISYLPVTKLI
GNFEITASKSKTVNGEELVRLLSTNLNHKLSNKLKINLHNVTDFFGKQQDYTLSNLLFIYDALSKVDLINEVIVNTPPTT
KDKDDILINKTDLYNHLNDPLLKSANFKPVSRLELDLLFYLINKKTDEDIPRRELVSFLNPNFNNNLNTLAPIFEHSQSK
HSTIDGGDNFSLWPLYDSLYSFFLGSIAGCIGATAVYPIDLVKTRMQAQKHNALYDNSLDCFKKILRNEGFKGLYSGLGA
QLVGVAPEKAIKLTVNDLVRGIGSNEDGSITMKWEILAGLTAGGCQVIFTNPLEIVKIRLQMQGNTKNLSKPGEIPHKHL
NASQIIRQLGLRGLYKGASACLLRDVPFSAIYFPTYANLKKHMFGFDPNDKTKHQKLSTWQLLVAGALAGAPAAFFTTPA
DVIKTRLQVAGKKNEAKYKGILDCGASILKQEGLSAFFKGSLARVFRSSPQFGFTLASYELLQNLFPLHPPLTRESSFKG
ISGYPGVYNLTNDQVYNSQEKNERLILMNKSELSPSPSSSSSSLDTVNDTLVKLPAEYIYKSQDAVKLLLDIDYKFGNFN
YDSYVNYIKKK*

>Contig6-2514 size=126094  32136-34188 55% to OAC1 over 333 aa
MSQTERKLIINTAGGAAANMKQKEIPSTKNDAQKVSTLGGFLAGGVAACMAVTFTNPIELIKTRMQLQGELVKKSKDAVV
LYKNPLQAFAVIYRNEGIRGLQQGLACGYYYQLALNGCRIGFYEPSRFYLSKAFAPSHIMPDGQVKQSLSINVLAGFVSG
ASGAVLASPMFLIKTRMQSFSASNTGGAAVGQQTFYKNTWDGFSQIYHSEGIKGLYRGVDAAILRTGAGSAAQLPTYYLT
KSFLLKHGLAKENSFSLNFISSIMAGLGVAIVMNPWDVVLTRMYNQKGNLYSGPIDCFKKTIAAEGAMALYKGFWAQLFR
IGPHTILTLLFMEQCMKGMVLIEKKLRSFN*

>Contig6-2434 size=29042 comp(12877-13782) 37% to YGR096w over 304 aa
MSTKREDHLRKGADVTPTEALVAGSIAGAISRAFTAPLDTIKIRLQLQPKGFKHRKSVVTIVKNLLENEGIIALWKGNVPAEILYILYGGVQFGSY
SIISKLVSKLENNYRINLSSANHSLIVGIGSGIVSTLVTYPFDLLRTRLIANKNRGLLSMTGTIKDIIKLEGIRGIYAGIRPAMLSVSSTTGLMFW
SYELARELSNNYQRVPFIEAICGFIAGATSKGITFPLDTLRKRCQMCSVVHGRPYTALHIFVTILKNEGVFGLYKGFGISVLKTAPTSAISLFMYE
YSLSFIRKIRVIE*

>Contig6-2076 size=12052 comp(6400-7500) 54% to YIL006w over 297 aa = contig6-2403 gene 2
MSNDPTPILDNAKDSSQVPDFSDIVQGEDLEFRQSKAPTFPVVHKIEKLGEIPPPTILSRLSNNQLITIAGAASGFLAGIVVCPLDVVKTRLQAQG
TVGENLKYNGFLGTFKTILREEGIRGLYRGLVPTMIGYLPTWTIYFTVYEQAKRFYPSFLHQYNIENPSIIHFCSALTAGMTSSIAVNPIWVVKTR
LMVQTGKEGQQVYYRGTFDAFKKMYQHEGLKVFYSGLIPSLFGLLHVGIHFPVYEKLKSLLHCNLMSNDSGSNGVLWRLIAASSFSKMVASTVTYP
HEILRTRMQLRRDKGKSKSLVKTVSSIFQKDGLRGFYSGYFTNLARTLPASAVTLVSFEYFKTYLLEINGRLKSKFTH*

>Contig6-2403 3 genes  gene 2 runs off end of contig comp(<1-939) missing C-term = contig6-2076
MSNDPTPILDNAKDSSQVPDFSDIVQGEDLEFRQSKAPTFPVVHKIEKLGEIPPPTILSRLSNNQLITIAGAASGFLAGIVVCPLDVVKTRLQAQG
TVGENLKYNGFLGTFKTILREEGIRGLYRGLVPTMIGYLPTWTIYFTVYEQAKRFYPSFLHQYNIENPSIIHFCSALTAGMTSSIAVNPIWVVKTR
LMVQTGKEGQQVYYRGTFDAFKKMYQHEGLKVFYSGLIPSLFGLLHVGIHFPVYEKLKSLLHCNLLSNDSGSNGVLWRLIAASSFSKMVASTVTYP
HEILRTRMQLRRDKGKSKSLVKTVL

>Contig6-1765 size=4965 1070-1933 69% to citrate carrier over 292 aa missing N-term 
same gene as Contig6-2519 size=281734 gene 1 (97% identical)
VDPLKSFIAGGTAGAVEGIITYPFEFAKTRLQLISKSSTASRNPLVLIYNVAKTQGVSSLYVGCPAFVVGNTLKASVRFLGFDSIKNLLSDKNGKL
SGPRGVIAGLGAGLLESVVAVTPFEAIKTALIDDKQSIKPKYQNGVISGSFKLVRDMGFKGIYAGVVPVSLRQAANQAVRLGSYNAMKTMIQQASG
QKPNEPLSGTTTFAVGALAGIITVYTTMPIDTVKTRMQALGADKLYSSTLNCFVKIFKDEGLLTFWKGATPRLGRLVLSGGIVFLCYEKIMILLN*

>Contig6-2519 size=281734 gene 1 278864-279745 missing N-terminal 69% to citrate carrier over 
292 aa same gene as Contig6-1765
VDPLKSFIAGGTAGAVEGIITYPFEFAKTRLQLISKSSTASRNPLVLIYNVAKTQGVSSLYVGCPAFVVGNTLKASVRFLGFDLIKNLLL
DKNGKLSGPRGVIAGLGAGLLESVVAVTPFEAIKTALIDDKQLIKPKYQNGVISGSFKLVRDMGFKGIYAGVVPVSLRQAANQAVRLGSYNAMKTM
IQQASGQKPNEPLSGTTTFAVGALAGIITVYTTMPIDTVKTRMQALGADKLYSSTLNCFVKIFKDEGLLTFWKGATPRLGRLVLSGGIVFLCYEKS
MIVLN*

>Contig6-2519 size=281734 gene 2  175434-176387 47% to ORT1 over 253 aa
MDQEITSPNTSHHETLHPLKEITFGAISGMVGKVVEFPLDTIKVRLQSAGSSGGITTLQMIKTTYHNEGIFNGFYKGLKAPMIGACLENAILFSSY
NFGSTVITNYLNKNNDKNQYTTETLPFLGKILAGGFAGFMASFVLTPVELVKCQLQVSNLSLDKSHHTYGTIIKSTIRDRGTIGLWKGLNSTIVRE
VIGTAIWFGTYEYVNDYYKKVKEPCVSNKDVQLLIAGAMAGVTFNFSMFPVDTIKSNIQTHDLFNNNRNSNSVGKHMGFWQTTRSIIAKPGGILNL
YNGLGITMVRCIPANALIFYTYELLKQNF*

>Contig6-2519 size=281734 gene 3 minus strand comp(185104-186195) 26% to YPR128c over 348 aa
no ortholog in S. cerevisiae, 40% to L27998 Candida boidinii peroxisomal protein (PMP47B)
MSNQELAHAVLGAVGGALALGITYPLITLSTIAQTAAKKKEAEEASTTEDGKKPQPTVSLTTLEKIAHVIQNNAAYIAAKEILKEKGPLGLYSGLE
SALYGITLTNFIYYYFYELTSNVFLRANGKKRNGLSTIQSIITGAIAGAFTCVGSNPFWVANTRMMTEKKKEKTATAGDAADAKEENDNSSNSTFK
ALVNIVEQDGVGALFAGVLPALVLVINPIIQYTIFEQIKNIIIAKDGPKAFTAVKAFFIGAFGKLIATSLTYPYITLKSRMHIKRKKLNIDNQQQD
EEKQLSMIQEIRKIVKEEGLEGLYAGLAVKLTQSIATAAFLFYFKEELFSGSVKLIEILRVFSFKKSLKSPVVQV*

>Contig6-2291 size=18012 9850-10899 54% to YGR257c over 261 aa
MAEENISFSQRMISACSGSLVTSLVVTPFDVIRIRIQQQSILPQEQPCCQLHFPEHNFPKQKVPVEMAPELFWIHDKYCQSAESCTRIYSTFQGFS
TVAKHEGVGTLWRGLSLTLLMAVPSNIIYFTGYEYIRDHSPISNHRLNPLFCGSWERTLLATFVAPAELIKTRLQSIPTDLKSASHILSNLLRDLS
AAVKKDGVRTMFKGLGITLWRDVPFSGIYWSSYEYFKAFFARTLKTDFNNPTRGGIDDWKVFATSFLSGSISGTIAAFFTNPFDVGKTRIQITMQE
NEKISHPNMFKYLYKIYKNEGMGALYAGFGPRVMKIAPACAIMISSYEVGKKFFKNGNNSN*

>Contig6-2403 3 genes  gene 1 phosphate carrier 5376-6410 65% to YER053c over 296 aa 
MAGNSLADSLTQPLNDQLKKATDKLTGGGSGGASSSSGGSKIKLFTPEYYAACTVGGIIACGPTHSAVTPLDLVKCRRQVNASIYKSNIQGWKTIL
KTQGDSIFTGIGATFIGYSFQGAGKYGFYEVFKKKYSDLVGPKVAQNYQTGIFLAASASAEFLADIALCPWETIKVKTQTTIPPYANSVFDGWKKI
VATEGFGGLYKGLVPLWCRQIPYTMVKFASFENIVAGIYSYLGKPKSDYTNLQQTGVSFLGGYIAGIFCAIVSHPADVMVSKINNEKLPNESIGQA
ISKIYSKIGFAGLWNGLPVRIVMIGTLTGFQWLIYDSFKVYIGLPTTGGH*

>Contig6-2403 3 genes  gene 3 23060-24878 60% to YNL083w over 258 aa
MASETLSTTDINDNSANNDVEQDITSTTTTTTNNNSVNIPAKPNDYEALFKKLDIEKTGEITFLDFKRALKKFNHPINESPELLLKVFNSFDSNHD
KKIDFKDFKEYLKTTDDQILKGFNQLDQDNDGRLNKSDFIRYLKESLHVKPSVANIDLLFKQLDSNEDGYINYDEFREFLLLVPRLQGSRIKTAFT
FLFEEYDINSDGDVTLINQFLDGFKFFLAGGLAGVVSRTCTAPFDRIKVFLIARTDLSSTILHSKQEIARQIALGAETHVIEALRKKLAHAEMEQA
AELLAEEAKTTKSAAAARTAASGVTTASAQNAKTIRSPIVQAVRTLWRQGGIKAFYVGNGLNVMKVFPESAMKFGSFEAAKRFFARIEGVNDTTKI
SKISTYLAGGFGGVVAQLTVYPIDTLKFRLQCSNLDHPLNAILTAKEMLKDGGVKIFYRGIGVGLAGMFPYAALDLGTFSTIKKLLVKKYGNKDDQ
LLPTYLTLSLGAFSGSFAATIVYPVNLLRTRLQSQGTYAHPFRYEGFYDVFSKTVAREGYSGLWKGLVPNLAKVAPAVSISYFVYESLIRRF*

>Contig6-2197 size=17055 11615-12538 76% to MIR1 over 307 aa phosphate carrier
MSTPSEYKLPEYTVKDYASFALAGAIGCGATHGAMTPIDVVKTRIQLEPTVYNKGMLGSFKQVIKSEGAGALLTGLGPTILGYSLQGAFKFGGYEL
FKKTFIEYLGYDTAKQYKDSIYIGSSALAEFFADIALCPLEATRIRLVSQPTFANGLIGGFSRILKEEGVGSFYNGFTPILFKQIPYNIAKFLVFE
RANEAIYNAIPTPKVDLSTAAHTAVNLGAGIIAGCAAAIVSQPADTLLSKVNKTKKAPGQSTVGLLIQLAKQLGVSGSFAGLPTRLVMVGTLTSLQ
FTIYGSLKKALNCPPAVAL*

>Contig6-2488 size=69390 comp(49969-50868) 58% to YMC1 over 297 aa
MTIELEEPPLTQDNKQVAKDLFAGTMGGIAQVLVGQPFDTVKVRLQSAPEGTYNGSLDVIKKLLATEGPRGFYKGTLTPLVGVGACVSVQFSVNEY
MKRYYDKRLNGQPMSIIDYFVCGGVAGFANGFLASPIEHIRIRLQTQTGNSKNFNGPLDCAKKIYQTDGIKGIYKGLVPTLIRESVGLGIYFATYE
ALIARELKTHPKLTRNDISAWKLCTFGGLSGYTLWIGIYPIDVIKSKLQTDSIKDPKYRSSLAVIKDVFRTQGIRGFYKGFLPTILRAAPANGATF
AVFEVTIRLLG*

>Contig6-2503 size=111972 Comp(16084-17247) N-term extension seq. may continue 
upstream 38% to contig6-2488 over 295 aa, 35% to YMC1 over 299 aa
LFNIFRILLVPNLSPVQVHNFLRTGADLKKNKEKRKRKQKISNNLNYNQNLNRLSIKTVESLFRFSNLLAFCLVILINMS
IVVQDKEDQILTQLEHPQPDTKSPPKYIAYLAGVCSGINKNLVGHPFDTWKSRLQTAPKGRFKGPIDCAWQTLKYEGPFG
FYKGFFTPPLVGWVFMDSIMLGSLHTYRELVKDYIYPQEKKLPLVGHMIAGLGSGLTVSFVAAPIEQCKARLQVQYDKKS
RTYSGPIDVAKKVYQAAGIRGIYSGLISTMIFRTNFIFWWGSYEIFTQYFEKNTKMSTPSINFWAGGLSATVFWIFAYPA
DVVKQNIMTDSPIQSEKKFPRWIDAVKYIYKEKGWRGFTKGFGPAILRSFPANAAALLAFEWVMRLLK*

>Contig6-2313 size=19557 yor100c 5901-6734 55% to CRC1 over 272 aa 
carnitine acylcarnitine carrier
MDDVDSALADNVKSFAAGGFGGICAVLTGHPFDLVKVRLQTGLYNSSVQCVKQTIAKDGLTGLYRGVLPPLLGVTPMFAV
SFWGYDVGKRLVSTYTGKSIDQFEIKEISTAGFISAIPTTLVAAPFERVKVMMQIQEGNKSKSMAGVVAEMYKTGGLRSI
FKGSVATLARDGPGSALYFATYEYLKKELSSPGEDLSLFAIMTAGGFAGVSMWLGVFPIDTIKSTQQSSNVPISILQTTK
NIYAKGGIKAFFPGVGPALARSFPANAATFLGVELARKALDLII*

>Contig6-2027 size=9360 6001-6861 61% to ODC1 over 293 aa
MSEPKPLPFIYQFVSGAIAGVSEILVMYPLDVVKTRQQLATTNDYNGTINCLKKIVREEGFSRLYKGISAPILMEAPKRA
TKFAANDEWGKFYRNYFGVTKMNQSLAILTGATAGATESFVVVPFELIKIRLQDKTTKFNGMGEVVKDIVQKNGVLGLYK
GLESTLWRHIWWNAGYFGCIHQVRSLMPKPKDSTQKTLIDLTCGTVGGTFGTILNTPFDVVKSRIQAGSTQYRWTYPSIL
KVAREEGFSALYKGFIPKVLRLGPGGGILLVVFTACMDFFRQYHEK*

>Contig6-2047 size=10680 1765-2673 same gene as contig6-2065 
41% to YMC1 over 296 aa
MSNAETVLDTEITKSVDNSLTRKLKDIAAGFVGGATQVLIGQPADLVKIRLQTTSATSSFQVIKNVIKNEGILAFYKGTL
PPLFGVGVCVSLQFYGFHETKRQILQYTGQPSLNLWPQTYIAGAMAGVVNTPVTAPVEQLRILSQSSGKPVSLRETVSKI
YREQGIVNGIYRGFGITLIREIQAYGVWFLTYETLIQKIIDLQHYKSRDQISTPELLASGAIAGNALWLLSYPLDVIKSN
VQSDGFGKDSKFGGSSLKALRYIYSHHGLTGFWKGIVPCLLRAVPCSAGTFASVELALRLMG*

>Contig6-2065 size=13636 10963-11871 same gene as contig6-2047
MSNAETVLDTEITKSVDNSLTRKLKDIAAGFVGGATQVLIGQPADLVKIRLQTTSATSSFQVIKNVIKNEGILAFYKGTL
PPLFGVGVCVSLQFYGFHETKRQILQYTGQPSLNLWPQTYIAGAMAGVVNTPVTAPVEQLRILSQSSGKPVSLRETVSKI
YREQGIVNGIYRGFGITLIREIQAYGVWFLTYETLIQKIIDLQHYKSRDQISTPELLASGAIAGNALWLLSYPLDVIKSN
VQSDGFGKDSKFGGSSLKALRYIYSHHGLTGFWRGIVPCLLRAVPCSAGTFASVELALRLMG*

>Contig6-2365 size=31665 27239-28180 missing N-terminal 54% to DIC1 over 302 aa
IISFFFFLLTLLKSRFWYGGAASMAACLVTHPLDLAKVRLQTATKPGQSLLSMIYQIITKEGFFKIYSGLTASLLRQATY
STTRFGIYEFLKEQYMESIATTGGTEQKKPSTAVLLPMSMIAGALGGLVGNPSDVVNIRMQNDSTLPINQRRNYRNAFDG
IYKICQQEGINSLFRGLTPNLIRGVLMTASQVVTYDIAKSILVDHIHMDPSKKSTHFSASLIAGLVATTVCSPADVVKTR
IMNSKGSTGGGSGGDGVNGNAILILKNAVKHEGIGFMFRGWLPSFIRLGPHTIVTFLVLEQLRKFKLGMSRSD*

>Contig6-2021 size=7972 SFC1 like 4352-5263 68% to SFC1 over 305 aa
MSSTQKQKKGAVDFVAGGVAGLFEALCCHPLDTIKVRMQLYKKSGQKPPGFIKTGVNIVQKEGFLSLYKGLGAVVIGIVP
KMAIRFSSYEFYRSFFLDENGKISTGKTFLAGVGAGITESVMVVNPMEVVKIRLQAQHHSMKDPLDIPKYRNAPHAAYLI
VKEEGFSTLYRGVSLTCARQATNQGANFATYSTIKAYLQKQQNTELLPAWQTSIVGLISGAVGPLTNAPLDTIKTRLQKS
KFTNKENGLVRIVKIGKQLVKEEGINALYKGITPRIMRVAPGQAVVFTVYEAVKHYLTNEPTA*

>Contig6-2135 size=11099 Comp(2483-3583) 56% to YMR166c over 349 aa
MSQVFTSSTIPLTFESREHKEHHSIRNKPPLSPPESTDNETLQQPIWQCMLAGGFGGVVGDSAMHSLDTVKTRQQGFPYK
VKYKHMIPAYSTILKEEGFFRGLYGGYTPAALGSFPSTAAFFGTYEYSKRVMINQWHVNETLAYFIAGILGDLASSIFYV
PSEVLKTRLQLQGKYNNPYTKECGYNYRGLGNAIVTIAKTEGPKTFVFGYKETLFRDLPFSALQFSFYETFRQWAIYSNN
GSDDLSISMELLTGAAAGGLAGTLTTPLDVIKTRIQTATNTSELSSSISTKQTITNPIIRLLNRNATLKALVSIYKHEGI
LGAFSGVGPRFIWTGIQSSIMLLLYQVALKQLDVLSDDKDRDKLES* 

>Contig6-2512 size=133421 61448-62266 63% to PET8 over 273 aa
MSESTFFTSLISGACAGIATDIVFFPIDTIKTRLQAKGGFFTNGGYHGIYRGLGSCVVASAPLASLFFITYDSLKRDLPP
AVSSLGVRHMIAASMGEIAACIVRVPAEVIKQRTQASHMGNQTSWSNLLHILRNSNNEGVLKGLYRGWNSTIMREIPFTM
IQFPLYEYLKVQWQQNLNSFIPQGFKGAACGMIAGGVAAALTTPLDVIKTRIMLHKDRISIVSLVKNLIREEGPAALFNG
IVPRTCWISCGGAIFLGCYELVHTELTKRSRL*

>Contig6-1664 size=4392 623-1537 = contig6-2272 82% to YHM1 over 298 aa
MSPAAQSSSDKKQSGIARVLGSATAGIAEIGVFHPVDTISKRLMSNHTKVTSLHELNKVIFRDQASQALGKRLFSLFPGL
GYAACYKILQRVYKYGGQPFANEFLTKNFKDTYDSAFGPKTGKALMSATAGSLIGIGEVVLLPLDVLKIKRQTNPESFRG
RGFLKIIQDEGLGLYRGWGWTMARNAPGSFALFGGNSFAKEYIFGLKDYSQATWSQNFITSIFGASASLIVSAPLDVIKT
RIQNRNFENPESGFTILKNMFKNEGITAFFKGLTPKLLTTGPKLVFSFALAQSLIPAFDKLLSK*

>Contig6-2272 size=18798 YHM1 Comp(11264-12177) = contig6-1664
MSPAAQSSSDKKQSGIARVLGSATAGIAEIGVFHPVDTISKRLMSNHTKVTSLHELNKVIFRDQASQALGKRLFSLFPGL
GYAACYKILQRVYKYGGQPFANEFLTKNFKDTYDAAFGPKTGKALMSATAGSLIGIGEVVLLPLDVLKIKRQTNPESFRG
RGFLKIIQDEGLGLYRGWGWTMARNAPGSFALFGGNSFAKEYIFGLKDYSQATWSQNFITSIFGASASLIVSAPLDVIKT
RIQNRNFENPESG (frame shift here)
FTILKNMFKNEGITAFFKGLTPKLLTTGPKLVFSFALAQSLIPAFDKLLSK*

>Contig6-2154 size=13570 Comp(3769-4674) 76% to YHM2 over 290 aa 
MSKQIEKKPISFANIALGAGLNLAEVTTLGQPLEVIKTTMAANRSLTMPQAAKFVWSRGGILGFYQGLIPWAWIEASTKG
AVLLFVSAEAEYQFKKLGMNNFVSGMGGGITGGLAQAYLTMGFCTCMKTVEITRSKQANTPGVPQQTSFQVFKEIYRKEG
IRGINKGVNAVAIRQMTNWGSRFGFSRLAEESIRSLTGKSESQKLLAWEKIASSVIGGGLSAWNQPIEVIRVEMQSKTND
PNRPKNLSVAGAFKYIYQQNGIKGLYRGVTPRIGLGVWQTVFMVAFGDIFKRMLNTDGTGH*

>Contig6-2443 size=36531 Comp(18470-19427) 53% to MRS3 over 300 aa
MEHQLQFLPKDSVEIDYEALPDDASLAAHLTAGALAGIMEHTVMFPIDSIKTRMQMNLSNSEISRGLLKSLSKISSTEGF
YALWKGVSSVVLGAGPAHAIYFSVFESTKTFLVNRLTNSPHLNRIVTDENHPLIASCAGITGTTASDALMTPFDMLKQRM
QANAAYQDGKSTSVRLFKLASDIYKAEGLSAFYISYPTTLLTNIPFAALNFGFYEYSSSLLNPSHVYNPYLHCVSGGIAG
GIAAALTTPFDCIKTVLQTKGISQNQNFRHVTGFKSAAVALLKQEGAKAFWKGLKPRVIFNIPSTAISWTAYEMCKEVLI
RGKGL*

>Contig6-2081 size=11151 Comp(1133-2180) 39% to YPR128c over 296 aa
MSLSPIEKAASGALASAIANTLVYPLDLSKVLIQTQVKKNKPKSGSNGIPTPPSESDLEDSVYKQKVDEDNGLKYKNTID
VLTQIYKKKGILGWYHGLFSTVVGTAAQNFSYFYWYTIVKRVYANLYKHIPNHKPGTFTELFLGALAAAISQCFTMPIGV
ITTQQQTDKSHKNLFQLIQDILDQDGISGLWRGLRVSMVLCINPSITYGSYERLKQVLYGDKQFLKPLESFSLGVLAKSL
ATIATQPLIVSKAMIQKKSSPKKNNKATDKNTEEDDEEDIKFDHFTDALAYLWRTEKFRGLYKGIAPQLLKGVFVQGLLF
TFKDQLDILFLFLLSLIKNRSVLKK*

>Contig6-2498 size=78020 flx1 Comp(12302-13252) 35% to FLX1 over 300 aa
MELNTTDKQVHTRRFSSREIEVISGLLAGFSTTIVTHPLDVIKIRLQLSRDTPKTTHPLESIISVIKKINQDAKVAYKLN
HKPKAFNYLIQYYRGITPNLIGNISAWGIYFALYAEFKSKVKTNNTTMNYFASSVLAGLSTSIITNPLWVLKTRILGSSR
NESNAYRSVTDGIRQMLAKEGITSFWKGTIPSLFLVVQASLQITIYDHIKVYLLSPHHKSESIGATSHLSTWQYLYSSAS
SKIISMLILYPTQVVRSRLQYSQDSSLSIVSIVKELYYKEGGLKGFYKGIGANILRVLPATCVTFVAYENVKRYLM*

>Contig6-2321 size=24606 comp(7551-8750) 62% to RIM2 over 330 aa
MTEEEKKRLQVLERDAETAYPFLASDEKSSTFKTAEDLESGINPLVSIATTNESQQKLDNVSSISTTTNEKPKPKPKPWV
HFVAGGIGGTVGAVVTCPLDVVKTRLQSDVYHSMYNKIPKSGNPIIQAWQHLSETGSVLRGMYINEGASSLFKGLGPNLV
GVIPARSINFFTYGATKEFLLGNFSPTNSIQGPRQEETWIHLVSGINAGFVTSTATNPIWLIKTRLQLDKSKGKNYKNSW
DCFKHIIKHEGFTSLYRGLSASYLGGIESTIQWVLYEQMRMFINKRSLQIHGNDPSNKTTKDHILEWSARSGAAGLAKFM
ASLITYPHEVVRTRLRQAPLESTGKPKYTGLIQCFKLVIKEEGFGSMYGGLTPHLLRTVPNSIIMFGTWELVVRLLSEW*

>Contig6-1829 size=7298  45% to YDL119c over 315 aa Comp(2705-3793) 
= contig6-1946
MSLPPLSSPVPQVKTTQNGKSPDATVHLLAGAIAGLVSAVTLQPFDLLKTRLQQQQLTTKQEVRTTLTKELKKLTRVKDL
WRGTLPSTLRTSIGAGLYFTTLSKMRTSWGEYKQSKDSSINLKSNSSILPKLTAMENLTTGFIARGIVGYITMPITIIKT
RFESNLYNYNSMYE (phase 1 intron)
GGGGSWKNFFKGSVATLARDCPYAGLYVLTYEAFKNDLIPLIIPNSSLSLSSSSSLSSSSSLFVFNDNNRSSIINSTAAV
LAASTCTTITAPFDAIKTRLQLTNEEGGSMTTVLKKMLREDGGIKNLFRGLLLRLGRKGISAGISWCIYEELIKSNYFQS
KFL*

>Contig6-1946 size=10501 45% to YDL119c over 315 aa 3325-4428 (one intron) 
= contig6-1829
MSLPPLSSPVPQVKTTQNGKSPDATVHLLAGAIAGLVSAVTLQPFDLLKTRLQQQQLTTKQEVRTTLTKELKKLTRVKDL
WRGTLPSTLRTSIGAGLYFTTLSKMRTSWGEYKQSKDSSINLKSNSSILPKLTAMENLTTGFIARGIVGYITMPITIIKT
RFESNLYNYNSMYE (phase 1 intron)
GGGGSWKNFFKGSVATLARDCPYAGLYVLTYEAFKNDLIPLIIPNSSLSLSSSSSSSLSSSSSLFVFNDNNRSSIINSTA
AVLAASTCTTITAPFDAIKTRLQLTNEEGGSMTTVLKKMLREDGGIKNLFRGLLLRLGRKGISAGISWCIYEELIKSNYF
QSKFL*
 
>Contig6-2226 size=18678 15047-16126 33% to ORT1 over 278 aa 
MSSDLEQTNNPPMRGIPAITGPIDYTKAFHVFPKELQPFRNSIIAYGASLFSTLVGFPLDTVKTRMQTHKNFTSYFDCVK
KTYAKEGVRGFFRGIWAPIISTSLSKSLSVSLFTTVKPYTYGLLYETPWTKNIESSHPFLRNIPVCFISGLIAGGGVSLF
ACPFEFTKVYAQLEKLVASKSLK (this may be an intron ELSNLNNNGGTSSAQLTTKFN)
SVKTPSTAVIVKEILKYEGIKGLYSGYKYHLMRDSI
STGFYYSIYESMKWSINNFINKDPSISSPFSVLLAGGMSGVFSWVLIFPIDTTKSMVQKDAVTNILRRSHGLEPLPPKHR
KLQKFEKRAYRGLGISVTRSFIVNMVFFGVFELGMTYLA*

>Contig6-2238 size=17099 Comp(8878-10039) sequence may have an intron
32% to YFR045w over 306 amino acids
MPTNKPETTPGGENLLAALISCTTAAAFSATCTYPFDFIKTQQQLNNEKVMKKWNIPGNYPNSLAQLYKGGSALVLGSIV
KNGTRIIAYNWLTQFMSIDSHNGNNNKTTAPRIVIAGVMSGFIETLWLIPFENVKITMIQNQTLANELKRCKNLGYDITG
KVTHSPLTHHKSTKPI
(this seq. may be in an intron YLRQYVSPHAYLSSDVIDQYIKQKVRFGGVPIKDKALESLKFHYNKHPSLTLFGT)
VKEMYELKGLRAFTAGTFITFTRQIGISWVWLATYNATRQLIDPHNTNNEWFGHKHTMIQLVGLHFLSSMAVIMVTQPLD
VIKTHLQLKNGNLLYRDSLSTAYKLFLQQGPWALFKGAFPRFLKVLISGGLTATVYEYVERLVDVAGHQKIFSQE*

>Contig6-2363 size=26098 2394-3620 56% to YHR002w over 333 aa
MTQSNSDSSSTGDVPNINTLLIPSISKPVYSRIPIPGHLSNDQSTPIEDIKIIDKQSIDYIIRSGLAGGLAGSCAKTLVA
PLDRIKILFQTSNPEFIKYRGTFGGFIDAGKRIWKADGVMGLYQGNSVTLLRIFPYAAIKFVAYEQIRTFLIPNDSYETA
ARRFMAGSLSGLASVFFTYPLDLVRVRLAFETRNLS
(this seq may be in an intron HSQIHHHHKEFMAHRRGRIFSTVS)
LIYNENPPIKTTDPSWLKLMRKSFPSPINHLANFYRGFAPTILGMIPYAGVSFYTHDLLHDILRSKWLAKYTVQSTNHQ
NVVVKKKGKSSRESRAPLKAYAQLFAGGLAGLCSQTAAYPFEVIRRRMQVGGAINQGQFLSFKNTAKLIYRENGLQGFFV
GLSIGYMKVVPMVACSFFVYERMKKFLGI*

>Contig6-2093 size=12723 comp(278-1885) = Contig6-2390 size=28916
32% to YDR470c over 350 aa 
MSSSHPDTQVLRPYYDHDTFNAGYSVIFKKGVGIIDPKTNRPVTSNISEKLINQSIDENQGIIRNLFKHGGPVGINATSD
KNYVYDLEFNEYFESNNLIEVFKNLLGNFVRSYIKVLLTQPLEIVRLVLQVGKFNFSETASKTSKKLDLSKSKRLLSETE
DDTEATTEQDEHEYTRPQRSSIYDSDRDVDNEDEDEEPINYFQSQNEQQVWSGHEVGGFNKTATPTKQGKKSYRDDKKRL
RNNKIKPKSLHTADILTAIINKDGPFAVFRGINASFIYQTLSHTIEAWITGFASPFLGIPDPFFLDLTHSNDPFKSLWLS
VTACVLTGIVLMPLDLIRVKFMITQFNSKPLNENDALEEVTEEIVQSTRSVRESIRNFPVYYLLHPSTPIVFLTTLHQLS
TSIFRKMAPYILFIKFNIDSYSSPNIYTFVNLLSLILEFFIKLPVENLLRKQQVQFLLTPKREDTKKVITIEDPKKSLIV
EFNDLSKDIQDSTFWERLKQLGLFNGWRIGVLNVIGFWGYNIIKSDGSELKEERL*